RLG00000010934

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000203
Physical Location & Seq
Forward (+)
5499948 .. 5501968
2021 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010934

Sequence Viewer

Length: 1926 bp
ATGGACATTATACAAGCATTGGTACAACCATTGGCAGAATGGGCAGTGAGACCAATTCGGCGACAGTTGAGTTATGTGTTTCACTACAAGAGCAACATTGAGCATCTCAACGAACAGGTTCTGCTGCTGGGTGACAAAAGAGGAGGAGTAAACCTGGACGTGACAGATGCGAGACGAGCTCTACAGGAGATTAGTCCCGGAGTTGATCGCTGGCTGGGTGATTGTCGTCATTCTTTGGGAAGGAAAGCTAAGAAGATGACTGAGAAGGTGGATAATCTTCTTGCTAATGAACCCAGGGCTATAGCGCATCCTGCTGCTCCCCCAAAGTTGGAATTCAAACCCACAGAGCACTCTACTCTGCCCGGAACCAACTTCCATGAAGGTGCCAGCTCCTCAGGAACATCAACCCAAGAACAGCCACCTGCATCTGAAGGAAATAATATTAATTTTGATTCAAGAAGATCAACCATTAGAGATGTGATGGAAGCTCTCAAGGGGAATCAATTCAATCCTATTATCATATGCGGCATGGGTGGCATCGGGAAGACGACATTGATGGGGCAAGTCTTTGAGAAAGCAAAGGAAGAAGGTCTGTTCGATGAGTATACAAAGGCAACCTTAGCTCTTGACAAAGCTCCTGACGTGATTCAGATTCAAGGCGAACTTGCAGAATATCTAGGCAAGAACATCCTTGAGGATGAAAAAGAGAGAGGTCCAAGAGCAAGTAAGCTGCGTGCAAGATTATCCCAAGGCAGCAAGAAGATCCTTGTAATGTTAGACAATGTTTCCACAACAACCCCAGACTTTTTGTGGGATATAGGGATTCCTCCTAGTTGTAAGCTTTTGGTGACATCAAGACAACAAGATCTATTCAAGGACATGGACACAAGAAAGAATTTCCCCATTCATGGTTTGCCGGATACTGATGCATGGAGTCTGTTTAAGAAGACAGCAGGAATTTCTATCGAATCTGATCGCGAGTTAGAAGTTGTAGCAAAAGATGTTTTGAAGGAATGTGCTGGGTTGCCCATTGCAATTTCAACTGTTGGAACGGCACTAAAAGGTGAAAACATTGCAGTTTGGACGAATGCACTAAGGGAACTGAAGAAGGCTAATCCAGAAAACGTTCCAGGAGTGATAGAACATGTGTATGGCAAAATCAAGTTCAGCTATAAATGTTTACCAAGCGAGCAAGCCAAATCATGTTTTTTGTTGTGTTGCATATTTGAAGAGAGCGCTTATATCGAGATAGAAGATTTGGTTAGATATGGGCTCGGTCTCAAGCTCTTTAAAGGCATTGATTCAATGGTTGAAGGAAGAAACTGTATAGAAACATTGGTTCAGACACTCAAATATCGCTTTTTATTGTTAGGGAGTGATGTGCCAGAGCGTGTGAGAATGCATGATATGGTGCGTGATGTTGCCGTGCATATAGCTTCTGAAGAGCTTGTAGAAAAGAAAAATGATGGGGTTGAAAAGAGAATTGTGGTGAGAGACAAAGCAGAAACTGTGAAGTTGATGGATTGGCCTAAGGATAGTGATTCTGAGCGATCTATTTATTGCAGTTCACTGAGTATCAATGGACTTTGTCAACTTTTACTGTTGAGAAATCTATTTGGATTTCTAATATTGGAGCCTCCACCAACAATTTTCAATATAATGGAAGATCTCAAGGTTCTAGCAATAATTGAGAAGGGCAAGAGTACTTATAGGTGGTCTACAGATACCAGAATGCATCTGCTGTCACTAGTGCCATCACTTGCAGTTTTGAAAAATCTTCAAACACTGCGTCTAGAGACGTGCAATCTGGAGTGTGATGTATCTGTCATTGGGGAGCTAAGGACACTCATGATACTCAGTTTGCGTGAATCCGACATCAAGCAATTGCCTTTATCTAATCTGAGATTGCTTGATTTGTCGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

642

Amino Acids

71.79

Weight (kDa)

6.33

Isoelectric Point (pI)

44.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 155 - 318 2.1e-18 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 430
