Disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 208 - 335 | 2.6e-08 | NB-ARC domain |
| NB-ARC | PF00931 | 359 - 477 | 1e-14 | NB-ARC domain |
| LRR_14 | PF23598 | 729 - 812 | 1.1e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 733 - 788 | 3.8e-07 | Leucine rich repeat |
| LRR_RPS2 | PF23247 | 999 - 1126 | 1.1e-10 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1204 - 1347 | 6.5e-25 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1298 - 1407 | 5e-09 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1358 |
| AarI | CACCTGC | 1 cut(s) | 550 |
| AatII | GACGTC | 1 cut(s) | 2235 |
| Acc36I | ACCTGC | 3 cut(s) | 550, 3222, 3274 |
| Acc65I | GGTACC | 1 cut(s) | 2023 |
| AccB1I | GGYRCC | 1 cut(s) | 2023 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 309, 3361, 4142 |
| AccI | GTMKAC | 5 cut(s) | 1599, 1630, 2463, 2544, 3448 |
| AccII | CGCG | 3 cut(s) | 256, 430, 565 |
| AciI | CCGC | 6 cut(s) | 331, 425, 428, 430, 2957, 3513 |
| AclI | AACGTT | 1 cut(s) | 99 |
| AclWI | GGATC | 7 cut(s) | 561, 603, 743, 756, 2432, 2513, 4137 |
| AcoI | YGGCCR | 2 cut(s) | 483, 4178 |
| AcsI | RAATTY | 7 cut(s) | 927, 1065, 1387, 2260, 2284, 3016, 3931 |
| AcuI | CTGAAG | 4 cut(s) | 344, 1782, 2153, 3215 |
| AcyI | GRCGYC | 1 cut(s) | 2232 |
| AdeI | CACNNNGTG | 1 cut(s) | 2727 |
| AfaI | GTAC | 6 cut(s) | 153, 2002, 2025, 2299, 2360, 3478 |
| AflIII | ACRYGT | 3 cut(s) | 160, 254, 2361 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3398 |
| AhlI | ACTAGT | 1 cut(s) | 4183 |
| AjnI | CCWGG | 3 cut(s) | 744, 1579, 2320 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 511, 543 |
| Alw21I | GWGCWC | 1 cut(s) | 47 |
| Alw26I | GTCTC | 8 cut(s) | 245, 390, 2174, 2700, 3018, 3181, 3521, 3582 |
| Alw44I | GTGCAC | 1 cut(s) | 43 |
| AlwI | GGATC | 7 cut(s) | 561, 603, 743, 756, 2432, 2513, 4137 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1456 |
| Ama87I | CYCGRG | 1 cut(s) | 1427 |
| AoxI | GGCC | 5 cut(s) | 477, 483, 2730, 3604, 4178 |
| ApaLI | GTGCAC | 1 cut(s) | 43 |
| ApeKI | GCWGC | 8 cut(s) | 170, 294, 297, 954, 1310, 1432, 2050, 4061 |
| ApoI | RAATTY | 7 cut(s) | 927, 1065, 1387, 2260, 2284, 3016, 3931 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3053, 3085, 4041, 4073 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1521, 1575, 1692, 4150 |
| Asp718I | GGTACC | 1 cut(s) | 2023 |
| AspA2I | CCTAGG | 1 cut(s) | 3607 |
| AspLEI | GCGC | 1 cut(s) | 565 |
| AspS9I | GGNCC | 7 cut(s) | 220, 328, 478, 1351, 2730, 3710, 3747 |
| AsuC2I | CCSGG | 1 cut(s) | 482 |
| AsuHPI | GGTGA | 8 cut(s) | 103, 785, 1174, 1526, 2310, 3221, 4085, 4298 |
| AvaI | CYCGRG | 1 cut(s) | 1427 |
| AvaII | GGWCC | 5 cut(s) | 220, 328, 1351, 3710, 3747 |
