Rh4AG149300

ADP binding

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Reverse (-)
37653627 .. 37660929
7303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG149300.1

Sequence Viewer

Length: 4380 bp
ATGGAAAAAATCTGCTTTTCAGTTCTTGGAAAACTCGCAGAGTACACAGTAGCACCAGTTCTGCGACAGTTTAGCTATCTGATTCACTGTGAGAGCAACATCGATAATCTCACCAGCCAGGCTGGGAGGCTGGCCGACAAAAGAGATGGAATACAGCTAGCCATGGATGCGGCGACCAGAAACTTAGAGACTATTGCTCCTGAAGTTGAGTCCTGGCTGCATGATGTTAACAATACCATACAGGACAAGGAGACGTGTTTTGAGGAAGAAACTGTAGCAAAGGCAACATGCTGTAATGGATGGTTTCCAAATTTGAAGTATCGTCATTCCTTGAGTAGGAAAGCTAAGAAGATGACTGTGATTGTTGATAAGCTCCTTGGAGACGGGAGTTTCGCAGTCATATCTCACCCAGGTCCTCCCCCAGAGATATTTCCATTTCCAAACAAAAAACATTCCGAGTCTGTTGATAAGGCTTTGGCCAAGCCCCATGAAGGGGCAAGCTCCTCAGGAACCTCCAACCCTGCTCCTCCATCACTTATGAAACTATCTGAGAATTTGGAATACAGATTACCTTATACAAAGGTCGTGAATGCTTTGCATAATGATGATATCAACATGATTGGCATTTGCGGGACAATCAAAGGAGGAGATACGATGACAGCAAAAGAATTCATCCAGATAGTAAAACACCAAGATATATTTGAGGAGGTTGTGATGGCAGTTGTGTCCCATGATCCAGACTTGAAGCGGATACAAGTCGAAATTGGAGATATGCTAGGGCTGAATTTGGAAAATATGAGTTTGATTGAAGGAGCAGAGATGCTTCATGCTAGAATGTTTAGCGATACAGAGAGGTTCCTTGTTGTATTGGCTGATGTTTGGAAAATACTTGATTTGGAAGCAGTTGGAATCCCTCATGGTGAAAGTAACCAAGGATGCAAGATCATATTTTTGTCAAGACTGCCAAATGTATTTAACAGCAACAAGAAAGGGTGCGTTAGAATGCATGATGTGGTCCGCGATGTTGCCCTGTTCATATTCTCTGAGGGTAAAGAGAGATTTTTGGTAAGATGTGAAGTGGAACTGAAGGATTGGCCTAAGATTAATAGTGTTTCTAAGCAGTACATGTGCAGTACACTGATAAACAATCAAACTCATCAGCATACTGTGCTTTTATTATTGTCAAGCATGGATAAATTGTCTTTGGAACCACCATCCACTATATTTGAAGGAATGGGAGATCTTAAGGTTTTAGGCATGAGGAGCACAGTTGTTTCGCCAATACTGCCATCGCTTCCACTTTTAAGAAACCTTCAAACGTTGTCTCTGGAGCATTGCAATTTTAACAACGATCATGTCAAGATACTCAACAGTGTCCTCGGAAAGCTACGGACACTGATGATACTCAGCTTTCGTGGCTCTTGCATCAAAGAATTACCTGATGAACTTAAAAATTTGTCGAAGCTAAGGTTGCTAGATTTGACAGGATGTATTGGTCTTGAGATGATTTCACCACGTGTCATTTCTAGCTTAACCCAACTAGAGGAATTATACATGTGGAATAGCTTTGACAACTGGGTGGTCCTAAGAGATGAACATGTCTCAGAAACCCAACTAAGAGATGAACATGTCTCAAAAAATACCCAACTGTTCAGGCCAGAGGAGTTGGTGAACATCTTTGAGTCAGCTCGTTTTGAGGAACATAGGAAAGTAAACACTAATGCAGAACTTTCAGAGCTACTTTCCTTGAGCTGTTTGACTAGTTTAGAAGCTGCTCTTCCACCAACTAAAACTATGCAAAGCAGTGTGGCATTTCATAAGCTTGAAAGATTTAAAATCTCTATAGAATCCAGGAAATCCATTTATAATTTCTTCATGGATGAGGAAAGAAGATTGGATGTAAGCCCTTCTGAGAACTACTTGAGACTTCATGATCTTGATGGAAACTCTCTTGTCGGAAGTACAATCTCTATGTTACTGAAGAAAACCAACACACTAGATCTGAAAATGAAAAAGCTCAAGGATGCTCTCAATTTCATAGATGGAGACTGTTTTGTAAACTTGAAGTCTCTAACACTGCAAGATTGTAAGGCTATGGAATATCTCATTGACATGACGGATATAGTTCCACTTCCACGTAATGCAGTGCTTCCGGTCTTAGATACGCTGAATATCCGAAGTGCAGATAGGATGAAGGAGATATGTCATGGTCAGCTTCCAATGGGGTCATTTGAAAAGCTAATCCAGATATCTTTAAGCAATCTGTCTCAATTGACACATGTATGGAAGATAGAAGCTCAGTTTGAATGCCTCGAAAATCTAAGACGTGTCGTTGTGAAATCCTGTTCAGCTTTGAAGTTTGTCTTCCTGTTGTCTACTGGTAATGATCTTAAGCAACTTGAAGAACTAGAGATTGCATCTTGCCCGTCCTTGGAAGAGATATTTACCTTGGAAGGATCAGGACATCAGATCAAGTGCCTGAATTTGATACGATTGAGTCTTGTTGATCTAAGGCTTAAGGCAAGCACAAACGCATGCATGATGAACTTCCCTCAACTAATCACCTTGGAGCTCAGACGCCTACCAGAACTCATCAGTCTCTTTCCGAGTCATTTGGCTTCAAAACACAGCTCTAATGCCACTAATGTTCTATTTGACCCCAAGGTTAAACCTTTTCGTGAGCTACGGTATATGGTGGTGAGCAGCTGTAACAATCTACTTGGTGTTTTCTCATCCAGTGTGGTGCAAAACTTACAGAATCTTGAACAACTTGAAGTATGGTCTTGTGACTCACTGGAAACAGTATTTGAGCTTGAAGGTTTAGAAATAAAAGAAAAGGATGGTGTTACTGCAACACTATTGTCTTGCTTGGAGAAAATGGAGTTGGGTGATCTACCCATGTTGGCATACCTGTGGAAGCCACCTCAAAACATTCTGGCATTTCAAAACTTAACAACGCTTCAAGTTTCGAGTTGCAACAGATTGGAATATGTGTTCCCGCTCTTCATGGTAGGAGGTCTAGTAAAACTAGAATCCATGTACATCACATATTGCCCTCGAATAGCAGAAATTTTTGCAAAAACTGAAGAACATGGCAATGAAGAGAAAACAAATGAAATTGCTATTTCTCAGGTAAAAACTCTCCATCTTTCCGGTTTACATAGACTCAAAAGATTTTGTCTTGTACCATGCACTGTTGACTTCCCATCATTGAAAACACTGGTGCTCACCGACTGCGGTGACCTGAAGACATTTGTTCCACCGGTCGTAGCCACAGGAAGTGACCCGATCTCCCTTTTTGGGGAACAGGTTGATTTTCCAGTTTTGGAGACACTAGAAATTCGCGACGTGGACAACTTCAAGGAGATATTCAGCAAACAAATTTCACACAATTCCTTCTGTGAACTAAGAGATCTAAACGTGTCCAATTGTATGAAATTATTGCATTCGGTGCCAATGTTTATGCAAAACAGGTTGCCGAAACTAGAGAAGTTACATGTCAGTGACTGCAGGTCACTAGAAGGGATTTTTGAATTGAGAGAAATATCTGCTGATGAAGGGGAAGCTGTAACCATTTCACAGTCAGGGGAGACATCTTCAATTTCCCAACCTGAACGAATAATAAACCAGATGGATTCCAGACTAACCCGAGGCTTTCCAAATTTGACATCAATAAATATTTCTCATTGTAACAATTTGAGAAATCTGCTCTCTCTCTCCATTGCCAGAGGTCTGGTGAAGCTCAAAAATCTATCCATAGATCACTGCCAGAAGATGGAAGAAATCATAGCAGCAGATGGCAATGAAACAGAGGACACGGTTGTTTTCCCAATCCTGGAGACACTAGAAATTCGCGACATGGACAACTTCAAGGAGATATTCAGCAAACAAATTTCACACAATTCCTTCTGTGAACTAAGAGATCTAAACGTGTCCAATTGTATGAAATTATTGCATTCGGTGCCAATGTTTATGCAAAACAGGTTGCCGAAACTAGAGAAGTTACATGTCAGTGACTGCAGGTCACTGGAAGGGATTTTTGAATTGAGAGAAATATCTGCTGATGAAGGGGAAGCTGTAACCATTTCACAGTCAGGGGAAACACCTTCTATTTCCCAACCTGAACGAACAATAAACCAGATGGATTACAGACTAACCAAAGGCTTTCCAAATTTGACATCAATAAAGATTTCTGGTTGTAACAATTTGAGATATCTGCTTTCTCTCTCCATTGCCATAGGTCTGGTGAAGCTCAAAAATCTATTCATAGATCACTGCCAGAAGATGGAAGAAATCATAGCAGCAGATGGCAAGGAAACAGAGGACACGGTGAGTATTAGTGTAAGGCTTCGTAAGATGTTTTTATTGACTTTCATCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1459

