Rh7DG054700

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000203
Physical Location & Seq
Reverse (-)
4252995 .. 4260378
7384 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG054700.1

Sequence Viewer

Length: 1263 bp
ATGACTGATGAGGTGGATAAACTCCTTGCTAATGAACCCAGGACTATAGCGCATCCTGCTCTTCATCCAGAGGTGGAATTCCAACCCACAGAGGACTTATTGCATGAAGGTGGCAGCTCCTCAGATACATCAAACCAAGAACAGGTACCTCCATATGAAGGAAAAAATATTAATTTTGATTCAAGAAGATCAACCATTAGAGATGTGATGGAAGCTCTCAAGGGGAATCAATTCAATCCGATTATCATATGCGGCATGGGAGGCATTGAGAAGACAACATTGATGGGGCAAATTTTTGAGAAAGCGAAGGAAGAGGGTCTGTTCGATGAGTATACAAAGGCAACCGTTAAGGAATCTCTTGACAAAGCTCCTGACGTGATTCAGATTCAAGGTGAACTTGCAGAATATCTAGGCAAGAAGATCCTTGAGGACGAAAAAGAGAGAGGTCGAAGAGCAAGTAAGCTACGCCAAAGATTATCTCAAGGTAATAAGAAGATCCTTGTAATGTTAGACAATGTTTCAACAACAACCTCAGACCTTTTGTGGGAAATAGGGATTCCCCCTAGTTGTAAACTTCTGGTCACATCAGGGCAACAAGATCTATTCAAGGACATGGACAGAAGAAAGAACTTTTCAATTGATGGTTTGCCAAATAGAGATGCCTGGAGTCTATTTAAGAAGACAGCAGGAAGTGCCATCGAATCTGATCTCGAGTTGCATGTTGTAGCAGAAAAGGTTCTGGAGGAATGTGCTGGGTTGCCAATTGCAATTTCAACTATTGGAATGGCACTAAAAGGTGAAAGCATTGCAATTTGGAAGAATGCACTAAAGGAACTAGAAAAGGCTAGCCCAGAAAAACGTTCCGGGAGTGATAGAACATGTGTATGTGAGCTAAAAATAATACCACCAGGTGTTATATCAAGTTTATCTCCATTAAAGGAATTATGCATGTTGCATAGCTTCGAGGATTGGGTAGTTGAGAAACTAGCCTCGATCGAAACAACCAATTGGATCTTTCAATTGGAGGCTGAGGAGAGAGTTGATGAATCCAAAGAAGTGGACTATCGGGAAACGTTACTGGACACGTGGAAGAGATTCAACAGATTGGCGGTTGAGCAACCAGCAAACATAGGAAACCAGTTTAGAAAAGAGGTTCAAGGTCTGGACAGAGCAAACGATGAGCACACAAGGTGGGCTAACTCCATGGACTGGAAAACTGGGATAGTGGGATACTTGCAAAGTTACTTTCCTTGTCCCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

420

Amino Acids

47.36

Weight (kDa)

5.08

Isoelectric Point (pI)