| AvrII | CCTAGG | 1 cut(s) | 3607 |
| BaeGI | GKGCMC | 2 cut(s) | 47, 1507 |
| BalI | TGGCCA | 1 cut(s) | 4180 |
| BamHI | GGATCC | 1 cut(s) | 748 |
| BanI | GGYRCC | 1 cut(s) | 2023 |
| BanII | GRGCYC | 2 cut(s) | 2405, 2486 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2793, 2825 |
| BbsI | GAAGAC | 2 cut(s) | 1578, 2901 |
| Bbv12I | GWGCWC | 1 cut(s) | 47 |
| BbvCI | CCTCAGC | 2 cut(s) | 4104, 4244 |
| BbvI | GCAGC | 8 cut(s) | 182, 281, 309, 941, 1322, 1419, 2037, 4073 |
| BceAI | ACGGC | 4 cut(s) | 621, 1859, 2038, 2151 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4027, 4061 |
| BciT130I | CCWGG | 3 cut(s) | 746, 1581, 2322 |
| BciVI | GTATCC | 1 cut(s) | 2953 |
| BclI | TGATCA | 3 cut(s) | 1245, 2608, 3871 |
| BcnI | CCSGG | 1 cut(s) | 482 |
| BcoDI | GTCTC | 8 cut(s) | 245, 390, 2174, 2700, 3018, 3181, 3521, 3582 |
| BcuI | ACTAGT | 1 cut(s) | 4183 |
| BfmI | CTRYAG | 3 cut(s) | 295, 1440, 1491 |
| BfuAI | ACCTGC | 3 cut(s) | 550, 3222, 3274 |
| BfuI | GTATCC | 1 cut(s) | 2953 |
| BglII | AGATCT | 6 cut(s) | 106, 1195, 2097, 2671, 2868, 3316 |
| BisI | GCNGC | 9 cut(s) | 171, 295, 298, 428, 955, 1311, 1433, 2051, 4062 |
| BlnI | CCTAGG | 1 cut(s) | 3607 |
| BlsI | GCNGC | 9 cut(s) | 172, 296, 299, 429, 956, 1312, 1434, 2052, 4063 |
| BmcAI | AGTACT | 1 cut(s) | 2002 |
| Bme1390I | CCNGG | 4 cut(s) | 482, 746, 1581, 2322 |
| Bme18I | GGWCC | 5 cut(s) | 220, 328, 1351, 3710, 3747 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3398 |
| BmeT110I | CYCGRG | 1 cut(s) | 1427 |
| BmgT120I | GGNCC | 7 cut(s) | 220, 328, 478, 1351, 2730, 3710, 3747 |
| BmiI | GGNNCC | 6 cut(s) | 366, 480, 750, 2025, 3711, 3748 |
| BmrFI | CCNGG | 4 cut(s) | 482, 746, 1581, 2322 |
| BmrI | ACTGGG | 3 cut(s) | 2408, 2755, 3230 |
| BmuI | ACTGGG | 3 cut(s) | 2408, 2755, 3230 |
| BoxI | GACNNNNGTC | 1 cut(s) | 893 |
| BpiI | GAAGAC | 2 cut(s) | 1578, 2901 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2326, 2358 |
| BpmI | CTGGAG | 2 cut(s) | 2066, 2122 |
| Bpu10I | CCTNAGC | 2 cut(s) | 4104, 4244 |
| BpuEI | CTTGAG | 7 cut(s) | 361, 1215, 1955, 2069, 2944, 3020, 3604 |
| BpuMI | CCSGG | 1 cut(s) | 482 |
| Bsa29I | ATCGAT | 1 cut(s) | 3174 |
| BsaAI | YACGTR | 2 cut(s) | 842, 1777 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1250 |
| BsaHI | GRCGYC | 1 cut(s) | 2232 |
| BsaI | GGTCTC | 3 cut(s) | 3018, 3521, 3582 |
| BsaWI | WCCGGW | 1 cut(s) | 3502 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2039, 2069 |
| Bse118I | RCCGGY | 1 cut(s) | 1991 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1250 |
| BseBI | CCWGG | 3 cut(s) | 746, 1581, 2322 |
| BseCI | ATCGAT | 1 cut(s) | 3174 |
