RLG00000010937

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
5517981 .. 5522107
4127 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010937

Sequence Viewer

Length: 3786 bp
ATGGATATTATTCTAGCATTGGTACAACCATTGGCAGAATGGGCAGTGAGACCAATTCGGCGACAGTTGAGTTATGTGTTTCACTACAAGAGCAACATTGAGCATCTCAACGGACAGGTTGTGCAGCTGCGTGAAAAGAGAGAAGAAGTGGACCTGGCGGTGACAAATGCGAGACGAGCTTTACAGAGAATTGATGGCGGAGTTGGAAGATGGCTGGACGAGGTACACACAGTCTTAGAAGAAAAGGACGAGGAGTCGTGTTTCAGTGAAGAAAATGTAGCGGCAAGGGCAGCGTGCTGTAATGGGTGGCTTCCAAATATCAAGTGTCGTTATTCTTTGGGAAGGAAAGCTAAGAAGATGACTGCGAAGGTGGATAATCTTCTTGCTAATGAACCCAGGGCTATAGCGCATACTGCTGCTCCCCCTTTGGTGGAATTCAAACCCACAGAGCACTCTACACTGCTCGGAACCAACTTCCATGAAGGTGCCAGCTCCTCTGCAGGAACATCAACCCAAGAACAGCCACCTGCATCTGAAGGAAATAATATTAATTTTGATTCAAGAAGAACAACCATTAGAGATGTGACGGAAGCTCTCAAGGGGAATCAATTCAATCCGATTATCATATGCGGCATGGGCGGCATCGGGAAGACGACATTGATGGGGCAAGTCTTTGAGAAAGCAAAGGAAGAAGGTCTGTTCGATGAGTATACAAAGGCAACCCTTAAGGAATCTCTTGACAAAGCTCCTGACGTGATTCAGATTCAAGGCGAACTTGCAGAATATCTAGGCAAGAACATCTTTGAGGATGAAAAAGAGAGAGGTCCAAGAGCAACTAAGCTACGTGCGAGATTATCCCAAGGCAGCAAGAAGATCCTTGTAATGTTAGACAATGTTTCCACAACAACCCCAGACTTTTTGTGGGACATAGGGATTCCCCGTAGTTGTAAACTTCTGGTGACATCAAGACAACAAGATCTATTCAAGGACATGGGCACAAGAAAGAATTTTCCCATTCATGGTTTGCCGGATCCTGATGCCTGGAGTCTGTTTAAGAAGACAGCAGGAAGTTCTATCGAATCTGATCGCGAGTTAGAAGTTGTAGCAAAAGAGGTTTTGAAGGAATGTGCTGGGTTGCCCATTGCAATTTCAACTGTTGGAACGGCACTAGAAAGTGAAGACATTGCTGTTTGGAAGAATGCACTAAGGGAACTAAAGAAGGCTAGTCCAGAAAACGTTCCAGGAGTGATAGAACATGTGTATGGCAAAATCAAGTTCAGCTATGAATGTTTACCAAGCGAGCAAGCCAGATCATGCTTTTTGTTGTGTTGCATATTTGAAGAAAGCGCTTATATAGAGATAGAAGATTTGGTTAGATATGGGCTCGGCCTCAAGCTCTTTAAAGGCATTGATTCAATTGTTGAAGGAAGAAACTGTATAAAAACATTGGTTCAGACACTCAAATATCGCTTTTTATTGTTAGAGAGCGATAAGAAAGAGTGTGTGAGAATGCATGATGTGGTGCGTGATGTTGCCGTGCATATAGCTTCTGAAGAGTTTGTAGAAAAGAAAAATGATGGGGTTGAAAAGAGAATTGTGGTGAGAGATAAAGCAGTAACTTTGAAGTTGATGGATTGGCCTAAGGATAGTGATTCTGAGCGATCTATTTATTGCAGTTCACTGAGTATCAGTGGGCATTGTCAGCTTTTATTGTTGAGAACTCTATCTAGAGTTAAATCTCTATTGGAGCCTCCATCCTCAATTTTCAATAGAATGGAAGATCTCAAGGTTCTAGCAATAATTGAGGAGGACGGGTGGTCTAGTTTTTTTCAAGAAACCAGCAAAATGCCTATGTTGTCACTAGTGTCATCAGTTGCAGTTTTGAACAACCTTCAAACACTGCGTCTACAGACGTGCAATCTGGAGTGTGATGTATCTGTCATTGGGGAGCTAAGGACACTCACGATACTTAGTTTACGTGAATCCGACATCAAGCAATTGCCTGATACATTTAAAAATTTATCTAATCTGAGACTGCTTGATTTGTCCGAATGTACGGAACTTCAAATAATCCCACCAGGTGTGATATCAAGTTTATCCCAACTAGAAGAATTGTACATGTTGGACAGCTTTGACAATTGGGTGGTTGATAAACTAGTCTCAACTGAAACAATCAATTGGATCTCTCAATTGGAGGCTGAAGAAAGAGCTAGATCTGAAGAAGTGAACAAGTGGAAGAGAATCAACACATTGGCGGTTGAACAACCAGCCAACCATGAGGAGATTAATGGGCTTCTTGAAGAATGTGAAGAGAGGAGAAGGTGGGCCAAGTCCATGGACTGGACAAGTGGGATACTTTCAGAACTACTTTCCTTGTCCGGTTTGACTCGTTTAAGTGTTTTTCTACCACCGCTTGATATTCTGCGAACAACCGATGTACTGGGCAAGAAGCTTGAAAGATTTCAGATCTCTTTAGGATGGAATGATGGATCGGAATATGGTGGCCCGCGTTCTGAGAACTACTTGGGAGTTTTTGATCTTGATGCAAGCTCACTCGTGGGTAGTAATATCAGTTGGTTGCTAAACAAAACCTACACTCTTGAGTTAAAACGCATGAAGAATTTGACAGATCCTCTGAATGTCTTCGATTTTGCAAACTTGAAGTCTCTTGAACTCGACGGCTGTGATGCTCTGGAATATCTGATTGACGTGACACGTGTAAACCCTGCTACTCCACGCAGTACCGTCTTTCCCGTCTTGGAGTCACTGATAGTCAGTGGTGCAAGAAGGCTCAAGGAGATTTGTCATGGTGAGCTGCTCCACACCAAGGTTCATTTTCCAGTCTTAAGAAGTCTAGAATTCTTATCAATTAATGATTGTAATAGTTTGAGAACTCTGTTCTCCCCTTCAATCGCCAGAGGTCTTGTGAAGCTCCAAAGACTAGAGATAGAAAACTGCGAGAAGATTGAAGAGATAGTAGCAGCAGCAGCAGAGGGTGATGAAGAAACAGAGGATGACAACATCTTCCCTCAGCTAACAGAGTTGTGGCTTGAAAGTCTACCCAATCTCAGAACTCTGTTCTCCCCTTCAATCGCCAGAGGTCTTGTGAAGCTCCAAACACTAGAGATAGAAAACTGCGAGAAGATTGAAGAGATAGTAGCAGCAGCAGAGGGTGATGAAGAAACAGAGGATGACAACATCTTCCCTCAGCTAACAGTTTTGATTCTTAGAAATCTACCCAATCTCAGAACTCTGCTCTCCCCTTCAATCGCCAGAGGTCTTGTGAAGCTCCAAAGACTAGGAATCATAAACTGCGAGAAGATTGAAGAGATAGTAGCAGCAGCAGCAGAGGGTGATGAAGAAACAGAGGATGACAACATCTTCCCTCAGCTAACAGTTTTGTATCTTACCGATCTACCCAATCTCAGAACTCTGCTCTCCCCTTCAATCGCCAGAGGTCTTGTGAAGCTCCAAACACTACATATCGAAAACTGCGAGAAGATTGAAGAGATAGTAGCAGCAGCAGTGGGTGATGAAGAAACAGAGGATGACAAAATCTTCCCTCAACTAACAGTTTTGTGGCTTTGTAATCTACCCAGTCTCAGAAGCTTTTCGCAAGGCAAATATAATTTCAAATGGCCACTACTGAGAGGTATAAGAATCGAAGGATGCTGCAATATGAAGAAGTTTTGTTTCGGATCCGTCAGCATACCAAGGGAAGTGGAAATGTACGATGTTGATGAGAATGTTTTGCAGAAGCTGAATAACAGTAGAAAAGAAAAATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1262

Amino Acids

142.04

Weight (kDa)

5.08

Isoelectric Point (pI)

55.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 190 - 356 2.9e-18 NB-ARC domain
LRR_14 PF23598 623 - 764 1.8e-08 Leucine-rich repeat region
LRR_8 PF13855 652 - 707 2.9e-07 Leucine rich repeat
