Rh5CG441000

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000203
Physical Location & Seq
Reverse (-)
61250154 .. 61255873
5720 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG441000.1

Sequence Viewer

Length: 1815 bp
ATGCATGATGTGGTGCGTGATGTTGCCGTACATATAGCCTCTGAAGAGTTTGTAGAAAAGAAAAAAGATGCGGTTGAAAAAAGAATTGTGGTGAGAGATAAAGCAGAAACTGTGAAGTTGATTGATTGGCCTAAGAATGTTGAGGAACCTACTTATTGCAGTTCACTGAGTATAAGTGGGCTTTGTCAGCTTTTACTGTTGAGACATGAAAGTACAAGAGAATGCAAACCGCCACCCACAATTTTCAATAAAATGGAAGATCTCAAGGTTCTAGTATTTATGGGGATGTTGCCTCCATTCTCACTACAACCATCACTTGCAGTTTTGAAAGACCTTCAAACACTGCGTCTAGAGAGTCACAATCTGCCGGGTGATGTATCTGTCATTAGGGAGCTAAGGAAACTTATGATACTCAGTTTGCGTGAAACCAACATCAAGCAATTGCCTGATACATTTAAGAATTTGTCTAATCTAAGATTGCTTGATTTGTTCAGATGTAAGGAGCTTGAAATAATCTCACCAGGGGTCATATCAAGTTTATGCCTACTTGAAGAGTTGTACATGTGGTCTAGCTTCGAGGATTGGGTGGTTGAGAAACTAGCCTCAACTGAAACAGCTAATTGGATCTCTCAATTGGAGGCTCAGGATAGGGCTGCATCCAAAGAAGTAGAACATTGGGAAATGACAATGGACACATGGAAGAGATTCAACAAATTGGCGGTTGAGCAACCAGCAAACTTAGGAAAACAATTTAGAGAAGAGGTTCAAGGTCTCCTTAGAGCAAACGATGAGCAAACAAGGTGGGCCAACTCCATGGACTGGAAAACTGGTATACTTGCGGAGCTACTTTCCTTGTCCCATTTGTCTACTTTAGAAGTTTTTCTACCACCGGTTAATGAAATAGTAACCAGCAATTTGTTTAACAAGCTGGAAAGATTTAAGATCTCTATAGGATGGAAGCACCCTATGTATGATTGGGAATTAAAGCATGCTGACAACTACTTGGGAGTTCACGATCTTGATGCAAGCGCTGCTGTGGGTAGTGGAATCACTTTGTTGCTAAAGAAAACCAGCATTCTTGAGTTTAGAATGAAGAATTTGACCAAACCTCAAGCTCTGAATGTCTTAGATACAGATCAGTACCATTTCGCAAAGACGAAGTCTCTTACACTCAAGGAGTGTGATGCTGTGGAGTATCTGATTGACAGGACACTTTCGAAACATAATACTCCACATAGCAGCAACGGCCTCTTTCCAGTGTTGAATTCACTGGTGATCAGTGGTGCAAGTAGGCTGAAAATGATTTTTAATGGTGAGCTGCCGACGGGGTCTCTCAAGGAACTAAAACATTTGGAATTAAATTGTCTACCTGCATTGACATATATTTGGAAGACCAAGAGTCAATCTGAATTGGGTCTCTGGAGAAACATTCTAGGACCTGTTCAAGTGCTGAGAATACAGTATTGCTCCTCCTTGGAAAAGATTTTTGCCTATGAAGATGATGAGGAAGTGCTCAACTTCCAAAGTCTGACAGAGTTGACTCTGTCACATCTACCAAGCTTCACTGGGATAAGCAAAAATATCTCCAAGGGGTCGAAAAGGCTACCAGAAGACATCAGCCCGAAACTATCTGACGTCATCATACAACCTCTGTTCGACACCAAGACCGACTCGGCGACTGACGACCTGTCTCTTAGACCGACTAACACCCATCGTTCTCCTCCACAGCAGCAAGCGAGCAAGCCACCTCAGGTCCTCCACCTCCGGTCCCCTCATCCGATTCTTTACGCCGGTAAGATTCTTGCTACGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

604

Amino Acids

68.73

Weight (kDa)

6.41

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 109 - 200 2.1e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1638
Acc36I ACCTGC 1 cut(s) 1378
AccB7I CCANNNNNTGG 1 cut(s) 819
