Disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ATPase_2 | PF01637 | 188 - 301 | 2.2e-06 | ATPase domain predominantly from Archaea |
| NB-ARC | PF00931 | 193 - 357 | 2.7e-21 | NB-ARC domain |
| LRR_8 | PF13855 | 640 - 695 | 2.3e-07 | Leucine rich repeat |
| LRR_RPS2 | PF23247 | 870 - 967 | 1e-05 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 848 |
| Acc36I | ACCTGC | 3 cut(s) | 178, 848, 1793 |
| AccB1I | GGYRCC | 2 cut(s) | 491, 860 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2337 |
| AccI | GTMKAC | 3 cut(s) | 228, 713, 2860 |
| AciI | CCGC | 4 cut(s) | 527, 633, 1751, 2231 |
| AclWI | GGATC | 9 cut(s) | 191, 1085, 1409, 1954, 2766, 2830, 2995, 3202, 3215 |
| AcoI | YGGCCR | 1 cut(s) | 1643 |
| AcsI | RAATTY | 7 cut(s) | 431, 519, 1012, 1280, 1981, 2281, 2614 |
| AcuI | CTGAAG | 3 cut(s) | 1449, 1578, 2810 |
| AdeI | CACNNNGTG | 2 cut(s) | 1618, 2045 |
| AfaI | GTAC | 4 cut(s) | 89, 2264, 2560, 3177 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 427, 806, 1560, 2337, 2880, 2962 |
| AflII | CTTAAG | 1 cut(s) | 2828 |
| AflIII | ACRYGT | 1 cut(s) | 3219 |
| AgeI | ACCGGT | 1 cut(s) | 2407 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2892 |
| AjiI | CACGTC | 1 cut(s) | 3202 |
| AjnI | CCWGG | 6 cut(s) | 199, 483, 1046, 1246, 2041, 2754 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1138, 1170, 1180, 1212 |
| Alw21I | GWGCWC | 3 cut(s) | 1533, 1713, 2307 |
| Alw26I | GTCTC | 5 cut(s) | 46, 263, 2159, 2670, 3137 |
| Alw44I | GTGCAC | 1 cut(s) | 1529 |
| AlwI | GGATC | 9 cut(s) | 191, 1085, 1409, 1954, 2766, 2830, 2995, 3202, 3215 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 130 |
| Ama87I | CYCGRG | 1 cut(s) | 2675 |
| AoxI | GGCC | 3 cut(s) | 1044, 1643, 2322 |
| ApaLI | GTGCAC | 1 cut(s) | 1529 |
| ApeKI | GCWGC | 3 cut(s) | 64, 287, 2812 |
| ApoI | RAATTY | 7 cut(s) | 431, 519, 1012, 1280, 1981, 2281, 2614 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2648, 2680 |
| AsiGI | ACCGGT | 1 cut(s) | 2407 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 257, 1242, 2216, 2397 |
| AspLEI | GCGC | 1 cut(s) | 406 |
| AspS9I | GGNCC | 1 cut(s) | 2322 |
| AsuHPI | GGTGA | 5 cut(s) | 103, 175, 1193, 2031, 2819 |
| AsuII | TTCGAA | 1 cut(s) | 185 |
| AvaI | CYCGRG | 1 cut(s) | 2675 |
| BaeGI | GKGCMC | 2 cut(s) | 1174, 1533 |
| BalI | TGGCCA | 1 cut(s) | 1645 |
| BamHI | GGATCC | 1 cut(s) | 3207 |
| BanI | GGYRCC | 2 cut(s) | 491, 860 |
| BanII | GRGCYC | 1 cut(s) | 1713 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2385, 2417 |
| BauI | CACGAG | 1 cut(s) | 936 |
