Rorug06G0451600

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
58082300 .. 58090832
8533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0451600.1

Sequence Viewer

Length: 2676 bp
ATGTTCTTCCTGAAGCATATACATCTCTTCTCAAGCAATTACAGGACTCTCTTCCCCCTCGTCCTTTGCAAGAGGTTTCTCGAACTATACAGAAAGAGTTGGGGAAATCAATGGACGAGTTGTTCTCAGATTTTGTCAAAGTCCCTTTGGCAACTGCATCAATCTTATTGGTTCTGCACTCACTATATGCAGATAGCACAAGTCCATCGCGCAACCCTGCTTGATGGGCAGGAAGTAGTTGTTAAAGTTCAGCATGAGGGCATTAAGACAATCATATTGGAGGACTTGAAAAACGCAAAGTCAATTGTTGACTGGATAGCATGGGCAGAGCCTCAGTATAATTTTAATCCTATGATAGATGAATGGTGCAAAGAATGTCCGAATGAACTCGACTTCAATCATGAAGCTGAGAATACTCGAACAGTGTCTAAAAATCTTGGCTGCAGAACCAAACATGATGATAACCCAAGTGCCAATAAAGTGGATGTTTTGATACCAGAAGTTATTCAGTCAACAGAAAAAGTCCTCATTTCGGAGTTTATGGATGGCATTCGTTTAAATGACATAGAATCATTTGAAGCATTTGGTGTCAACAAACAAAAGGTTGTTGAAGAAATCACACGTGCATATGCCCACCAAATATATGTTGATGGATTTTTCAATGGTGACCCTCATCCTGGAAATTTTCTTGTGAGCAAGGAACCTCCACATCATCCAATTTTGCTGGACTTTGGACTTACTAAGAAATTATCAAGCTCTGTAAAACAAGCATTAGCGAAGATGTTCTTGGCTTCTGCTGAGGGGGACCATGTTGCTCTATTGTCGGCTTTTGCAGAAATGGGACTTAAGTTGCGCCTAGATATACCAGAGCAGGCAATGGAGATAACAACTGTATTCTTCCGTAGTACAACACCACCAAATGAGTCTCTTGAAACGATGAAAGCTCTGGTGGATCAAAGAGAAAAAAACATGAAGGTCATACAGGACAAGATGCAACTTAACCGAAAAGAGGTTAAACGCTTTAATCCTGTTGATGCATTTCCTGGTGATATTGTGATTTTTGCGCGAGTCCTCAATCTTCTTAGAGGGCTTTCTTCCGTAATGAACGTCCGCATTGTATATCTAGATATCATGAGACCATTTGCTGAATCCGTTTTACAGGGAAGCATTAATAGGGGACCAATGGTAAATGATCAGTGGATCTATGACACACCTGCCCTCTCTGATGTGGAGGCGAAGCTGAGGCGACTCCTACTTGAGCTGGGGAATGATAATAAAATTCTTGGAGTTCAGGTATGTGCCTACAAAGATGGAGAGGTTATTATTGACACTGCAGCTGGAGTGCTAGGTAGATATGATCCTCGCCCAGTTCAGCCTGACAGCCTTTTTCCAGTTTTTTCTGTGACAAAGGGTATAACAGCTGGAATGTTACATTGGCTGGTTGACAACGGAAAATTGAAGCTTGAGGAAAGTGTTGCAAGTATATGGCCAGAATTTGGATCAAACAGAAAGGATCTCATAAAGGTCCATCATGTGCTTAACCATACATCTGGATTGCACAATGCCTTGGCAGATATTAATAAAGAAAACCCTTTACTTATGTCTGACTGGGAGGAGTGTTTAAATCGCATTTCCATGTCAGTACCTGAGACTGAACCTGGCCAGGAGCAGTTGTATCACTATCTATCTTTTGGGTGGATATGTGGTGGAATCATTGAGCATGCATCAGGGAAAAAATTTAAGGAGATTCTGGAAGAAGCATTCATACACCCCCTACAAATTGAAGGGGAGTTATATATTGGAATCCCTCCAGGTGTGGAATCTCGACTGGCAACCCTAACCGCTGATGTAGACAATCTGAAGAAGGTCTCAGGGATAAGCGGTCGTAAAGATCTACCTTCCACTTTTCAGGGGGACAACCTTGTGCAAATTGTGAGCATGGTGCCTCCTCTATTTAACATGCTGAACATTCGTCGCAGCATCATTCCGGCAGCTAACGGACATTGCTCGGCCCGTGCTCTTGCACGTTATTATGCAGCCTTAGTTGATGGTGGTGTTGTTCCACCACCTCATCCCTCTTCCTCTAAACCAGCTCTGGGTAGCCACCCTCACATGCCCAAATTTCCTGTTGAATCGTCATCCAAAAAGCGAGGTAACAGAAGCAAGAAATTAGCTGCTGCTTTCAAGTTCAGGACTAAGAAATATGAGCAGGCCCCTACTAGCGATCCCGATATTGGTAGCCCCAGTAGAAACAATAGCAACAGTAGTGACATTAGTAATGCAACTGACCCCGGTTCCATTCCTCAAGAAGGTAGTGTCAATAAGATATTCAGCAACCCCAGAATCCATGATGCTTTCATGGGTGCTGGCGAATATGCAAATTTGGCCAAGCCAGATGGTACATTCGGACTTGGGTTCAAGAGATACCACTCGAAGGACGGGTCCCTTATTGGCTTTGGGCACTCGGGCATGGGTGGATCAACTGGCTTCTGTGATATCAAAAATAGGTTTGCTATTTCTGTAACCTTGAATAAAATGTCATTTGGTGCCGAGACTGGAAAAATCATCCATTTTGTTTGTTCGGAGTTAAACATCCCGGTGCCACAGGATTATTTGAGATTTGCAGAGATTCCCCCTGAGGGACAGTTGGATTCTGGAAGACCTTTGATAAACTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

891

Amino Acids

99.53

Weight (kDa)

6.76

Isoelectric Point (pI)

40.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 65 - 272 2.7e-51 ABC1 atypical kinase-like domain
Beta-lactamase PF00144 415 - 699 8.8e-42 Beta-lactamase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1222
Acc36I ACCTGC 1 cut(s) 1222
AccB1I GGYRCC 3 cut(s) 1942, 2546, 2599
AccB7I CCANNNNNTGG 1 cut(s) 1496
AccI GTMKAC 1 cut(s) 1851
AccII CGCG 2 cut(s) 210, 1066
AciI CCGC 3 cut(s) 1111, 1842, 1881
AclWI GGATC 7 cut(s) 960, 1208, 1352, 1507, 1521, 2219, 2485
AcoI YGGCCR 3 cut(s) 1487, 1660, 2385
AcsI RAATTY 6 cut(s) 682, 1278, 1493, 1736, 2120, 2380
AcuI CTGAAG 2 cut(s) 32, 1880
AcvI CACGTG 1 cut(s) 623
AfaI GTAC 3 cut(s) 907, 1644, 2401
AfiI CCNNNNNNNGG 9 cut(s) 532, 677, 1009, 1496, 2096, 2234, 2309, 2434, 2639
AflII CTTAAG 1 cut(s) 845
AflIII ACRYGT 1 cut(s) 620
AjnI CCWGG 5 cut(s) 676, 1042, 1657, 1662, 1810
AjuI GAANNNNNNNTTGG 4 cut(s) 770, 802, 1417, 1449
AloI GAACNNNNNNTCC 2 cut(s) 106, 138
Alw21I GWGCWC 1 cut(s) 2020
Alw26I GTCTC 5 cut(s) 930, 1129, 1643, 1873, 2546
AlwI GGATC 7 cut(s) 960, 1208, 1352, 1507, 1521, 2219, 2485
AlwNI CAGNNNCTG 1 cut(s) 1646
Ama87I CYCGRG 1 cut(s) 2464
AoxI GGCC 5 cut(s) 1487, 1660, 2010, 2211, 2385