38.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 64 - 231 2.8e-17 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 145
AccB1I GGYRCC 1 cut(s) 145
AccB7I CCANNNNNTGG 1 cut(s) 1209
AccI GTMKAC 1 cut(s) 332
AciI CCGC 2 cut(s) 252, 1109
AclI AACGTT 2 cut(s) 859, 1073
AclWI GGATC 3 cut(s) 415, 490, 1019
AcsI RAATTY 2 cut(s) 77, 291
AcvI CACGTG 1 cut(s) 1086
AdeI CACNNNGTG 2 cut(s) 911, 1191
AfaI GTAC 1 cut(s) 147
AfiI CCNNNNNNNGG 4 cut(s) 142, 158, 544, 1209
AflIII ACRYGT 2 cut(s) 878, 1083
AjiI CACGTC 1 cut(s) 376
AjnI CCWGG 3 cut(s) 38, 662, 907
AjuI GAANNNNNNNTTGG 2 cut(s) 754, 786
AluBI AGCT 6 cut(s) 117, 215, 368, 463, 892, 960
AluI AGCT 6 cut(s) 117, 215, 368, 463, 892, 960
Alw21I GWGCWC 1 cut(s) 1185
AlwI GGATC 3 cut(s) 415, 490, 1019
Ama87I CYCGRG 1 cut(s) 710
ApeKI GCWGC 1 cut(s) 114
ApoI RAATTY 2 cut(s) 77, 291
AseI ATTAAT 1 cut(s) 171
Asp700I GAANNNNTTC 3 cut(s) 230, 735, 1094
Asp718I GGTACC 1 cut(s) 145
AspLEI GCGC 1 cut(s) 52
AsuC2I CCSGG 1 cut(s) 865
AsuHPI GGTGA 2 cut(s) 404, 809
AsuNHI GCTAGC 1 cut(s) 845
AvaI CYCGRG 1 cut(s) 710
BanI GGYRCC 1 cut(s) 145
BbrPI CACGTG 1 cut(s) 1086
BbsI GAAGAC 2 cut(s) 278, 686
Bbv12I GWGCWC 1 cut(s) 1185
BbvCI CCTCAGC 1 cut(s) 1029
BbvI GCAGC 1 cut(s) 126
BccI CCATC 4 cut(s) 202, 277, 635, 704
BciT130I CCWGG 3 cut(s) 40, 664, 909
BciVI GTATCC 1 cut(s) 1223
BcnI CCSGG 1 cut(s) 865
BfaI CTAG 5 cut(s) 410, 564, 836, 846, 986
BfmI CTRYAG 1 cut(s) 45
BfuI GTATCC 1 cut(s) 1223
BglII AGATCT 1 cut(s) 598
BisI GCNGC 2 cut(s) 115, 253
BlsI GCNGC 2 cut(s) 116, 254
Bme1390I CCNGG 4 cut(s) 40, 664, 865, 909
BmeT110I CYCGRG 1 cut(s) 710
BmgBI CACGTC 1 cut(s) 376
BmiI GGNNCC 1 cut(s) 147
BmrFI CCNGG 4 cut(s) 40, 664, 865, 909
BmrI ACTGGG 1 cut(s) 1227
BmsI GCATC 2 cut(s) 61, 649
BmtI GCTAGC 1 cut(s) 849
BmuI ACTGGG 1 cut(s) 1227
BpiI GAAGAC 2 cut(s) 278, 686
BpmI CTGGAG 2 cut(s) 685, 761
Bpu10I CCTNAGC 1 cut(s) 1029
BpuEI CTTGAG 3 cut(s) 203, 446, 465
BpuMI CCSGG 1 cut(s) 865
BsaAI YACGTR 1 cut(s) 1086
BsaJI CCNNGG 2 cut(s) 38, 1203
Bsc4I CCNNNNNNNGG 4 cut(s) 142, 158, 544, 1209
Bse1I ACTGG 4 cut(s) 1083, 1138, 1214, 1222
Bse3DI GCAATG 1 cut(s) 804
BseBI CCWGG 3 cut(s) 40, 664, 909
BseDI CCNNGG 2 cut(s) 38, 1203
BseGI GGATG 2 cut(s) 52, 64
BseLI CCNNNNNNNGG 4 cut(s) 142, 158, 544, 1209
BseMI GCAATG 1 cut(s) 804
BseMII CTCAG 3 cut(s) 135, 546, 1020
BseNI ACTGG 4 cut(s) 1083, 1138, 1214, 1222
BseRI GAGGAG 2 cut(s) 109, 1046
BseXI GCAGC 1 cut(s) 126
