FvH4_6g02712

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000203
Physical Location & Seq
Reverse (-)
1551395 .. 1558726
7332 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g02712.t1

Sequence Viewer

Length: 2229 bp
ATGTTAAGACATGGACCGGAAGTGAACAAGAATAATTTTGTCGATGAATCTGGATCTAAGGAATCTGCATATTGTCGTTCACTGACAGCCTGTACAAGTTCTACTGAACTTTTACTAATAATAGGGGTCAAAGATCGGTTGAAGCTGTGGGCCACAATTTTCGATGGAATGGAAGACCTTAAGGTTTTATTGATCTGGCATTCAATCCTCCCATCCCTTCCACTTTTGAAAAATATTCAAACACTTGTTCTAGCGGAGTGCCATCTCAATTTTAATGTTGATGTGATTGGAGAGCTACAGACACTCATGATACTCGATTTAAGTGATTCTGACATCAAGCAGTTGCCTGATACATTCAAAAATTTATCCAATCTCAGAGTGTTACATTTATCGGGATGTCGGAAGCTGAAAGTAATCTCACCCGGTGTTATATCGAGTTTATCTCGACTAGAAGAATTGTACATGTTGTATAGCTTTCAAGATTGGGCGGTTGAGAAACTGGGCTCAGCAGAATCAACCAATTGGATCTCTCAATTGGAGGACGAGGATGCCGAACCAGAACAAGTCGACAGGTGGAAGAGACTCAACAGATTGGCGGTTGAGAAACCAGCCTCAACAGAAACAACAACTGATCGGGTGTCTCAACTGGAGGATGACGAAAGCAGCAAACAAGAGGAAGTCAACAAGCTGTTCCGAGACTTTGTTGATGATGTTTATAAGGCAGAAGGAAACTACGACCAGGTCACAAGGTGGGCCAAGTCTATGGACTGGAGAGTCGGGTTACTTTCAGAGCTGCTCTCCTTGTCCCGTTTGACTACTTTGGAAGTGTTTTTACCACCTATTAAGATTGTGTGGACCAGTAAGCTGTTTGATAATCTTGACAGATTTAAGATCTCTATAGGATGGAAGCATTATGGTTTCTTTGACTTGAGTGTTGAGGATCTAGATGTTGCGGGTACTGAAATCAGCTTGTTGTTAAAGAAAACCAAGAGCCTCCGGTTAAAGACGAAGAATTTGAAAGATCCTCTCAATGTGTTGGATGTAAACTGTGGTGCAACCTTGAAGTCACTTACCCTTGATGACTGTGATTCTCTAGAATATCTGATTGACACGACACTTGAGAAACATACTCCACCAAGTGTCTTCCCTGTCTTGGATGATTTGACAATCAACGGAGCAAAGAGGCTGAAAGAGATTTTTCATGGTGACCTGCCACCAGGCTCGCTTCAGAAACTAAGTAGGCTAAGAATAGAGGATTGCCAGTCCGTAGAAGCAATTTTTGACTTGGAAGGATCTGAACATCATGTCAAAGAGATCAACTTCCTTAGTTTGACAGAGTTGGTACTCGAAGGTCTACCATGCTTCACCGGGATCAGCAAAAGTAGGCTGAATAGGCAACTGGAAGTCAGCAGTCTCTACCGGGATAGTTTGACTGATGAGCAGTCACTTTTCTCCGACCCCAAGGTTATCTTTCCAGTCTTGAAATACCTATCCATTGAACACCTGGGCGAGTTGAAAAAGATATGGAATGGCCAACTTTCACCCACCTCCTTCTCTAAATTAGAAGCTCTCACTGTCAAGCATTGTGACAAACTACTGCATTTGGTACCGACACAAATGCAAAATAGATTGCAGACATTGGTGTACATACGAGTGGAGGAGTGTTCTTCACTGGAAGGGATTTTTGAAGTGAGAAGATTGACCGTCAATGAAAGGATTGCTTCAGTTTCTCGGACAGACAAATTACCTTCAAATATTTCCCAACCTGATCAAGGAATGCAAATAAATGATATCATGGGTTGCAGACAATCTTGCCAAGGCTTTCAGAATTTAACCAAACTGTATATTGCTTCTTGTGGTAGTTTGAGATACCTGCTCTCTCCTTCGATTGCTGGACGTCTTGTCAAGCTCCAAACACTACAGATACAGAATTGCCAGAAGATGGAAGCAATAGTCGCAGCAGATGAGGGTGAAGACACAGAGAATGAAAGCATGCTCCCTCGGCTAGATCGTTTGGATCTTAATAATCTACCAAATCTTGGAAGCTTTTCGCAAGGCAGATATACTTTTGATTGGCCACTAGTGACATGGATCTGGATTAACGAGTGCAACAAAATGAACAAATTTTGTTCAGGATCCCTCCGCATATCCAGGGCAGTGGACATAACTGTCCATAATTCTGGTGAGAGTCTAGAGCGTGAGCTCAAGGATTGCAGGAAAACAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

743

Amino Acids

84.3

Weight (kDa)

5.35

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 95 - 168 1e-08 Leucine-rich repeat region
LRR_8 PF13855 101 - 155 1.8e-08 Leucine rich repeat
LRR_RPS2 PF23247 376 - 472 7.7e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 498 - 646 1.2e-25 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 604 - 683 7.1e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 717
AasI GACNNNNNNGTC 2 cut(s) 773, 2168
AatII GACGTC 1 cut(s) 1900
Acc36I ACCTGC 2 cut(s) 1218, 1881
Acc65I GGTACC 1 cut(s) 1606
AccB1I GGYRCC 1 cut(s) 1606
AccB7I CCANNNNNTGG 2 cut(s) 1942, 2039
AccI GTMKAC 2 cut(s) 567, 1354
AciI CCGC 5 cut(s) 254, 488, 596, 953, 2143
AcoI YGGCCR 2 cut(s) 1531, 2075
AcsI RAATTY 4 cut(s) 361, 1012, 1828, 2123
AcuI CTGAAG 2 cut(s) 1211, 1707
AcyI GRCGYC 1 cut(s) 1897
AdeI CACNNNGTG 3 cut(s) 425, 750, 1139
AfaI GTAC 6 cut(s) 94, 461, 958, 1344, 1608, 1646
AfiI CCNNNNNNNGG 4 cut(s) 1153, 1772, 1942, 2039
AflII CTTAAG 1 cut(s) 179
AflIII ACRYGT 1 cut(s) 462
AhdI GACNNNNNGTC 1 cut(s) 1901
AhlI ACTAGT 1 cut(s) 2080
AjnI CCWGG 4 cut(s) 738, 1216, 1503, 2150
Alw21I GWGCWC 1 cut(s) 2205
Alw26I GTCTC 4 cut(s) 574, 645, 690, 1418
AoxI GGCC 4 cut(s) 150, 753, 1531, 2075
ApeKI GCWGC 3 cut(s) 663, 793, 1958
ApoI RAATTY 4 cut(s) 361, 1012, 1828, 2123
ArsI GACNNNNNNTTYG 2 cut(s) 997, 1029
Asp700I GAANNNNTTC 1 cut(s) 2047
Asp718I GGTACC 1 cut(s) 1606
AspS9I GGNCC 4 cut(s) 14, 150, 753, 855
AsuC2I CCSGG 3 cut(s) 423, 1369, 1421
AsuHPI GGTGA 6 cut(s) 411, 1217, 1357, 1533, 1982, 2195
AvaII GGWCC 2 cut(s) 14, 855
BalI TGGCCA 2 cut(s) 1533, 2077
BamHI GGATCC 1 cut(s) 2135
BanI GGYRCC 1 cut(s) 1606
BanII GRGCYC 2 cut(s) 506, 2205
BarI GAAGNNNNNNTAC 2 cut(s) 816, 848
BbsI GAAGAC 3 cut(s) 180, 1135, 1980
