FvH4_6g02820

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000203
Physical Location & Seq
Reverse (-)
1591828 .. 1595502
3675 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g02820.t1

Sequence Viewer

Length: 3675 bp
ATGGCAGATATTGTCATTTCAGTTGTTGGAAAGTTAGCAGAGTACATAGTGGAACCTATTCTGCGACAGTTTGGTTATCTGATTAACTACAAGAGCAATGTTGAACATCTCACCGAGAAGGTGACAACTCTGACTGCTACAAGAGACGGGGTACAACGACAAATCGAAAGAGCAACTAGAAACTCAGAGGAGATTCATCCCGTAGTTCGGAACTGGTTGGACCGAGTAGAGCAGACCATACAAGAAAAGGAGACATGTTTTGAAGAAGGAAGAGTAGCCAAGGCAACAACATGCTGCAGCTCCAATGGATGGTGTCCAAATCTGAAGGGTCGTCATTCCTTGAGTAGGAAAGCAGCGAAGATGGCTGAAAAGCTTGATAAGCTTATTACAGATGGAAATTTCACCACCATATCATGTCCTGCTCGTCCGCCGAAGCTTGATTATCCTGCCATACCATATTATGAGGATTCCACTCATGTCCTGGTGAAGCCACATGAAGGGGCTAGCTCCTCCTCTGGAACATCCAAACCTGCTAAAGTACATGTGCCTATGGATCTCTCTGAGCGTCTGGAATACAGGCTGCCTTATACAAAGGATCTCTTGACGGCTCTGCAAGATGACAAGATCAGCATGATTGGCATTTCTGGGACATTCAGAGAGATAGATATGGTAACAACCAAAGAGTTCACCAAAAGAATGAAACACAGAAATCTCTTTGACGAGGTTGTGATGGCAGTTGTGTCTCAGCATCCAGACTTGAAACGAATACAAGATGAGATTGCAGAAATGCTGGACCTGAAATTAGAGGAGAACGGTAGTTTGGTGGAACGGGCAGAGAGGCTACAAGCTCTTTTACTGGCGTCAGGTTCTAAGAGGATTCTTGTAATACTGACTGATATCTGTGGAATACTTGATTTGGATGCAATTGGAATTCCTCATCTTGATATCATGGAAAGCTGCAAGATCGTGTTGATTTCAGAACTACAAGATGTGTTTGGTGAAATGGAGACTCAGAGCAATTTCAGATTGATATTACATTCCACTCCCAGAGCAAGACCTGTTGAGTTTGAGTCAAGAATTTCAGTCATCAGAGATGTAATGGATGCACTGACAGATGATGAATCCAATCCCATTGTAATATGTGGGATGGGGGGTATCGGGAAAACAACTTTGGTGAAGGAGATTGGTGCAAAAGCAGGTGAAGTACAACTATTTGATGAAATTGCAGTTGCAGAGTTCACCCAAGAACCTGATCTCATCAGAATTCAAGGTCAAATTGCTAAAGCTCTAGGCCTGCAACTTACCGGAGAGGACGACAGAGCAGCCAAGTTACGTGAAAGATTATCACAGGGTAACAAAAATGTCCTTTTAATATTGGACAATGTCTGGACACAACTAGATTTGTGGGAAATAGGGATTCCAATTTCCCGTGATAAAAAATGTTGTAAACTTCTGGTAACATCACGGGACCAAGATATTTTCAAAGAGATGAAAACCAGAAAACATTTCCACATTGGTGGTTTGCCAAAACATGATGCCTGGAGTTTGTTTAAGAAGGTGGCAGGAGGTTCCATTGAATCCGATCTCAAGCTGCGTCCAATAGCAGAACAAGTTCTTGCTGAATGTGATGGTTTACCAGTTGCAATTTCTACAGTTGGAGGGGCACTACAAGGTAAAATCATTTCAATATGGAATGATGCACTGAGACAACTAAAACAGGCTTGCCCAGAAGACGTGCCAGGAGTGATAAAGCATGTGTATGGGAGAATAGTGTTCAGCTACGAATGTCTACCAAGCGAGCAAGCCAAGTCATGTTTTTTGCTATGTTGTCTATTTCCAGAAAGTGAAGATTTTGAAATTGAAGAGTTGGTTAGAATTGCGATTGGGCTTGGGCTTTTGAAACGCATTGATTCAATATCTCAAGGAAGGGATTGCGTAGAATCATTGGTTGACACACTCAAAAGTCGTTCCTTATTGTTAGACGGGGATTGGAAACAGTGTGTCAGAATGCATGATGTGGTGCGTGATGTAGCCGTGTATATAGCCTCCGAAGAGTTTGCACAAAAGAAGAATGATGAGTCTGAAAAGAGAATCGTGTTAAGACATGGACCGGAAGTGAACCAGAATAATTTTGTCTATGAATCTGGATCTGAGGAATCTGCATATTGTCGTTCACTGACAGCCTGTACAAGTTCTACTGAACTTTTACTAATAAGGGTCAAAGATCCGTGGGAGCCGAAGCTGAAGCTGCTGGACACAATTTTCGATGGAATGGAAGACCTTAAGGTTTTATTGATCGGGCGTTCAATCCTCCCATCCCTTCCACTTTTGAAAAATATTCAAACACTTGTTCTAGTGAAGTGCCATCTCAATTTTAATGTTGATGTGATTGGAGAGCTACCGGCACTCATGATACTCGATTTAAGTTGGTCTGACATCAAGCAGTTGCCTGATACATTCAAAAATTTATCCAATCTCAAAGTGTTAAATTTATCGGGATGTCAGAAGCTGAAAGTAATCTCACCCGGTGTTATATCGAGTTTATCTCGACTAGAAGAATTGTACATGTCGTATAGCTTTCAAGATTGGGTGCTTGAGAAACTGGGCTCAGCAGAATCAACCAATTGGGTCTCTCAATTGGAGGACGGGGATGCCGAACCAGAACAAGTCGACATGTGGAAGAGACTCAACAGCTTGGCGGTTGAGAAACCAGCCTCAACAGAAACAACAACTGATCGGGTGTCTCAACTGGAGGATGACGAAAGCAGCAAACAAGAGGAAGTCAACGACCTGTTCCGAGACTTTGTTTATAAGGCAGAAGGAAACTACGACCAGGTCACAAGGTGGGCCAACTCTATGGACTGGAGAGTCGGGTTACTTTCAGAGCTGCTCTCCTTGTCCCGTTTGACTACTTTGGAAGTGTTTTTACCACCTATTGAGATTGTGCGGACCAGTAAGCTGTTTCATAATCTTGACAGATTTAAGATCTCTATAGGATGGAAGCGTTATGGTTTCTTTGACTTGAGTGTTGAGGATCTAGATGTTGCGGGTACTGGAATCAGCTTGTTGTTAAAGAAAACCAAGAGCCTCGAGTTAAAGATGAAGAGTTTGACAGATCCTCTCAATGTGTGGGATGTAAACTGTTGTGCAACCTTGAAGTCACTTTCCCTTGAAGACTGTGATTCTCTAGAATATCTGATTGACACGACACTTGAGAAACATACTCCACAAAGTGTCTTCCCTGTCTTGGGTTATTTGAGAATCGAGAGAGCAAAGAGGCTGAAAGAGATTTTTCATGGTGACCTGCCACCAGGCTCGCTTCAGAAACTAGAAACGCTATGGTTGTATGGTCTTCCTGAATTGACGAACATTTGGACTATTGAAAGTCAATCTAGATGGATGGGAGATCAACTGGCAGTGCTCGAGTCCATAACAATACAGGATTGCCAGTCCGTAGAAGCAATTTTTGGCTTGGAAGGATCGGAACATCATGTCAAAGAGATCAACTTCCTTAGTTTGACAAGGTTGGAACTCGAAGGTCTACCATGCTTCACCGGGATCAGCAAAAGTAGGCTGAATAGGCAACTGGAAGTCAGCAGTCTCTACCGGGATAGTTTGACTGATGAGCAGTCACTTTTCTCTGACCCCAAGGTATCTGTTCCTTTTCTGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1225

