Rh7BG054600

Disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
3663316 .. 3665896
2581 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG054600.1

Sequence Viewer

Length: 1989 bp
ATGCAAGAGATTATTGTAGCATTTGTTGAACCATTGGCAGAATGGACGGTGAGACCTATTTGTCGACAGTTGAGTTATGTGTTTCACTACGACAGCAACATTGAGCATCTCACCAGAAAGGTTCAGGAACTCCGTGACAAAAGAGAAAGAGTAAACCTGGAGATGAAACCTGCGAGAGAAGCTTCACAGATTATTGGTCCCGGAGTTGATCGCTGGCTCGGTGATGTAGACAAGATCATAGTAGAACAGGAGAAGAGTTTCAGTGAAGTAACTGTAGCAGCAAAGGCGTCGTGTTGTAATGGGTGGCTTCCAAATTTGAAGTGCCGTCATTCTTTGGGAAGGAAAGCTAAGAAGATGACTGATGAGGTGGATAAACTCCTTGCTAATGAACCCAGGACTATAGCGCATCCTGCTCTTCATCCAGAGGTGGAATTCCAACCCACAGAGGACTTATTGCATGAAGGTGGCAGCTCCTCAGATACATCAAACCAAGAACAGGCACCTGCATATGAAGGAAAAAATATTAATTTTGATTCAAGAAGATCAACCATTAGAGATGTGATGGAAGCTCTCAAGGGGAATCAATTCAATCCGATTATCATATGCGGCATGGGCGGCATTGGGAAGACAACATTGATGGGGCAAATTTTTGAGAAAGCGAAGGAAGAGGGTCTGTTCGATGAGTATACAAAGGCAACTGTTAAGGAATCTCTTGACAAAGCTCCTGACGTGATTCAGATTCAAGGTGAACTTGCAGAATATCTAGGCAAGAAGATCCTTGAGGACGAAAAAGAGAGAGGTCCAAGAGCAAGTAAGCTACGTCAAAGATTATCTCAAGGCAACAAGAAGATCCTTGTAATGTTAGACAATGTTTCAACAACAACCTCAGACCTTTTGTGGGAAATAGGGATTCCCCCTAGTTGTAAACTTCTGGTCACATCAAGGCAACAAGATCTATTCAAGGACATGGACAGAAGAAAGAACTTCTCAATTGATGGTTTGCCAGATAGAGATGCCTGGAGTCTATTTAAGAAGACAGCAGGAAGTGCCATCGAATCTGATCTCGAGTTGCATGTTGTAGCAGAAAAGGTTCTGGAGGAATGTGCTGGGTTGCCAATTGCAATTTCAACTATTGGAACGGCACTAAAAGGTGAAAGCATTGCAATTTGGAAGAATGCACTAAAGGAACTAGAAAAGGCTAGCCCAGAAAACGTTCCGGGAGTGATAGAACATGTGTATGGTAAAATAAAGTTCAGCTATGAATGTTTACGAAACGAGGAAGCCAAATCATGTTTTTTGCTGTGTTGCATATTTGAAGAAAGCGCTGATATACCAATCGAAGATTTGGTTAGATACGGGCTTGGGCTTGAGCTCTTTAAAGGCATTGATTCAATGGTTGAAGGAAGAAACCGTATGGAAACATTGGTTCAGACACTTAAAAGTCGCTTTTTATTGTTAGACAGTGATGATAAGCCAGAATTTGTGAGAATGCATGATGTGGTGCATGATGTAGCCGTATATATAGCCTCTGAAGAGTTTGTAGAAAAGAAAAATGATGGGGTTGAAAAGAGAATTGTGGTGAGAGACAAAGCAAAAACTGTGAAATTGATGGATTGGCCTACGAATAGTATTGCTGAGAAATCTACTTATTGCACTTCACTGAGTATTAAGGGGCTTTGTCGGCTTTTACTGTTGAGAACTCTACCTTTAACTGGAATTCCATTGGAGCCTCCACCCACAATTTTAAGAAGAATGAAAGATCTCACGGTTCTAGTAATTGAGAGTATGTCTCCATTGTTACTACTGCCATCACTTCCAGTTTTGAAAAACCTTCATACACTGTGTCTAGATGTGTGCGATCTCAAGTGTGATGTATCTATAATTGGGGAGCTAAGGACACTCGTGATACTCAGTTTGTGTGGATCCGACATTGAACTGGATCCGACATTGAACAGTTGCCTGATACATTTAAAAATTTGTCTAATCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

662

Amino Acids

74.35