Acc36I ACCTGC 1 cut(s) 430
AccB1I GGYRCC 1 cut(s) 383
AccI GTMKAC 2 cut(s) 605, 1718
AccII CGCG 1 cut(s) 978
AciI CCGC 1 cut(s) 525
AclI AACGTT 1 cut(s) 1125
AclWI GGATC 1 cut(s) 757
AcsI RAATTY 3 cut(s) 332, 895, 957
AcuI CTGAAG 3 cut(s) 450, 1124, 1461
AfaI GTAC 2 cut(s) 24, 1705
AfeI AGCGCT 1 cut(s) 1237
AfiI CCNNNNNNNGG 2 cut(s) 328, 908
AflIII ACRYGT 1 cut(s) 1144
AhlI ACTAGT 1 cut(s) 1747
AjiI CACGTC 3 cut(s) 160, 643, 1800
AjnI CCWGG 3 cut(s) 153, 293, 1129
Alw21I GWGCWC 2 cut(s) 181, 351
Alw26I GTCTC 5 cut(s) 43, 166, 1283, 1488, 1790
AlwI GGATC 1 cut(s) 757
AlwNI CAGNNNCTG 2 cut(s) 121, 1508
Aor51HI AGCGCT 1 cut(s) 1237
AoxI GGCC 1 cut(s) 1526
ApeKI GCWGC 4 cut(s) 124, 314, 730, 753
ApoI RAATTY 3 cut(s) 332, 895, 957
ArsI GACNNNNNNTTYG 2 cut(s) 1774, 1806
AseI ATTAAT 1 cut(s) 444
Asp700I GAANNNNTTC 3 cut(s) 117, 503, 1125
AspLEI GCGC 2 cut(s) 307, 1238
AspS9I GGNCC 1 cut(s) 713
AsuC2I CCSGG 2 cut(s) 198, 363
AsuHPI GGTGA 5 cut(s) 143, 230, 859, 1076, 1501
AvaII GGWCC 1 cut(s) 713
AxyI CCTNAGG 2 cut(s) 394, 1530
BanI GGYRCC 1 cut(s) 383
BanII GRGCYC 2 cut(s) 181, 1275
BbsI GAAGAC 2 cut(s) 551, 953
Bbv12I GWGCWC 2 cut(s) 181, 351
BbvI GCAGC 4 cut(s) 111, 301, 717, 765
BccI CCATC 5 cut(s) 475, 550, 1460, 1513, 1762
BceAI ACGGC 2 cut(s) 1068, 1409
BciT130I CCWGG 3 cut(s) 155, 295, 1131
BciVI GTATCC 1 cut(s) 913
BcnI CCSGG 2 cut(s) 198, 363
BcoDI GTCTC 5 cut(s) 43, 166, 1283, 1488, 1790
BcuI ACTAGT 1 cut(s) 1747
BfaI CTAG 5 cut(s) 677, 831, 1679, 1748, 1793
BfmI CTRYAG 3 cut(s) 182, 300, 1719
BfoI RGCGCY 1 cut(s) 1239
BfuAI ACCTGC 1 cut(s) 430
BfuI GTATCC 1 cut(s) 913
BglII AGATCT 2 cut(s) 865, 1666
BisI GCNGC 5 cut(s) 125, 315, 526, 731, 754
BlsI GCNGC 5 cut(s) 126, 316, 527, 732, 755
BmcAI AGTACT 1 cut(s) 1705
Bme1390I CCNGG 5 cut(s) 155, 198, 295, 363, 1131
Bme18I GGWCC 1 cut(s) 713
BmgBI CACGTC 3 cut(s) 160, 643, 1800
BmgT120I GGNCC 1 cut(s) 713
BmiI GGNNCC 3 cut(s) 367, 385, 1635
BmrFI CCNGG 5 cut(s) 155, 198, 295, 363, 1131
BmsI GCATC 7 cut(s) 112, 157, 316, 434, 546, 916, 1744
BpiI GAAGAC 2 cut(s) 551, 953
BplI GAGNNNNNCTC 2 cut(s) 163, 195
BpmI CTGGAG 1 cut(s) 1829
Bpu10I CCTNAGC 2 cut(s) 619, 1838
BpuEI CTTGAG 4 cut(s) 476, 713, 1265, 1655
BpuMI CCSGG 2 cut(s) 198, 363
BsaI GGTCTC 2 cut(s) 43, 1283
BsaJI CCNNGG 3 cut(s) 293, 294, 748
Bsc4I CCNNNNNNNGG 2 cut(s) 328, 908