| BseJI | GATNNNNATC | 1 cut(s) | 1250 |
| BseMII | CTCAG | 5 cut(s) | 1998, 2264, 3848, 4118, 4258 |
| BseRI | GAGGAG | 1 cut(s) | 499 |
| BseSI | GKGCMC | 2 cut(s) | 47, 1507 |
| BseXI | GCAGC | 8 cut(s) | 182, 281, 309, 941, 1322, 1419, 2037, 4073 |
| BsgI | GTGCAG | 1 cut(s) | 528 |
| Bsh1236I | CGCG | 3 cut(s) | 256, 430, 565 |
| BshFI | GGCC | 5 cut(s) | 479, 485, 2732, 3606, 4180 |
| BshNI | GGYRCC | 1 cut(s) | 2023 |
| BshVI | ATCGAT | 1 cut(s) | 3174 |
| BsiHKAI | GWGCWC | 1 cut(s) | 47 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1427 |
| BsiSI | CCGG | 4 cut(s) | 446, 482, 1992, 3503 |
| BslFI | GGGAC | 7 cut(s) | 661, 727, 1009, 1784, 2767, 3723, 3760 |
| BsmAI | GTCTC | 8 cut(s) | 245, 390, 2174, 2700, 3018, 3181, 3521, 3582 |
| BsmBI | CGTCTC | 2 cut(s) | 245, 2174 |
| BsmFI | GGGAC | 7 cut(s) | 661, 727, 1009, 1784, 2767, 3723, 3760 |
| BsmI | GAATGC | 4 cut(s) | 1521, 1613, 1854, 2252 |
| BsnI | GGCC | 5 cut(s) | 479, 485, 2732, 3606, 4180 |
| Bso31I | GGTCTC | 3 cut(s) | 3018, 3521, 3582 |
| BsoBI | CYCGRG | 1 cut(s) | 1427 |
| Bsp1286I | GDGCHC | 4 cut(s) | 47, 1507, 2405, 2486 |
| Bsp1407I | TGTACA | 2 cut(s) | 2297, 2358 |
| Bsp19I | CCATGG | 2 cut(s) | 729, 4253 |
| BspACI | CCGC | 6 cut(s) | 331, 425, 428, 430, 2957, 3513 |
| BspANI | GGCC | 5 cut(s) | 479, 485, 2732, 3606, 4180 |
| BspCNI | CTCAG | 5 cut(s) | 1999, 2265, 3847, 4117, 4257 |
| BspDI | ATCGAT | 1 cut(s) | 3174 |
| BspFNI | CGCG | 3 cut(s) | 256, 430, 565 |
| BspHI | TCATGA | 2 cut(s) | 687, 2205 |
| BspLI | GGNNCC | 6 cut(s) | 366, 480, 750, 2025, 3711, 3748 |
| BspMAI | CTGCAG | 1 cut(s) | 299 |
| BspMI | ACCTGC | 3 cut(s) | 550, 3222, 3274 |
| BspPI | GGATC | 7 cut(s) | 561, 603, 743, 756, 2432, 2513, 4137 |
| BspT107I | GGYRCC | 1 cut(s) | 2023 |
| BspTNI | GGTCTC | 3 cut(s) | 3018, 3521, 3582 |
| BsrFI | RCCGGY | 1 cut(s) | 1991 |
| BsrGI | TGTACA | 2 cut(s) | 2297, 2358 |
| BssAI | RCCGGY | 1 cut(s) | 1991 |
| BssNAI | GTATAC | 1 cut(s) | 1600 |
| BssNI | GRCGYC | 1 cut(s) | 2232 |
| BssT1I | CCWWGG | 8 cut(s) | 729, 1158, 1255, 2665, 3378, 3564, 3607, 4253 |
| Bst1107I | GTATAC | 1 cut(s) | 1600 |
| Bst2UI | CCWGG | 3 cut(s) | 746, 1581, 2322 |
| Bst6I | CTCTTC | 4 cut(s) | 714, 1683, 1904, 3774 |
| BstACI | GRCGYC | 1 cut(s) | 2232 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3374 |
| BstAUI | TGTACA | 2 cut(s) | 2297, 2358 |
| BstBAI | YACGTR | 2 cut(s) | 842, 1777 |
| BstC8I | GCNNGC | 5 cut(s) | 505, 1564, 1640, 1644, 4097 |
| BstDEI | CTNAG | 9 cut(s) | 867, 1544, 1553, 2007, 2273, 3419, 3834, 4104, 4244 |
| BstDSI | CCRYGG | 3 cut(s) | 428, 729, 4253 |
| BstEII | GGTNACC | 1 cut(s) | 3209 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 343, 3873 |