Weight (kDa)

5.63

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATPase_2 PF01637 179 - 292 5.3e-06 ATPase domain predominantly from Archaea
NB-ARC PF00931 182 - 348 2.7e-20 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 511
AasI GACNNNNNNGTC 1 cut(s) 60
Acc36I ACCTGC 2 cut(s) 178, 511
AccB1I GGYRCC 1 cut(s) 499
AccI GTMKAC 3 cut(s) 64, 228, 686
AciI CCGC 2 cut(s) 606, 615
AclI AACGTT 1 cut(s) 1212
AclWI GGATC 6 cut(s) 769, 844, 1917, 1930, 1934, 1947
AcsI RAATTY 6 cut(s) 313, 431, 645, 1478, 1716, 1974
AcuI CTGAAG 1 cut(s) 1551
AcyI GRCGYC 1 cut(s) 287
AfeI AGCGCT 1 cut(s) 1324
AfiI CCNNNNNNNGG 3 cut(s) 496, 898, 1712
AflIII ACRYGT 1 cut(s) 1231
AjiI CACGTC 1 cut(s) 730
AjnI CCWGG 3 cut(s) 156, 392, 1016
AjuI GAANNNNNNNTTGG 2 cut(s) 1108, 1140
AluBI AGCT 9 cut(s) 182, 347, 471, 569, 722, 817, 1257, 1372, 1891
AluI AGCT 9 cut(s) 182, 347, 471, 569, 722, 817, 1257, 1372, 1891
Alw21I GWGCWC 1 cut(s) 1374
Alw26I GTCTC 3 cut(s) 46, 1578, 1794
AlwI GGATC 6 cut(s) 769, 844, 1917, 1930, 1934, 1947
Ama87I CYCGRG 1 cut(s) 1064
Aor51HI AGCGCT 1 cut(s) 1324
AoxI GGCC 1 cut(s) 1616
ApeKI GCWGC 2 cut(s) 278, 468
ApoI RAATTY 6 cut(s) 313, 431, 645, 1478, 1716, 1974
AseI ATTAAT 1 cut(s) 525
Asp700I GAANNNNTTC 4 cut(s) 257, 584, 1089, 1212
AspLEI GCGC 2 cut(s) 406, 1325
AspS9I GGNCC 2 cut(s) 197, 800
AsuC2I CCSGG 2 cut(s) 201, 1218
AsuHPI GGTGA 6 cut(s) 61, 103, 233, 758, 1163, 1591
AsuNHI GCTAGC 1 cut(s) 1199
AvaI CYCGRG 1 cut(s) 1064
AvaII GGWCC 2 cut(s) 197, 800
BamHI GGATCC 2 cut(s) 1922, 1939
BanI GGYRCC 1 cut(s) 499
BanII GRGCYC 1 cut(s) 1374
BauI CACGAG 1 cut(s) 1901
BbsI GAAGAC 2 cut(s) 632, 1040
Bbv12I GWGCWC 1 cut(s) 1374
BbvI GCAGC 2 cut(s) 290, 480
BccI CCATC 7 cut(s) 556, 631, 989, 1058, 1550, 1603, 1816
BceAI ACGGC 3 cut(s) 309, 1155, 1499
BcgI CGANNNNNNTGC 2 cut(s) 270, 304
BciT130I CCWGG 3 cut(s) 158, 394, 1018
BcnI CCSGG 2 cut(s) 201, 1218
BcoDI GTCTC 3 cut(s) 46, 1578, 1794
BfaI CTAG 6 cut(s) 764, 918, 1190, 1200, 1772, 1847
BfmI CTRYAG 2 cut(s) 273, 399
BfoI RGCGCY 1 cut(s) 1326
BfuAI ACCTGC 2 cut(s) 178, 511
BglII AGATCT 2 cut(s) 952, 1759
BisI GCNGC 4 cut(s) 279, 469, 607, 616
BlsI GCNGC 4 cut(s) 280, 470, 608, 617
Bme1390I CCNGG 5 cut(s) 158, 201, 394, 1018, 1218
Bme18I GGWCC 2 cut(s) 197, 800