LRR_RPS2 PF23247 866 - 987 3.2e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1004 - 1114 9.6e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1064 - 1145 1.2e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1124 - 1229 5.3e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 535
Acc36I ACCTGC 1 cut(s) 535
AccB1I GGYRCC 1 cut(s) 485
AccB7I CCANNNNNTGG 1 cut(s) 2340
AccI GTMKAC 3 cut(s) 710, 1906, 3058
AccII CGCG 2 cut(s) 1089, 2509
AciI CCGC 8 cut(s) 158, 198, 281, 630, 639, 2255, 2411, 2507
AclI AACGTT 1 cut(s) 1236
AclWI GGATC 8 cut(s) 868, 1025, 1038, 2189, 2497, 2624, 3693, 3706
AcoI YGGCCR 1 cut(s) 3638
AcsI RAATTY 5 cut(s) 434, 1006, 2017, 2620, 2858
AcuI CTGAAG 4 cut(s) 555, 1572, 2220, 2238
AcvI CACGTG 1 cut(s) 2717
AdeI CACNNNGTG 1 cut(s) 2081
AfaI GTAC 7 cut(s) 24, 225, 2056, 2117, 2439, 2743, 3731
AfeI AGCGCT 1 cut(s) 1348
AfiI CCNNNNNNNGG 4 cut(s) 430, 1019, 2340, 2827
AflII CTTAAG 2 cut(s) 725, 2845
AflIII ACRYGT 4 cut(s) 1255, 2118, 2714, 2716
AhdI GACNNNNNGTC 2 cut(s) 253, 1816
AhlI ACTAGT 2 cut(s) 1861, 2155
AjiI CACGTC 3 cut(s) 754, 1914, 2710
AjnI CCWGG 5 cut(s) 153, 395, 1040, 1240, 2077
Alw21I GWGCWC 1 cut(s) 453
Alw26I GTCTC 6 cut(s) 43, 166, 2026, 2164, 2670, 3605
AlwI GGATC 8 cut(s) 868, 1025, 1038, 2189, 2497, 2624, 3693, 3706
AlwNI CAGNNNCTG 1 cut(s) 3760
Aor51HI AGCGCT 1 cut(s) 1348
AoxI GGCC 5 cut(s) 1387, 1637, 2325, 2503, 3638
ApoI RAATTY 5 cut(s) 434, 1006, 2017, 2620, 2858
ArsI GACNNNNNNTTYG 4 cut(s) 1888, 1920, 2648, 2680
AseI ATTAAT 3 cut(s) 549, 2286, 2871
Asp700I GAANNNNTTC 5 cut(s) 608, 1236, 2460, 2642, 3610
AspLEI GCGC 2 cut(s) 409, 1349
AspS9I GGNCC 4 cut(s) 151, 824, 2325, 2504
AsuHPI GGTGA 8 cut(s) 172, 970, 1612, 2822, 3008, 3185, 3365, 3542
AvaII GGWCC 2 cut(s) 151, 824
AxyI CCTNAGG 1 cut(s) 1641
BaeGI GKGCMC 1 cut(s) 998
BalI TGGCCA 1 cut(s) 3640
BamHI GGATCC 2 cut(s) 1030, 3698
BanI GGYRCC 1 cut(s) 485
BanII GRGCYC 1 cut(s) 1386
BauI CACGAG 1 cut(s) 2555
BbrPI CACGTG 1 cut(s) 2717
BbsI GAAGAC 4 cut(s) 656, 1064, 1185, 2635
Bbv12I GWGCWC 1 cut(s) 453
BbvCI CCTCAGC 3 cut(s) 3030, 3207, 3387
BccI CCATC 8 cut(s) 188, 204, 655, 1571, 1624, 1762, 2472, 2480