| BstFNI | CGCG | 3 cut(s) | 256, 430, 565 |
| BstHHI | GCGC | 1 cut(s) | 565 |
| BstMAI | GTCTC | 8 cut(s) | 245, 390, 2174, 2700, 3018, 3181, 3521, 3582 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 3374, 4058, 4105 |
| BstNI | CCWGG | 3 cut(s) | 746, 1581, 2322 |
| BstNSI | RCATGY | 4 cut(s) | 294, 1598, 2365, 4099 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 893 |
| BstPI | GGTNACC | 1 cut(s) | 3209 |
| BstSCI | CCNGG | 4 cut(s) | 480, 744, 1579, 2320 |
| BstSFI | CTRYAG | 3 cut(s) | 295, 1440, 1491 |
| BstSLI | GKGCMC | 2 cut(s) | 47, 1507 |
| BstSNI | TACGTA | 1 cut(s) | 1777 |
| BstUI | CGCG | 3 cut(s) | 256, 430, 565 |
| BstV1I | GCAGC | 8 cut(s) | 182, 281, 309, 941, 1322, 1419, 2037, 4073 |
| BstV2I | GAAGAC | 2 cut(s) | 1578, 2901 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1704, 1897, 2740 |
| BstZ17I | GTATAC | 1 cut(s) | 1600 |
| Bsu15I | ATCGAT | 1 cut(s) | 3174 |
| BsuI | GTATCC | 1 cut(s) | 2953 |
| BsuRI | GGCC | 5 cut(s) | 479, 485, 2732, 3606, 4180 |
| BsuTUI | ATCGAT | 1 cut(s) | 3174 |
| BtgI | CCRYGG | 3 cut(s) | 428, 729, 4253 |
| BtgZI | GCGATG | 1 cut(s) | 3317 |
| BtsI | GCAGTG | 1 cut(s) | 1956 |
| BtsIMutI | CAGTG | 6 cut(s) | 675, 1956, 1982, 3218, 3459, 3773 |
| BveI | ACCTGC | 3 cut(s) | 550, 3222, 3274 |
| Cac8I | GCNNGC | 5 cut(s) | 505, 1564, 1640, 1644, 4097 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1456 |
| CciI | TCATGA | 2 cut(s) | 687, 2205 |
| CfoI | GCGC | 1 cut(s) | 565 |
| Cfr10I | RCCGGY | 1 cut(s) | 1991 |
| Cfr13I | GGNCC | 7 cut(s) | 220, 328, 478, 1351, 2730, 3710, 3747 |
| Cfr42I | CCGCGG | 1 cut(s) | 431 |
| ClaI | ATCGAT | 1 cut(s) | 3174 |
| CseI | GACGC | 4 cut(s) | 262, 554, 1424, 3133 |
| Csp6I | GTAC | 6 cut(s) | 152, 2001, 2024, 2298, 2359, 3477 |
| CviQI | GTAC | 6 cut(s) | 152, 2001, 2024, 2298, 2359, 3477 |
| DdeI | CTNAG | 9 cut(s) | 867, 1544, 1553, 2007, 2273, 3419, 3834, 4104, 4244 |
| DraIII | CACNNNGTG | 1 cut(s) | 2727 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3398 |
| EaeI | YGGCCR | 2 cut(s) | 483, 4178 |
| Eam1104I | CTCTTC | 4 cut(s) | 714, 1683, 1904, 3774 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3398 |
| EarI | CTCTTC | 4 cut(s) | 714, 1683, 1904, 3774 |
| EciI | GGCGGA | 2 cut(s) | 320, 414 |
| Eco105I | TACGTA | 1 cut(s) | 1777 |
| Eco130I | CCWWGG | 8 cut(s) | 729, 1158, 1255, 2665, 3378, 3564, 3607, 4253 |
| Eco147I | AGGCCT | 1 cut(s) | 3606 |
| Eco24I | GRGCYC | 2 cut(s) | 2405, 2486 |
| Eco31I | GGTCTC | 3 cut(s) | 3018, 3521, 3582 |
| Eco32I | GATATC | 1 cut(s) | 943 |
| Eco47I | GGWCC | 5 cut(s) | 220, 328, 1351, 3710, 3747 |
| Eco57I | CTGAAG | 4 cut(s) | 344, 1782, 2153, 3215 |
| Eco88I | CYCGRG | 1 cut(s) | 1427 |