Amino Acids

164.78

Weight (kDa)

5.69

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 193 - 334 3.6e-13 NB-ARC domain
LRR_14 PF23598 428 - 763 6.8e-08 Leucine-rich repeat region
LRR_RPS2 PF23247 668 - 808 1.2e-17 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 890 - 1018 3.4e-32 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1004 - 1092 6.3e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1110 - 1257 6.2e-25 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1280 - 1427 9.9e-24 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1866
Acc36I ACCTGC 2 cut(s) 3501, 4011
AccB1I GGYRCC 2 cut(s) 3451, 3961
AccB7I CCANNNNNTGG 2 cut(s) 3775, 4285
AccBSI CCGCTC 1 cut(s) 3001
AccI GTMKAC 1 cut(s) 2375
AccII CGCG 3 cut(s) 1020, 3345, 3855
AciI CCGC 6 cut(s) 170, 630, 748, 1018, 2999, 3237
AclI AACGTT 1 cut(s) 1319
AclWI GGATC 2 cut(s) 728, 2464
AcoI YGGCCR 2 cut(s) 132, 477
AcuI CTGAAG 5 cut(s) 222, 1106, 2000, 3105, 3266
AcvI CACGTG 1 cut(s) 1517
AcyI GRCGYC 1 cut(s) 2578
AdeI CACNNNGTG 1 cut(s) 1517
AfaI GTAC 6 cut(s) 44, 1124, 1135, 1963, 3041, 3186
AflII CTTAAG 3 cut(s) 1244, 2390, 2516
AgeI ACCGGT 1 cut(s) 3262
AhdI GACNNNNNGTC 2 cut(s) 3511, 4021
AhlI ACTAGT 1 cut(s) 1760
AjiI CACGTC 3 cut(s) 255, 2327, 3349
AjnI CCWGG 5 cut(s) 117, 212, 409, 1850, 3834
AjuI GAANNNNNNNTTGG 2 cut(s) 2867, 2899
AloI GAACNNNNNNTCC 2 cut(s) 2978, 3010
Alw21I GWGCWC 3 cut(s) 1268, 2574, 3228
AlwI GGATC 2 cut(s) 728, 2464
AlwNI CAGNNNCTG 2 cut(s) 3507, 4017
Ama87I CYCGRG 1 cut(s) 3648
AoxI GGCC 4 cut(s) 132, 477, 1094, 1655
ApeKI GCWGC 5 cut(s) 217, 1772, 2703, 3791, 4301
ArsI GACNNNNNNTTYG 2 cut(s) 374, 406
AseI ATTAAT 1 cut(s) 1104
AsiGI ACCGGT 1 cut(s) 3262
AspS9I GGNCC 3 cut(s) 413, 1015, 1582
AsuNHI GCTAGC 1 cut(s) 157
AvaI CYCGRG 1 cut(s) 3648
AvaII GGWCC 3 cut(s) 413, 1015, 1582
AxyI CCTNAGG 1 cut(s) 505
BalI TGGCCA 1 cut(s) 479
BanI GGYRCC 2 cut(s) 3451, 3961
BanII GRGCYC 1 cut(s) 2574
BbrPI CACGTG 1 cut(s) 1517
BbsI GAAGAC 2 cut(s) 2356, 3254
Bbv12I GWGCWC 3 cut(s) 1268, 2574, 3228
BbvI GCAGC 5 cut(s) 204, 1759, 2715, 3803, 4313
BciT130I CCWGG 5 cut(s) 119, 214, 411, 1852, 3836
BciVI GTATCC 1 cut(s) 744
BcuI ACTAGT 1 cut(s) 1760
BfmI CTRYAG 4 cut(s) 273, 1842, 3508, 4018
BfrI CTTAAG 3 cut(s) 1244, 2390, 2516
BfuAI ACCTGC 2 cut(s) 3501, 4011