Bbv12I GWGCWC 1 cut(s) 2205
BbvI GCAGC 3 cut(s) 675, 780, 1970
BccI CCATC 5 cut(s) 158, 220, 270, 897, 1936
BcgI CGANNNNNNTGC 2 cut(s) 1600, 1634
BciT130I CCWGG 4 cut(s) 740, 1218, 1505, 2152
BclI TGATCA 1 cut(s) 1768
BcnI CCSGG 3 cut(s) 423, 1369, 1421
BcoDI GTCTC 4 cut(s) 574, 645, 690, 1418
BcuI ACTAGT 1 cut(s) 2080
BfaI CTAG 7 cut(s) 251, 449, 944, 1094, 2006, 2081, 2192
BfmI CTRYAG 3 cut(s) 296, 897, 1919
BfrI CTTAAG 1 cut(s) 179
BfuAI ACCTGC 2 cut(s) 1218, 1881
BglII AGATCT 1 cut(s) 891
BisI GCNGC 3 cut(s) 664, 794, 1959
BlpI GCTNAGC 1 cut(s) 505
BlsI GCNGC 3 cut(s) 665, 795, 1960
Bme1390I CCNGG 7 cut(s) 423, 740, 1218, 1369, 1421, 1505, 2152
Bme18I GGWCC 2 cut(s) 14, 855
BmeRI GACNNNNNGTC 1 cut(s) 1901
BmgT120I GGNCC 4 cut(s) 14, 150, 753, 855
BmiI GGNNCC 2 cut(s) 1608, 2137
BmrFI CCNGG 7 cut(s) 423, 740, 1218, 1369, 1421, 1505, 2152
BmrI ACTGGG 1 cut(s) 509
BmsI GCATC 1 cut(s) 538
BmuI ACTGGG 1 cut(s) 509
BpiI GAAGAC 3 cut(s) 180, 1135, 1980
BplI GAGNNNNNCTC 4 cut(s) 427, 459, 782, 814
BpmI CTGGAG 2 cut(s) 668, 790
Bpu1102I GCTNAGC 1 cut(s) 505
BpuEI CTTGAG 3 cut(s) 949, 1139, 2189
BpuMI CCSGG 3 cut(s) 423, 1369, 1421
BsaHI GRCGYC 1 cut(s) 1897
BsaJI CCNNGG 5 cut(s) 1461, 1504, 1816, 2000, 2151
BsaWI WCCGGW 2 cut(s) 16, 996
Bsc4I CCNNNNNNNGG 4 cut(s) 1153, 1772, 1942, 2039
Bse1I ACTGG 8 cut(s) 504, 651, 773, 858, 1261, 1404, 1475, 1677
BseBI CCWGG 4 cut(s) 740, 1218, 1505, 2152
BseDI CCNNGG 5 cut(s) 1461, 1504, 1816, 2000, 2151
BseGI GGATG 7 cut(s) 212, 401, 553, 658, 908, 1045, 1162
BseLI CCNNNNNNNGG 4 cut(s) 1153, 1772, 1942, 2039
BseMII CTCAG 2 cut(s) 388, 519
BseNI ACTGG 8 cut(s) 504, 651, 773, 858, 1261, 1404, 1475, 1677
BseRI GAGGAG 1 cut(s) 1673
BseXI GCAGC 3 cut(s) 675, 780, 1970
BshFI GGCC 4 cut(s) 152, 755, 1533, 2077
BshNI GGYRCC 1 cut(s) 1606
BsiHKAI GWGCWC 1 cut(s) 2205
BsiSI CCGG 5 cut(s) 17, 423, 997, 1368, 1420
BslFI GGGAC 1 cut(s) 790
BslI CCNNNNNNNGG 4 cut(s) 1153, 1772, 1942, 2039
BsmAI GTCTC 4 cut(s) 574, 645, 690, 1418
BsmFI GGGAC 1 cut(s) 790
BsmI GAATGC 2 cut(s) 199, 1782
BsnI GGCC 4 cut(s) 152, 755, 1533, 2077
Bsp1286I GDGCHC 2 cut(s) 506, 2205