BmeT110I CYCGRG 1 cut(s) 1064
BmgBI CACGTC 1 cut(s) 730
BmgT120I GGNCC 2 cut(s) 197, 800
BmiI GGNNCC 5 cut(s) 199, 501, 1728, 1924, 1941
BmrFI CCNGG 5 cut(s) 158, 201, 394, 1018, 1218
BmsI GCATC 3 cut(s) 115, 415, 1003
BmtI GCTAGC 1 cut(s) 1203
BpiI GAAGAC 2 cut(s) 632, 1040
BplI GAGNNNNNCTC 2 cut(s) 1774, 1806
BpmI CTGGAG 3 cut(s) 179, 1039, 1115
Bpu10I CCTNAGC 1 cut(s) 1892
BpuEI CTTGAG 5 cut(s) 557, 800, 819, 1388, 1847
BpuMI CCSGG 2 cut(s) 201, 1218
BsaHI GRCGYC 1 cut(s) 287
BsaI GGTCTC 1 cut(s) 46
BsaJI CCNNGG 1 cut(s) 392
Bsc4I CCNNNNNNNGG 3 cut(s) 496, 898, 1712
Bse1I ACTGG 3 cut(s) 1717, 1817, 1941
Bse3DI GCAATG 1 cut(s) 1158
BseBI CCWGG 3 cut(s) 158, 394, 1018
BseDI CCNNGG 1 cut(s) 392
BseGI GGATG 2 cut(s) 406, 418
BseLI CCNNNNNNNGG 3 cut(s) 496, 898, 1712
BseMI GCAATG 1 cut(s) 1158
BseMII CTCAG 5 cut(s) 489, 900, 1626, 1652, 1924
BseNI ACTGG 3 cut(s) 1717, 1817, 1941
BseRI GAGGAG 1 cut(s) 463
BseXI GCAGC 2 cut(s) 290, 480
BseYI CCCAGC 1 cut(s) 1106
BshFI GGCC 1 cut(s) 1618
BshNI GGYRCC 1 cut(s) 499
BsiHKAI GWGCWC 1 cut(s) 1374
BsiHKCI CYCGRG 1 cut(s) 1064
BsiSI CCGG 2 cut(s) 201, 1217
BslFI GGGAC 1 cut(s) 183
BslI CCNNNNNNNGG 3 cut(s) 496, 898, 1712
BsmAI GTCTC 3 cut(s) 46, 1578, 1794
BsmFI GGGAC 1 cut(s) 183
BsmI GAATGC 2 cut(s) 1180, 1494
BsnI GGCC 1 cut(s) 1618
Bso31I GGTCTC 1 cut(s) 46
BsoBI CYCGRG 1 cut(s) 1064
Bsp1286I GDGCHC 1 cut(s) 1374
BspACI CCGC 2 cut(s) 606, 615
BspANI GGCC 1 cut(s) 1618
BspCNI CTCAG 5 cut(s) 488, 899, 1627, 1653, 1923
BspLI GGNNCC 5 cut(s) 199, 501, 1728, 1924, 1941
BspMI ACCTGC 2 cut(s) 178, 511
BspOI GCTAGC 1 cut(s) 1203
BspPI GGATC 6 cut(s) 769, 844, 1917, 1930, 1934, 1947
BspQI GCTCTTC 1 cut(s) 420
BspT107I GGYRCC 1 cut(s) 499
BspTNI GGTCTC 1 cut(s) 46
BsrDI GCAATG 1 cut(s) 1158
BsrI ACTGG 3 cut(s) 1717, 1817, 1941
BssECI CCNNGG 1 cut(s) 392
BssNAI GTATAC 1 cut(s) 687
BssNI GRCGYC 1 cut(s) 287
BssSI CACGAG 1 cut(s) 1901
Bst1107I GTATAC 1 cut(s) 687
Bst2BI CACGAG 1 cut(s) 1901
Bst2UI CCWGG 3 cut(s) 158, 394, 1018
Bst6I CTCTTC 4 cut(s) 248, 420, 660, 1527
BstACI GRCGYC 1 cut(s) 287
BstAPI GCANNNNNTGC 1 cut(s) 1046
BstC8I GCNNGC 2 cut(s) 215, 1201
BstDEI CTNAG 7 cut(s) 348, 475, 886, 1635, 1661, 1892, 1910
BstF5I GGATG 2 cut(s) 406, 418
BstH2I RGCGCY 1 cut(s) 1326
BstHHI GCGC 2 cut(s) 406, 1325