BfuI GTATCC 1 cut(s) 744
BglII AGATCT 4 cut(s) 1240, 1999, 3412, 3922
BisI GCNGC 6 cut(s) 171, 218, 1773, 2704, 3792, 4302
BlsI GCNGC 6 cut(s) 172, 219, 1774, 2705, 3793, 4303
Bme1390I CCNGG 5 cut(s) 119, 214, 411, 1852, 3836
Bme18I GGWCC 3 cut(s) 413, 1015, 1582
BmeRI GACNNNNNGTC 2 cut(s) 3511, 4021
BmeT110I CYCGRG 1 cut(s) 3648
BmgBI CACGTC 3 cut(s) 255, 2327, 3349
BmgT120I GGNCC 3 cut(s) 413, 1015, 1582
BmiI GGNNCC 5 cut(s) 511, 857, 1209, 3453, 3963
BmrFI CCNGG 5 cut(s) 119, 214, 411, 1852, 3836
BmrI ACTGGG 1 cut(s) 1585
BmsI GCATC 6 cut(s) 157, 810, 926, 1434, 2014, 2426
BmtI GCTAGC 1 cut(s) 161
BmuI ACTGGG 1 cut(s) 1585
BpiI GAAGAC 2 cut(s) 2356, 3254
BpmI CTGGAG 2 cut(s) 1349, 3857
Bpu10I CCTNAGC 1 cut(s) 1466
BpuEI CTTGAG 5 cut(s) 352, 1520, 1768, 1942, 2003
Bsa29I ATCGAT 1 cut(s) 102
BsaAI YACGTR 2 cut(s) 1517, 2138
BsaHI GRCGYC 1 cut(s) 2578
BsaWI WCCGGW 3 cut(s) 2152, 3152, 3262
BsaXI ACNNNNNCTCC 6 cut(s) 181, 211, 3006, 3036, 3275, 3305
Bse118I RCCGGY 1 cut(s) 3262
Bse1I ACTGG 8 cut(s) 56, 1580, 2383, 2736, 2799, 3225, 3320, 4032
Bse21I CCTNAGG 1 cut(s) 505
Bse3DI GCAATG 5 cut(s) 1333, 3103, 3720, 3808, 4230
BseBI CCWGG 5 cut(s) 119, 214, 411, 1852, 3836
BseCI ATCGAT 1 cut(s) 102
BseMI GCAATG 5 cut(s) 1333, 3103, 3720, 3808, 4230
BseMII CTCAG 9 cut(s) 519, 540, 1035, 1420, 1617, 1902, 2312, 2587, 3143
BseNI ACTGG 8 cut(s) 56, 1580, 2383, 2736, 2799, 3225, 3320, 4032
BseRI GAGGAG 6 cut(s) 493, 516, 660, 719, 1276, 1676
BseXI GCAGC 5 cut(s) 204, 1759, 2715, 3803, 4313
BseYI CCCAGC 1 cut(s) 122
BsgI GTGCAG 2 cut(s) 1150, 2202
Bsh1236I CGCG 3 cut(s) 1020, 3345, 3855
Bsh1285I CGRYCG 1 cut(s) 3267
BshFI GGCC 4 cut(s) 134, 479, 1096, 1657
BshNI GGYRCC 2 cut(s) 3451, 3961
BshTI ACCGGT 1 cut(s) 3262
BshVI ATCGAT 1 cut(s) 102
BsiEI CGRYCG 1 cut(s) 3267
BsiHKAI GWGCWC 3 cut(s) 1268, 2574, 3228
BsiHKCI CYCGRG 1 cut(s) 3648
BsiSI CCGG 3 cut(s) 2153, 3153, 3263
BslFI GGGAC 2 cut(s) 646, 712
BsmBI CGTCTC 2 cut(s) 245, 375
BsmFI GGGAC 2 cut(s) 646, 712
BsmI GAATGC 5 cut(s) 595, 1008, 2312, 3445, 3955
BsnI GGCC 4 cut(s) 134, 479, 1096, 1657
BsoBI CYCGRG 1 cut(s) 3648
Bsp1286I GDGCHC 3 cut(s) 1268, 2574, 3228
Bsp1407I TGTACA 1 cut(s) 3039
Bsp19I CCATGG 1 cut(s) 162
Bsp68I TCGCGA 2 cut(s) 3345, 3855
BspACI CCGC 6 cut(s) 170, 630, 748, 1018, 2999, 3237
BspANI GGCC 4 cut(s) 134, 479, 1096, 1657