ApeKI GCWGC 7 cut(s) 441, 1334, 1977, 1991, 2036, 2174, 2177
ApoI RAATTY 6 cut(s) 682, 1278, 1493, 1736, 2120, 2380
ArsI GACNNNNNNTTYG 2 cut(s) 2426, 2458
AseI ATTAAT 2 cut(s) 1170, 1578
Asp700I GAANNNNTTC 2 cut(s) 504, 782
AspLEI GCGC 3 cut(s) 212, 855, 1066
AspS9I GGNCC 6 cut(s) 805, 1178, 1525, 2011, 2212, 2442
AsuC2I CCSGG 2 cut(s) 2292, 2597
AsuHPI GGTGA 2 cut(s) 677, 1058
AvaI CYCGRG 1 cut(s) 2464
AvaII GGWCC 4 cut(s) 805, 1178, 1525, 2442
AxyI CCTNAGG 1 cut(s) 2637
BaeGI GKGCMC 1 cut(s) 2463
BalI TGGCCA 3 cut(s) 1489, 1662, 2387
BanI GGYRCC 3 cut(s) 1942, 2546, 2599
BarI GAAGNNNNNNTAC 2 cut(s) 1749, 1781
BbrPI CACGTG 1 cut(s) 623
BbsI GAAGAC 1 cut(s) 2665
Bbv12I GWGCWC 1 cut(s) 2020
BbvCI CCTCAGC 2 cut(s) 798, 1241
BbvI GCAGC 7 cut(s) 428, 1346, 1989, 2003, 2048, 2161, 2164
BccI CCATC 8 cut(s) 213, 218, 539, 644, 1304, 1536, 2042, 2390
BciT130I CCWGG 5 cut(s) 678, 1044, 1659, 1664, 1812
BclI TGATCA 1 cut(s) 1192
BcnI CCSGG 2 cut(s) 2292, 2597
BcoDI GTCTC 5 cut(s) 930, 1129, 1643, 1873, 2546
BfaI CTAG 4 cut(s) 857, 1124, 1346, 2220
BfmI CTRYAG 2 cut(s) 442, 1332
BfrI CTTAAG 1 cut(s) 845
BfuAI ACCTGC 1 cut(s) 1222
BglII AGATCT 1 cut(s) 1891
BisI GCNGC 7 cut(s) 442, 1335, 1978, 1992, 2037, 2175, 2178
BlsI GCNGC 7 cut(s) 443, 1336, 1979, 1993, 2038, 2176, 2179
Bme1390I CCNGG 7 cut(s) 678, 1044, 1659, 1664, 1812, 2292, 2597
Bme18I GGWCC 4 cut(s) 805, 1178, 1525, 2442
BmeT110I CYCGRG 1 cut(s) 2464
BmgT120I GGNCC 6 cut(s) 805, 1178, 1525, 2011, 2212, 2442
BmrFI CCNGG 7 cut(s) 678, 1044, 1659, 1664, 1812, 2292, 2597
BmrI ACTGGG 3 cut(s) 1361, 1618, 2238
BmsI GCATC 6 cut(s) 166, 981, 1024, 1733, 1989, 2341
BmuI ACTGGG 3 cut(s) 1361, 1618, 2238
BpiI GAAGAC 1 cut(s) 2665
BplI GAGNNNNNCTC 2 cut(s) 109, 141
BpmI CTGGAG 2 cut(s) 1359, 1794
Bpu10I CCTNAGC 2 cut(s) 798, 1241
BpuEI CTTGAG 4 cut(s) 16, 1277, 1484, 2289
BpuMI CCSGG 2 cut(s) 2292, 2597
BsaAI YACGTR 1 cut(s) 623
BsaI GGTCTC 2 cut(s) 1129, 1873
BsaJI CCNNGG 2 cut(s) 1566, 2290
BsaXI ACNNNNNCTCC 4 cut(s) 1278, 1308, 1658, 1688
Bsc4I CCNNNNNNNGG 9 cut(s) 532, 677, 1009, 1496, 2096, 2234, 2309, 2434, 2639