| BbsI | GAAGAC | 3 cut(s) | 659, 788, 1070 |
| Bbv12I | GWGCWC | 3 cut(s) | 1533, 1713, 2307 |
| BbvCI | CCTCAGC | 1 cut(s) | 222 |
| BbvI | GCAGC | 3 cut(s) | 76, 299, 2799 |
| BccI | CCATC | 4 cut(s) | 658, 1028, 1837, 2466 |
| BceAI | ACGGC | 2 cut(s) | 309, 3308 |
| BciT130I | CCWGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| BciVI | GTATCC | 1 cut(s) | 2343 |
| BclI | TGATCA | 1 cut(s) | 940 |
| BcoDI | GTCTC | 5 cut(s) | 46, 263, 2159, 2670, 3137 |
| BfaI | CTAG | 9 cut(s) | 17, 791, 1256, 1445, 2069, 2120, 2252, 2921, 3234 |
| BfmI | CTRYAG | 7 cut(s) | 174, 273, 399, 537, 855, 1678, 2466 |
| BfrI | CTTAAG | 1 cut(s) | 2828 |
| BfuAI | ACCTGC | 3 cut(s) | 178, 848, 1793 |
| BfuI | GTATCC | 1 cut(s) | 2343 |
| BglII | AGATCT | 3 cut(s) | 388, 1780, 2460 |
| BisI | GCNGC | 6 cut(s) | 65, 288, 527, 634, 1751, 2813 |
| BlsI | GCNGC | 6 cut(s) | 66, 289, 528, 635, 1752, 2814 |
| BmcAI | AGTACT | 1 cut(s) | 2560 |
| Bme1390I | CCNGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2892 |
| BmeT110I | CYCGRG | 1 cut(s) | 2675 |
| BmgBI | CACGTC | 1 cut(s) | 3202 |
| BmgT120I | GGNCC | 1 cut(s) | 2322 |
| BmiI | GGNNCC | 4 cut(s) | 493, 862, 1749, 3209 |
| BmrFI | CCNGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| BmrI | ACTGGG | 1 cut(s) | 3084 |
| BmsI | GCATC | 6 cut(s) | 115, 415, 811, 1715, 2530, 3235 |
| BmuI | ACTGGG | 1 cut(s) | 3084 |
| BoxI | GACNNNNGTC | 1 cut(s) | 759 |
| BpiI | GAAGAC | 3 cut(s) | 659, 788, 1070 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2021, 2053 |
| BpmI | CTGGAG | 3 cut(s) | 222, 1069, 2222 |
| Bpu10I | CCTNAGC | 1 cut(s) | 222 |
| Bpu14I | TTCGAA | 1 cut(s) | 185 |
| BpuEI | CTTGAG | 4 cut(s) | 1769, 2048, 2542, 2929 |
| BsaAI | YACGTR | 2 cut(s) | 1943, 2840 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1878 |
| BsaI | GGTCTC | 1 cut(s) | 46 |
| BsaJI | CCNNGG | 4 cut(s) | 2331, 2979, 3195, 3249 |
| BsaWI | WCCGGW | 3 cut(s) | 619, 2407, 3118 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 427, 806, 1560, 2337, 2880, 2962 |
| Bse118I | RCCGGY | 1 cut(s) | 2407 |
| Bse1I | ACTGG | 6 cut(s) | 1838, 2205, 2342, 2376, 2566, 3079 |
| Bse3DI | GCAATG | 1 cut(s) | 2973 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1878 |
| BseBI | CCWGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| BseDI | CCNNGG | 4 cut(s) | 2331, 2979, 3195, 3249 |
| BseGI | GGATG | 3 cut(s) | 406, 2477, 3127 |
| BseJI | GATNNNNATC | 1 cut(s) | 1878 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 427, 806, 1560, 2337, 2880, 2962 |
