Rmu_sc0000301.1_g000009

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000301.1
OG0000203
Physical Location & Seq
Forward (+)
28306 .. 33133
4828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000301.1_g000009.1.cds

Sequence Viewer

Length: 4311 bp
atggatattattctagcattggtacaaccattggcagaatgggcagcgagaccaattcggcgacagttgagttatgtgtttcactacaagagcaacattgagcatctcaatgaacaggttctgctgctgcgtgaaaagagagaaggagtggacctgggggtgacaaatgcgagacgagctttacagagaattgatggcggagttggaagatggctggacgaggtacacacagtcttagaagaaaaggacaaggagtcgtgtttcagtgaaaaaaatgtagcggcaaaggcagcgtgctgtaatgggtggcttccaaatatcaagtgtcgttattctttgggaaggaaagctaagaagatgactgcgaaggtggataatcttcttgctaatgaacccagggctatagcgcatcctgctgctccccctttggtggaattcaaacccacagagcactctacactgctcggaaccaacttccatgaaggtgccagctcctctgcaggaacatcaacccaagaacagccacctgcatctgaagcaatgaatattaattttgattcaagaagatcaaccattagagatgtgatggaagctctcaaggggaaacgattcaatccgataatcatatgcggcatgggcggcatcgggaagacgacattgatggggcaagtctttgagaaagcaaaggaagaaggtctgttcgatgagtatacaaaggcaaccttatctcttgacaaagctcctgacgtgattcagattcaagatgaacttgctcaatatctaggcctgccacttgaaggaaaagagagtggtagagcaaataagctccgtgaaagattatcccaaggcagcaagaagatccttgtaatgttagacaatgtttccacaacaacccgagactttttgtgggacatagggattccccttagttgtaaacttttggtgacatcaagacaacaagatctattcaaggacatggacacaagaaagaatttccccattcatggtttgccggatcctgatgcctggagtctgtttaagaagacagcaggaagttctatcgaatctgatcgagagttagaagctgtagcaaaagaggttttgaaggaatgtgctgggttacccattgcaatttcaactgttggaactgcactaaaaggtgaaaacattgcagtttggaagaatgcacaaagtgaactaaagaaggctaacccagaaaacgttccaggagtgatagaacatgtgtatggcaaaatcaagttcagctatgaatgtttaccaagcaaggaagccaaatcatgctttttgctgtgttgcatatttgaagaaagtgctgatataaagatagaagatttggttagatatgggctcggtctcatgctctttgaaggcattgattcaatggttgaaggaagaaaccgtatggagacattggttcagatactcaaaagtcgctttttcttcttagagagcgataagaaagagtgtgtgagaatgcatgatgtggtgcgtgatgttgccgtgcatatagcttctgaagagtttgtagaaaagaaaaatgatggggttgaaaagagaattgtgatgagagacaaagcagaaactgtgaagttgatggattggccaaatgatagtggttctgagcgatctatttattgcagttcactgagtattagtgggctttgtcagcttttattgttgagaactctatctacagataaacttccattggagcctccatccacaattttcaatagaatggaagatctcaaggttctagcaataattcagaagagatcgattttacatcgagttttcagaatgcatctgttgtcactagtgccatcacttgcagttttgaaaaaccttcaaacattgcgtctagaggggtgcgatctagagtgtgatgtatctgtcattggggagctaaggacactcatgatacttagtttgcgtgaatccaacatcaagcaattacctgatacatttaaaaatttgtctaatttgagattgcttgatttgtccaaatgtgggaagcttcaaataatcccaccaggtatgatatcaagtttatcccgactagaagaattgttcatgtcggaaagtttttataattgggtgtctgataaactagtctcgaccgaaacaaccaattggatctctcaattggttgctgaagaaagagctggatccgaagaagtggacaagtggaagagaatcaacacattggcagttgaacaactagccaaccaagaggtgattaatgggcttgttgaagaatgtgaagagaggagaaggtgggccaagtccatggactggacaagtgggatactttcagaactactttccttgtccggtttgactcgtttaactgtttttctaccaccgcttgatattctgctgacaaccgatgtactgggcaagaagcttgaaagatttcagatctctttaggatggactaatccatcgacatttgaagtcccgccgccttctgagaactacttgagagtttttgatcttgatgcaagctcactcgtgggtagtaaaatcagttggttgctaaacaaaactaacaagtttgtgttaagcatgaagaatttgacagatcctctgaatgtcttcgattttgcaaacttgaattgtcttgaactctacggctgtgatgctctggaatatctgattgacgtgacacgtgtaaaccacgctactccacgcagtaccgtctttcccgtcttggagtcactgcgagtcggtggtgcaacaaggctgaaggagatttgtcatggtgagctgctccacaccaagattccagtcttaagaagtctagtagcgatgtcaattgggggttgtcatagtttgagaactctgctctctccttcaatcgccagaggtcttgtgaagctccaaagactagagattggaaactgcgagaagattgaagagatagtagcagcagcagagggtgatgaagaaacagaggatgacaacatcttccctcagctgacagaattgtcgcttcaaaatctacccaatctcagaactctactctctccttcaatcgccagaggtcttgtgaagctccaaagactaaagattggaaactgcaagaagattgaagagatagtagcagcagcagagggtgatgaagaaacagaggatgacaacatcttccctcagctgacagaattgtcgcttcaaaatctacccaatctcagaactctactctctccttcaatcgccagaggtcttgtgaagctccaaagactaaagattggaaactgcaagaagattgaagagatagtagcagcagcagagggtgatgaagaaacagaggatgacaacatcttccctcagctaacagaattgtcgcttcaaaatctacccaatctcagaactctgctctccccttcaatcgccagaggtcttgtgaagctcaaagcactatgtatctttggctgtgagaagattgaagagatagtagcagcggcagagggtgatgaagaaacagaggatgacaacatcttccctcagctgacagaattgtcgcttcaaaatctacccaatctcagaactctactctctccttcaatcgccagaggtcttgtgaagctccaaagactaaagattggaaactgcaagaagattgaagagatagtagcagcagcagagggtgatgaagaaacagaggatcacaacatcttccctcagctggcagaattgtcgcttcaaaatctacccaatctcagaactctgctctccccttcaatcgccagaggtcttgtgaagctccaaagactaaagattggaaactgcaagaagattgaagagatagtagcagcagcagagggtgatgaagaaacagaggatcacaacatcttccctcagctaacagtattgtatcttcaaaatctacccaatctcagaagcttttcgcaaggcaaatgtaatttcaaatggccgctagtgaaatttataagaatcagcggatgctgcaatatgaagaagttttgtttcggatccgtcagcataccatgggaagtgcgattggacgtcagcgatgttggtgagaatgttttgcaggagctgaacaacaggacgcctgcttctccttcttcaaaatcacgactcaccaaccggagtgtagacattgcccaccaggtgttcgatgaaatggcgcttagggactacttcaactctcatggatgggccatcatggtagttgcttatgcccaaaatgccaattcattccccagaggccttgccgcaccaacaccaataccatgtcagtgtccaatttcttcttttacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1436