Bse21I CCTNAGG 2 cut(s) 394, 1530
Bse3DI GCAATG 2 cut(s) 1029, 1071
BseBI CCWGG 3 cut(s) 155, 295, 1131
BseDI CCNNGG 3 cut(s) 293, 294, 748
BseGI GGATG 3 cut(s) 307, 687, 703
BseLI CCNNNNNNNGG 2 cut(s) 328, 908
BseMI GCAATG 2 cut(s) 1029, 1071
BseMII CTCAG 6 cut(s) 252, 408, 1536, 1562, 1870, 1892
BseRI GAGGAG 3 cut(s) 156, 159, 382
BseXI GCAGC 4 cut(s) 111, 301, 717, 765
BseYI CCCAGC 3 cut(s) 127, 214, 1019
Bsh1236I CGCG 1 cut(s) 978
BshFI GGCC 1 cut(s) 1528
BshNI GGYRCC 1 cut(s) 383
BsiHKAI GWGCWC 2 cut(s) 181, 351
BsiSI CCGG 3 cut(s) 198, 363, 917
BslFI GGGAC 1 cut(s) 180
BslI CCNNNNNNNGG 2 cut(s) 328, 908
BsmAI GTCTC 5 cut(s) 43, 166, 1283, 1488, 1790
BsmBI CGTCTC 2 cut(s) 166, 1790
BsmFI GGGAC 1 cut(s) 180
BsmI GAATGC 3 cut(s) 1093, 1404, 1737
BsnI GGCC 1 cut(s) 1528
Bso31I GGTCTC 2 cut(s) 43, 1283
Bsp1286I GDGCHC 3 cut(s) 181, 351, 1275
Bsp143I GATC 7 cut(s) 205, 461, 762, 865, 973, 1550, 1666
Bsp68I TCGCGA 1 cut(s) 978
BspACI CCGC 1 cut(s) 525
BspANI GGCC 1 cut(s) 1528
BspCNI CTCAG 6 cut(s) 253, 407, 1537, 1563, 1869, 1893
BspFNI CGCG 1 cut(s) 978
BspHI TCATGA 1 cut(s) 1848
BspLI GGNNCC 3 cut(s) 367, 385, 1635
BspMI ACCTGC 1 cut(s) 430
BspPI GGATC 1 cut(s) 757
BspQI GCTCTTC 1 cut(s) 1437
BspT107I GGYRCC 1 cut(s) 383
BspTNI GGTCTC 2 cut(s) 43, 1283
BsrDI GCAATG 2 cut(s) 1029, 1071
BssECI CCNNGG 3 cut(s) 293, 294, 748
BssMI GATC 7 cut(s) 205, 461, 762, 865, 973, 1550, 1666
BssNAI GTATAC 1 cut(s) 606
BssT1I CCWWGG 1 cut(s) 748
Bst1107I GTATAC 1 cut(s) 606
Bst2UI CCWGG 3 cut(s) 155, 295, 1131
Bst4CI ACNGT 5 cut(s) 66, 1045, 1325, 1510, 1602
Bst6I CTCTTC 2 cut(s) 1224, 1437
BstC8I GCNNGC 5 cut(s) 212, 388, 735, 1190, 1194
BstF5I GGATG 3 cut(s) 307, 687, 703
BstFNI CGCG 1 cut(s) 978
BstH2I RGCGCY 1 cut(s) 1239
BstHHI GCGC 2 cut(s) 307, 1238
BstKTI GATC 7 cut(s) 208, 464, 765, 868, 976, 1553, 1669
BstMAI GTCTC 5 cut(s) 43, 166, 1283, 1488, 1790
BstMBI GATC 7 cut(s) 205, 461, 762, 865, 973, 1550, 1666
BstMWI GCNNNNNNNGC 5 cut(s) 41, 176, 311, 534, 620
BstNI CCWGG 3 cut(s) 155, 295, 1131
BstNSI RCATGY 1 cut(s) 1148
BstSCI CCNGG 5 cut(s) 153, 196, 293, 361, 1129
BstSFI CTRYAG 3 cut(s) 182, 300, 1719
BstUI CGCG 1 cut(s) 978
BstV1I GCAGC 4 cut(s) 111, 301, 717, 765
BstV2I GAAGAC 2 cut(s) 551, 953
BstX2I RGATCY 3 cut(s) 762, 865, 1666
BstYI RGATCY 3 cut(s) 762, 865, 1666
BstZ17I GTATAC 1 cut(s) 606