AccI GTMKAC 3 cut(s) 832, 866, 1366
AciI CCGC 4 cut(s) 71, 230, 719, 839
AclWI GGATC 1 cut(s) 632
AcsI RAATTY 3 cut(s) 460, 1096, 1264
AcuI CTGAAG 1 cut(s) 63
AcyI GRCGYC 1 cut(s) 1635
AfaI GTAC 4 cut(s) 30, 214, 560, 1142
AfeI AGCGCT 1 cut(s) 1030
AfiI CCNNNNNNNGG 1 cut(s) 819
AflIII ACRYGT 1 cut(s) 561
AgeI ACCGGT 1 cut(s) 889
AhdI GACNNNNNGTC 2 cut(s) 1398, 1687
AjnI CCWGG 1 cut(s) 520
Alw21I GWGCWC 1 cut(s) 1515
Alw26I GTCTC 6 cut(s) 196, 776, 1167, 1335, 1421, 1695
AlwI GGATC 1 cut(s) 632
AlwNI CAGNNNCTG 1 cut(s) 110
Aor51HI AGCGCT 1 cut(s) 1030
AoxI GGCC 3 cut(s) 128, 804, 1246
ApeKI GCWGC 5 cut(s) 653, 1031, 1239, 1318, 1729
ApoI RAATTY 3 cut(s) 460, 1096, 1264
ArsI GACNNNNNNTTYG 4 cut(s) 331, 363, 1145, 1177
AsiGI ACCGGT 1 cut(s) 889
Asp700I GAANNNNTTC 3 cut(s) 704, 762, 879
AspLEI GCGC 1 cut(s) 1031
AspS9I GGNCC 4 cut(s) 804, 1436, 1753, 1767
AsuC2I CCSGG 1 cut(s) 369
AsuHPI GGTGA 5 cut(s) 103, 383, 510, 1285, 1325
AsuII TTCGAA 1 cut(s) 1217
AvaII GGWCC 3 cut(s) 1436, 1753, 1767
AxyI CCTNAGG 1 cut(s) 1749
BarI GAAGNNNNNNTAC 2 cut(s) 867, 899
BbsI GAAGAC 2 cut(s) 1397, 1617
Bbv12I GWGCWC 1 cut(s) 1515
BbvI GCAGC 5 cut(s) 640, 1018, 1251, 1305, 1741
BccI CCATC 3 cut(s) 319, 948, 1719
BceAI ACGGC 2 cut(s) 11, 1261
BcgI CGANNNNNNTGC 2 cut(s) 1004, 1038
BciT130I CCWGG 1 cut(s) 522
BclI TGATCA 1 cut(s) 1275
BcnI CCSGG 1 cut(s) 369
BcoDI GTCTC 6 cut(s) 196, 776, 1167, 1335, 1421, 1695
BfaI CTAG 5 cut(s) 272, 350, 570, 599, 1433
BfmI CTRYAG 2 cut(s) 948, 1811
BfoI RGCGCY 1 cut(s) 1032
BfuAI ACCTGC 1 cut(s) 1378
BglII AGATCT 2 cut(s) 259, 942
BisI GCNGC 5 cut(s) 654, 1032, 1240, 1319, 1730
BlsI GCNGC 5 cut(s) 655, 1033, 1241, 1320, 1731
Bme1390I CCNGG 2 cut(s) 369, 522
Bme18I GGWCC 3 cut(s) 1436, 1753, 1767
BmeRI GACNNNNNGTC 2 cut(s) 1398, 1687
BmgT120I GGNCC 4 cut(s) 804, 1436, 1753, 1767
BmiI GGNNCC 2 cut(s) 147, 1769
BmrFI CCNGG 2 cut(s) 369, 522
BmrI ACTGGG 1 cut(s) 1575
BmsI GCATC 4 cut(s) 58, 665, 1012, 1174
BmuI ACTGGG 1 cut(s) 1575
BpiI GAAGAC 2 cut(s) 1397, 1617
BpmI CTGGAG 1 cut(s) 1441
Bpu10I CCTNAGC 2 cut(s) 395, 642
Bpu14I TTCGAA 1 cut(s) 1217
BpuEI CTTGAG 5 cut(s) 248, 1095, 1100, 1157, 1319
BpuMI CCSGG 1 cut(s) 369
BsaBI GATNNNNATC 1 cut(s) 1134
BsaHI GRCGYC 1 cut(s) 1635
BsaI GGTCTC 3 cut(s) 776, 1335, 1421
BsaJI CCNNGG 4 cut(s) 521, 813, 1473, 1587
BsaWI WCCGGW 2 cut(s) 889, 1764