Amino Acids

160.51

Weight (kDa)

5.68

Isoelectric Point (pI)

52.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2112, 3974
AarI CACCTGC 1 cut(s) 535
AasI GACNNNNNNGTC 3 cut(s) 3010, 3187, 3541
AatII GACGTC 1 cut(s) 4053
Acc36I ACCTGC 1 cut(s) 535
AccB1I GGYRCC 1 cut(s) 485
AccB7I CCANNNNNTGG 1 cut(s) 2316
AccI GTMKAC 2 cut(s) 710, 4143
AclI AACGTT 1 cut(s) 1221
AcoI YGGCCR 2 cut(s) 1622, 3956
AcsI RAATTY 5 cut(s) 434, 991, 1993, 2596, 3968
AcuI CTGAAG 4 cut(s) 555, 1557, 2196, 2789
AcvI CACGTG 1 cut(s) 2693
AcyI GRCGYC 2 cut(s) 4050, 4097
AdeI CACNNNGTG 2 cut(s) 1193, 4159
AfaI GTAC 4 cut(s) 24, 225, 2415, 2719
AfiI CCNNNNNNNGG 6 cut(s) 430, 797, 1004, 2031, 2316, 3709
AflII CTTAAG 1 cut(s) 2815
AflIII ACRYGT 3 cut(s) 1240, 2690, 2692
AhdI GACNNNNNGTC 1 cut(s) 253
AhlI ACTAGT 2 cut(s) 1837, 2131
AjiI CACGTC 2 cut(s) 748, 2686
AjnI CCWGG 6 cut(s) 153, 395, 1025, 1225, 2053, 4155
Alw21I GWGCWC 1 cut(s) 453
Alw26I GTCTC 7 cut(s) 43, 166, 891, 1379, 1421, 1584, 2140
AlwNI CAGNNNCTG 3 cut(s) 121, 1604, 4084
Ama87I CYCGRG 1 cut(s) 894
AoxI GGCC 6 cut(s) 784, 1622, 2301, 3956, 4206, 4255
ApoI RAATTY 5 cut(s) 434, 991, 1993, 2596, 3968
ArsI GACNNNNNNTTYG 2 cut(s) 1864, 1896
AseI ATTAAT 2 cut(s) 549, 2262
Asp700I GAANNNNTTC 6 cut(s) 117, 608, 1221, 2436, 2618, 3928
AspLEI GCGC 2 cut(s) 409, 4177
AspS9I GGNCC 3 cut(s) 151, 2301, 4206
AvaI CYCGRG 1 cut(s) 894
AvaII GGWCC 1 cut(s) 151
BalI TGGCCA 1 cut(s) 1624
BamHI GGATCC 3 cut(s) 1015, 2189, 4016
BanI GGYRCC 1 cut(s) 485
BanII GRGCYC 1 cut(s) 1371
BarI GAAGNNNNNNTAC 2 cut(s) 3885, 3917
BauI CACGAG 1 cut(s) 2534
BbrPI CACGTG 1 cut(s) 2693
BbsI GAAGAC 3 cut(s) 656, 1049, 2611
Bbv12I GWGCWC 1 cut(s) 453
BbvCI CCTCAGC 6 cut(s) 2997, 3174, 3351, 3528, 3705, 3882
BceAI ACGGC 2 cut(s) 1505, 2671
BcgI CGANNNNNNTGC 2 cut(s) 3702, 3736
BciT130I CCWGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
BciVI GTATCC 1 cut(s) 2322
BcoDI GTCTC 7 cut(s) 43, 166, 891, 1379, 1421, 1584, 2140