Bse1I ACTGG 8 cut(s) 317, 1367, 1391, 1613, 1833, 2244, 2488, 2560
Bse21I CCTNAGG 1 cut(s) 2637
Bse3DI GCAATG 2 cut(s) 882, 2002
BseBI CCWGG 5 cut(s) 678, 1044, 1659, 1664, 1812
BseDI CCNNGG 2 cut(s) 1566, 2290
BseGI GGATG 8 cut(s) 490, 550, 673, 712, 2071, 2138, 2565, 2592
BseLI CCNNNNNNNGG 9 cut(s) 532, 677, 1009, 1496, 2096, 2234, 2309, 2434, 2639
BseMI GCAATG 2 cut(s) 882, 2002
BseMII CTCAG 8 cut(s) 140, 347, 399, 789, 1232, 1638, 1884, 2628
BseNI ACTGG 8 cut(s) 317, 1367, 1391, 1613, 1833, 2244, 2488, 2560
BseRI GAGGAG 2 cut(s) 1628, 1938
BseSI GKGCMC 1 cut(s) 2463
BseXI GCAGC 7 cut(s) 428, 1346, 1989, 2003, 2048, 2161, 2164
BseYI CCCAGC 1 cut(s) 1261
BsgI GTGCAG 1 cut(s) 160
Bsh1236I CGCG 2 cut(s) 210, 1066
Bsh1285I CGRYCG 1 cut(s) 1885
BshFI GGCC 5 cut(s) 1489, 1662, 2012, 2213, 2387
BshNI GGYRCC 3 cut(s) 1942, 2546, 2599
BsiEI CGRYCG 1 cut(s) 1885
BsiHKAI GWGCWC 1 cut(s) 2020
BsiHKCI CYCGRG 1 cut(s) 2464
BsiSI CCGG 3 cut(s) 1988, 2292, 2597
BslFI GGGAC 7 cut(s) 127, 818, 855, 1191, 1928, 2428, 2655
BslI CCNNNNNNNGG 9 cut(s) 532, 677, 1009, 1496, 2096, 2234, 2309, 2434, 2639
BsmAI GTCTC 5 cut(s) 930, 1129, 1643, 1873, 2546
BsmFI GGGAC 7 cut(s) 127, 818, 855, 1191, 1928, 2428, 2655
BsmI GAATGC 2 cut(s) 549, 1760
BsnI GGCC 5 cut(s) 1489, 1662, 2012, 2213, 2387
Bso31I GGTCTC 2 cut(s) 1129, 1873
BsoBI CYCGRG 1 cut(s) 2464
Bsp1286I GDGCHC 2 cut(s) 2020, 2463
Bsp143I GATC 9 cut(s) 952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
BspACI CCGC 3 cut(s) 1111, 1842, 1881
BspANI GGCC 5 cut(s) 1489, 1662, 2012, 2213, 2387
BspCNI CTCAG 8 cut(s) 139, 346, 400, 790, 1233, 1639, 1883, 2629
BspFNI CGCG 2 cut(s) 210, 1066
BspHI TCATGA 2 cut(s) 400, 1131
BspMAI CTGCAG 2 cut(s) 446, 1336
BspMI ACCTGC 1 cut(s) 1222
BspPI GGATC 7 cut(s) 960, 1208, 1352, 1507, 1521, 2219, 2485
BspT107I GGYRCC 3 cut(s) 1942, 2546, 2599
BspTI CTTAAG 1 cut(s) 845
BspTNI GGTCTC 2 cut(s) 1129, 1873
BsrDI GCAATG 2 cut(s) 882, 2002
BsrI ACTGG 8 cut(s) 317, 1367, 1391, 1613, 1833, 2244, 2488, 2560
BssECI CCNNGG 2 cut(s) 1566, 2290
BssMI GATC 9 cut(s) 952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