Bsc4I CCNNNNNNNGG 1 cut(s) 819
Bse118I RCCGGY 2 cut(s) 889, 1790
Bse1I ACTGG 5 cut(s) 824, 832, 1256, 1275, 1570
Bse21I CCTNAGG 1 cut(s) 1749
Bse8I GATNNNNATC 1 cut(s) 1134
BseBI CCWGG 1 cut(s) 522
BseDI CCNNGG 4 cut(s) 521, 813, 1473, 1587
BseGI GGATG 4 cut(s) 291, 656, 959, 1774
BseJI GATNNNNATC 1 cut(s) 1134
BseLI CCNNNNNNNGG 1 cut(s) 819
BseMII CTCAG 5 cut(s) 158, 427, 656, 1442, 1763
BseNI ACTGG 5 cut(s) 824, 832, 1256, 1275, 1570
BseRI GAGGAG 2 cut(s) 1459, 1710
BseXI GCAGC 5 cut(s) 640, 1018, 1251, 1305, 1741
BshFI GGCC 3 cut(s) 130, 806, 1248
BshTI ACCGGT 1 cut(s) 889
BsiHKAI GWGCWC 1 cut(s) 1515
BsiSI CCGG 4 cut(s) 368, 890, 1765, 1791
BslFI GGGAC 2 cut(s) 841, 1753
BslI CCNNNNNNNGG 1 cut(s) 819
BsmAI GTCTC 6 cut(s) 196, 776, 1167, 1335, 1421, 1695
BsmFI GGGAC 2 cut(s) 841, 1753
BsmI GAATGC 2 cut(s) 227, 1074
BsnI GGCC 3 cut(s) 130, 806, 1248
Bso31I GGTCTC 3 cut(s) 776, 1335, 1421
Bsp119I TTCGAA 1 cut(s) 1217
Bsp1286I GDGCHC 1 cut(s) 1515
Bsp1407I TGTACA 1 cut(s) 558
Bsp143I GATC 6 cut(s) 259, 624, 942, 1015, 1135, 1275
Bsp19I CCATGG 1 cut(s) 813
BspACI CCGC 4 cut(s) 71, 230, 719, 839
BspANI GGCC 3 cut(s) 130, 806, 1248
BspCNI CTCAG 5 cut(s) 159, 426, 655, 1443, 1762
BspLI GGNNCC 2 cut(s) 147, 1769
BspMI ACCTGC 1 cut(s) 1378
BspPI GGATC 1 cut(s) 632
BspT104I TTCGAA 1 cut(s) 1217
BspTNI GGTCTC 3 cut(s) 776, 1335, 1421
BsrFI RCCGGY 2 cut(s) 889, 1790
BsrGI TGTACA 1 cut(s) 558
BsrI ACTGG 5 cut(s) 824, 832, 1256, 1275, 1570
BssAI RCCGGY 2 cut(s) 889, 1790
BssECI CCNNGG 4 cut(s) 521, 813, 1473, 1587
BssMI GATC 6 cut(s) 259, 624, 942, 1015, 1135, 1275
BssNAI GTATAC 1 cut(s) 833
BssNI GRCGYC 1 cut(s) 1635
BssT1I CCWWGG 3 cut(s) 813, 1473, 1587
Bst1107I GTATAC 1 cut(s) 833
Bst2UI CCWGG 1 cut(s) 522
Bst4CI ACNGT 3 cut(s) 112, 198, 1461
Bst6I CTCTTC 4 cut(s) 39, 546, 695, 753
BstACI GRCGYC 1 cut(s) 1635
BstAPI GCANNNNNTGC 1 cut(s) 1031
BstAUI TGTACA 1 cut(s) 558
BstBI TTCGAA 1 cut(s) 1217
BstC8I GCNNGC 5 cut(s) 990, 1027, 1734, 1738, 1742
BstDSI CCRYGG 1 cut(s) 813
BstF5I GGATG 4 cut(s) 291, 656, 959, 1774
BstH2I RGCGCY 1 cut(s) 1032
BstHHI GCGC 1 cut(s) 1031
BstKTI GATC 6 cut(s) 262, 627, 945, 1018, 1138, 1278
BstMAI GTCTC 6 cut(s) 196, 776, 1167, 1335, 1421, 1695
BstMBI GATC 6 cut(s) 259, 624, 942, 1015, 1135, 1275
BstMWI GCNNNNNNNGC 3 cut(s) 187, 1031, 1245
BstNI CCWGG 1 cut(s) 522
BstNSI RCATGY 2 cut(s) 565, 992