BstMAI GTCTC 3 cut(s) 46, 1578, 1794
BstMWI GCNNNNNNNGC 7 cut(s) 179, 284, 410, 612, 615, 1046, 1681
BstNI CCWGG 3 cut(s) 158, 394, 1018
BstNSI RCATGY 2 cut(s) 1076, 1235
BstSCI CCNGG 5 cut(s) 156, 199, 392, 1016, 1216
BstSFI CTRYAG 2 cut(s) 273, 399
BstV1I GCAGC 2 cut(s) 290, 480
BstV2I GAAGAC 2 cut(s) 632, 1040
BstX2I RGATCY 6 cut(s) 774, 849, 952, 1759, 1922, 1939
BstYI RGATCY 6 cut(s) 774, 849, 952, 1759, 1922, 1939
BstZ17I GTATAC 1 cut(s) 687
BsuRI GGCC 1 cut(s) 1618
BtrI CACGTC 1 cut(s) 730
BtsCI GGATG 2 cut(s) 406, 418
BtsIMutI CAGTG 4 cut(s) 268, 1468, 1658, 1838
BveI ACCTGC 2 cut(s) 178, 511
Cac8I GCNNGC 2 cut(s) 215, 1201
CfoI GCGC 2 cut(s) 406, 1325
Cfr13I GGNCC 2 cut(s) 197, 800
CseI GACGC 1 cut(s) 276
CviAII CATG 8 cut(s) 458, 610, 967, 1073, 1232, 1290, 1493, 1505
DdeI CTNAG 7 cut(s) 348, 475, 886, 1635, 1661, 1892, 1910
DraI TTTAAA 2 cut(s) 1378, 1971
DrdI GACNNNNNNGTC 1 cut(s) 60
DseDI GACNNNNNNGTC 1 cut(s) 60
Eam1104I CTCTTC 4 cut(s) 248, 420, 660, 1527
EarI CTCTTC 4 cut(s) 248, 420, 660, 1527
Ecl136II GAGCTC 1 cut(s) 1372
Eco24I GRGCYC 1 cut(s) 1374
Eco31I GGTCTC 1 cut(s) 46
Eco47I GGWCC 2 cut(s) 197, 800
Eco47III AGCGCT 1 cut(s) 1324
Eco53kI GAGCTC 1 cut(s) 1372
Eco57I CTGAAG 1 cut(s) 1551
Eco88I CYCGRG 1 cut(s) 1064
EcoICRI GAGCTC 1 cut(s) 1372
EcoRI GAATTC 2 cut(s) 431, 1716
EcoRII CCWGG 3 cut(s) 156, 392, 1016
EcoT22I ATGCAT 1 cut(s) 1494
EcoT38I GRGCYC 1 cut(s) 1374
FaeI CATG 8 cut(s) 461, 613, 970, 1076, 1235, 1293, 1496, 1508
FalI AAGNNNNNCTT 2 cut(s) 735, 767
FaqI GGGAC 1 cut(s) 183
FatI CATG 8 cut(s) 457, 609, 966, 1072, 1231, 1289, 1492, 1504
FauNDI CATATG 2 cut(s) 508, 602
FblI GTMKAC 3 cut(s) 64, 228, 686
Fnu4HI GCNGC 4 cut(s) 279, 469, 607, 616
FokI GGATG 2 cut(s) 393, 405
FriOI GRGCYC 1 cut(s) 1374
Fsp4HI GCNGC 4 cut(s) 279, 469, 607, 616
FspBI CTAG 6 cut(s) 764, 918, 1190, 1200, 1772, 1847
GlaI GCGC 2 cut(s) 405, 1324
GluI GCNGC 4 cut(s) 279, 469, 607, 616
GsaI CCCAGC 1 cut(s) 1110
GsuI CTGGAG 3 cut(s) 179, 1039, 1115
HaeII RGCGCY 1 cut(s) 1326
HaeIII GGCC 1 cut(s) 1618
HapII CCGG 2 cut(s) 201, 1217
HgaI GACGC 1 cut(s) 276
HhaI GCGC 2 cut(s) 406, 1325
Hin1I GRCGYC 1 cut(s) 287
Hin1II CATG 8 cut(s) 461, 613, 970, 1076, 1235, 1293, 1496, 1508
Hin6I GCGC 2 cut(s) 404, 1323
HinP1I GCGC 2 cut(s) 404, 1323