BcuI ACTAGT 2 cut(s) 1837, 2131
BfmI CTRYAG 4 cut(s) 402, 498, 1086, 1713
BfoI RGCGCY 1 cut(s) 4178
BfrI CTTAAG 1 cut(s) 2815
BfuAI ACCTGC 1 cut(s) 535
BfuI GTATCC 1 cut(s) 2322
BglII AGATCT 3 cut(s) 961, 1765, 2442
Bme1390I CCNGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
Bme18I GGWCC 1 cut(s) 151
BmeRI GACNNNNNGTC 1 cut(s) 253
BmeT110I CYCGRG 1 cut(s) 894
BmgBI CACGTC 2 cut(s) 748, 2686
BmgT120I GGNCC 3 cut(s) 151, 2301, 4206
BmiI GGNNCC 6 cut(s) 469, 487, 1017, 1734, 2191, 4018
BmrFI CCNGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
BmrI ACTGGG 1 cut(s) 2426
BmsI GCATC 9 cut(s) 112, 418, 539, 651, 1012, 1834, 2512, 2653, 3977
BmuI ACTGGG 1 cut(s) 2426
BpiI GAAGAC 3 cut(s) 656, 1049, 2611
BpmI CTGGAG 1 cut(s) 1048
Bpu10I CCTNAGC 8 cut(s) 1928, 2997, 3174, 3351, 3528, 3705, 3882, 4178
BpuEI CTTGAG 3 cut(s) 581, 1754, 2524
Bsa29I ATCGAT 1 cut(s) 1799
BsaAI YACGTR 1 cut(s) 2693
BsaHI GRCGYC 2 cut(s) 4050, 4097
BsaI GGTCTC 2 cut(s) 43, 1379
BsaJI CCNNGG 6 cut(s) 154, 395, 396, 844, 2310, 4031
BsaWI WCCGGW 2 cut(s) 2354, 4134
Bsc4I CCNNNNNNNGG 6 cut(s) 430, 797, 1004, 2031, 2316, 3709
Bse1I ACTGG 3 cut(s) 2321, 2421, 2810
Bse3DI GCAATG 5 cut(s) 546, 1125, 1167, 1874, 4146
BseBI CCWGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
BseCI ATCGAT 1 cut(s) 1799
BseDI CCNNGG 6 cut(s) 154, 395, 396, 844, 2310, 4031
BseGI GGATG 9 cut(s) 409, 1739, 2459, 2986, 3163, 3340, 3517, 3992, 4208
BseLI CCNNNNNNNGG 6 cut(s) 430, 797, 1004, 2031, 2316, 3709
BseMI GCAATG 5 cut(s) 546, 1125, 1167, 1874, 4146
BseNI ACTGG 3 cut(s) 2321, 2421, 2810
BseRI GAGGAG 2 cut(s) 484, 2305
BseYI CCCAGC 1 cut(s) 1115
BsgI GTGCAG 1 cut(s) 1134
Bsh1285I CGRYCG 1 cut(s) 2142
BshFI GGCC 6 cut(s) 786, 1624, 2303, 3958, 4208, 4257
BshNI GGYRCC 1 cut(s) 485
BshVI ATCGAT 1 cut(s) 1799
BsiEI CGRYCG 1 cut(s) 2142
BsiHKAI GWGCWC 1 cut(s) 453
BsiHKCI CYCGRG 1 cut(s) 894
BsiSI CCGG 3 cut(s) 1013, 2355, 4135
BslFI GGGAC 3 cut(s) 923, 2465, 4196
BslI CCNNNNNNNGG 6 cut(s) 430, 797, 1004, 2031, 2316, 3709
BsmAI GTCTC 7 cut(s) 43, 166, 891, 1379, 1421, 1584, 2140
BsmBI CGTCTC 1 cut(s) 166
BsmFI GGGAC 3 cut(s) 923, 2465, 4196
BsmI GAATGC 3 cut(s) 1189, 1500, 1827
BsnI GGCC 6 cut(s) 786, 1624, 2303, 3958, 4208, 4257