BssT1I CCWWGG 1 cut(s) 1566
Bst2UI CCWGG 5 cut(s) 678, 1044, 1659, 1664, 1812
Bst4CI ACNGT 4 cut(s) 424, 892, 2264, 2646
Bst6I CTCTTC 3 cut(s) 32, 56, 2083
BstAFI CTTAAG 1 cut(s) 845
BstBAI YACGTR 1 cut(s) 623
BstC8I GCNNGC 4 cut(s) 873, 1722, 2211, 2368
BstEII GGTNACC 1 cut(s) 665
BstENI CCTNNNNNAGG 1 cut(s) 2307
BstF5I GGATG 8 cut(s) 490, 550, 673, 712, 2071, 2138, 2565, 2592
BstFNI CGCG 2 cut(s) 210, 1066
BstHHI GCGC 3 cut(s) 212, 855, 1066
BstKTI GATC 9 cut(s) 955, 1195, 1203, 1360, 1502, 1516, 1894, 2227, 2480
BstMAI GTCTC 5 cut(s) 930, 1129, 1643, 1873, 2546
BstMBI GATC 9 cut(s) 952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
BstMCI CGRYCG 1 cut(s) 1885
BstMWI GCNNNNNNNGC 2 cut(s) 226, 2384
BstNI CCWGG 5 cut(s) 678, 1044, 1659, 1664, 1812
BstNSI RCATGY 3 cut(s) 1724, 1963, 2116
BstPI GGTNACC 1 cut(s) 665
BstSCI CCNGG 7 cut(s) 676, 1042, 1657, 1662, 1810, 2290, 2595
BstSFI CTRYAG 2 cut(s) 442, 1332
BstSLI GKGCMC 1 cut(s) 2463
BstUI CGCG 2 cut(s) 210, 1066
BstV1I GCAGC 7 cut(s) 428, 1346, 1989, 2003, 2048, 2161, 2164
BstV2I GAAGAC 1 cut(s) 2665
BstX2I RGATCY 3 cut(s) 1200, 1513, 1891
BstXI CCANNNNNNTGG 2 cut(s) 481, 1550
BstYI RGATCY 3 cut(s) 1200, 1513, 1891
Bsu36I CCTNAGG 1 cut(s) 2637
BsuRI GGCC 5 cut(s) 1489, 1662, 2012, 2213, 2387
BtgZI GCGATG 1 cut(s) 191
BtsCI GGATG 8 cut(s) 490, 550, 673, 712, 2071, 2138, 2565, 2592
BtsI GCAGTG 1 cut(s) 1329
BtsIMutI CAGTG 3 cut(s) 429, 1202, 1329
BveI ACCTGC 1 cut(s) 1222
Cac8I GCNNGC 4 cut(s) 873, 1722, 2211, 2368
CaiI CAGNNNCTG 1 cut(s) 1646
CciI TCATGA 2 cut(s) 400, 1131
CfoI GCGC 3 cut(s) 212, 855, 1066
Cfr13I GGNCC 6 cut(s) 805, 1178, 1525, 2011, 2212, 2442
Csp6I GTAC 3 cut(s) 906, 1643, 2400
CviQI GTAC 3 cut(s) 906, 1643, 2400
DpnI GATC 9 cut(s) 954, 1194, 1202, 1359, 1501, 1515, 1893, 2226, 2479
DpnII GATC 9 cut(s) 952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
DraI TTTAAA 2 cut(s) 558, 1623
EaeI YGGCCR 3 cut(s) 1487, 1660, 2385
Eam1104I CTCTTC 3 cut(s) 32, 56, 2083
EarI CTCTTC 3 cut(s) 32, 56, 2083
Eco130I CCWWGG 1 cut(s) 1566
Eco31I GGTCTC 2 cut(s) 1129, 1873