BspCNI CTCAG 9 cut(s) 518, 541, 1036, 1419, 1616, 1903, 2311, 2586, 3142
BspDI ATCGAT 1 cut(s) 102
BspFNI CGCG 3 cut(s) 1020, 3345, 3855
BspHI TCATGA 1 cut(s) 1930
BspLI GGNNCC 5 cut(s) 511, 857, 1209, 3453, 3963
BspMAI CTGCAG 2 cut(s) 3512, 4022
BspMI ACCTGC 2 cut(s) 3501, 4011
BspOI GCTAGC 1 cut(s) 161
BspPI GGATC 2 cut(s) 728, 2464
BspQI GCTCTTC 2 cut(s) 1782, 3008
BspT107I GGYRCC 2 cut(s) 3451, 3961
BspTI CTTAAG 3 cut(s) 1244, 2390, 2516
BsrBI CCGCTC 1 cut(s) 3001
BsrDI GCAATG 5 cut(s) 1333, 3103, 3720, 3808, 4230
BsrFI RCCGGY 1 cut(s) 3262
BsrGI TGTACA 1 cut(s) 3039
BsrI ACTGG 8 cut(s) 56, 1580, 2383, 2736, 2799, 3225, 3320, 4032
BssAI RCCGGY 1 cut(s) 3262
BssNI GRCGYC 1 cut(s) 2578
BssT1I CCWWGG 7 cut(s) 162, 376, 931, 2430, 2448, 2565, 2661
Bst2UI CCWGG 5 cut(s) 119, 214, 411, 1852, 3836
Bst6I CTCTTC 4 cut(s) 1782, 2430, 3008, 3096
BstACI GRCGYC 1 cut(s) 2578
BstAFI CTTAAG 3 cut(s) 1244, 2390, 2516
BstAPI GCANNNNNTGC 3 cut(s) 1168, 3451, 3961
BstAUI TGTACA 1 cut(s) 3039
BstBAI YACGTR 2 cut(s) 1517, 2138
BstC8I GCNNGC 5 cut(s) 132, 159, 499, 2524, 2536
BstDSI CCRYGG 1 cut(s) 162
BstEII GGTNACC 1 cut(s) 3239
BstENI CCTNNNNNAGG 1 cut(s) 334
BstFNI CGCG 3 cut(s) 1020, 3345, 3855
BstMCI CGRYCG 1 cut(s) 3267
BstMWI GCNNNNNNNGC 8 cut(s) 167, 1168, 1263, 1285, 1416, 1471, 3451, 3961
BstNI CCWGG 5 cut(s) 119, 214, 411, 1852, 3836
BstNSI RCATGY 9 cut(s) 291, 1129, 1558, 1601, 1631, 2282, 2538, 3500, 4010
BstPI GGTNACC 1 cut(s) 3239
BstSCI CCNGG 5 cut(s) 117, 212, 409, 1850, 3834
BstSFI CTRYAG 4 cut(s) 273, 1842, 3508, 4018
BstUI CGCG 3 cut(s) 1020, 3345, 3855
BstV1I GCAGC 5 cut(s) 204, 1759, 2715, 3803, 4313
BstV2I GAAGAC 2 cut(s) 2356, 3254
BstX2I RGATCY 4 cut(s) 1240, 1999, 3412, 3922
BstXI CCANNNNNNTGG 2 cut(s) 3733, 4243
BstYI RGATCY 4 cut(s) 1240, 1999, 3412, 3922
Bsu15I ATCGAT 1 cut(s) 102
Bsu36I CCTNAGG 1 cut(s) 505
BsuI GTATCC 1 cut(s) 744
BsuRI GGCC 4 cut(s) 134, 479, 1096, 1657
BsuTUI ATCGAT 1 cut(s) 102
BtgI CCRYGG 1 cut(s) 162
BtgZI GCGATG 2 cut(s) 1035, 1275
BtrI CACGTC 3 cut(s) 255, 2327, 3349
BtsI GCAGTG 5 cut(s) 1810, 2075, 2151, 3763, 4273
BtuMI TCGCGA 2 cut(s) 3345, 3855
BveI ACCTGC 2 cut(s) 3501, 4011
Cac8I GCNNGC 5 cut(s) 132, 159, 499, 2524, 2536
CaiI CAGNNNCTG 2 cut(s) 3507, 4017
CciI TCATGA 1 cut(s) 1930
Cfr10I RCCGGY 1 cut(s) 3262