| Eco91I | GGTNACC | 1 cut(s) | 3209 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 343, 3873 |
| EcoO109I | RGGNCCY | 2 cut(s) | 478, 1351 |
| EcoO65I | GGTNACC | 1 cut(s) | 3209 |
| EcoRII | CCWGG | 3 cut(s) | 744, 1579, 2320 |
| EcoRV | GATATC | 1 cut(s) | 943 |
| EcoT14I | CCWWGG | 8 cut(s) | 729, 1158, 1255, 2665, 3378, 3564, 3607, 4253 |
| EcoT22I | ATGCAT | 2 cut(s) | 1854, 2254 |
| EcoT38I | GRGCYC | 2 cut(s) | 2405, 2486 |
| ErhI | CCWWGG | 8 cut(s) | 729, 1158, 1255, 2665, 3378, 3564, 3607, 4253 |
| Esp3I | CGTCTC | 2 cut(s) | 245, 2174 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 584, 616, 1546, 1578, 3557, 3589 |
| FaqI | GGGAC | 7 cut(s) | 661, 727, 1009, 1784, 2767, 3723, 3760 |
| FauNDI | CATATG | 2 cut(s) | 2468, 2549 |
| FbaI | TGATCA | 3 cut(s) | 1245, 2608, 3871 |
| FblI | GTMKAC | 5 cut(s) | 1599, 1630, 2463, 2544, 3448 |
| Fnu4HI | GCNGC | 9 cut(s) | 171, 295, 298, 428, 955, 1311, 1433, 2051, 4062 |
| FriOI | GRGCYC | 2 cut(s) | 2405, 2486 |
| Fsp4HI | GCNGC | 9 cut(s) | 171, 295, 298, 428, 955, 1311, 1433, 2051, 4062 |
| GlaI | GCGC | 1 cut(s) | 564 |
| GluI | GCNGC | 9 cut(s) | 171, 295, 298, 428, 955, 1311, 1433, 2051, 4062 |
| GsuI | CTGGAG | 2 cut(s) | 2066, 2122 |
| HaeIII | GGCC | 5 cut(s) | 479, 485, 2732, 3606, 4180 |
| HapII | CCGG | 4 cut(s) | 446, 482, 1992, 3503 |
| HgaI | GACGC | 4 cut(s) | 262, 554, 1424, 3133 |
| HhaI | GCGC | 1 cut(s) | 565 |
| Hin1I | GRCGYC | 1 cut(s) | 2232 |
| Hin6I | GCGC | 1 cut(s) | 563 |
| HinP1I | GCGC | 1 cut(s) | 563 |
| HincII | GTYRAC | 4 cut(s) | 1792, 2464, 2545, 3273 |
| HindII | GTYRAC | 4 cut(s) | 1792, 2464, 2545, 3273 |
| HindIII | AAGCTT | 6 cut(s) | 1919, 2303, 2852, 2996, 3454, 4147 |
| HpaII | CCGG | 4 cut(s) | 446, 482, 1992, 3503 |
| HphI | GGTGA | 8 cut(s) | 103, 785, 1174, 1526, 2310, 3221, 4085, 4298 |
| Hpy99I | CGWCG | 2 cut(s) | 2717, 3542 |
| HpyCH4IV | ACGT | 7 cut(s) | 99, 160, 841, 987, 1575, 1776, 2232 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 3374, 4058, 4105 |
| HpyF3I | CTNAG | 9 cut(s) | 867, 1544, 1553, 2007, 2273, 3419, 3834, 4104, 4244 |
| HpySE526I | ACGT | 7 cut(s) | 99, 160, 841, 987, 1575, 1776, 2232 |
| Hsp92I | GRCGYC | 1 cut(s) | 2232 |
| HspAI | GCGC | 1 cut(s) | 563 |
| KpnI | GGTACC | 1 cut(s) | 2027 |
| Ksp22I | TGATCA | 3 cut(s) | 1245, 2608, 3871 |
| KspI | CCGCGG | 1 cut(s) | 431 |
| LmnI | GCTCC | 7 cut(s) | 305, 370, 427, 512, 2047, 3179, 4104 |
| Lsp1109I | GCAGC | 8 cut(s) | 182, 281, 309, 941, 1322, 1419, 2037, 4073 |
| MaeII | ACGT | 7 cut(s) | 99, 160, 841, 987, 1575, 1776, 2232 |
| MfeI | CAATTG | 5 cut(s) | 921, 1698, 2419, 2817, 3349 |
| MhlI | GDGCHC | 4 cut(s) | 47, 1507, 2405, 2486 |