Bsp1407I TGTACA 3 cut(s) 92, 459, 1644
Bsp1720I GCTNAGC 1 cut(s) 505
BspACI CCGC 5 cut(s) 254, 488, 596, 953, 2143
BspANI GGCC 4 cut(s) 152, 755, 1533, 2077
BspCNI CTCAG 2 cut(s) 387, 518
BspHI TCATGA 1 cut(s) 306
BspLI GGNNCC 2 cut(s) 1608, 2137
BspMI ACCTGC 2 cut(s) 1218, 1881
BspT107I GGYRCC 1 cut(s) 1606
BspTI CTTAAG 1 cut(s) 179
BsrGI TGTACA 3 cut(s) 92, 459, 1644
BsrI ACTGG 8 cut(s) 504, 651, 773, 858, 1261, 1404, 1475, 1677
BssECI CCNNGG 5 cut(s) 1461, 1504, 1816, 2000, 2151
BssNI GRCGYC 1 cut(s) 1897
BssT1I CCWWGG 2 cut(s) 1461, 1816
Bst2UI CCWGG 4 cut(s) 740, 1218, 1505, 2152
Bst4CI ACNGT 6 cut(s) 1049, 1085, 1576, 1705, 1842, 2170
Bst6I CTCTTC 1 cut(s) 572
BstACI GRCGYC 1 cut(s) 1897
BstAFI CTTAAG 1 cut(s) 179
BstAUI TGTACA 3 cut(s) 92, 459, 1644
BstC8I GCNNGC 2 cut(s) 1223, 1994
BstDEI CTNAG 6 cut(s) 57, 374, 505, 1235, 1244, 1325
BstEII GGTNACC 1 cut(s) 1205
BstENI CCTNNNNNAGG 1 cut(s) 1770
BstF5I GGATG 7 cut(s) 212, 401, 553, 658, 908, 1045, 1162
BstMAI GTCTC 4 cut(s) 574, 645, 690, 1418
BstMWI GCNNNNNNNGC 3 cut(s) 1393, 1955, 2002
BstNI CCWGG 4 cut(s) 740, 1218, 1505, 2152
BstNSI RCATGY 2 cut(s) 466, 1996
BstPI GGTNACC 1 cut(s) 1205
BstSCI CCNGG 7 cut(s) 421, 738, 1216, 1367, 1419, 1503, 2150
BstSFI CTRYAG 3 cut(s) 296, 897, 1919
BstV1I GCAGC 3 cut(s) 675, 780, 1970
BstV2I GAAGAC 3 cut(s) 180, 1135, 1980
BstX2I RGATCY 9 cut(s) 53, 525, 891, 940, 1021, 1292, 2017, 2091, 2135
BstXI CCANNNNNNTGG 3 cut(s) 763, 2158, 2180
BstYI RGATCY 9 cut(s) 53, 525, 891, 940, 1021, 1292, 2017, 2091, 2135
BsuRI GGCC 4 cut(s) 152, 755, 1533, 2077
BtsCI GGATG 7 cut(s) 212, 401, 553, 658, 908, 1045, 1162
BtsI GCAGTG 1 cut(s) 2163
BtsIMutI CAGTG 4 cut(s) 80, 1572, 1670, 2163
BveI ACCTGC 2 cut(s) 1218, 1881
Cac8I GCNNGC 2 cut(s) 1223, 1994
CciI TCATGA 1 cut(s) 306
Cfr13I GGNCC 4 cut(s) 14, 150, 753, 855
CsiI ACCWGGT 1 cut(s) 738
Csp6I GTAC 6 cut(s) 93, 460, 957, 1343, 1607, 1645
CviAII CATG 9 cut(s) 11, 307, 463, 1202, 1304, 1359, 1795, 1993, 2088
CviQI GTAC 6 cut(s) 93, 460, 957, 1343, 1607, 1645
DdeI CTNAG 6 cut(s) 57, 374, 505, 1235, 1244, 1325
DraIII CACNNNGTG 3 cut(s) 425, 750, 1139
DrdI GACNNNNNNGTC 2 cut(s) 773, 2168