BceAI ACGGC 3 cut(s) 1179, 1520, 2695
BciT130I CCWGG 5 cut(s) 155, 397, 1042, 1242, 2079
BciVI GTATCC 1 cut(s) 2346
BcoDI GTCTC 6 cut(s) 43, 166, 2026, 2164, 2670, 3605
BcuI ACTAGT 2 cut(s) 1861, 2155
BfmI CTRYAG 3 cut(s) 402, 498, 1907
BfoI RGCGCY 1 cut(s) 1350
BfrI CTTAAG 2 cut(s) 725, 2845
BfuAI ACCTGC 1 cut(s) 535
BfuI GTATCC 1 cut(s) 2346
BglII AGATCT 4 cut(s) 976, 1780, 2213, 2466
Bme1390I CCNGG 5 cut(s) 155, 397, 1042, 1242, 2079
Bme18I GGWCC 2 cut(s) 151, 824
BmeRI GACNNNNNGTC 2 cut(s) 253, 1816
BmgBI CACGTC 3 cut(s) 754, 1914, 2710
BmgT120I GGNCC 4 cut(s) 151, 824, 2325, 2504
BmiI GGNNCC 5 cut(s) 469, 487, 1032, 1749, 3700
BmrFI CCNGG 5 cut(s) 155, 397, 1042, 1242, 2079
BmrI ACTGGG 2 cut(s) 2450, 3591
BmsI GCATC 7 cut(s) 112, 539, 651, 1027, 2533, 2677, 3659
BmuI ACTGGG 2 cut(s) 2450, 3591
BpiI GAAGAC 4 cut(s) 656, 1064, 1185, 2635
BpmI CTGGAG 2 cut(s) 1063, 1943
Bpu10I CCTNAGC 4 cut(s) 1952, 3030, 3207, 3387
BpuEI CTTGAG 5 cut(s) 581, 1376, 1769, 2621, 2777
BsaAI YACGTR 3 cut(s) 845, 1979, 2717
BsaI GGTCTC 1 cut(s) 43
BsaJI CCNNGG 6 cut(s) 395, 396, 859, 2334, 2826, 3713
BsaWI WCCGGW 1 cut(s) 2378
BsaXI ACNNNNNCTCC 4 cut(s) 403, 433, 1799, 1829
Bsc4I CCNNNNNNNGG 4 cut(s) 430, 1019, 2340, 2827
Bse1I ACTGG 4 cut(s) 2345, 2445, 2840, 3597
Bse21I CCTNAGG 1 cut(s) 1641
Bse3DI GCAATG 2 cut(s) 1140, 1182
BseBI CCWGG 5 cut(s) 155, 397, 1042, 1242, 2079
BseDI CCNNGG 6 cut(s) 395, 396, 859, 2334, 2826, 3713
BseGI GGATG 8 cut(s) 814, 1754, 2483, 3019, 3196, 3376, 3553, 3674
BseLI CCNNNNNNNGG 4 cut(s) 430, 1019, 2340, 2827
BseMI GCAATG 2 cut(s) 1140, 1182
BseNI ACTGG 4 cut(s) 2345, 2445, 2840, 3597
BseRI GAGGAG 5 cut(s) 266, 484, 1820, 2294, 2329
BseSI GKGCMC 1 cut(s) 998
BseYI CCCAGC 1 cut(s) 1130
BsgI GTGCAG 1 cut(s) 143
Bsh1236I CGCG 2 cut(s) 1089, 2509
BshFI GGCC 5 cut(s) 1389, 1639, 2327, 2505, 3640
BshNI GGYRCC 1 cut(s) 485
BsiHKAI GWGCWC 1 cut(s) 453
BsiSI CCGG 2 cut(s) 1028, 2379
BslFI GGGAC 1 cut(s) 938
BslI CCNNNNNNNGG 4 cut(s) 430, 1019, 2340, 2827
BsmAI GTCTC 6 cut(s) 43, 166, 2026, 2164, 2670, 3605
BsmBI CGTCTC 1 cut(s) 166
BsmFI GGGAC 1 cut(s) 938
BsmI GAATGC 2 cut(s) 1204, 1515
BsnI GGCC 5 cut(s) 1389, 1639, 2327, 2505, 3640