BseYI CCCAGC 1 cut(s) 752
Bsh1285I CGRYCG 1 cut(s) 996
BshNI GGYRCC 1 cut(s) 145
BsiEI CGRYCG 1 cut(s) 996
BsiHKAI GWGCWC 1 cut(s) 1185
BsiHKCI CYCGRG 1 cut(s) 710
BsiSI CCGG 1 cut(s) 864
BslFI GGGAC 1 cut(s) 1239
BslI CCNNNNNNNGG 4 cut(s) 142, 158, 544, 1209
BsmFI GGGAC 1 cut(s) 1239
BsmI GAATGC 1 cut(s) 826
BsoBI CYCGRG 1 cut(s) 710
Bsp1286I GDGCHC 1 cut(s) 1185
Bsp143I GATC 7 cut(s) 188, 420, 495, 598, 706, 993, 1011
Bsp19I CCATGG 1 cut(s) 1203
BspACI CCGC 2 cut(s) 252, 1109
BspCNI CTCAG 3 cut(s) 134, 545, 1021
BspLI GGNNCC 1 cut(s) 147
BspOI GCTAGC 1 cut(s) 849
BspPI GGATC 3 cut(s) 415, 490, 1019
BspQI GCTCTTC 2 cut(s) 66, 445
BspT107I GGYRCC 1 cut(s) 145
BsrDI GCAATG 1 cut(s) 804
BsrI ACTGG 4 cut(s) 1083, 1138, 1214, 1222
BssECI CCNNGG 2 cut(s) 38, 1203
BssMI GATC 7 cut(s) 188, 420, 495, 598, 706, 993, 1011
BssNAI GTATAC 1 cut(s) 333
BssT1I CCWWGG 1 cut(s) 1203
Bst1107I GTATAC 1 cut(s) 333
Bst2UI CCWGG 3 cut(s) 40, 664, 909
Bst4CI ACNGT 1 cut(s) 346
Bst6I CTCTTC 4 cut(s) 66, 306, 445, 1085
BstAPI GCANNNNNTGC 1 cut(s) 692
BstBAI YACGTR 1 cut(s) 1086
BstC8I GCNNGC 1 cut(s) 847
BstDEI CTNAG 3 cut(s) 121, 532, 1029
BstDSI CCRYGG 1 cut(s) 1203
BstF5I GGATG 2 cut(s) 52, 64
BstHHI GCGC 1 cut(s) 52
BstKTI GATC 7 cut(s) 191, 423, 498, 601, 709, 996, 1014
BstMBI GATC 7 cut(s) 188, 420, 495, 598, 706, 993, 1011
BstMCI CGRYCG 1 cut(s) 996
BstMWI GCNNNNNNNGC 3 cut(s) 56, 261, 692
BstNI CCWGG 3 cut(s) 40, 664, 909
BstNSI RCATGY 3 cut(s) 722, 882, 952
BstSCI CCNGG 4 cut(s) 38, 662, 863, 907
BstSFI CTRYAG 1 cut(s) 45
BstV1I GCAGC 1 cut(s) 126
BstV2I GAAGAC 2 cut(s) 278, 686
BstX2I RGATCY 4 cut(s) 420, 495, 598, 1011
BstXI CCANNNNNNTGG 1 cut(s) 1057
BstYI RGATCY 4 cut(s) 420, 495, 598, 1011
BstZ17I GTATAC 1 cut(s) 333
BsuI GTATCC 1 cut(s) 1223
BtgI CCRYGG 1 cut(s) 1203
BtrI CACGTC 1 cut(s) 376
BtsCI GGATG 2 cut(s) 52, 64
Cac8I GCNNGC 1 cut(s) 847
CfoI GCGC 1 cut(s) 52
CsiI ACCWGGT 1 cut(s) 907
Csp6I GTAC 1 cut(s) 146
CviAII CATG 7 cut(s) 104, 256, 613, 719, 879, 949, 1204
CviQI GTAC 1 cut(s) 146
DdeI CTNAG 3 cut(s) 121, 532, 1029
DpnI GATC 7 cut(s) 190, 422, 497, 600, 708, 995, 1013
DpnII GATC 7 cut(s) 188, 420, 495, 598, 706, 993, 1011
DraIII CACNNNGTG 2 cut(s) 911, 1191
Eam1104I CTCTTC 4 cut(s) 66, 306, 445, 1085
EarI CTCTTC 4 cut(s) 66, 306, 445, 1085
Eco130I CCWWGG 1 cut(s) 1203
Eco72I CACGTG 1 cut(s) 1086
Eco88I CYCGRG 1 cut(s) 710
EcoRI GAATTC 1 cut(s) 77
EcoRII CCWGG 3 cut(s) 38, 662, 907