| BseMI | GCAATG | 1 cut(s) | 2973 |
| BseMII | CTCAG | 8 cut(s) | 213, 406, 444, 479, 516, 1629, 1948, 2154 |
| BseNI | ACTGG | 6 cut(s) | 1838, 2205, 2342, 2376, 2566, 3079 |
| BseRI | GAGGAG | 5 cut(s) | 490, 580, 2285, 2315, 2693 |
| BseSI | GKGCMC | 2 cut(s) | 1174, 1533 |
| BseXI | GCAGC | 3 cut(s) | 76, 299, 2799 |
| BsgI | GTGCAG | 1 cut(s) | 1155 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2889 |
| BshFI | GGCC | 3 cut(s) | 1046, 1645, 2324 |
| BshNI | GGYRCC | 2 cut(s) | 491, 860 |
| BshTI | ACCGGT | 1 cut(s) | 2407 |
| BsiEI | CGRYCG | 1 cut(s) | 2889 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1533, 1713, 2307 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2675 |
| BsiSI | CCGG | 3 cut(s) | 620, 2408, 3119 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 427, 806, 1560, 2337, 2880, 2962 |
| BsmAI | GTCTC | 5 cut(s) | 46, 263, 2159, 2670, 3137 |
| BsmI | GAATGC | 3 cut(s) | 1210, 1521, 2909 |
| BsnI | GGCC | 3 cut(s) | 1046, 1645, 2324 |
| Bso31I | GGTCTC | 1 cut(s) | 46 |
| BsoBI | CYCGRG | 1 cut(s) | 2675 |
| Bsp119I | TTCGAA | 1 cut(s) | 185 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1174, 1533, 1713, 2307 |
| Bsp1407I | TGTACA | 1 cut(s) | 2262 |
| Bsp19I | CCATGG | 2 cut(s) | 2331, 3249 |
| BspACI | CCGC | 4 cut(s) | 527, 633, 1751, 2231 |
| BspANI | GGCC | 3 cut(s) | 1046, 1645, 2324 |
| BspCNI | CTCAG | 8 cut(s) | 214, 405, 445, 478, 515, 1628, 1947, 2155 |
| BspHI | TCATGA | 2 cut(s) | 1926, 2530 |
| BspLI | GGNNCC | 4 cut(s) | 493, 862, 1749, 3209 |
| BspMAI | CTGCAG | 2 cut(s) | 859, 1682 |
| BspMI | ACCTGC | 3 cut(s) | 178, 848, 1793 |
| BspPI | GGATC | 9 cut(s) | 191, 1085, 1409, 1954, 2766, 2830, 2995, 3202, 3215 |
| BspQI | GCTCTTC | 1 cut(s) | 420 |
| BspT104I | TTCGAA | 1 cut(s) | 185 |
| BspT107I | GGYRCC | 2 cut(s) | 491, 860 |
| BspTI | CTTAAG | 1 cut(s) | 2828 |
| BspTNI | GGTCTC | 1 cut(s) | 46 |
| BsrDI | GCAATG | 1 cut(s) | 2973 |
| BsrFI | RCCGGY | 1 cut(s) | 2407 |
| BsrGI | TGTACA | 1 cut(s) | 2262 |
| BsrI | ACTGG | 6 cut(s) | 1838, 2205, 2342, 2376, 2566, 3079 |
| BssAI | RCCGGY | 1 cut(s) | 2407 |
| BssECI | CCNNGG | 4 cut(s) | 2331, 2979, 3195, 3249 |
| BssNAI | GTATAC | 1 cut(s) | 714 |
| BssSI | CACGAG | 1 cut(s) | 936 |
| BssT1I | CCWWGG | 4 cut(s) | 2331, 2979, 3195, 3249 |
| Bst1107I | GTATAC | 1 cut(s) | 714 |
| Bst2BI | CACGAG | 1 cut(s) | 936 |
| Bst2UI | CCWGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| Bst6I | CTCTTC | 5 cut(s) | 261, 420, 2067, 2207, 2961 |
| BstAFI | CTTAAG | 1 cut(s) | 2828 |
| BstAUI | TGTACA | 1 cut(s) | 2262 |