Bso31I GGTCTC 1 cut(s) 43
Bsp1286I GDGCHC 3 cut(s) 453, 998, 1386
Bsp1407I TGTACA 1 cut(s) 2115
Bsp19I CCATGG 1 cut(s) 2334
Bsp68I TCGCGA 1 cut(s) 1089
BspACI CCGC 8 cut(s) 158, 198, 281, 630, 639, 2255, 2411, 2507
BspANI GGCC 5 cut(s) 1389, 1639, 2327, 2505, 3640
BspFNI CGCG 2 cut(s) 1089, 2509
BspLI GGNNCC 5 cut(s) 469, 487, 1032, 1749, 3700
BspMAI CTGCAG 1 cut(s) 502
BspMI ACCTGC 1 cut(s) 535
BspPI GGATC 8 cut(s) 868, 1025, 1038, 2189, 2497, 2624, 3693, 3706
BspT107I GGYRCC 1 cut(s) 485
BspTI CTTAAG 2 cut(s) 725, 2845
BspTNI GGTCTC 1 cut(s) 43
BsrDI GCAATG 2 cut(s) 1140, 1182
BsrGI TGTACA 1 cut(s) 2115
BsrI ACTGG 4 cut(s) 2345, 2445, 2840, 3597
BssECI CCNNGG 6 cut(s) 395, 396, 859, 2334, 2826, 3713
BssNAI GTATAC 1 cut(s) 711
BssSI CACGAG 1 cut(s) 2555
BssT1I CCWWGG 4 cut(s) 859, 2334, 2826, 3713
Bst1107I GTATAC 1 cut(s) 711
Bst2BI CACGAG 1 cut(s) 2555
Bst2UI CCWGG 5 cut(s) 155, 397, 1042, 1242, 2079
Bst4CI ACNGT 9 cut(s) 66, 232, 1156, 1436, 2746, 3217, 3397, 3574, 3770
Bst6I CTCTTC 7 cut(s) 1548, 2231, 2304, 2964, 3144, 3321, 3501
BstAFI CTTAAG 2 cut(s) 725, 2845
BstAUI TGTACA 1 cut(s) 2115
BstBAI YACGTR 3 cut(s) 845, 1979, 2717
BstC8I GCNNGC 6 cut(s) 295, 490, 1301, 1305, 2507, 2548
BstDSI CCRYGG 1 cut(s) 2334
BstF5I GGATG 8 cut(s) 814, 1754, 2483, 3019, 3196, 3376, 3553, 3674
BstFNI CGCG 2 cut(s) 1089, 2509
BstH2I RGCGCY 1 cut(s) 1350
BstHHI GCGC 2 cut(s) 409, 1349
BstMAI GTCTC 6 cut(s) 43, 166, 2026, 2164, 2670, 3605
BstNI CCWGG 5 cut(s) 155, 397, 1042, 1242, 2079
BstNSI RCATGY 2 cut(s) 1259, 2122
BstSCI CCNGG 5 cut(s) 153, 395, 1040, 1240, 2077
BstSFI CTRYAG 3 cut(s) 402, 498, 1907
BstSLI GKGCMC 1 cut(s) 998
BstUI CGCG 2 cut(s) 1089, 2509
BstV2I GAAGAC 4 cut(s) 656, 1064, 1185, 2635
BstX2I RGATCY 9 cut(s) 873, 976, 1030, 1780, 2181, 2213, 2466, 2629, 3698
BstXI CCANNNNNNTGG 1 cut(s) 2335
BstYI RGATCY 9 cut(s) 873, 976, 1030, 1780, 2181, 2213, 2466, 2629, 3698
BstZ17I GTATAC 1 cut(s) 711
Bsu36I CCTNAGG 1 cut(s) 1641
BsuI GTATCC 1 cut(s) 2346
BsuRI GGCC 5 cut(s) 1389, 1639, 2327, 2505, 3640
BtgI CCRYGG 1 cut(s) 2334
BtrI CACGTC 3 cut(s) 754, 1914, 2710
BtsCI GGATG 8 cut(s) 814, 1754, 2483, 3019, 3196, 3376, 3553, 3674