Bso31I GGTCTC 2 cut(s) 43, 1379
BsoBI CYCGRG 1 cut(s) 894
Bsp1286I GDGCHC 2 cut(s) 453, 1371
Bsp19I CCATGG 2 cut(s) 2310, 4031
BspANI GGCC 6 cut(s) 786, 1624, 2303, 3958, 4208, 4257
BspDI ATCGAT 1 cut(s) 1799
BspHI TCATGA 1 cut(s) 1938
BspLI GGNNCC 6 cut(s) 469, 487, 1017, 1734, 2191, 4018
BspMAI CTGCAG 1 cut(s) 502
BspMI ACCTGC 1 cut(s) 535
BspT107I GGYRCC 1 cut(s) 485
BspTI CTTAAG 1 cut(s) 2815
BspTNI GGTCTC 2 cut(s) 43, 1379
BsrDI GCAATG 5 cut(s) 546, 1125, 1167, 1874, 4146
BsrI ACTGG 3 cut(s) 2321, 2421, 2810
BssECI CCNNGG 6 cut(s) 154, 395, 396, 844, 2310, 4031
BssNAI GTATAC 1 cut(s) 711
BssNI GRCGYC 2 cut(s) 4050, 4097
BssSI CACGAG 1 cut(s) 2534
BssT1I CCWWGG 3 cut(s) 844, 2310, 4031
Bst1107I GTATAC 1 cut(s) 711
Bst2BI CACGAG 1 cut(s) 2534
Bst2UI CCWGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
Bst4CI ACNGT 8 cut(s) 66, 232, 1141, 1421, 1606, 2374, 2722, 3892
BstACI GRCGYC 2 cut(s) 4050, 4097
BstAFI CTTAAG 1 cut(s) 2815
BstBAI YACGTR 1 cut(s) 2693
BstC8I GCNNGC 6 cut(s) 295, 490, 788, 2527, 3711, 4101
BstDSI CCRYGG 2 cut(s) 2310, 4031
BstEII GGTNACC 1 cut(s) 1119
BstF5I GGATG 9 cut(s) 409, 1739, 2459, 2986, 3163, 3340, 3517, 3992, 4208
BstH2I RGCGCY 1 cut(s) 4178
BstHHI GCGC 2 cut(s) 409, 4177
BstMAI GTCTC 7 cut(s) 43, 166, 891, 1379, 1421, 1584, 2140
BstMCI CGRYCG 1 cut(s) 2142
BstNI CCWGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
BstNSI RCATGY 1 cut(s) 1244
BstPI GGTNACC 1 cut(s) 1119
BstSCI CCNGG 6 cut(s) 153, 395, 1025, 1225, 2053, 4155
BstSFI CTRYAG 4 cut(s) 402, 498, 1086, 1713
BstV2I GAAGAC 3 cut(s) 656, 1049, 2611
BstX2I RGATCY 9 cut(s) 858, 961, 1015, 1765, 2157, 2189, 2442, 2605, 4016
BstXI CCANNNNNNTGG 1 cut(s) 2311
BstYI RGATCY 9 cut(s) 858, 961, 1015, 1765, 2157, 2189, 2442, 2605, 4016
BstZ17I GTATAC 1 cut(s) 711
Bsu15I ATCGAT 1 cut(s) 1799
BsuI GTATCC 1 cut(s) 2322
BsuRI GGCC 6 cut(s) 786, 1624, 2303, 3958, 4208, 4257
BsuTUI ATCGAT 1 cut(s) 1799
BtgI CCRYGG 2 cut(s) 2310, 4031
BtgZI GCGATG 2 cut(s) 2846, 4071
BtrI CACGTC 2 cut(s) 748, 2686
BtsCI GGATG 9 cut(s) 409, 1739, 2459, 2986, 3163, 3340, 3517, 3992, 4208
BtsI GCAGTG 2 cut(s) 458, 2741
BtsIMutI CAGTG 5 cut(s) 271, 458, 1664, 2741, 4292
BveI ACCTGC 1 cut(s) 535