EcoT14I CCWWGG 1 cut(s) 1203
EcoT22I ATGCAT 1 cut(s) 950
ErhI CCWWGG 1 cut(s) 1203
FaeI CATG 7 cut(s) 107, 259, 616, 722, 882, 952, 1207
FalI AAGNNNNNCTT 2 cut(s) 381, 413
FaqI GGGAC 1 cut(s) 1239
FatI CATG 7 cut(s) 103, 255, 612, 718, 878, 948, 1203
FauNDI CATATG 2 cut(s) 154, 248
FblI GTMKAC 1 cut(s) 332
Fnu4HI GCNGC 2 cut(s) 115, 253
FokI GGATG 2 cut(s) 39, 51
Fsp4HI GCNGC 2 cut(s) 115, 253
FspBI CTAG 5 cut(s) 410, 564, 836, 846, 986
GlaI GCGC 1 cut(s) 51
GluI GCNGC 2 cut(s) 115, 253
GsaI CCCAGC 1 cut(s) 756
GsuI CTGGAG 2 cut(s) 685, 761
HapII CCGG 1 cut(s) 864
HhaI GCGC 1 cut(s) 52
Hin1II CATG 7 cut(s) 107, 259, 616, 722, 882, 952, 1207
Hin6I GCGC 1 cut(s) 50
HinP1I GCGC 1 cut(s) 50
HpaII CCGG 1 cut(s) 864
HphI GGTGA 2 cut(s) 404, 809
Hpy166II GTNNAC 4 cut(s) 333, 395, 572, 1060
Hpy188I TCNGA 5 cut(s) 124, 240, 384, 535, 706
Hpy188III TCNNGA 8 cut(s) 68, 183, 359, 371, 710, 740, 1067, 1163
Hpy8I GTNNAC 4 cut(s) 333, 395, 572, 1060
HpyAV CCTTC 3 cut(s) 101, 152, 301
HpyCH4III ACNGT 1 cut(s) 346
HpyCH4IV ACGT 4 cut(s) 375, 859, 1073, 1085
HpyCH4V TGCA 9 cut(s) 103, 401, 718, 767, 809, 824, 948, 955, 1237
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 261, 692
HpyF3I CTNAG 3 cut(s) 121, 532, 1029
HpySE526I ACGT 4 cut(s) 375, 859, 1073, 1085
Hsp92II CATG 7 cut(s) 107, 259, 616, 722, 882, 952, 1207
HspAI GCGC 1 cut(s) 50
KpnI GGTACC 1 cut(s) 149
Kzo9I GATC 7 cut(s) 188, 420, 495, 598, 706, 993, 1011
LguI GCTCTTC 2 cut(s) 66, 445
LmnI GCTCC 2 cut(s) 122, 373
Lsp1109I GCAGC 1 cut(s) 126
LweI GCATC 2 cut(s) 61, 649
MabI ACCWGGT 1 cut(s) 907
MaeI CTAG 5 cut(s) 410, 564, 836, 846, 986
MaeII ACGT 4 cut(s) 375, 859, 1073, 1085
MaeIII GTNAC 3 cut(s) 580, 1074, 1241
MalI GATC 7 cut(s) 190, 422, 497, 600, 708, 995, 1013
MboI GATC 7 cut(s) 188, 420, 495, 598, 706, 993, 1011
MfeI CAATTG 4 cut(s) 636, 762, 1006, 1019
MflI RGATCY 4 cut(s) 420, 495, 598, 1011
MhlI GDGCHC 1 cut(s) 1185
MlyI GAGTC 1 cut(s) 676
MmeI TCCRAC 1 cut(s) 106
Mph1103I ATGCAT 1 cut(s) 950
MroXI GAANNNNTTC 3 cut(s) 230, 735, 1094
MseI TTAA 4 cut(s) 171, 348, 675, 935
MslI CAYNNNNRTG 2 cut(s) 108, 883
MspI CCGG 1 cut(s) 864
MspR9I CCNGG 4 cut(s) 40, 664, 865, 909
MunI CAATTG 4 cut(s) 636, 762, 1006, 1019
Mva1269I GAATGC 1 cut(s) 826
MvaI CCWGG 3 cut(s) 40, 664, 909
MwoI GCNNNNNNNGC 3 cut(s) 56, 261, 692
NciI CCSGG 1 cut(s) 865
NcoI CCATGG 1 cut(s) 1203
NdeI CATATG 2 cut(s) 154, 248
NdeII GATC 7 cut(s) 188, 420, 495, 598, 706, 993, 1011