Cfr13I GGNCC 3 cut(s) 413, 1015, 1582
ClaI ATCGAT 1 cut(s) 102
CseI GACGC 1 cut(s) 2586
Csp6I GTAC 6 cut(s) 43, 1123, 1134, 1962, 3040, 3185
CspAI ACCGGT 1 cut(s) 3262
CspCI CAANNNNNGTGG 2 cut(s) 1207, 1242
CviQI GTAC 6 cut(s) 43, 1123, 1134, 1962, 3040, 3185
DraI TTTAAA 1 cut(s) 1834
DraIII CACNNNGTG 1 cut(s) 1517
DriI GACNNNNNGTC 2 cut(s) 3511, 4021
EaeI YGGCCR 2 cut(s) 132, 477
Eam1104I CTCTTC 4 cut(s) 1782, 2430, 3008, 3096
Eam1105I GACNNNNNGTC 2 cut(s) 3511, 4021
EarI CTCTTC 4 cut(s) 1782, 2430, 3008, 3096
Ecl136II GAGCTC 1 cut(s) 2572
Eco130I CCWWGG 7 cut(s) 162, 376, 931, 2430, 2448, 2565, 2661
Eco24I GRGCYC 1 cut(s) 2574
Eco32I GATATC 3 cut(s) 610, 2250, 4214
Eco47I GGWCC 3 cut(s) 413, 1015, 1582
Eco53kI GAGCTC 1 cut(s) 2572
Eco57I CTGAAG 5 cut(s) 222, 1106, 2000, 3105, 3266
Eco72I CACGTG 1 cut(s) 1517
Eco81I CCTNAGG 1 cut(s) 505
Eco88I CYCGRG 1 cut(s) 3648
Eco91I GGTNACC 1 cut(s) 3239
EcoICRI GAGCTC 1 cut(s) 2572
EcoNI CCTNNNNNAGG 1 cut(s) 334
EcoO109I RGGNCCY 1 cut(s) 413
EcoO65I GGTNACC 1 cut(s) 3239
EcoRI GAATTC 1 cut(s) 668
EcoRII CCWGG 5 cut(s) 117, 212, 409, 1850, 3834
EcoRV GATATC 3 cut(s) 610, 2250, 4214
EcoT14I CCWWGG 7 cut(s) 162, 376, 931, 2430, 2448, 2565, 2661
EcoT22I ATGCAT 2 cut(s) 1008, 2540
EcoT38I GRGCYC 1 cut(s) 2574
ErhI CCWWGG 7 cut(s) 162, 376, 931, 2430, 2448, 2565, 2661
Esp3I CGTCTC 2 cut(s) 245, 375
FalI AAGNNNNNCTT 4 cut(s) 1761, 1793, 2348, 2380
FaqI GGGAC 2 cut(s) 646, 712
FauI CCCGC 2 cut(s) 623, 3006
FblI GTMKAC 1 cut(s) 2375
Fnu4HI GCNGC 6 cut(s) 171, 218, 1773, 2704, 3792, 4302
FriOI GRGCYC 1 cut(s) 2574
Fsp4HI GCNGC 6 cut(s) 171, 218, 1773, 2704, 3792, 4302
GluI GCNGC 6 cut(s) 171, 218, 1773, 2704, 3792, 4302
GsaI CCCAGC 1 cut(s) 126
GsuI CTGGAG 2 cut(s) 1349, 3857
HaeIII GGCC 4 cut(s) 134, 479, 1096, 1657
HapII CCGG 3 cut(s) 2153, 3153, 3263
HgaI GACGC 1 cut(s) 2586
Hin1I GRCGYC 1 cut(s) 2578
HincII GTYRAC 2 cut(s) 229, 3199
HindII GTYRAC 2 cut(s) 229, 3199
HindIII AAGCTT 1 cut(s) 1820
HpaI GTTAAC 1 cut(s) 229
HpaII CCGG 3 cut(s) 2153, 3153, 3263
Hpy99I CGWCG 1 cut(s) 3350
HpyCH4IV ACGT 8 cut(s) 254, 1319, 1516, 2137, 2326, 3348, 3420, 3930
HpyF10VI GCNNNNNNNGC 8 cut(s) 167, 1168, 1263, 1285, 1416, 1471, 3451, 3961
HpySE526I ACGT 8 cut(s) 254, 1319, 1516, 2137, 2326, 3348, 3420, 3930
Hsp92I GRCGYC 1 cut(s) 2578
KspAI GTTAAC 1 cut(s) 229