BtsI GCAGTG 4 cut(s) 51, 458, 1898, 3531
BtsIMutI CAGTG 9 cut(s) 51, 271, 458, 1679, 1696, 1898, 2765, 2782, 3531
BtuMI TCGCGA 1 cut(s) 1089
BveI ACCTGC 1 cut(s) 535
Cac8I GCNNGC 6 cut(s) 295, 490, 1301, 1305, 2507, 2548
CaiI CAGNNNCTG 1 cut(s) 3760
CfoI GCGC 2 cut(s) 409, 1349
Cfr13I GGNCC 4 cut(s) 151, 824, 2325, 2504
CseI GACGC 1 cut(s) 1892
CsiI ACCWGGT 1 cut(s) 2077
Csp6I GTAC 7 cut(s) 23, 224, 2055, 2116, 2438, 2742, 3730
CspCI CAANNNNNGTGG 2 cut(s) 3702, 3737
CviQI GTAC 7 cut(s) 23, 224, 2055, 2116, 2438, 2742, 3730
DraI TTTAAA 2 cut(s) 1402, 2014
DraIII CACNNNGTG 1 cut(s) 2081
DriI GACNNNNNGTC 2 cut(s) 253, 1816
EaeI YGGCCR 1 cut(s) 3638
Eam1104I CTCTTC 7 cut(s) 1548, 2231, 2304, 2964, 3144, 3321, 3501
Eam1105I GACNNNNNGTC 2 cut(s) 253, 1816
EarI CTCTTC 7 cut(s) 1548, 2231, 2304, 2964, 3144, 3321, 3501
EciI GGCGGA 1 cut(s) 213
Eco130I CCWWGG 4 cut(s) 859, 2334, 2826, 3713
Eco24I GRGCYC 1 cut(s) 1386
Eco31I GGTCTC 1 cut(s) 43
Eco32I GATATC 1 cut(s) 2088
Eco47I GGWCC 2 cut(s) 151, 824
Eco47III AGCGCT 1 cut(s) 1348
Eco57I CTGAAG 4 cut(s) 555, 1572, 2220, 2238
Eco72I CACGTG 1 cut(s) 2717
Eco81I CCTNAGG 1 cut(s) 1641
EcoRI GAATTC 2 cut(s) 434, 2858
EcoRII CCWGG 5 cut(s) 153, 395, 1040, 1240, 2077
EcoRV GATATC 1 cut(s) 2088
EcoT14I CCWWGG 4 cut(s) 859, 2334, 2826, 3713
EcoT22I ATGCAT 1 cut(s) 1515
EcoT38I GRGCYC 1 cut(s) 1386
ErhI CCWWGG 4 cut(s) 859, 2334, 2826, 3713
Esp3I CGTCTC 1 cut(s) 166
FalI AAGNNNNNCTT 4 cut(s) 759, 791, 785, 817
FaqI GGGAC 1 cut(s) 938
FauI CCCGC 1 cut(s) 2514
FauNDI CATATG 1 cut(s) 626
FblI GTMKAC 3 cut(s) 710, 1906, 3058
FokI GGATG 8 cut(s) 821, 1741, 2490, 3026, 3203, 3383, 3560, 3681
FriOI GRGCYC 1 cut(s) 1386
GlaI GCGC 2 cut(s) 408, 1348
GsaI CCCAGC 1 cut(s) 1134
GsuI CTGGAG 2 cut(s) 1063, 1943
HaeII RGCGCY 1 cut(s) 1350
HaeIII GGCC 5 cut(s) 1389, 1639, 2327, 2505, 3640
HapII CCGG 2 cut(s) 1028, 2379
HgaI GACGC 1 cut(s) 1892
HhaI GCGC 2 cut(s) 409, 1349
Hin6I GCGC 2 cut(s) 407, 1347
HinP1I GCGC 2 cut(s) 407, 1347
HindIII AAGCTT 2 cut(s) 2450, 3607
HpaII CCGG 2 cut(s) 1028, 2379
HphI GGTGA 8 cut(s) 172, 970, 1612, 2822, 3008, 3185, 3365, 3542