| BstBAI | YACGTR | 2 cut(s) | 1943, 2840 |
| BstBI | TTCGAA | 1 cut(s) | 185 |
| BstC8I | GCNNGC | 9 cut(s) | 219, 292, 471, 496, 1231, 1307, 1311, 2432, 3259 |
| BstDSI | CCRYGG | 2 cut(s) | 2331, 3249 |
| BstEII | GGTNACC | 1 cut(s) | 2422 |
| BstF5I | GGATG | 3 cut(s) | 406, 2477, 3127 |
| BstHHI | GCGC | 1 cut(s) | 406 |
| BstMAI | GTCTC | 5 cut(s) | 46, 263, 2159, 2670, 3137 |
| BstMCI | CGRYCG | 1 cut(s) | 2889 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 179, 284, 410, 1708, 1825, 3254 |
| BstNI | CCWGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| BstNSI | RCATGY | 2 cut(s) | 294, 3223 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 759 |
| BstPI | GGTNACC | 1 cut(s) | 2422 |
| BstSCI | CCNGG | 6 cut(s) | 199, 483, 1046, 1246, 2041, 2754 |
| BstSFI | CTRYAG | 7 cut(s) | 174, 273, 399, 537, 855, 1678, 2466 |
| BstSLI | GKGCMC | 2 cut(s) | 1174, 1533 |
| BstV1I | GCAGC | 3 cut(s) | 76, 299, 2799 |
| BstV2I | GAAGAC | 3 cut(s) | 659, 788, 1070 |
| BstX2I | RGATCY | 7 cut(s) | 388, 1401, 1780, 1946, 2460, 2822, 3207 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2332, 3202 |
| BstYI | RGATCY | 7 cut(s) | 388, 1401, 1780, 1946, 2460, 2822, 3207 |
| BstZ17I | GTATAC | 1 cut(s) | 714 |
| BsuI | GTATCC | 1 cut(s) | 2343 |
| BsuRI | GGCC | 3 cut(s) | 1046, 1645, 2324 |
| BtgI | CCRYGG | 2 cut(s) | 2331, 3249 |
| BtrI | CACGTC | 1 cut(s) | 3202 |
| BtsCI | GGATG | 3 cut(s) | 406, 2477, 3127 |
| BtsI | GCAGTG | 1 cut(s) | 1172 |
| BtsIMutI | CAGTG | 7 cut(s) | 1030, 1172, 1498, 1623, 1685, 3072, 3159 |
| BveI | ACCTGC | 3 cut(s) | 178, 848, 1793 |
| Cac8I | GCNNGC | 9 cut(s) | 219, 292, 471, 496, 1231, 1307, 1311, 2432, 3259 |
| CaiI | CAGNNNCTG | 1 cut(s) | 130 |
| CciI | TCATGA | 2 cut(s) | 1926, 2530 |
| CfoI | GCGC | 1 cut(s) | 406 |
| Cfr10I | RCCGGY | 1 cut(s) | 2407 |
| Cfr13I | GGNCC | 1 cut(s) | 2322 |
| CsiI | ACCWGGT | 1 cut(s) | 2041 |
| Csp6I | GTAC | 4 cut(s) | 88, 2263, 2559, 3176 |
| CspAI | ACCGGT | 1 cut(s) | 2407 |
| CviQI | GTAC | 4 cut(s) | 88, 2263, 2559, 3176 |
| DraI | TTTAAA | 2 cut(s) | 1408, 1978 |
| DraIII | CACNNNGTG | 2 cut(s) | 1618, 2045 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2892 |
| EaeI | YGGCCR | 1 cut(s) | 1643 |
| Eam1104I | CTCTTC | 5 cut(s) | 261, 420, 2067, 2207, 2961 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2892 |
| EarI | CTCTTC | 5 cut(s) | 261, 420, 2067, 2207, 2961 |
| Ecl136II | GAGCTC | 1 cut(s) | 1711 |
| Eco130I | CCWWGG | 4 cut(s) | 2331, 2979, 3195, 3249 |
| Eco147I | AGGCCT | 1 cut(s) | 1046 |