DriI GACNNNNNGTC 1 cut(s) 1901
DseDI GACNNNNNNGTC 2 cut(s) 773, 2168
EaeI YGGCCR 2 cut(s) 1531, 2075
Eam1104I CTCTTC 1 cut(s) 572
Eam1105I GACNNNNNGTC 1 cut(s) 1901
EarI CTCTTC 1 cut(s) 572
Ecl136II GAGCTC 1 cut(s) 2203
Eco130I CCWWGG 2 cut(s) 1461, 1816
Eco24I GRGCYC 2 cut(s) 506, 2205
Eco32I GATATC 1 cut(s) 1792
Eco47I GGWCC 2 cut(s) 14, 855
Eco53kI GAGCTC 1 cut(s) 2203
Eco57I CTGAAG 2 cut(s) 1211, 1707
Eco91I GGTNACC 1 cut(s) 1205
EcoICRI GAGCTC 1 cut(s) 2203
EcoNI CCTNNNNNAGG 1 cut(s) 1770
EcoO65I GGTNACC 1 cut(s) 1205
EcoRII CCWGG 4 cut(s) 738, 1216, 1503, 2150
EcoRV GATATC 1 cut(s) 1792
EcoT14I CCWWGG 2 cut(s) 1461, 1816
EcoT38I GRGCYC 2 cut(s) 506, 2205
ErhI CCWWGG 2 cut(s) 1461, 1816
FaeI CATG 9 cut(s) 14, 310, 466, 1205, 1307, 1362, 1798, 1996, 2091
FalI AAGNNNNNCTT 4 cut(s) 1454, 1486, 1705, 1737
FaqI GGGAC 1 cut(s) 790
FatI CATG 9 cut(s) 10, 306, 462, 1201, 1303, 1358, 1794, 1992, 2087
FauI CCCGC 1 cut(s) 946
FbaI TGATCA 1 cut(s) 1768
FblI GTMKAC 2 cut(s) 567, 1354
Fnu4HI GCNGC 3 cut(s) 664, 794, 1959
FokI GGATG 7 cut(s) 199, 408, 560, 665, 915, 1052, 1169
FriOI GRGCYC 2 cut(s) 506, 2205
Fsp4HI GCNGC 3 cut(s) 664, 794, 1959
FspBI CTAG 7 cut(s) 251, 449, 944, 1094, 2006, 2081, 2192
GluI GCNGC 3 cut(s) 664, 794, 1959
GsuI CTGGAG 2 cut(s) 668, 790
HaeIII GGCC 4 cut(s) 152, 755, 1533, 2077
HapII CCGG 5 cut(s) 17, 423, 997, 1368, 1420
Hin1I GRCGYC 1 cut(s) 1897
Hin1II CATG 9 cut(s) 14, 310, 466, 1205, 1307, 1362, 1798, 1996, 2091
HincII GTYRAC 2 cut(s) 568, 682
HindII GTYRAC 2 cut(s) 568, 682
HindIII AAGCTT 1 cut(s) 2044
HinfI GANTC 8 cut(s) 47, 62, 326, 512, 582, 774, 1088, 2188
HpaII CCGG 5 cut(s) 17, 423, 997, 1368, 1420
HphI GGTGA 6 cut(s) 411, 1217, 1357, 1533, 1982, 2195
Hpy166II GTNNAC 9 cut(s) 25, 80, 568, 682, 855, 1045, 1355, 1645, 2161
Hpy8I GTNNAC 9 cut(s) 25, 80, 568, 682, 855, 1045, 1355, 1645, 2161
HpyAV CCTTC 8 cut(s) 227, 719, 1283, 1343, 1561, 1670, 1758, 1893
HpyCH4III ACNGT 6 cut(s) 1049, 1085, 1576, 1705, 1842, 2170
HpyCH4IV ACGT 1 cut(s) 1897
HpyCH4V TGCA 9 cut(s) 68, 1055, 1600, 1621, 1633, 1780, 1803, 2109, 2214
HpyF10VI GCNNNNNNNGC 3 cut(s) 1393, 1955, 2002