Hpy99I CGWCG 1 cut(s) 2681
HpyCH4III ACNGT 9 cut(s) 66, 232, 1156, 1436, 2746, 3217, 3397, 3574, 3770
HpyCH4IV ACGT 7 cut(s) 753, 844, 1236, 1913, 1978, 2709, 2716
HpySE526I ACGT 7 cut(s) 753, 844, 1236, 1913, 1978, 2709, 2716
HspAI GCGC 2 cut(s) 407, 1347
LweI GCATC 7 cut(s) 112, 539, 651, 1027, 2533, 2677, 3659
MabI ACCWGGT 1 cut(s) 2077
MaeII ACGT 7 cut(s) 753, 844, 1236, 1913, 1978, 2709, 2716
MaeIII GTNAC 7 cut(s) 160, 583, 958, 1615, 1857, 2710, 2763
MfeI CAATTG 5 cut(s) 1416, 1997, 2137, 2176, 2189
MflI RGATCY 9 cut(s) 873, 976, 1030, 1780, 2181, 2213, 2466, 2629, 3698
MhlI GDGCHC 3 cut(s) 453, 998, 1386
MlsI TGGCCA 1 cut(s) 3640
MluNI TGGCCA 1 cut(s) 3640
MlyI GAGTC 4 cut(s) 263, 1054, 2380, 2771
MmeI TCCRAC 4 cut(s) 184, 1138, 2010, 2103
Mox20I TGGCCA 1 cut(s) 3640
Mph1103I ATGCAT 1 cut(s) 1515
MroXI GAANNNNTTC 5 cut(s) 608, 1236, 2460, 2642, 3610
MscI TGGCCA 1 cut(s) 3640
MslI CAYNNNNRTG 2 cut(s) 483, 1260
Msp20I TGGCCA 1 cut(s) 3640
MspA1I CMGCKG 1 cut(s) 127
MspCI CTTAAG 2 cut(s) 725, 2845
MspI CCGG 2 cut(s) 1028, 2379
MspR9I CCNGG 5 cut(s) 155, 397, 1042, 1242, 2079
MunI CAATTG 5 cut(s) 1416, 1997, 2137, 2176, 2189
Mva1269I GAATGC 2 cut(s) 1204, 1515
MvaI CCWGG 5 cut(s) 155, 397, 1042, 1242, 2079
MvnI CGCG 2 cut(s) 1089, 2509
NcoI CCATGG 1 cut(s) 2334
NdeI CATATG 1 cut(s) 626
NlaIV GGNNCC 5 cut(s) 469, 487, 1032, 1749, 3700
NmeAIII GCCGAG 1 cut(s) 1365
NmuCI GTSAC 6 cut(s) 160, 583, 958, 1857, 2710, 2763
NruI TCGCGA 1 cut(s) 1089
NsiI ATGCAT 1 cut(s) 1515
NspI RCATGY 2 cut(s) 1259, 2122
PaqCI CACCTGC 1 cut(s) 535
PasI CCCWGGG 1 cut(s) 396
PciI ACATGT 2 cut(s) 1255, 2118
PcsI WCGNNNNNNNCGW 1 cut(s) 3492
PctI GAATGC 2 cut(s) 1204, 1515
PdmI GAANNNNTTC 5 cut(s) 608, 1236, 2460, 2642, 3610
PflMI CCANNNNNTGG 1 cut(s) 2340
PfoI TCCNGGA 1 cut(s) 1240
PleI GAGTC 4 cut(s) 262, 1053, 2380, 2770
PmaCI CACGTG 1 cut(s) 2717
PmlI CACGTG 1 cut(s) 2717
PpsI GAGTC 4 cut(s) 262, 1053, 2380, 2770
Ppu21I YACGTR 3 cut(s) 845, 1979, 2717
PscI ACATGT 2 cut(s) 1255, 2118
PshBI ATTAAT 3 cut(s) 549, 2286, 2871
Psp1406I AACGTT 1 cut(s) 1236
Psp6I CCWGG 5 cut(s) 153, 395, 1040, 1240, 2077
PspCI CACGTG 1 cut(s) 2717
PspFI CCCAGC 1 cut(s) 1130