NheI GCTAGC 1 cut(s) 845
NlaIII CATG 7 cut(s) 107, 259, 616, 722, 882, 952, 1207
NlaIV GGNNCC 1 cut(s) 147
NmuCI GTSAC 1 cut(s) 580
NsiI ATGCAT 1 cut(s) 950
NspI RCATGY 3 cut(s) 722, 882, 952
PaeR7I CTCGAG 1 cut(s) 710
PciI ACATGT 1 cut(s) 878
PciSI GCTCTTC 2 cut(s) 66, 445
PctI GAATGC 1 cut(s) 826
PdmI GAANNNNTTC 3 cut(s) 230, 735, 1094
PfeI GAWTC 9 cut(s) 179, 226, 353, 379, 385, 556, 701, 1046, 1095
PflMI CCANNNNNTGG 1 cut(s) 1209
PfoI TCCNGGA 1 cut(s) 863
PkrI GCNGC 2 cut(s) 116, 254
Ple19I CGATCG 1 cut(s) 996
PleI GAGTC 1 cut(s) 675
PmaCI CACGTG 1 cut(s) 1086
PmlI CACGTG 1 cut(s) 1086
PpsI GAGTC 1 cut(s) 675
Ppu21I YACGTR 1 cut(s) 1086
PscI ACATGT 1 cut(s) 878
PshBI ATTAAT 1 cut(s) 171
Psp1406I AACGTT 2 cut(s) 859, 1073
Psp6I CCWGG 3 cut(s) 38, 662, 907
PspCI CACGTG 1 cut(s) 1086
PspFI CCCAGC 1 cut(s) 752
PspGI CCWGG 3 cut(s) 38, 662, 907
PspN4I GGNNCC 1 cut(s) 147
PsuI RGATCY 4 cut(s) 420, 495, 598, 1011
PvuI CGATCG 1 cut(s) 996
RsaI GTAC 1 cut(s) 147
RsaNI GTAC 1 cut(s) 146
RseI CAYNNNNRTG 2 cut(s) 108, 883
SapI GCTCTTC 2 cut(s) 66, 445
SaqAI TTAA 4 cut(s) 171, 348, 675, 935
SatI GCNGC 2 cut(s) 115, 253
Sau3AI GATC 7 cut(s) 188, 420, 495, 598, 706, 993, 1011
SchI GAGTC 1 cut(s) 676
ScrFI CCNGG 4 cut(s) 40, 664, 865, 909
SduI GDGCHC 1 cut(s) 1185
SexAI ACCWGGT 1 cut(s) 907
SfaNI GCATC 2 cut(s) 61, 649
SfcI CTRYAG 1 cut(s) 45
Sfr274I CTCGAG 1 cut(s) 710
SlaI CTCGAG 1 cut(s) 710
SmiMI CAYNNNNRTG 2 cut(s) 108, 883
SmlI CTYRAG 4 cut(s) 218, 425, 480, 710
SmoI CTYRAG 4 cut(s) 218, 425, 480, 710
SsiI CCGC 2 cut(s) 252, 1109
SspI AATATT 1 cut(s) 169
SspMI CTAG 5 cut(s) 410, 564, 836, 846, 986
StyD4I CCNGG 4 cut(s) 38, 662, 863, 907
StyI CCWWGG 1 cut(s) 1203
TaaI ACNGT 1 cut(s) 346
TaiI ACGT 4 cut(s) 378, 862, 1076, 1088
TaqI TCGA 7 cut(s) 324, 448, 699, 711, 963, 992, 996
TauI GCSGC 1 cut(s) 255
TfiI GAWTC 9 cut(s) 179, 226, 353, 379, 385, 556, 701, 1046, 1095
Tru1I TTAA 4 cut(s) 171, 348, 675, 935
Tru9I TTAA 4 cut(s) 171, 348, 675, 935
TseFI GTSAC 1 cut(s) 580
TseI GCWGC 1 cut(s) 114
Tsp45I GTSAC 1 cut(s) 580
TspDTI ATGAA 5 cut(s) 48, 53, 120, 171, 1059
Van91I CCANNNNNTGG 1 cut(s) 1209
VspI ATTAAT 1 cut(s) 171
XapI RAATTY 2 cut(s) 77, 291
XceI RCATGY 3 cut(s) 722, 882, 952
XhoI CTCGAG 1 cut(s) 710
XmiI GTMKAC 1 cut(s) 332
XmnI GAANNNNTTC 3 cut(s) 230, 735, 1094
XspI CTAG 5 cut(s) 410, 564, 836, 846, 986
Zsp2I ATGCAT 1 cut(s) 950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.