| Eco24I | GRGCYC | 1 cut(s) | 1713 |
| Eco31I | GGTCTC | 1 cut(s) | 46 |
| Eco53kI | GAGCTC | 1 cut(s) | 1711 |
| Eco57I | CTGAAG | 3 cut(s) | 1449, 1578, 2810 |
| Eco88I | CYCGRG | 1 cut(s) | 2675 |
| Eco91I | GGTNACC | 1 cut(s) | 2422 |
| EcoICRI | GAGCTC | 1 cut(s) | 1711 |
| EcoO65I | GGTNACC | 1 cut(s) | 2422 |
| EcoRII | CCWGG | 6 cut(s) | 199, 483, 1046, 1246, 2041, 2754 |
| EcoT14I | CCWWGG | 4 cut(s) | 2331, 2979, 3195, 3249 |
| EcoT22I | ATGCAT | 2 cut(s) | 1521, 1730 |
| EcoT38I | GRGCYC | 1 cut(s) | 1713 |
| ErhI | CCWWGG | 4 cut(s) | 2331, 2979, 3195, 3249 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 723, 755, 762, 794 |
| FauNDI | CATATG | 1 cut(s) | 629 |
| FbaI | TGATCA | 1 cut(s) | 940 |
| FblI | GTMKAC | 3 cut(s) | 228, 713, 2860 |
| Fnu4HI | GCNGC | 6 cut(s) | 65, 288, 527, 634, 1751, 2813 |
| FokI | GGATG | 3 cut(s) | 393, 2484, 3134 |
| FriOI | GRGCYC | 1 cut(s) | 1713 |
| Fsp4HI | GCNGC | 6 cut(s) | 65, 288, 527, 634, 1751, 2813 |
| FspBI | CTAG | 9 cut(s) | 17, 791, 1256, 1445, 2069, 2120, 2252, 2921, 3234 |
| GlaI | GCGC | 1 cut(s) | 405 |
| GluI | GCNGC | 6 cut(s) | 65, 288, 527, 634, 1751, 2813 |
| GsuI | CTGGAG | 3 cut(s) | 222, 1069, 2222 |
| HaeIII | GGCC | 3 cut(s) | 1046, 1645, 2324 |
| HapII | CCGG | 3 cut(s) | 620, 2408, 3119 |
| HhaI | GCGC | 1 cut(s) | 406 |
| Hin6I | GCGC | 1 cut(s) | 404 |
| HinP1I | GCGC | 1 cut(s) | 404 |
| HincII | GTYRAC | 3 cut(s) | 679, 1566, 3048 |
| HindII | GTYRAC | 3 cut(s) | 679, 1566, 3048 |
| HindIII | AAGCTT | 3 cut(s) | 180, 956, 2444 |
| HpaI | GTTAAC | 1 cut(s) | 679 |
| HpaII | CCGG | 3 cut(s) | 620, 2408, 3119 |
| HphI | GGTGA | 5 cut(s) | 103, 175, 1193, 2031, 2819 |
| Hpy99I | CGWCG | 1 cut(s) | 2962 |
| HpyCH4IV | ACGT | 4 cut(s) | 841, 1942, 2839, 3201 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 179, 284, 410, 1708, 1825, 3254 |
| HpySE526I | ACGT | 4 cut(s) | 841, 1942, 2839, 3201 |
| HspAI | GCGC | 1 cut(s) | 404 |
| Ksp22I | TGATCA | 1 cut(s) | 940 |
| KspAI | GTTAAC | 1 cut(s) | 679 |
| LguI | GCTCTTC | 1 cut(s) | 420 |
| LmnI | GCTCC | 6 cut(s) | 503, 1050, 1708, 1747, 2302, 2479 |
| Lsp1109I | GCAGC | 3 cut(s) | 76, 299, 2799 |
| LweI | GCATC | 6 cut(s) | 115, 415, 811, 1715, 2530, 3235 |
| MabI | ACCWGGT | 1 cut(s) | 2041 |
| MaeI | CTAG | 9 cut(s) | 17, 791, 1256, 1445, 2069, 2120, 2252, 2921, 3234 |
| MaeII | ACGT | 4 cut(s) | 841, 1942, 2839, 3201 |
| MaeIII | GTNAC | 2 cut(s) | 964, 2422 |
| MfeI | CAATTG | 3 cut(s) | 1146, 2140, 2153 |
| MflI | RGATCY | 7 cut(s) | 388, 1401, 1780, 1946, 2460, 2822, 3207 |