BstSCI CCNGG 2 cut(s) 367, 520
BstSFI CTRYAG 2 cut(s) 948, 1811
BstV1I GCAGC 5 cut(s) 640, 1018, 1251, 1305, 1741
BstV2I GAAGAC 2 cut(s) 1397, 1617
BstX2I RGATCY 3 cut(s) 259, 624, 942
BstXI CCANNNNNNTGG 1 cut(s) 814
BstYI RGATCY 3 cut(s) 259, 624, 942
BstZ17I GTATAC 1 cut(s) 833
Bsu36I CCTNAGG 1 cut(s) 1749
BsuRI GGCC 3 cut(s) 130, 806, 1248
BtgI CCRYGG 1 cut(s) 813
BtsCI GGATG 4 cut(s) 291, 656, 959, 1774
BtsI GCAGTG 1 cut(s) 341
BtsIMutI CAGTG 6 cut(s) 164, 341, 1263, 1268, 1285, 1563
BveI ACCTGC 1 cut(s) 1378
Cac8I GCNNGC 5 cut(s) 990, 1027, 1734, 1738, 1742
CaiI CAGNNNCTG 1 cut(s) 110
CfoI GCGC 1 cut(s) 1031
Cfr10I RCCGGY 2 cut(s) 889, 1790
Cfr13I GGNCC 4 cut(s) 804, 1436, 1753, 1767
CseI GACGC 1 cut(s) 335
Csp6I GTAC 4 cut(s) 29, 213, 559, 1141
CspAI ACCGGT 1 cut(s) 889
CspCI CAANNNNNGTGG 2 cut(s) 782, 817
CviAII CATG 6 cut(s) 5, 206, 562, 696, 814, 989
CviQI GTAC 4 cut(s) 29, 213, 559, 1141
DpnI GATC 6 cut(s) 261, 626, 944, 1017, 1137, 1277
DpnII GATC 6 cut(s) 259, 624, 942, 1015, 1135, 1275
DriI GACNNNNNGTC 2 cut(s) 1398, 1687
Eam1104I CTCTTC 4 cut(s) 39, 546, 695, 753
Eam1105I GACNNNNNGTC 2 cut(s) 1398, 1687
EarI CTCTTC 4 cut(s) 39, 546, 695, 753
Eco130I CCWWGG 3 cut(s) 813, 1473, 1587
Eco31I GGTCTC 3 cut(s) 776, 1335, 1421
Eco47I GGWCC 3 cut(s) 1436, 1753, 1767
Eco47III AGCGCT 1 cut(s) 1030
Eco57I CTGAAG 1 cut(s) 63
Eco81I CCTNAGG 1 cut(s) 1749
EcoO109I RGGNCCY 2 cut(s) 1436, 1753
EcoRI GAATTC 1 cut(s) 1264
EcoRII CCWGG 1 cut(s) 520
EcoT14I CCWWGG 3 cut(s) 813, 1473, 1587
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 3 cut(s) 813, 1473, 1587
FaeI CATG 6 cut(s) 8, 209, 565, 699, 817, 992
FalI AAGNNNNNCTT 2 cut(s) 759, 791
FaqI GGGAC 2 cut(s) 841, 1753
FatI CATG 6 cut(s) 4, 205, 561, 695, 813, 988
FbaI TGATCA 1 cut(s) 1275
FblI GTMKAC 3 cut(s) 832, 866, 1366
Fnu4HI GCNGC 5 cut(s) 654, 1032, 1240, 1319, 1730
FokI GGATG 4 cut(s) 298, 643, 966, 1761
Fsp4HI GCNGC 5 cut(s) 654, 1032, 1240, 1319, 1730
FspBI CTAG 5 cut(s) 272, 350, 570, 599, 1433
GlaI GCGC 1 cut(s) 1030
GluI GCNGC 5 cut(s) 654, 1032, 1240, 1319, 1730
GsuI CTGGAG 1 cut(s) 1441
HaeII RGCGCY 1 cut(s) 1032
HaeIII GGCC 3 cut(s) 130, 806, 1248
HapII CCGG 4 cut(s) 368, 890, 1765, 1791
HgaI GACGC 1 cut(s) 335
HhaI GCGC 1 cut(s) 1031
Hin1I GRCGYC 1 cut(s) 1635
Hin1II CATG 6 cut(s) 8, 209, 565, 699, 817, 992
Hin6I GCGC 1 cut(s) 1029