PspGI CCWGG 5 cut(s) 153, 395, 1040, 1240, 2077
PspN4I GGNNCC 5 cut(s) 469, 487, 1032, 1749, 3700
PspPI GGNCC 4 cut(s) 151, 824, 2325, 2504
PstI CTGCAG 1 cut(s) 502
PstNI CAGNNNCTG 1 cut(s) 3760
PsuI RGATCY 9 cut(s) 873, 976, 1030, 1780, 2181, 2213, 2466, 2629, 3698
PvuII CAGCTG 1 cut(s) 127
RruI TCGCGA 1 cut(s) 1089
RsaI GTAC 7 cut(s) 24, 225, 2056, 2117, 2439, 2743, 3731
RsaNI GTAC 7 cut(s) 23, 224, 2055, 2116, 2438, 2742, 3730
RseI CAYNNNNRTG 2 cut(s) 483, 1260
Sau96I GGNCC 4 cut(s) 151, 824, 2325, 2504
SchI GAGTC 4 cut(s) 263, 1054, 2380, 2771
ScrFI CCNGG 5 cut(s) 155, 397, 1042, 1242, 2079
SduI GDGCHC 3 cut(s) 453, 998, 1386
SexAI ACCWGGT 1 cut(s) 2077
SfaNI GCATC 7 cut(s) 112, 539, 651, 1027, 2533, 2677, 3659
SfcI CTRYAG 3 cut(s) 402, 498, 1907
SinI GGWCC 2 cut(s) 151, 824
SmiMI CAYNNNNRTG 2 cut(s) 483, 1260
SmlI CTYRAG 7 cut(s) 596, 725, 1391, 1784, 2600, 2792, 2845
SmoI CTYRAG 7 cut(s) 596, 725, 1391, 1784, 2600, 2792, 2845
SpeI ACTAGT 2 cut(s) 1861, 2155
SsiI CCGC 8 cut(s) 158, 198, 281, 630, 639, 2255, 2411, 2507
SspI AATATT 1 cut(s) 547
StyD4I CCNGG 5 cut(s) 153, 395, 1040, 1240, 2077
StyI CCWWGG 4 cut(s) 859, 2334, 2826, 3713
TaaI ACNGT 9 cut(s) 66, 232, 1156, 1436, 2746, 3217, 3397, 3574, 3770
TaiI ACGT 7 cut(s) 756, 847, 1239, 1916, 1981, 2712, 2719
TaqI TCGA 6 cut(s) 702, 1077, 2646, 2676, 3486, 3663
TatI WGTACW 2 cut(s) 2115, 2437
TauI GCSGC 3 cut(s) 284, 633, 642
TscAI CASTG 9 cut(s) 51, 271, 465, 1686, 1696, 1905, 2772, 2782, 3531
TseFI GTSAC 6 cut(s) 160, 583, 958, 1857, 2710, 2763
Tsp45I GTSAC 6 cut(s) 160, 583, 958, 1857, 2710, 2763
TspGWI ACGGA 4 cut(s) 126, 602, 2072, 3691
TspRI CASTG 9 cut(s) 51, 271, 465, 1686, 1696, 1905, 2772, 2782, 3531
Van91I CCANNNNNTGG 1 cut(s) 2340
Vha464I CTTAAG 2 cut(s) 725, 2845
VpaK11BI GGWCC 2 cut(s) 151, 824
VspI ATTAAT 3 cut(s) 549, 2286, 2871
XapI RAATTY 5 cut(s) 434, 1006, 2017, 2620, 2858
XbaI TCTAGA 2 cut(s) 1727, 2854
XceI RCATGY 2 cut(s) 1259, 2122
XcmI CCANNNNNNNNNTGG 2 cut(s) 36, 918
XmiI GTMKAC 3 cut(s) 710, 1906, 3058
XmnI GAANNNNTTC 5 cut(s) 608, 1236, 2460, 2642, 3610
Zsp2I ATGCAT 1 cut(s) 1515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.