| MhlI | GDGCHC | 4 cut(s) | 1174, 1533, 1713, 2307 |
| MlsI | TGGCCA | 1 cut(s) | 1645 |
| MluNI | TGGCCA | 1 cut(s) | 1645 |
| MlyI | GAGTC | 4 cut(s) | 1561, 2919, 3043, 3246 |
| MmeI | TCCRAC | 4 cut(s) | 1144, 1467, 2943, 3087 |
| Mox20I | TGGCCA | 1 cut(s) | 1645 |
| Mph1103I | ATGCAT | 2 cut(s) | 1521, 1730 |
| MroXI | GAANNNNTTC | 4 cut(s) | 257, 1242, 2216, 2397 |
| MscI | TGGCCA | 1 cut(s) | 1645 |
| MslI | CAYNNNNRTG | 5 cut(s) | 161, 1266, 2739, 3165, 3218 |
| Msp20I | TGGCCA | 1 cut(s) | 1645 |
| MspCI | CTTAAG | 1 cut(s) | 2828 |
| MspI | CCGG | 3 cut(s) | 620, 2408, 3119 |
| MspR9I | CCNGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| MunI | CAATTG | 3 cut(s) | 1146, 2140, 2153 |
| Mva1269I | GAATGC | 3 cut(s) | 1210, 1521, 2909 |
| MvaI | CCWGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 179, 284, 410, 1708, 1825, 3254 |
| NcoI | CCATGG | 2 cut(s) | 2331, 3249 |
| NdeI | CATATG | 1 cut(s) | 629 |
| NlaIV | GGNNCC | 4 cut(s) | 493, 862, 1749, 3209 |
| NsiI | ATGCAT | 2 cut(s) | 1521, 1730 |
| NspI | RCATGY | 2 cut(s) | 294, 3223 |
| NspV | TTCGAA | 1 cut(s) | 185 |
| PaeI | GCATGC | 1 cut(s) | 294 |
| PaeR7I | CTCGAG | 1 cut(s) | 2675 |
| PagI | TCATGA | 2 cut(s) | 1926, 2530 |
| PaqCI | CACCTGC | 1 cut(s) | 848 |
| PceI | AGGCCT | 1 cut(s) | 1046 |
| PciI | ACATGT | 1 cut(s) | 3219 |
| PciSI | GCTCTTC | 1 cut(s) | 420 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 569 |
| PctI | GAATGC | 3 cut(s) | 1210, 1521, 2909 |
| PdmI | GAANNNNTTC | 4 cut(s) | 257, 1242, 2216, 2397 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2337 |
| PfoI | TCCNGGA | 4 cut(s) | 199, 483, 1246, 2754 |
| PinAI | ACCGGT | 1 cut(s) | 2407 |
| PkrI | GCNGC | 6 cut(s) | 66, 289, 528, 635, 1752, 2814 |
| PleI | GAGTC | 4 cut(s) | 1561, 2919, 3043, 3245 |
| PpsI | GAGTC | 4 cut(s) | 1561, 2919, 3043, 3245 |
| Ppu21I | YACGTR | 2 cut(s) | 1943, 2840 |
| PscI | ACATGT | 1 cut(s) | 3219 |
| PshAI | GACNNNNGTC | 1 cut(s) | 759 |
| Psp124BI | GAGCTC | 1 cut(s) | 1713 |
| Psp6I | CCWGG | 6 cut(s) | 199, 483, 1046, 1246, 2041, 2754 |
| PspEI | GGTNACC | 1 cut(s) | 2422 |
| PspGI | CCWGG | 6 cut(s) | 199, 483, 1046, 1246, 2041, 2754 |
| PspN4I | GGNNCC | 4 cut(s) | 493, 862, 1749, 3209 |
| PspPI | GGNCC | 1 cut(s) | 2322 |
| PspXI | VCTCGAGB | 1 cut(s) | 2675 |
| PstI | CTGCAG | 2 cut(s) | 859, 1682 |
| PstNI | CAGNNNCTG | 1 cut(s) | 130 |
| PsuI | RGATCY | 7 cut(s) | 388, 1401, 1780, 1946, 2460, 2822, 3207 |
| RsaI | GTAC | 4 cut(s) | 89, 2264, 2560, 3177 |
| RsaNI | GTAC | 4 cut(s) | 88, 2263, 2559, 3176 |