HpyF3I CTNAG 6 cut(s) 57, 374, 505, 1235, 1244, 1325
HpySE526I ACGT 1 cut(s) 1897
Hsp92I GRCGYC 1 cut(s) 1897
Hsp92II CATG 9 cut(s) 14, 310, 466, 1205, 1307, 1362, 1798, 1996, 2091
KpnI GGTACC 1 cut(s) 1610
Ksp22I TGATCA 1 cut(s) 1768
LmnI GCTCC 3 cut(s) 1175, 1914, 2001
Lsp1109I GCAGC 3 cut(s) 675, 780, 1970
LweI GCATC 1 cut(s) 538
MabI ACCWGGT 1 cut(s) 738
MaeI CTAG 7 cut(s) 251, 449, 944, 1094, 2006, 2081, 2192
MaeII ACGT 1 cut(s) 1897
MaeIII GTNAC 8 cut(s) 381, 742, 780, 1065, 1205, 1443, 1586, 2083
MboII GAAGA 9 cut(s) 185, 464, 589, 1021, 1135, 1659, 1707, 1951, 1985
MfeI CAATTG 2 cut(s) 520, 533
MflI RGATCY 9 cut(s) 53, 525, 891, 940, 1021, 1292, 2017, 2091, 2135
MhlI GDGCHC 2 cut(s) 506, 2205
MlsI TGGCCA 2 cut(s) 1533, 2077
MluNI TGGCCA 2 cut(s) 1533, 2077
MlyI GAGTC 3 cut(s) 576, 783, 2197
MmeI TCCRAC 3 cut(s) 380, 1017, 1479
Mox20I TGGCCA 2 cut(s) 1533, 2077
MroXI GAANNNNTTC 1 cut(s) 2047
MscI TGGCCA 2 cut(s) 1533, 2077
MslI CAYNNNNRTG 1 cut(s) 1652
Msp20I TGGCCA 2 cut(s) 1533, 2077
MspCI CTTAAG 1 cut(s) 179
MspI CCGG 5 cut(s) 17, 423, 997, 1368, 1420
MspR9I CCNGG 7 cut(s) 423, 740, 1218, 1369, 1421, 1505, 2152
MunI CAATTG 2 cut(s) 520, 533
Mva1269I GAATGC 2 cut(s) 199, 1782
MvaI CCWGG 4 cut(s) 740, 1218, 1505, 2152
MwoI GCNNNNNNNGC 3 cut(s) 1393, 1955, 2002
NciI CCSGG 3 cut(s) 423, 1369, 1421
NlaIII CATG 9 cut(s) 14, 310, 466, 1205, 1307, 1362, 1798, 1996, 2091
NlaIV GGNNCC 2 cut(s) 1608, 2137
NmeAIII GCCGAG 1 cut(s) 1981
NmuCI GTSAC 6 cut(s) 742, 1065, 1205, 1443, 1586, 2083
NspI RCATGY 2 cut(s) 466, 1996
PaeI GCATGC 1 cut(s) 1996
PagI TCATGA 1 cut(s) 306
PciI ACATGT 1 cut(s) 462
PcsI WCGNNNNNNNCGW 2 cut(s) 549, 2008
PctI GAATGC 2 cut(s) 199, 1782
PdmI GAANNNNTTC 1 cut(s) 2047
PfeI GAWTC 5 cut(s) 47, 62, 326, 512, 1088
PflFI GACNNNGTC 1 cut(s) 740
PflMI CCANNNNNTGG 2 cut(s) 1942, 2039
PkrI GCNGC 3 cut(s) 665, 795, 1960
PleI GAGTC 3 cut(s) 576, 782, 2196
PpsI GAGTC 3 cut(s) 576, 782, 2196
PscI ACATGT 1 cut(s) 462
PsiI TTATAA 1 cut(s) 717
Psp124BI GAGCTC 1 cut(s) 2205
Psp6I CCWGG 4 cut(s) 738, 1216, 1503, 2150
PspEI GGTNACC 1 cut(s) 1205
PspGI CCWGG 4 cut(s) 738, 1216, 1503, 2150