Cac8I GCNNGC 6 cut(s) 295, 490, 788, 2527, 3711, 4101
CaiI CAGNNNCTG 3 cut(s) 121, 1604, 4084
CciI TCATGA 1 cut(s) 1938
CfoI GCGC 2 cut(s) 409, 4177
Cfr13I GGNCC 3 cut(s) 151, 2301, 4206
ClaI ATCGAT 1 cut(s) 1799
CseI GACGC 2 cut(s) 1868, 4105
CsiI ACCWGGT 2 cut(s) 2053, 4155
Csp6I GTAC 4 cut(s) 23, 224, 2414, 2718
CviQI GTAC 4 cut(s) 23, 224, 2414, 2718
DraI TTTAAA 1 cut(s) 1990
DraIII CACNNNGTG 2 cut(s) 1193, 4159
DrdI GACNNNNNNGTC 3 cut(s) 3010, 3187, 3541
DriI GACNNNNNGTC 1 cut(s) 253
DseDI GACNNNNNNGTC 3 cut(s) 3010, 3187, 3541
EaeI YGGCCR 2 cut(s) 1622, 3956
Eam1105I GACNNNNNGTC 1 cut(s) 253
EciI GGCGGA 1 cut(s) 213
Eco130I CCWWGG 3 cut(s) 844, 2310, 4031
Eco147I AGGCCT 2 cut(s) 786, 4257
Eco24I GRGCYC 1 cut(s) 1371
Eco31I GGTCTC 2 cut(s) 43, 1379
Eco32I GATATC 1 cut(s) 2064
Eco47I GGWCC 1 cut(s) 151
Eco57I CTGAAG 4 cut(s) 555, 1557, 2196, 2789
Eco72I CACGTG 1 cut(s) 2693
Eco88I CYCGRG 1 cut(s) 894
Eco91I GGTNACC 1 cut(s) 1119
EcoO65I GGTNACC 1 cut(s) 1119
EcoRI GAATTC 1 cut(s) 434
EcoRII CCWGG 6 cut(s) 153, 395, 1025, 1225, 2053, 4155
EcoRV GATATC 1 cut(s) 2064
EcoT14I CCWWGG 3 cut(s) 844, 2310, 4031
EcoT22I ATGCAT 2 cut(s) 1500, 1827
EcoT38I GRGCYC 1 cut(s) 1371
ErhI CCWWGG 3 cut(s) 844, 2310, 4031
Esp3I CGTCTC 1 cut(s) 166
FalI AAGNNNNNCTT 4 cut(s) 707, 739, 753, 785
FaqI GGGAC 3 cut(s) 923, 2465, 4196
FauI CCCGC 1 cut(s) 2490
FauNDI CATATG 1 cut(s) 626
FblI GTMKAC 2 cut(s) 710, 4143
FokI GGATG 9 cut(s) 396, 1726, 2466, 2993, 3170, 3347, 3524, 3999, 4215
FriOI GRGCYC 1 cut(s) 1371
GlaI GCGC 2 cut(s) 408, 4176
GsaI CCCAGC 1 cut(s) 1119
GsuI CTGGAG 1 cut(s) 1048
HaeII RGCGCY 1 cut(s) 4178
HaeIII GGCC 6 cut(s) 786, 1624, 2303, 3958, 4208, 4257
HapII CCGG 3 cut(s) 1013, 2355, 4135
HgaI GACGC 2 cut(s) 1868, 4105
HhaI GCGC 2 cut(s) 409, 4177
Hin1I GRCGYC 2 cut(s) 4050, 4097
Hin6I GCGC 2 cut(s) 407, 4175
HinP1I GCGC 2 cut(s) 407, 4175
HindIII AAGCTT 3 cut(s) 2036, 2426, 3925
HpaII CCGG 3 cut(s) 1013, 2355, 4135
HpyCH4III ACNGT 8 cut(s) 66, 232, 1141, 1421, 1606, 2374, 2722, 3892
HpyCH4IV ACGT 5 cut(s) 747, 1221, 2685, 2692, 4050
HpySE526I ACGT 5 cut(s) 747, 1221, 2685, 2692, 4050
Hsp92I GRCGYC 2 cut(s) 4050, 4097
HspAI GCGC 2 cut(s) 407, 4175