| RseI | CAYNNNNRTG | 5 cut(s) | 161, 1266, 2739, 3165, 3218 |
| SacI | GAGCTC | 1 cut(s) | 1713 |
| SapI | GCTCTTC | 1 cut(s) | 420 |
| SatI | GCNGC | 6 cut(s) | 65, 288, 527, 634, 1751, 2813 |
| Sau96I | GGNCC | 1 cut(s) | 2322 |
| ScaI | AGTACT | 1 cut(s) | 2560 |
| SchI | GAGTC | 4 cut(s) | 1561, 2919, 3043, 3246 |
| ScrFI | CCNGG | 6 cut(s) | 201, 485, 1048, 1248, 2043, 2756 |
| SduI | GDGCHC | 4 cut(s) | 1174, 1533, 1713, 2307 |
| SexAI | ACCWGGT | 1 cut(s) | 2041 |
| SfaNI | GCATC | 6 cut(s) | 115, 415, 811, 1715, 2530, 3235 |
| SfcI | CTRYAG | 7 cut(s) | 174, 273, 399, 537, 855, 1678, 2466 |
| Sfr274I | CTCGAG | 1 cut(s) | 2675 |
| SfuI | TTCGAA | 1 cut(s) | 185 |
| SlaI | CTCGAG | 1 cut(s) | 2675 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 161, 1266, 2739, 3165, 3218 |
| SmlI | CTYRAG | 6 cut(s) | 1784, 2027, 2521, 2675, 2828, 2908 |
| SmoI | CTYRAG | 6 cut(s) | 1784, 2027, 2521, 2675, 2828, 2908 |
| SphI | GCATGC | 1 cut(s) | 294 |
| SseBI | AGGCCT | 1 cut(s) | 1046 |
| SsiI | CCGC | 4 cut(s) | 527, 633, 1751, 2231 |
| SspI | AATATT | 5 cut(s) | 449, 550, 882, 1373, 2917 |
| SspMI | CTAG | 9 cut(s) | 17, 791, 1256, 1445, 2069, 2120, 2252, 2921, 3234 |
| SstI | GAGCTC | 1 cut(s) | 1713 |
| StuI | AGGCCT | 1 cut(s) | 1046 |
| StyD4I | CCNGG | 6 cut(s) | 199, 483, 1046, 1246, 2041, 2754 |
| StyI | CCWWGG | 4 cut(s) | 2331, 2979, 3195, 3249 |
| TaiI | ACGT | 4 cut(s) | 844, 1945, 2842, 3204 |
| TaqI | TCGA | 6 cut(s) | 185, 563, 572, 896, 2012, 2676 |
| TaqII | GACCGA | 1 cut(s) | 2903 |
| TatI | WGTACW | 3 cut(s) | 87, 2262, 2558 |
| TauI | GCSGC | 3 cut(s) | 529, 636, 1753 |
| TscAI | CASTG | 7 cut(s) | 1030, 1179, 1498, 1623, 1692, 3079, 3159 |
| TseI | GCWGC | 3 cut(s) | 64, 287, 2812 |
| TspDTI | ATGAA | 8 cut(s) | 279, 789, 1305, 2036, 2519, 2624, 2792, 2856 |
| TspGWI | ACGGA | 1 cut(s) | 3163 |
| TspRI | CASTG | 7 cut(s) | 1030, 1179, 1498, 1623, 1692, 3079, 3159 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2337 |
| Vha464I | CTTAAG | 1 cut(s) | 2828 |
| VneI | GTGCAC | 1 cut(s) | 1529 |
| XapI | RAATTY | 7 cut(s) | 431, 519, 1012, 1280, 1981, 2281, 2614 |
| XbaI | TCTAGA | 2 cut(s) | 1444, 3233 |
| XceI | RCATGY | 2 cut(s) | 294, 3223 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 915 |
| XhoI | CTCGAG | 1 cut(s) | 2675 |
| XmiI | GTMKAC | 3 cut(s) | 228, 713, 2860 |
| XmnI | GAANNNNTTC | 4 cut(s) | 257, 1242, 2216, 2397 |
| XspI | CTAG | 9 cut(s) | 17, 791, 1256, 1445, 2069, 2120, 2252, 2921, 3234 |
| ZrmI | AGTACT | 1 cut(s) | 2560 |
| Zsp2I | ATGCAT | 2 cut(s) | 1521, 1730 |