Bsu36I CCTNAGG 2 cut(s) 394, 1530
BsuI GTATCC 1 cut(s) 913
BsuRI GGCC 1 cut(s) 1528
BtrI CACGTC 3 cut(s) 160, 643, 1800
BtsCI GGATG 3 cut(s) 307, 687, 703
BtsI GCAGTG 2 cut(s) 51, 1784
BtsIMutI CAGTG 3 cut(s) 51, 1568, 1784
BtuMI TCGCGA 1 cut(s) 978
BveI ACCTGC 1 cut(s) 430
Cac8I GCNNGC 5 cut(s) 212, 388, 735, 1190, 1194
CaiI CAGNNNCTG 2 cut(s) 121, 1508
CciI TCATGA 1 cut(s) 1848
CfoI GCGC 2 cut(s) 307, 1238
Cfr13I GGNCC 1 cut(s) 713
CseI GACGC 1 cut(s) 1778
Csp6I GTAC 2 cut(s) 23, 1704
CviAII CATG 9 cut(s) 377, 529, 880, 908, 930, 1145, 1203, 1403, 1849
CviQI GTAC 2 cut(s) 23, 1704
DpnI GATC 7 cut(s) 207, 463, 764, 867, 975, 1552, 1668
DpnII GATC 7 cut(s) 205, 461, 762, 865, 973, 1550, 1666
DraI TTTAAA 1 cut(s) 1291
Eam1104I CTCTTC 2 cut(s) 1224, 1437
EarI CTCTTC 2 cut(s) 1224, 1437
Ecl136II GAGCTC 1 cut(s) 179
Eco130I CCWWGG 1 cut(s) 748
Eco24I GRGCYC 2 cut(s) 181, 1275
Eco31I GGTCTC 2 cut(s) 43, 1283
Eco47I GGWCC 1 cut(s) 713
Eco47III AGCGCT 1 cut(s) 1237
Eco53kI GAGCTC 1 cut(s) 179
Eco57I CTGAAG 3 cut(s) 450, 1124, 1461
Eco81I CCTNAGG 2 cut(s) 394, 1530
EcoICRI GAGCTC 1 cut(s) 179
EcoRI GAATTC 1 cut(s) 332
EcoRII CCWGG 3 cut(s) 153, 293, 1129
EcoT14I CCWWGG 1 cut(s) 748
EcoT22I ATGCAT 3 cut(s) 931, 1404, 1737
EcoT38I GRGCYC 2 cut(s) 181, 1275
ErhI CCWWGG 1 cut(s) 748
Esp3I CGTCTC 2 cut(s) 166, 1790
FaeI CATG 9 cut(s) 380, 532, 883, 911, 933, 1148, 1206, 1406, 1852
FalI AAGNNNNNCTT 4 cut(s) 602, 634, 648, 680
FaqI GGGAC 1 cut(s) 180
FatI CATG 9 cut(s) 376, 528, 879, 907, 929, 1144, 1202, 1402, 1848
FauNDI CATATG 1 cut(s) 521
FblI GTMKAC 2 cut(s) 605, 1718
Fnu4HI GCNGC 5 cut(s) 125, 315, 526, 731, 754
FokI GGATG 3 cut(s) 294, 674, 710
FriOI GRGCYC 2 cut(s) 181, 1275
Fsp4HI GCNGC 5 cut(s) 125, 315, 526, 731, 754
FspBI CTAG 5 cut(s) 677, 831, 1679, 1748, 1793
GlaI GCGC 2 cut(s) 306, 1237
GluI GCNGC 5 cut(s) 125, 315, 526, 731, 754
GsaI CCCAGC 3 cut(s) 131, 218, 1023
GsuI CTGGAG 1 cut(s) 1829
HaeII RGCGCY 1 cut(s) 1239
HaeIII GGCC 1 cut(s) 1528
HapII CCGG 3 cut(s) 198, 363, 917
HgaI GACGC 1 cut(s) 1778
HhaI GCGC 2 cut(s) 307, 1238
Hin1II CATG 9 cut(s) 380, 532, 883, 911, 933, 1148, 1206, 1406, 1852
Hin6I GCGC 2 cut(s) 305, 1236
HinP1I GCGC 2 cut(s) 305, 1236
HincII GTYRAC 1 cut(s) 1592
HindII GTYRAC 1 cut(s) 1592
HindIII AAGCTT 1 cut(s) 839
HpaII CCGG 3 cut(s) 198, 363, 917
HphI GGTGA 5 cut(s) 143, 230, 859, 1076, 1501