LweI GCATC 9 cut(s) 112, 418, 539, 651, 1012, 1834, 2512, 2653, 3977
MabI ACCWGGT 2 cut(s) 2053, 4155
MaeII ACGT 5 cut(s) 747, 1221, 2685, 2692, 4050
MaeIII GTNAC 6 cut(s) 160, 943, 1119, 1833, 2686, 2739
MfeI CAATTG 3 cut(s) 2152, 2165, 2838
MflI RGATCY 9 cut(s) 858, 961, 1015, 1765, 2157, 2189, 2442, 2605, 4016
MhlI GDGCHC 2 cut(s) 453, 1371
MlsI TGGCCA 1 cut(s) 1624
MluNI TGGCCA 1 cut(s) 1624
MlyI GAGTC 6 cut(s) 263, 1039, 2356, 2747, 2757, 4119
MmeI TCCRAC 4 cut(s) 184, 1123, 1986, 2079
Mox20I TGGCCA 1 cut(s) 1624
Mph1103I ATGCAT 2 cut(s) 1500, 1827
MroXI GAANNNNTTC 6 cut(s) 117, 608, 1221, 2436, 2618, 3928
MscI TGGCCA 1 cut(s) 1624
MseI TTAA 7 cut(s) 549, 1038, 1989, 2262, 2369, 2585, 2816
MslI CAYNNNNRTG 4 cut(s) 108, 483, 1245, 4285
Msp20I TGGCCA 1 cut(s) 1624
MspA1I CMGCKG 6 cut(s) 3001, 3178, 3485, 3532, 3709, 3984
MspCI CTTAAG 1 cut(s) 2815
MspI CCGG 3 cut(s) 1013, 2355, 4135
MspR9I CCNGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
MunI CAATTG 3 cut(s) 2152, 2165, 2838
Mva1269I GAATGC 3 cut(s) 1189, 1500, 1827
MvaI CCWGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
NcoI CCATGG 2 cut(s) 2310, 4031
NdeI CATATG 1 cut(s) 626
NlaIV GGNNCC 6 cut(s) 469, 487, 1017, 1734, 2191, 4018
NmuCI GTSAC 5 cut(s) 160, 943, 1833, 2686, 2739
NsiI ATGCAT 2 cut(s) 1500, 1827
NspI RCATGY 1 cut(s) 1244
PagI TCATGA 1 cut(s) 1938
PaqCI CACCTGC 1 cut(s) 535
PasI CCCWGGG 1 cut(s) 396
PceI AGGCCT 2 cut(s) 786, 4257
PciI ACATGT 1 cut(s) 1240
PctI GAATGC 3 cut(s) 1189, 1500, 1827
PdmI GAANNNNTTC 6 cut(s) 117, 608, 1221, 2436, 2618, 3928
PflMI CCANNNNNTGG 1 cut(s) 2316
PfoI TCCNGGA 1 cut(s) 1225
PleI GAGTC 6 cut(s) 262, 1038, 2356, 2746, 2756, 4119
PmaCI CACGTG 1 cut(s) 2693
PmlI CACGTG 1 cut(s) 2693
PpsI GAGTC 6 cut(s) 262, 1038, 2356, 2746, 2756, 4119
Ppu21I YACGTR 1 cut(s) 2693
PscI ACATGT 1 cut(s) 1240
PshBI ATTAAT 2 cut(s) 549, 2262
PsiI TTATAA 2 cut(s) 2112, 3974
Psp1406I AACGTT 1 cut(s) 1221
Psp6I CCWGG 6 cut(s) 153, 395, 1025, 1225, 2053, 4155
PspCI CACGTG 1 cut(s) 2693
PspEI GGTNACC 1 cut(s) 1119
PspFI CCCAGC 1 cut(s) 1115
PspGI CCWGG 6 cut(s) 153, 395, 1025, 1225, 2053, 4155
PspN4I GGNNCC 6 cut(s) 469, 487, 1017, 1734, 2191, 4018
PspPI GGNCC 3 cut(s) 151, 2301, 4206