Eco32I GATATC 2 cut(s) 1129, 2497
Eco47I GGWCC 4 cut(s) 805, 1178, 1525, 2442
Eco57I CTGAAG 2 cut(s) 32, 1880
Eco72I CACGTG 1 cut(s) 623
Eco81I CCTNAGG 1 cut(s) 2637
Eco88I CYCGRG 1 cut(s) 2464
Eco91I GGTNACC 1 cut(s) 665
EcoNI CCTNNNNNAGG 1 cut(s) 2307
EcoO109I RGGNCCY 2 cut(s) 2212, 2442
EcoO65I GGTNACC 1 cut(s) 665
EcoRII CCWGG 5 cut(s) 676, 1042, 1657, 1662, 1810
EcoRV GATATC 2 cut(s) 1129, 2497
EcoT14I CCWWGG 1 cut(s) 1566
EcoT22I ATGCAT 2 cut(s) 1039, 1726
ErhI CCWWGG 1 cut(s) 1566
FalI AAGNNNNNCTT 2 cut(s) 770, 802
FaqI GGGAC 7 cut(s) 127, 818, 855, 1191, 1928, 2428, 2655
FauNDI CATATG 1 cut(s) 628
FbaI TGATCA 1 cut(s) 1192
FblI GTMKAC 1 cut(s) 1851
Fnu4HI GCNGC 7 cut(s) 442, 1335, 1978, 1992, 2037, 2175, 2178
FokI GGATG 8 cut(s) 497, 557, 660, 699, 2058, 2125, 2552, 2579
Fsp4HI GCNGC 7 cut(s) 442, 1335, 1978, 1992, 2037, 2175, 2178
FspBI CTAG 4 cut(s) 857, 1124, 1346, 2220
GlaI GCGC 3 cut(s) 211, 854, 1065
GluI GCNGC 7 cut(s) 442, 1335, 1978, 1992, 2037, 2175, 2178
GsaI CCCAGC 1 cut(s) 1265
GsuI CTGGAG 2 cut(s) 1359, 1794
HaeIII GGCC 5 cut(s) 1489, 1662, 2012, 2213, 2387
HapII CCGG 3 cut(s) 1988, 2292, 2597
HhaI GCGC 3 cut(s) 212, 855, 1066
Hin6I GCGC 3 cut(s) 210, 853, 1064
HinP1I GCGC 3 cut(s) 210, 853, 1064
HincII GTYRAC 4 cut(s) 310, 513, 592, 1444
HindII GTYRAC 4 cut(s) 310, 513, 592, 1444
HindIII AAGCTT 1 cut(s) 1460
HpaII CCGG 3 cut(s) 1988, 2292, 2597
HphI GGTGA 2 cut(s) 677, 1058
Hpy166II GTNNAC 5 cut(s) 310, 513, 592, 1444, 1852
Hpy188I TCNGA 8 cut(s) 129, 381, 535, 1225, 1606, 1860, 2408, 2584
Hpy8I GTNNAC 5 cut(s) 310, 513, 592, 1444, 1852
Hpy99I CGWCG 1 cut(s) 1977
HpyAV CCTTC 6 cut(s) 967, 1778, 1858, 1908, 2303, 2428
HpyCH4III ACNGT 4 cut(s) 424, 892, 2264, 2646
HpyCH4IV ACGT 3 cut(s) 622, 1107, 2026
HpyF10VI GCNNNNNNNGC 2 cut(s) 226, 2384
HpySE526I ACGT 3 cut(s) 622, 1107, 2026
HspAI GCGC 3 cut(s) 210, 853, 1064
KflI GGGWCCC 1 cut(s) 2442
Ksp22I TGATCA 1 cut(s) 1192
Kzo9I GATC 9 cut(s) 952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
LmnI GCTCC 1 cut(s) 1666
Lsp1109I GCAGC 7 cut(s) 428, 1346, 1989, 2003, 2048, 2161, 2164