LguI GCTCTTC 2 cut(s) 1782, 3008
LmnI GCTCC 8 cut(s) 202, 378, 506, 529, 812, 1263, 1330, 2569
Lsp1109I GCAGC 5 cut(s) 204, 1759, 2715, 3803, 4313
LweI GCATC 6 cut(s) 157, 810, 926, 1434, 2014, 2426
MaeII ACGT 8 cut(s) 254, 1319, 1516, 2137, 2326, 3348, 3420, 3930
MbiI CCGCTC 1 cut(s) 3001
MfeI CAATTG 3 cut(s) 2270, 3427, 3937
MflI RGATCY 4 cut(s) 1240, 1999, 3412, 3922
MhlI GDGCHC 3 cut(s) 1268, 2574, 3228
MlsI TGGCCA 1 cut(s) 479
MluNI TGGCCA 1 cut(s) 479
MlyI GAGTC 7 cut(s) 218, 467, 1691, 2506, 2617, 2783, 3159
MmeI TCCRAC 3 cut(s) 540, 886, 1936
Mox20I TGGCCA 1 cut(s) 479
Mph1103I ATGCAT 2 cut(s) 1008, 2540
MscI TGGCCA 1 cut(s) 479
MslI CAYNNNNRTG 7 cut(s) 603, 2111, 2281, 2911, 3096, 3501, 4011
Msp20I TGGCCA 1 cut(s) 479
MspA1I CMGCKG 1 cut(s) 2706
MspCI CTTAAG 3 cut(s) 1244, 2390, 2516
MspI CCGG 3 cut(s) 2153, 3153, 3263
MspR9I CCNGG 5 cut(s) 119, 214, 411, 1852, 3836
MunI CAATTG 3 cut(s) 2270, 3427, 3937
Mva1269I GAATGC 5 cut(s) 595, 1008, 2312, 3445, 3955
MvaI CCWGG 5 cut(s) 119, 214, 411, 1852, 3836
MvnI CGCG 3 cut(s) 1020, 3345, 3855
MwoI GCNNNNNNNGC 8 cut(s) 167, 1168, 1263, 1285, 1416, 1471, 3451, 3961
NcoI CCATGG 1 cut(s) 162
NheI GCTAGC 1 cut(s) 157
NlaIV GGNNCC 5 cut(s) 511, 857, 1209, 3453, 3963
NmuCI GTSAC 7 cut(s) 2786, 3239, 3281, 3503, 3513, 4013, 4023
NruI TCGCGA 2 cut(s) 3345, 3855
NsiI ATGCAT 2 cut(s) 1008, 2540
NspI RCATGY 9 cut(s) 291, 1129, 1558, 1601, 1631, 2282, 2538, 3500, 4010
PaeI GCATGC 1 cut(s) 2538
PagI TCATGA 1 cut(s) 1930
PciI ACATGT 7 cut(s) 1125, 1554, 1597, 1627, 2278, 3496, 4006
PciSI GCTCTTC 2 cut(s) 1782, 3008
PctI GAATGC 5 cut(s) 595, 1008, 2312, 3445, 3955
PfeI GAWTC 6 cut(s) 82, 909, 1847, 2758, 3032, 3635
PflMI CCANNNNNTGG 2 cut(s) 3775, 4285
PfoI TCCNGGA 2 cut(s) 1850, 3834
PinAI ACCGGT 1 cut(s) 3262
PkrI GCNGC 6 cut(s) 172, 219, 1774, 2705, 3793, 4303
PleI GAGTC 7 cut(s) 217, 466, 1690, 2505, 2616, 2783, 3159
PmaCI CACGTG 1 cut(s) 1517
PmlI CACGTG 1 cut(s) 1517
PpsI GAGTC 7 cut(s) 217, 466, 1690, 2505, 2616, 2783, 3159
Ppu21I YACGTR 2 cut(s) 1517, 2138
PpuMI RGGWCCY 1 cut(s) 413
PscI ACATGT 7 cut(s) 1125, 1554, 1597, 1627, 2278, 3496, 4006
PshBI ATTAAT 1 cut(s) 1104
PsiI TTATAA 1 cut(s) 1866
Psp124BI GAGCTC 1 cut(s) 2574
Psp1406I AACGTT 1 cut(s) 1319
Psp5II RGGWCCY 1 cut(s) 413
Psp6I CCWGG 5 cut(s) 117, 212, 409, 1850, 3834