PsrI GAACNNNNNNTAC 2 cut(s) 1696, 1728
PstI CTGCAG 1 cut(s) 502
PstNI CAGNNNCTG 3 cut(s) 121, 1604, 4084
PsuI RGATCY 9 cut(s) 858, 961, 1015, 1765, 2157, 2189, 2442, 2605, 4016
PvuII CAGCTG 4 cut(s) 3001, 3178, 3532, 3709
RsaI GTAC 4 cut(s) 24, 225, 2415, 2719
RsaNI GTAC 4 cut(s) 23, 224, 2414, 2718
RseI CAYNNNNRTG 4 cut(s) 108, 483, 1245, 4285
SaqAI TTAA 7 cut(s) 549, 1038, 1989, 2262, 2369, 2585, 2816
Sau96I GGNCC 3 cut(s) 151, 2301, 4206
SchI GAGTC 6 cut(s) 263, 1039, 2356, 2747, 2757, 4119
ScrFI CCNGG 6 cut(s) 155, 397, 1027, 1227, 2055, 4157
SduI GDGCHC 2 cut(s) 453, 1371
SexAI ACCWGGT 2 cut(s) 2053, 4155
SfaNI GCATC 9 cut(s) 112, 418, 539, 651, 1012, 1834, 2512, 2653, 3977
SfcI CTRYAG 4 cut(s) 402, 498, 1086, 1713
SinI GGWCC 1 cut(s) 151
SmiMI CAYNNNNRTG 4 cut(s) 108, 483, 1245, 4285
SmlI CTYRAG 4 cut(s) 596, 1769, 2503, 2815
SmoI CTYRAG 4 cut(s) 596, 1769, 2503, 2815
SpeI ACTAGT 2 cut(s) 1837, 2131
SseBI AGGCCT 2 cut(s) 786, 4257
SspI AATATT 1 cut(s) 547
StuI AGGCCT 2 cut(s) 786, 4257
StyD4I CCNGG 6 cut(s) 153, 395, 1025, 1225, 2053, 4155
StyI CCWWGG 3 cut(s) 844, 2310, 4031
TaaI ACNGT 8 cut(s) 66, 232, 1141, 1421, 1606, 2374, 2722, 3892
TaiI ACGT 5 cut(s) 750, 1224, 2688, 2695, 4053
TaqI TCGA 9 cut(s) 702, 1062, 1072, 1799, 1810, 2138, 2468, 2622, 4164
TaqII GACCGA 2 cut(s) 1361, 2156
TatI WGTACW 1 cut(s) 2413
TauI GCSGC 7 cut(s) 284, 633, 642, 2488, 3488, 3961, 4265
Tru1I TTAA 7 cut(s) 549, 1038, 1989, 2262, 2369, 2585, 2816
Tru9I TTAA 7 cut(s) 549, 1038, 1989, 2262, 2369, 2585, 2816
TscAI CASTG 5 cut(s) 271, 465, 1671, 2748, 4292
TseFI GTSAC 5 cut(s) 160, 943, 1833, 2686, 2739
Tsp45I GTSAC 5 cut(s) 160, 943, 1833, 2686, 2739
TspGWI ACGGA 2 cut(s) 818, 4009
TspRI CASTG 5 cut(s) 271, 465, 1671, 2748, 4292
Van91I CCANNNNNTGG 1 cut(s) 2316
Vha464I CTTAAG 1 cut(s) 2815
VpaK11BI GGWCC 1 cut(s) 151
VspI ATTAAT 2 cut(s) 549, 2262
XapI RAATTY 5 cut(s) 434, 991, 1993, 2596, 3968
XbaI TCTAGA 2 cut(s) 1882, 1897
XceI RCATGY 1 cut(s) 1244
XcmI CCANNNNNNNNNTGG 1 cut(s) 36
XmiI GTMKAC 2 cut(s) 710, 4143
XmnI GAANNNNTTC 6 cut(s) 117, 608, 1221, 2436, 2618, 3928
ZraI GACGTC 1 cut(s) 4051
Zsp2I ATGCAT 2 cut(s) 1500, 1827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.