| MlsI | TGGCCA | 1 cut(s) | 4180 |
| MluI | ACGCGT | 1 cut(s) | 254 |
| MluNI | TGGCCA | 1 cut(s) | 4180 |
| MlyI | GAGTC | 4 cut(s) | 991, 1593, 3077, 3554 |
| MmeI | TCCRAC | 5 cut(s) | 198, 1137, 1477, 2734, 3775 |
| Mox20I | TGGCCA | 1 cut(s) | 4180 |
| Mph1103I | ATGCAT | 2 cut(s) | 1854, 2254 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1521, 1575, 1692, 4150 |
| MscI | TGGCCA | 1 cut(s) | 4180 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2156, 3464, 4217 |
| Msp20I | TGGCCA | 1 cut(s) | 4180 |
| MspA1I | CMGCKG | 2 cut(s) | 430, 3513 |
| MspI | CCGG | 4 cut(s) | 446, 482, 1992, 3503 |
| MspR9I | CCNGG | 4 cut(s) | 482, 746, 1581, 2322 |
| MunI | CAATTG | 5 cut(s) | 921, 1698, 2419, 2817, 3349 |
| Mva1269I | GAATGC | 4 cut(s) | 1521, 1613, 1854, 2252 |
| MvaI | CCWGG | 3 cut(s) | 746, 1581, 2322 |
| MvnI | CGCG | 3 cut(s) | 256, 430, 565 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 3374, 4058, 4105 |
| NciI | CCSGG | 1 cut(s) | 482 |
| NcoI | CCATGG | 2 cut(s) | 729, 4253 |
| NdeI | CATATG | 2 cut(s) | 2468, 2549 |
| NlaIV | GGNNCC | 6 cut(s) | 366, 480, 750, 2025, 3711, 3748 |
| NmuCI | GTSAC | 6 cut(s) | 670, 2199, 3069, 3209, 3689, 4006 |
| NsiI | ATGCAT | 2 cut(s) | 1854, 2254 |
| NspI | RCATGY | 4 cut(s) | 294, 1598, 2365, 4099 |
| PaeI | GCATGC | 1 cut(s) | 4099 |
| PaeR7I | CTCGAG | 1 cut(s) | 1427 |
| PagI | TCATGA | 2 cut(s) | 687, 2205 |
| PaqCI | CACCTGC | 1 cut(s) | 550 |
| PceI | AGGCCT | 1 cut(s) | 3606 |
| PciI | ACATGT | 1 cut(s) | 2361 |
| PctI | GAATGC | 4 cut(s) | 1521, 1613, 1854, 2252 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1521, 1575, 1692, 4150 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 309, 3361, 4142 |
| PfoI | TCCNGGA | 1 cut(s) | 1579 |
| PkrI | GCNGC | 9 cut(s) | 172, 296, 299, 429, 956, 1312, 1434, 2052, 4063 |
| PleI | GAGTC | 4 cut(s) | 991, 1592, 3076, 3554 |
| PpsI | GAGTC | 4 cut(s) | 991, 1592, 3076, 3554 |
| Ppu21I | YACGTR | 2 cut(s) | 842, 1777 |
| PpuMI | RGGWCCY | 1 cut(s) | 1351 |
| PscI | ACATGT | 1 cut(s) | 2361 |
| PshAI | GACNNNNGTC | 1 cut(s) | 893 |
| PsiI | TTATAA | 1 cut(s) | 1358 |
| Psp1406I | AACGTT | 1 cut(s) | 99 |
| Psp5II | RGGWCCY | 1 cut(s) | 1351 |
| Psp6I | CCWGG | 3 cut(s) | 744, 1579, 2320 |
| PspEI | GGTNACC | 1 cut(s) | 3209 |
| PspGI | CCWGG | 3 cut(s) | 744, 1579, 2320 |
| PspN4I | GGNNCC | 6 cut(s) | 366, 480, 750, 2025, 3711, 3748 |
| PspPI | GGNCC | 7 cut(s) | 220, 328, 478, 1351, 2730, 3710, 3747 |
| PspPPI | RGGWCCY | 1 cut(s) | 1351 |
| PstI | CTGCAG | 1 cut(s) | 299 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1456 |
| RsaI | GTAC | 6 cut(s) | 153, 2002, 2025, 2299, 2360, 3478 |