LweI GCATC 6 cut(s) 166, 981, 1024, 1733, 1989, 2341
MaeI CTAG 4 cut(s) 857, 1124, 1346, 2220
MaeII ACGT 3 cut(s) 622, 1107, 2026
MaeIII GTNAC 6 cut(s) 665, 1402, 1428, 2153, 2267, 2521
MalI GATC 9 cut(s) 954, 1194, 1202, 1359, 1501, 1515, 1893, 2226, 2479
MboI GATC 9 cut(s) 952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
MfeI CAATTG 1 cut(s) 303
MflI RGATCY 3 cut(s) 1200, 1513, 1891
MhlI GDGCHC 2 cut(s) 2020, 2463
MlsI TGGCCA 3 cut(s) 1489, 1662, 2387
MluNI TGGCCA 3 cut(s) 1489, 1662, 2387
MlyI GAGTC 4 cut(s) 40, 932, 1077, 1242
MmeI TCCRAC 1 cut(s) 2628
Mox20I TGGCCA 3 cut(s) 1489, 1662, 2387
Mph1103I ATGCAT 2 cut(s) 1039, 1726
MroXI GAANNNNTTC 2 cut(s) 504, 782
MscI TGGCCA 3 cut(s) 1489, 1662, 2387
MslI CAYNNNNRTG 2 cut(s) 1634, 2597
Msp20I TGGCCA 3 cut(s) 1489, 1662, 2387
MspA1I CMGCKG 3 cut(s) 1337, 1421, 1844
MspCI CTTAAG 1 cut(s) 845
MspI CCGG 3 cut(s) 1988, 2292, 2597
MspR9I CCNGG 7 cut(s) 678, 1044, 1659, 1664, 1812, 2292, 2597
MunI CAATTG 1 cut(s) 303
Mva1269I GAATGC 2 cut(s) 549, 1760
MvaI CCWGG 5 cut(s) 678, 1044, 1659, 1664, 1812
MvnI CGCG 2 cut(s) 210, 1066
MwoI GCNNNNNNNGC 2 cut(s) 226, 2384
NciI CCSGG 2 cut(s) 2292, 2597
NdeI CATATG 1 cut(s) 628
NdeII GATC 9 cut(s) 952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
NmeAIII GCCGAG 2 cut(s) 1988, 2575
NmuCI GTSAC 3 cut(s) 665, 1402, 2267
NsiI ATGCAT 2 cut(s) 1039, 1726
NspI RCATGY 3 cut(s) 1724, 1963, 2116
PaeI GCATGC 1 cut(s) 1724
PagI TCATGA 2 cut(s) 400, 1131
PaqCI CACCTGC 1 cut(s) 1222
PctI GAATGC 2 cut(s) 549, 1760
PdmI GAANNNNTTC 2 cut(s) 504, 782
PflMI CCANNNNNTGG 1 cut(s) 1496
PfoI TCCNGGA 1 cut(s) 676
PkrI GCNGC 7 cut(s) 443, 1336, 1979, 1993, 2038, 2176, 2179
PleI GAGTC 4 cut(s) 40, 931, 1076, 1242
PmaCI CACGTG 1 cut(s) 623
PmlI CACGTG 1 cut(s) 623
PpsI GAGTC 4 cut(s) 40, 931, 1076, 1242
Ppu21I YACGTR 1 cut(s) 623
PpuMI RGGWCCY 1 cut(s) 2442
PshBI ATTAAT 2 cut(s) 1170, 1578
Psp5II RGGWCCY 1 cut(s) 2442
Psp6I CCWGG 5 cut(s) 676, 1042, 1657, 1662, 1810
PspCI CACGTG 1 cut(s) 623
PspEI GGTNACC 1 cut(s) 665
PspFI CCCAGC 1 cut(s) 1261