Hpy166II GTNNAC 6 cut(s) 151, 606, 1181, 1568, 1592, 1719
Hpy188I TCNGA 8 cut(s) 430, 651, 973, 1344, 1441, 1546, 1873, 1902
Hpy8I GTNNAC 6 cut(s) 151, 606, 1181, 1568, 1592, 1719
HpyAV CCTTC 9 cut(s) 234, 259, 374, 425, 581, 1003, 1102, 1307, 1687
HpyCH4III ACNGT 5 cut(s) 66, 1045, 1325, 1510, 1602
HpyCH4IV ACGT 4 cut(s) 159, 642, 1125, 1799
HpyF10VI GCNNNNNNNGC 5 cut(s) 41, 176, 311, 534, 620
HpySE526I ACGT 4 cut(s) 159, 642, 1125, 1799
Hsp92II CATG 9 cut(s) 380, 532, 883, 911, 933, 1148, 1206, 1406, 1852
HspAI GCGC 2 cut(s) 305, 1236
Kzo9I GATC 7 cut(s) 205, 461, 762, 865, 973, 1550, 1666
LguI GCTCTTC 1 cut(s) 1437
LmnI GCTCC 5 cut(s) 322, 395, 640, 1633, 1834
Lsp1109I GCAGC 4 cut(s) 111, 301, 717, 765
LweI GCATC 7 cut(s) 112, 157, 316, 434, 546, 916, 1744
MaeI CTAG 5 cut(s) 677, 831, 1679, 1748, 1793
MaeII ACGT 4 cut(s) 159, 642, 1125, 1799
MaeIII GTNAC 4 cut(s) 131, 160, 847, 1743
MalI GATC 7 cut(s) 207, 463, 764, 867, 975, 1552, 1668
MboI GATC 7 cut(s) 205, 461, 762, 865, 973, 1550, 1666
MfeI CAATTG 1 cut(s) 1883
MflI RGATCY 3 cut(s) 762, 865, 1666
MhlI GDGCHC 3 cut(s) 181, 351, 1275
MlyI GAGTC 1 cut(s) 943
MmeI TCCRAC 3 cut(s) 309, 1027, 1896
MnlI CCTC 7 cut(s) 134, 137, 403, 688, 704, 837, 1647
Mph1103I ATGCAT 3 cut(s) 931, 1404, 1737
MroXI GAANNNNTTC 3 cut(s) 117, 503, 1125
MseI TTAA 3 cut(s) 444, 942, 1290
MslI CAYNNNNRTG 2 cut(s) 381, 1149
MspI CCGG 3 cut(s) 198, 363, 917
MspR9I CCNGG 5 cut(s) 155, 198, 295, 363, 1131
MunI CAATTG 1 cut(s) 1883
Mva1269I GAATGC 3 cut(s) 1093, 1404, 1737
MvaI CCWGG 3 cut(s) 155, 295, 1131
MvnI CGCG 1 cut(s) 978
MwoI GCNNNNNNNGC 5 cut(s) 41, 176, 311, 534, 620
NciI CCSGG 2 cut(s) 198, 363
NdeI CATATG 1 cut(s) 521
NdeII GATC 7 cut(s) 205, 461, 762, 865, 973, 1550, 1666
NlaIII CATG 9 cut(s) 380, 532, 883, 911, 933, 1148, 1206, 1406, 1852
NlaIV GGNNCC 3 cut(s) 367, 385, 1635
NmuCI GTSAC 4 cut(s) 131, 160, 847, 1743
NruI TCGCGA 1 cut(s) 978
NsiI ATGCAT 3 cut(s) 931, 1404, 1737
NspI RCATGY 1 cut(s) 1148
PagI TCATGA 1 cut(s) 1848
PaqCI CACCTGC 1 cut(s) 430
PasI CCCWGGG 1 cut(s) 294
PciI ACATGT 1 cut(s) 1144
PciSI GCTCTTC 1 cut(s) 1437
PctI GAATGC 3 cut(s) 1093, 1404, 1737
PdmI GAANNNNTTC 3 cut(s) 117, 503, 1125
PfeI GAWTC 9 cut(s) 452, 499, 646, 652, 823, 968, 1301, 1541, 1868
PflFI GACNNNGTC 1 cut(s) 1587
PfoI TCCNGGA 2 cut(s) 196, 1129
PkrI GCNGC 5 cut(s) 126, 316, 527, 732, 755