| RsaNI | GTAC | 6 cut(s) | 152, 2001, 2024, 2298, 2359, 3477 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2156, 3464, 4217 |
| SacII | CCGCGG | 1 cut(s) | 431 |
| SalI | GTCGAC | 2 cut(s) | 2462, 2543 |
| SatI | GCNGC | 9 cut(s) | 171, 295, 298, 428, 955, 1311, 1433, 2051, 4062 |
| Sau96I | GGNCC | 7 cut(s) | 220, 328, 478, 1351, 2730, 3710, 3747 |
| ScaI | AGTACT | 1 cut(s) | 2002 |
| SchI | GAGTC | 4 cut(s) | 991, 1593, 3077, 3554 |
| ScrFI | CCNGG | 4 cut(s) | 482, 746, 1581, 2322 |
| SduI | GDGCHC | 4 cut(s) | 47, 1507, 2405, 2486 |
| SfcI | CTRYAG | 3 cut(s) | 295, 1440, 1491 |
| Sfr274I | CTCGAG | 1 cut(s) | 1427 |
| Sfr303I | CCGCGG | 1 cut(s) | 431 |
| SgrBI | CCGCGG | 1 cut(s) | 431 |
| SinI | GGWCC | 5 cut(s) | 220, 328, 1351, 3710, 3747 |
| SlaI | CTCGAG | 1 cut(s) | 1427 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2156, 3464, 4217 |
| SmlI | CTYRAG | 9 cut(s) | 340, 1230, 1427, 1970, 2084, 2923, 2999, 3583, 4295 |
| SmoI | CTYRAG | 9 cut(s) | 340, 1230, 1427, 1970, 2084, 2923, 2999, 3583, 4295 |
| SnaBI | TACGTA | 1 cut(s) | 1777 |
| SpeI | ACTAGT | 1 cut(s) | 4183 |
| SphI | GCATGC | 1 cut(s) | 4099 |
| SseBI | AGGCCT | 1 cut(s) | 3606 |
| SsiI | CCGC | 6 cut(s) | 331, 425, 428, 430, 2957, 3513 |
| SspI | AATATT | 5 cut(s) | 458, 1362, 2176, 3104, 3859 |
| StuI | AGGCCT | 1 cut(s) | 3606 |
| StyD4I | CCNGG | 4 cut(s) | 480, 744, 1579, 2320 |
| StyI | CCWWGG | 8 cut(s) | 729, 1158, 1255, 2665, 3378, 3564, 3607, 4253 |
| TaiI | ACGT | 7 cut(s) | 102, 163, 844, 990, 1578, 1779, 2235 |
| TatI | WGTACW | 4 cut(s) | 2000, 2297, 2358, 3476 |
| TauI | GCSGC | 1 cut(s) | 430 |
| TscAI | CASTG | 6 cut(s) | 675, 1956, 1989, 3225, 3466, 3780 |
| TseFI | GTSAC | 6 cut(s) | 670, 2199, 3069, 3209, 3689, 4006 |
| TseI | GCWGC | 8 cut(s) | 170, 294, 297, 954, 1310, 1432, 2050, 4061 |
| Tsp45I | GTSAC | 6 cut(s) | 670, 2199, 3069, 3209, 3689, 4006 |
| TspGWI | ACGGA | 1 cut(s) | 3271 |
| TspRI | CASTG | 6 cut(s) | 675, 1956, 1989, 3225, 3466, 3780 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 309, 3361, 4142 |
| VneI | GTGCAC | 1 cut(s) | 43 |
| VpaK11BI | GGWCC | 5 cut(s) | 220, 328, 1351, 3710, 3747 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 343, 3873 |
| XapI | RAATTY | 7 cut(s) | 927, 1065, 1387, 2260, 2284, 3016, 3931 |
| XbaI | TCTAGA | 3 cut(s) | 2347, 3302, 4021 |
| XceI | RCATGY | 4 cut(s) | 294, 1598, 2365, 4099 |
| XhoI | CTCGAG | 1 cut(s) | 1427 |
| XmaJI | CCTAGG | 1 cut(s) | 3607 |
| XmiI | GTMKAC | 5 cut(s) | 1599, 1630, 2463, 2544, 3448 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1521, 1575, 1692, 4150 |
| ZraI | GACGTC | 1 cut(s) | 2233 |
| ZrmI | AGTACT | 1 cut(s) | 2002 |
| Zsp2I | ATGCAT | 2 cut(s) | 1854, 2254 |