HinP1I GCGC 1 cut(s) 1029
HincII GTYRAC 1 cut(s) 1539
HindII GTYRAC 1 cut(s) 1539
HindIII AAGCTT 1 cut(s) 1558
HinfI GANTC 8 cut(s) 355, 705, 1047, 1399, 1540, 1670, 1780, 1798
HpaII CCGG 4 cut(s) 368, 890, 1765, 1791
HphI GGTGA 5 cut(s) 103, 383, 510, 1285, 1325
Hpy166II GTNNAC 6 cut(s) 164, 833, 867, 1012, 1367, 1539
Hpy188I TCNGA 8 cut(s) 43, 494, 1119, 1200, 1408, 1530, 1633, 1779
Hpy188III TCNNGA 6 cut(s) 350, 644, 1013, 1019, 1079, 1420
Hpy8I GTNNAC 6 cut(s) 164, 833, 867, 1012, 1367, 1539
Hpy99I CGWCG 1 cut(s) 1327
HpyAV CCTTC 1 cut(s) 344
HpyCH4III ACNGT 3 cut(s) 112, 198, 1461
HpyCH4IV ACGT 1 cut(s) 1635
HpyCH4V TGCA 8 cut(s) 4, 159, 225, 320, 656, 1025, 1286, 1373
HpyF10VI GCNNNNNNNGC 3 cut(s) 187, 1031, 1245
HpySE526I ACGT 1 cut(s) 1635
Hsp92I GRCGYC 1 cut(s) 1635
Hsp92II CATG 6 cut(s) 8, 209, 565, 699, 817, 992
HspAI GCGC 1 cut(s) 1029
Ksp22I TGATCA 1 cut(s) 1275
Kzo9I GATC 6 cut(s) 259, 624, 942, 1015, 1135, 1275
LmnI GCTCC 4 cut(s) 391, 502, 841, 1472
Lsp1109I GCAGC 5 cut(s) 640, 1018, 1251, 1305, 1741
LweI GCATC 4 cut(s) 58, 665, 1012, 1174
MaeI CTAG 5 cut(s) 272, 350, 570, 599, 1433
MaeII ACGT 1 cut(s) 1635
MaeIII GTNAC 3 cut(s) 356, 904, 1545
MalI GATC 6 cut(s) 261, 626, 944, 1017, 1137, 1277
MboI GATC 6 cut(s) 259, 624, 942, 1015, 1135, 1275
MboII GAAGA 9 cut(s) 56, 269, 563, 712, 770, 1105, 1402, 1508, 1622
MfeI CAATTG 2 cut(s) 440, 632
MflI RGATCY 3 cut(s) 259, 624, 942
MhlI GDGCHC 1 cut(s) 1515
MlyI GAGTC 4 cut(s) 364, 1408, 1534, 1664
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 3 cut(s) 704, 762, 879
MseI TTAA 7 cut(s) 456, 894, 921, 939, 983, 1308, 1358
MspI CCGG 4 cut(s) 368, 890, 1765, 1791
MspR9I CCNGG 2 cut(s) 369, 522
MunI CAATTG 2 cut(s) 440, 632
Mva1269I GAATGC 2 cut(s) 227, 1074
MvaI CCWGG 1 cut(s) 522
MwoI GCNNNNNNNGC 3 cut(s) 187, 1031, 1245
NciI CCSGG 1 cut(s) 369
NcoI CCATGG 1 cut(s) 813
NdeII GATC 6 cut(s) 259, 624, 942, 1015, 1135, 1275
NlaIII CATG 6 cut(s) 8, 209, 565, 699, 817, 992
NlaIV GGNNCC 2 cut(s) 147, 1769
NmeAIII GCCGAG 1 cut(s) 1652
NmuCI GTSAC 2 cut(s) 356, 1545
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 565, 992
NspV TTCGAA 1 cut(s) 1217
PaeI GCATGC 1 cut(s) 992
PciI ACATGT 1 cut(s) 561
PctI GAATGC 2 cut(s) 227, 1074
PdmI GAANNNNTTC 3 cut(s) 704, 762, 879
PfeI GAWTC 4 cut(s) 705, 1047, 1780, 1798
PflFI GACNNNGTC 3 cut(s) 1159, 1327, 1543