PleI GAGTC 1 cut(s) 942
PpsI GAGTC 1 cut(s) 942
PscI ACATGT 1 cut(s) 1144
PshBI ATTAAT 1 cut(s) 444
Psp124BI GAGCTC 1 cut(s) 181
Psp1406I AACGTT 1 cut(s) 1125
Psp6I CCWGG 3 cut(s) 153, 293, 1129
PspFI CCCAGC 3 cut(s) 127, 214, 1019
PspGI CCWGG 3 cut(s) 153, 293, 1129
PspN4I GGNNCC 3 cut(s) 367, 385, 1635
PspPI GGNCC 1 cut(s) 713
PstNI CAGNNNCTG 2 cut(s) 121, 1508
PsuI RGATCY 3 cut(s) 762, 865, 1666
PsyI GACNNNGTC 1 cut(s) 1587
RruI TCGCGA 1 cut(s) 978
RsaI GTAC 2 cut(s) 24, 1705
RsaNI GTAC 2 cut(s) 23, 1704
RseI CAYNNNNRTG 2 cut(s) 381, 1149
SacI GAGCTC 1 cut(s) 181
SapI GCTCTTC 1 cut(s) 1437
SaqAI TTAA 3 cut(s) 444, 942, 1290
SatI GCNGC 5 cut(s) 125, 315, 526, 731, 754
Sau3AI GATC 7 cut(s) 205, 461, 762, 865, 973, 1550, 1666
Sau96I GGNCC 1 cut(s) 713
ScaI AGTACT 1 cut(s) 1705
SchI GAGTC 1 cut(s) 943
ScrFI CCNGG 5 cut(s) 155, 198, 295, 363, 1131
SduI GDGCHC 3 cut(s) 181, 351, 1275
SfaNI GCATC 7 cut(s) 112, 157, 316, 434, 546, 916, 1744
SfcI CTRYAG 3 cut(s) 182, 300, 1719
SinI GGWCC 1 cut(s) 713
SmiMI CAYNNNNRTG 2 cut(s) 381, 1149
SmlI CTYRAG 4 cut(s) 491, 692, 1280, 1670
SmoI CTYRAG 4 cut(s) 491, 692, 1280, 1670
SpeI ACTAGT 1 cut(s) 1747
SsiI CCGC 1 cut(s) 525
SspI AATATT 2 cut(s) 442, 1629
SspMI CTAG 5 cut(s) 677, 831, 1679, 1748, 1793
SstI GAGCTC 1 cut(s) 181
StyD4I CCNGG 5 cut(s) 153, 196, 293, 361, 1129
StyI CCWWGG 1 cut(s) 748
TaaI ACNGT 5 cut(s) 66, 1045, 1325, 1510, 1602
TaiI ACGT 4 cut(s) 162, 645, 1128, 1802
TaqI TCGA 3 cut(s) 597, 966, 1245
TaqII GACCGA 1 cut(s) 1265
TatI WGTACW 1 cut(s) 1703
TauI GCSGC 1 cut(s) 528
TfiI GAWTC 9 cut(s) 452, 499, 646, 652, 823, 968, 1301, 1541, 1868
Tru1I TTAA 3 cut(s) 444, 942, 1290
Tru9I TTAA 3 cut(s) 444, 942, 1290
TscAI CASTG 3 cut(s) 51, 1575, 1791
TseFI GTSAC 4 cut(s) 131, 160, 847, 1743
TseI GCWGC 4 cut(s) 124, 314, 730, 753
Tsp45I GTSAC 4 cut(s) 131, 160, 847, 1743
TspDTI ATGAA 4 cut(s) 303, 393, 714, 896
TspRI CASTG 3 cut(s) 51, 1575, 1791
Tth111I GACNNNGTC 1 cut(s) 1587
VpaK11BI GGWCC 1 cut(s) 713
VspI ATTAAT 1 cut(s) 444
XapI RAATTY 3 cut(s) 332, 895, 957
XbaI TCTAGA 1 cut(s) 1792
XceI RCATGY 1 cut(s) 1148
XcmI CCANNNNNNNNNTGG 2 cut(s) 36, 807
XmiI GTMKAC 2 cut(s) 605, 1718
XmnI GAANNNNTTC 3 cut(s) 117, 503, 1125
XspI CTAG 5 cut(s) 677, 831, 1679, 1748, 1793
ZrmI AGTACT 1 cut(s) 1705
Zsp2I ATGCAT 3 cut(s) 931, 1404, 1737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.