HincII GTYRAC 1 cut(s) 65
HindII GTYRAC 1 cut(s) 65
HindIII AAGCTT 1 cut(s) 180
HinfI GANTC 9 cut(s) 533, 580, 707, 733, 739, 910, 1021, 1055, 1388
HpaII CCGG 2 cut(s) 201, 1217
HphI GGTGA 6 cut(s) 61, 103, 233, 758, 1163, 1591
Hpy166II GTNNAC 7 cut(s) 65, 154, 229, 687, 749, 926, 1268
Hpy188III TCNNGA 9 cut(s) 125, 422, 537, 713, 725, 1064, 1094, 1847, 1903
Hpy8I GTNNAC 7 cut(s) 65, 154, 229, 687, 749, 926, 1268
Hpy99I CGWCG 1 cut(s) 292
HpyAV CCTTC 6 cut(s) 333, 455, 506, 655, 1394, 1841
HpyCH4IV ACGT 3 cut(s) 729, 820, 1212
HpyF10VI GCNNNNNNNGC 7 cut(s) 179, 284, 410, 612, 615, 1046, 1681
HpyF3I CTNAG 7 cut(s) 348, 475, 886, 1635, 1661, 1892, 1910
HpySE526I ACGT 3 cut(s) 729, 820, 1212
Hsp92I GRCGYC 1 cut(s) 287
Hsp92II CATG 8 cut(s) 461, 613, 970, 1076, 1235, 1293, 1496, 1508
HspAI GCGC 2 cut(s) 404, 1323
LguI GCTCTTC 1 cut(s) 420
LmnI GCTCC 4 cut(s) 476, 727, 1726, 1888
Lsp1109I GCAGC 2 cut(s) 290, 480
LweI GCATC 3 cut(s) 115, 415, 1003
MaeI CTAG 6 cut(s) 764, 918, 1190, 1200, 1772, 1847
MaeII ACGT 3 cut(s) 729, 820, 1212
MaeIII GTNAC 4 cut(s) 134, 268, 934, 1797
MfeI CAATTG 2 cut(s) 990, 1116
MflI RGATCY 6 cut(s) 774, 849, 952, 1759, 1922, 1939
MhlI GDGCHC 1 cut(s) 1374
MlyI GAGTC 1 cut(s) 1030
MmeI TCCRAC 3 cut(s) 460, 1950, 1967
Mph1103I ATGCAT 1 cut(s) 1494
MroXI GAANNNNTTC 4 cut(s) 257, 584, 1089, 1212
MseI TTAA 9 cut(s) 525, 702, 1029, 1377, 1437, 1668, 1709, 1745, 1970
MslI CAYNNNNRTG 2 cut(s) 462, 1236
MspI CCGG 2 cut(s) 201, 1217
MspR9I CCNGG 5 cut(s) 158, 201, 394, 1018, 1218
MunI CAATTG 2 cut(s) 990, 1116
Mva1269I GAATGC 2 cut(s) 1180, 1494
MvaI CCWGG 3 cut(s) 158, 394, 1018
MwoI GCNNNNNNNGC 7 cut(s) 179, 284, 410, 612, 615, 1046, 1681
NciI CCSGG 2 cut(s) 201, 1218
NdeI CATATG 2 cut(s) 508, 602
NheI GCTAGC 1 cut(s) 1199
NlaIII CATG 8 cut(s) 461, 613, 970, 1076, 1235, 1293, 1496, 1508
NlaIV GGNNCC 5 cut(s) 199, 501, 1728, 1924, 1941
NmuCI GTSAC 2 cut(s) 134, 934
NsiI ATGCAT 1 cut(s) 1494
NspI RCATGY 2 cut(s) 1076, 1235
PaeR7I CTCGAG 1 cut(s) 1064
PaqCI CACCTGC 1 cut(s) 511
PciI ACATGT 1 cut(s) 1231
PciSI GCTCTTC 1 cut(s) 420
PctI GAATGC 2 cut(s) 1180, 1494
PdmI GAANNNNTTC 4 cut(s) 257, 584, 1089, 1212
PfeI GAWTC 8 cut(s) 533, 580, 707, 733, 739, 910, 1055, 1388
PfoI TCCNGGA 2 cut(s) 199, 1216