PspCI CACGTG 1 cut(s) 1517
PspEI GGTNACC 1 cut(s) 3239
PspFI CCCAGC 1 cut(s) 122
PspGI CCWGG 5 cut(s) 117, 212, 409, 1850, 3834
PspN4I GGNNCC 5 cut(s) 511, 857, 1209, 3453, 3963
PspPI GGNCC 3 cut(s) 413, 1015, 1582
PspPPI RGGWCCY 1 cut(s) 413
PsrI GAACNNNNNNTAC 2 cut(s) 42, 74
PstI CTGCAG 2 cut(s) 3512, 4022
PstNI CAGNNNCTG 2 cut(s) 3507, 4017
PsuI RGATCY 4 cut(s) 1240, 1999, 3412, 3922
PvuII CAGCTG 1 cut(s) 2706
RruI TCGCGA 2 cut(s) 3345, 3855
RsaI GTAC 6 cut(s) 44, 1124, 1135, 1963, 3041, 3186
RsaNI GTAC 6 cut(s) 43, 1123, 1134, 1962, 3040, 3185
RseI CAYNNNNRTG 7 cut(s) 603, 2111, 2281, 2911, 3096, 3501, 4011
SacI GAGCTC 1 cut(s) 2574
SapI GCTCTTC 2 cut(s) 1782, 3008
SatI GCNGC 6 cut(s) 171, 218, 1773, 2704, 3792, 4302
Sau96I GGNCC 3 cut(s) 413, 1015, 1582
SchI GAGTC 7 cut(s) 218, 467, 1691, 2506, 2617, 2783, 3159
ScrFI CCNGG 5 cut(s) 119, 214, 411, 1852, 3836
SduI GDGCHC 3 cut(s) 1268, 2574, 3228
SfaNI GCATC 6 cut(s) 157, 810, 926, 1434, 2014, 2426
SfcI CTRYAG 4 cut(s) 273, 1842, 3508, 4018
SinI GGWCC 3 cut(s) 413, 1015, 1582
SmiMI CAYNNNNRTG 7 cut(s) 603, 2111, 2281, 2911, 3096, 3501, 4011
SmlI CTYRAG 8 cut(s) 331, 1244, 1499, 1747, 1921, 2018, 2390, 2516
SmoI CTYRAG 8 cut(s) 331, 1244, 1499, 1747, 1921, 2018, 2390, 2516
SpeI ACTAGT 1 cut(s) 1760
SphI GCATGC 1 cut(s) 2538
SsiI CCGC 6 cut(s) 170, 630, 748, 1018, 2999, 3237
SspI AATATT 1 cut(s) 3679
SstI GAGCTC 1 cut(s) 2574
StyD4I CCNGG 5 cut(s) 117, 212, 409, 1850, 3834
StyI CCWWGG 7 cut(s) 162, 376, 931, 2430, 2448, 2565, 2661
TaiI ACGT 8 cut(s) 257, 1322, 1519, 2140, 2329, 3351, 3423, 3933
TaqI TCGA 6 cut(s) 102, 759, 1460, 2313, 2969, 3058
TatI WGTACW 5 cut(s) 42, 1122, 1133, 1961, 3039
TauI GCSGC 1 cut(s) 173
TfiI GAWTC 6 cut(s) 82, 909, 1847, 2758, 3032, 3635
TseFI GTSAC 7 cut(s) 2786, 3239, 3281, 3503, 3513, 4013, 4023
TseI GCWGC 5 cut(s) 217, 1772, 2703, 3791, 4301
Tsp45I GTSAC 7 cut(s) 2786, 3239, 3281, 3503, 3513, 4013, 4023
TspGWI ACGGA 2 cut(s) 1405, 2132
Van91I CCANNNNNTGG 2 cut(s) 3775, 4285
Vha464I CTTAAG 3 cut(s) 1244, 2390, 2516
VpaK11BI GGWCC 3 cut(s) 413, 1015, 1582
VspI ATTAAT 1 cut(s) 1104
XagI CCTNNNNNAGG 1 cut(s) 334
XceI RCATGY 9 cut(s) 291, 1129, 1558, 1601, 1631, 2282, 2538, 3500, 4010
XmiI GTMKAC 1 cut(s) 2375
Zsp2I ATGCAT 2 cut(s) 1008, 2540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.