PspGI CCWGG 5 cut(s) 676, 1042, 1657, 1662, 1810
PspPI GGNCC 6 cut(s) 805, 1178, 1525, 2011, 2212, 2442
PspPPI RGGWCCY 1 cut(s) 2442
PstI CTGCAG 2 cut(s) 446, 1336
PstNI CAGNNNCTG 1 cut(s) 1646
PsuI RGATCY 3 cut(s) 1200, 1513, 1891
PvuII CAGCTG 2 cut(s) 1337, 1421
RsaI GTAC 3 cut(s) 907, 1644, 2401
RsaNI GTAC 3 cut(s) 906, 1643, 2400
RseI CAYNNNNRTG 2 cut(s) 1634, 2597
SatI GCNGC 7 cut(s) 442, 1335, 1978, 1992, 2037, 2175, 2178
Sau3AI GATC 9 cut(s) 952, 1192, 1200, 1357, 1499, 1513, 1891, 2224, 2477
Sau96I GGNCC 6 cut(s) 805, 1178, 1525, 2011, 2212, 2442
SchI GAGTC 4 cut(s) 40, 932, 1077, 1242
ScrFI CCNGG 7 cut(s) 678, 1044, 1659, 1664, 1812, 2292, 2597
SduI GDGCHC 2 cut(s) 2020, 2463
SfaNI GCATC 6 cut(s) 166, 981, 1024, 1733, 1989, 2341
SfcI CTRYAG 2 cut(s) 442, 1332
SinI GGWCC 4 cut(s) 805, 1178, 1525, 2442
SmiMI CAYNNNNRTG 2 cut(s) 1634, 2597
SmlI CTYRAG 5 cut(s) 31, 845, 1256, 1463, 2304
SmoI CTYRAG 5 cut(s) 31, 845, 1256, 1463, 2304
SphI GCATGC 1 cut(s) 1724
SsiI CCGC 3 cut(s) 1111, 1842, 1881
SspMI CTAG 4 cut(s) 857, 1124, 1346, 2220
StyD4I CCNGG 7 cut(s) 676, 1042, 1657, 1662, 1810, 2290, 2595
StyI CCWWGG 1 cut(s) 1566
TaaI ACNGT 4 cut(s) 424, 892, 2264, 2646
TaiI ACGT 3 cut(s) 625, 1110, 2029
TaqI TCGA 5 cut(s) 81, 390, 418, 1825, 2432
TatI WGTACW 1 cut(s) 905
TscAI CASTG 3 cut(s) 429, 1202, 1336
TseFI GTSAC 3 cut(s) 665, 1402, 2267
TseI GCWGC 7 cut(s) 441, 1334, 1977, 1991, 2036, 2174, 2177
Tsp45I GTSAC 3 cut(s) 665, 1402, 2267
TspDTI ATGAA 8 cut(s) 375, 399, 417, 953, 986, 1118, 1753, 2347
TspGWI ACGGA 5 cut(s) 890, 1087, 1141, 1464, 2013
TspRI CASTG 3 cut(s) 429, 1202, 1336
Van91I CCANNNNNTGG 1 cut(s) 1496
Vha464I CTTAAG 1 cut(s) 845
VpaK11BI GGWCC 4 cut(s) 805, 1178, 1525, 2442
VspI ATTAAT 2 cut(s) 1170, 1578
XagI CCTNNNNNAGG 1 cut(s) 2307
XapI RAATTY 6 cut(s) 682, 1278, 1493, 1736, 2120, 2380
XbaI TCTAGA 1 cut(s) 1123
XceI RCATGY 3 cut(s) 1724, 1963, 2116
XmiI GTMKAC 1 cut(s) 1851
XmnI GAANNNNTTC 2 cut(s) 504, 782
XspI CTAG 4 cut(s) 857, 1124, 1346, 2220
Zsp2I ATGCAT 2 cut(s) 1039, 1726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.