PkrI GCNGC 4 cut(s) 280, 470, 608, 617
PleI GAGTC 1 cut(s) 1029
PpsI GAGTC 1 cut(s) 1029
PscI ACATGT 1 cut(s) 1231
PshBI ATTAAT 1 cut(s) 525
Psp124BI GAGCTC 1 cut(s) 1374
Psp1406I AACGTT 1 cut(s) 1212
Psp6I CCWGG 3 cut(s) 156, 392, 1016
PspFI CCCAGC 1 cut(s) 1106
PspGI CCWGG 3 cut(s) 156, 392, 1016
PspN4I GGNNCC 5 cut(s) 199, 501, 1728, 1924, 1941
PspPI GGNCC 2 cut(s) 197, 800
PsuI RGATCY 6 cut(s) 774, 849, 952, 1759, 1922, 1939
RseI CAYNNNNRTG 2 cut(s) 462, 1236
SacI GAGCTC 1 cut(s) 1374
SalI GTCGAC 1 cut(s) 63
SapI GCTCTTC 1 cut(s) 420
SaqAI TTAA 9 cut(s) 525, 702, 1029, 1377, 1437, 1668, 1709, 1745, 1970
SatI GCNGC 4 cut(s) 279, 469, 607, 616
Sau96I GGNCC 2 cut(s) 197, 800
SchI GAGTC 1 cut(s) 1030
ScrFI CCNGG 5 cut(s) 158, 201, 394, 1018, 1218
SduI GDGCHC 1 cut(s) 1374
SfaNI GCATC 3 cut(s) 115, 415, 1003
SfcI CTRYAG 2 cut(s) 273, 399
Sfr274I CTCGAG 1 cut(s) 1064
SinI GGWCC 2 cut(s) 197, 800
SlaI CTCGAG 1 cut(s) 1064
SmiMI CAYNNNNRTG 2 cut(s) 462, 1236
SmlI CTYRAG 6 cut(s) 572, 779, 834, 1064, 1367, 1862
SmoI CTYRAG 6 cut(s) 572, 779, 834, 1064, 1367, 1862
SsiI CCGC 2 cut(s) 606, 615
SspI AATATT 1 cut(s) 523
SspMI CTAG 6 cut(s) 764, 918, 1190, 1200, 1772, 1847
SstI GAGCTC 1 cut(s) 1374
StyD4I CCNGG 5 cut(s) 156, 199, 392, 1016, 1216
TaiI ACGT 3 cut(s) 732, 823, 1215
TaqI TCGA 5 cut(s) 64, 678, 1053, 1065, 1338
TauI GCSGC 2 cut(s) 609, 618
TfiI GAWTC 8 cut(s) 533, 580, 707, 733, 739, 910, 1055, 1388
Tru1I TTAA 9 cut(s) 525, 702, 1029, 1377, 1437, 1668, 1709, 1745, 1970
Tru9I TTAA 9 cut(s) 525, 702, 1029, 1377, 1437, 1668, 1709, 1745, 1970
TscAI CASTG 4 cut(s) 268, 1468, 1665, 1845
TseFI GTSAC 2 cut(s) 134, 934
TseI GCWGC 2 cut(s) 278, 468
Tsp45I GTSAC 2 cut(s) 134, 934
TspDTI ATGAA 8 cut(s) 179, 402, 407, 474, 525, 1275, 1769, 1823
TspGWI ACGGA 1 cut(s) 122
TspRI CASTG 4 cut(s) 268, 1468, 1665, 1845
VpaK11BI GGWCC 2 cut(s) 197, 800
VspI ATTAAT 1 cut(s) 525
XapI RAATTY 6 cut(s) 313, 431, 645, 1478, 1716, 1974
XbaI TCTAGA 1 cut(s) 1846
XceI RCATGY 2 cut(s) 1076, 1235
XcmI CCANNNNNNNNNTGG 1 cut(s) 39
XhoI CTCGAG 1 cut(s) 1064
XmiI GTMKAC 3 cut(s) 64, 228, 686
XmnI GAANNNNTTC 4 cut(s) 257, 584, 1089, 1212
XspI CTAG 6 cut(s) 764, 918, 1190, 1200, 1772, 1847
Zsp2I ATGCAT 1 cut(s) 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.