PflMI CCANNNNNTGG 1 cut(s) 819
PinAI ACCGGT 1 cut(s) 889
PkrI GCNGC 5 cut(s) 655, 1033, 1241, 1320, 1731
PleI GAGTC 4 cut(s) 363, 1407, 1534, 1664
PpsI GAGTC 4 cut(s) 363, 1407, 1534, 1664
PpuMI RGGWCCY 2 cut(s) 1436, 1753
PscI ACATGT 1 cut(s) 561
Psp5II RGGWCCY 2 cut(s) 1436, 1753
Psp6I CCWGG 1 cut(s) 520
PspGI CCWGG 1 cut(s) 520
PspN4I GGNNCC 2 cut(s) 147, 1769
PspPI GGNCC 4 cut(s) 804, 1436, 1753, 1767
PspPPI RGGWCCY 2 cut(s) 1436, 1753
PstNI CAGNNNCTG 1 cut(s) 110
PsuI RGATCY 3 cut(s) 259, 624, 942
PsyI GACNNNGTC 3 cut(s) 1159, 1327, 1543
RsaI GTAC 4 cut(s) 30, 214, 560, 1142
RsaNI GTAC 4 cut(s) 29, 213, 559, 1141
SaqAI TTAA 7 cut(s) 456, 894, 921, 939, 983, 1308, 1358
SatI GCNGC 5 cut(s) 654, 1032, 1240, 1319, 1730
Sau3AI GATC 6 cut(s) 259, 624, 942, 1015, 1135, 1275
Sau96I GGNCC 4 cut(s) 804, 1436, 1753, 1767
SchI GAGTC 4 cut(s) 364, 1408, 1534, 1664
ScrFI CCNGG 2 cut(s) 369, 522
SduI GDGCHC 1 cut(s) 1515
SfaNI GCATC 4 cut(s) 58, 665, 1012, 1174
SfcI CTRYAG 2 cut(s) 948, 1811
SfuI TTCGAA 1 cut(s) 1217
SinI GGWCC 3 cut(s) 1436, 1753, 1767
SmlI CTYRAG 5 cut(s) 263, 1079, 1110, 1172, 1334
SmoI CTYRAG 5 cut(s) 263, 1079, 1110, 1172, 1334
SphI GCATGC 1 cut(s) 992
SsiI CCGC 4 cut(s) 71, 230, 719, 839
SspMI CTAG 5 cut(s) 272, 350, 570, 599, 1433
StyD4I CCNGG 2 cut(s) 367, 520
StyI CCWWGG 3 cut(s) 813, 1473, 1587
TaaI ACNGT 3 cut(s) 112, 198, 1461
TaiI ACGT 1 cut(s) 1638
TaqI TCGA 4 cut(s) 576, 1217, 1595, 1656
TaqII GACCGA 2 cut(s) 1682, 1714
TatI WGTACW 2 cut(s) 212, 558
TfiI GAWTC 4 cut(s) 705, 1047, 1780, 1798
Tru1I TTAA 7 cut(s) 456, 894, 921, 939, 983, 1308, 1358
Tru9I TTAA 7 cut(s) 456, 894, 921, 939, 983, 1308, 1358
TscAI CASTG 6 cut(s) 171, 348, 1263, 1275, 1285, 1570
TseFI GTSAC 2 cut(s) 356, 1545
TseI GCWGC 5 cut(s) 653, 1031, 1239, 1318, 1729
Tsp45I GTSAC 2 cut(s) 356, 1545
TspDTI ATGAA 4 cut(s) 222, 912, 1106, 1509
TspRI CASTG 6 cut(s) 171, 348, 1263, 1275, 1285, 1570
Tth111I GACNNNGTC 3 cut(s) 1159, 1327, 1543
Van91I CCANNNNNTGG 1 cut(s) 819
VpaK11BI GGWCC 3 cut(s) 1436, 1753, 1767
XapI RAATTY 3 cut(s) 460, 1096, 1264
XbaI TCTAGA 1 cut(s) 349
XceI RCATGY 2 cut(s) 565, 992
XmiI GTMKAC 3 cut(s) 832, 866, 1366
XmnI GAANNNNTTC 3 cut(s) 704, 762, 879
XspI CTAG 5 cut(s) 272, 350, 570, 599, 1433
ZraI GACGTC 1 cut(s) 1636
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.