PspN4I GGNNCC 2 cut(s) 1608, 2137
PspPI GGNCC 4 cut(s) 14, 150, 753, 855
PsuI RGATCY 9 cut(s) 53, 525, 891, 940, 1021, 1292, 2017, 2091, 2135
PsyI GACNNNGTC 1 cut(s) 740
RsaI GTAC 6 cut(s) 94, 461, 958, 1344, 1608, 1646
RsaNI GTAC 6 cut(s) 93, 460, 957, 1343, 1607, 1645
RseI CAYNNNNRTG 1 cut(s) 1652
SacI GAGCTC 1 cut(s) 2205
SalI GTCGAC 1 cut(s) 566
SatI GCNGC 3 cut(s) 664, 794, 1959
Sau96I GGNCC 4 cut(s) 14, 150, 753, 855
SchI GAGTC 3 cut(s) 576, 783, 2197
ScrFI CCNGG 7 cut(s) 423, 740, 1218, 1369, 1421, 1505, 2152
SduI GDGCHC 2 cut(s) 506, 2205
SexAI ACCWGGT 1 cut(s) 738
SfaNI GCATC 1 cut(s) 538
SfcI CTRYAG 3 cut(s) 296, 897, 1919
SinI GGWCC 2 cut(s) 14, 855
SmiMI CAYNNNNRTG 1 cut(s) 1652
SmlI CTYRAG 4 cut(s) 179, 928, 1118, 2204
SmoI CTYRAG 4 cut(s) 179, 928, 1118, 2204
SpeI ACTAGT 1 cut(s) 2080
SphI GCATGC 1 cut(s) 1996
SsiI CCGC 5 cut(s) 254, 488, 596, 953, 2143
SspI AATATT 2 cut(s) 235, 1756
SspMI CTAG 7 cut(s) 251, 449, 944, 1094, 2006, 2081, 2192
SstI GAGCTC 1 cut(s) 2205
StyD4I CCNGG 7 cut(s) 421, 738, 1216, 1367, 1419, 1503, 2150
StyI CCWWGG 2 cut(s) 1461, 1816
TaaI ACNGT 6 cut(s) 1049, 1085, 1576, 1705, 1842, 2170
TaiI ACGT 1 cut(s) 1900
TaqI TCGA 8 cut(s) 42, 162, 315, 434, 445, 567, 1347, 1886
TatI WGTACW 3 cut(s) 92, 459, 1644
TfiI GAWTC 5 cut(s) 47, 62, 326, 512, 1088
TscAI CASTG 4 cut(s) 87, 1579, 1677, 2163
TseFI GTSAC 6 cut(s) 742, 1065, 1205, 1443, 1586, 2083
TseI GCWGC 3 cut(s) 663, 793, 1958
Tsp45I GTSAC 6 cut(s) 742, 1065, 1205, 1443, 1586, 2083
TspDTI ATGAA 5 cut(s) 60, 1190, 1725, 2001, 2132
TspGWI ACGGA 2 cut(s) 1188, 1255
TspRI CASTG 4 cut(s) 87, 1579, 1677, 2163
Tth111I GACNNNGTC 1 cut(s) 740
Van91I CCANNNNNTGG 2 cut(s) 1942, 2039
Vha464I CTTAAG 1 cut(s) 179
VpaK11BI GGWCC 2 cut(s) 14, 855
XagI CCTNNNNNAGG 1 cut(s) 1770
XapI RAATTY 4 cut(s) 361, 1012, 1828, 2123
XbaI TCTAGA 3 cut(s) 943, 1093, 2191
XceI RCATGY 2 cut(s) 466, 1996
XcmI CCANNNNNNNNNTGG 2 cut(s) 1501, 2085
XmiI GTMKAC 2 cut(s) 567, 1354
XmnI GAANNNNTTC 1 cut(s) 2047
XspI CTAG 7 cut(s) 251, 449, 944, 1094, 2006, 2081, 2192
ZraI GACGTC 1 cut(s) 1898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.