Amino Acids

138.01

Weight (kDa)

5.24

Isoelectric Point (pI)

43.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 229 - 339 3.4e-08 NB-ARC domain
NB-ARC PF00931 363 - 521 7.7e-26 NB-ARC domain
LRR_14 PF23598 780 - 859 2.3e-06 Leucine-rich repeat region
LRR_8 PF13855 801 - 858 5.9e-09 Leucine rich repeat
LRR_RPS2 PF23247 1091 - 1200 3.5e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2811
AarI CACCTGC 1 cut(s) 1187
AasI GACNNNNNNGTC 1 cut(s) 2867
Acc36I ACCTGC 3 cut(s) 538, 1187, 3312
AccB7I CCANNNNNTGG 1 cut(s) 309
AccI GTMKAC 3 cut(s) 1789, 2670, 3541
AciI CCGC 4 cut(s) 428, 2699, 2947, 3047
AclWI GGATC 8 cut(s) 561, 603, 2155, 2219, 3042, 3110, 3487, 3566
AcsI RAATTY 6 cut(s) 397, 930, 1077, 1263, 2464, 2488
AcuI CTGAAG 3 cut(s) 344, 2264, 3305
AcyI GRCGYC 1 cut(s) 860
AdeI CACNNNGTG 3 cut(s) 2528, 2844, 3233
AfaI GTAC 7 cut(s) 44, 153, 540, 1206, 2188, 2564, 3052
AfiI CCNNNNNNNGG 6 cut(s) 207, 309, 345, 497, 3247, 3248
AflII CTTAAG 1 cut(s) 2282
AflIII ACRYGT 4 cut(s) 254, 541, 2565, 2673
AjiI CACGTC 1 cut(s) 1735
AjnI CCWGG 5 cut(s) 480, 1538, 1738, 2832, 3310
AjuI GAANNNNNNNTTGG 6 cut(s) 803, 835, 1154, 1186, 3450, 3482
AleI CACNNNNGTG 1 cut(s) 1515
Alw21I GWGCWC 1 cut(s) 3423
AlwI GGATC 8 cut(s) 561, 603, 2155, 2219, 3042, 3110, 3487, 3566
AlwNI CAGNNNCTG 1 cut(s) 2509
Ama87I CYCGRG 2 cut(s) 3089, 3422
AoxI GGCC 2 cut(s) 1291, 2847
ApoI RAATTY 6 cut(s) 397, 930, 1077, 1263, 2464, 2488
ArsI GACNNNNNNTTYG 2 cut(s) 2246, 2278
Asp700I GAANNNNTTC 2 cut(s) 57, 1611
AspS9I GGNCC 6 cut(s) 220, 793, 1468, 2108, 2847, 2949
AsuC2I CCSGG 3 cut(s) 2526, 3556, 3608
AsuNHI GCTAGC 1 cut(s) 503
AvaI CYCGRG 2 cut(s) 3089, 3422
AvaII GGWCC 5 cut(s) 220, 793, 1468, 2108, 2949
BaeGI GKGCMC 1 cut(s) 1666
BanII GRGCYC 1 cut(s) 2609
BarI GAAGNNNNNNTAC 2 cut(s) 2910, 2942
BbsI GAAGAC 5 cut(s) 1737, 2283, 3180, 3229, 3344
Bbv12I GWGCWC 1 cut(s) 3423
BceAI ACGGC 2 cut(s) 621, 2018
BcgI CGANNNNNNTGC 2 cut(s) 2039, 2073
BciT130I CCWGG 5 cut(s) 482, 1540, 1740, 2834, 3312
BcnI CCSGG 3 cut(s) 2526, 3556, 3608
BfmI CTRYAG 3 cut(s) 295, 1650, 2991
BfrI CTTAAG 1 cut(s) 2282
BfuAI ACCTGC 3 cut(s) 538, 1187, 3312
BglII AGATCT 1 cut(s) 2985
BlpI GCTNAGC 1 cut(s) 2608
Bme1390I CCNGG 8 cut(s) 482, 1540, 1740, 2526, 2834, 3312, 3556, 3608
Bme18I GGWCC 5 cut(s) 220, 793, 1468, 2108, 2949
BmeT110I CYCGRG 2 cut(s) 3089, 3422
BmgBI CACGTC 1 cut(s) 1735
BmgT120I GGNCC 6 cut(s) 220, 793, 1468, 2108, 2847, 2949
BmiI GGNNCC 4 cut(s) 54, 1469, 1570, 2235
BmrFI CCNGG 8 cut(s) 482, 1540, 1740, 2526, 2834, 3312, 3556, 3608
BmrI ACTGGG 1 cut(s) 2612
BmsI GCATC 6 cut(s) 757, 910, 1093, 1525, 1687, 2641
BmtI GCTAGC 1 cut(s) 507
BmuI ACTGGG 1 cut(s) 2612
BpiI GAAGAC 5 cut(s) 1737, 2283, 3180, 3229, 3344
BplI GAGNNNNNCTC 4 cut(s) 2530, 2562, 2876, 2908
BpmI CTGGAG 3 cut(s) 1561, 2771, 2884
Bpu1102I GCTNAGC 1 cut(s) 2608
BpuEI CTTGAG 6 cut(s) 361, 1571, 1905, 2615, 3043, 3233
BpuMI CCSGG 3 cut(s) 2526, 3556, 3608
BsaAI YACGTR 1 cut(s) 1334
BsaHI GRCGYC 1 cut(s) 860
BsaI GGTCTC 1 cut(s) 2635
BsaJI CCNNGG 3 cut(s) 279, 2228, 3648
BsaWI WCCGGW 2 cut(s) 1304, 2110
Bsc4I CCNNNNNNNGG 6 cut(s) 207, 309, 345, 497, 3247, 3248
Bse118I RCCGGY 1 cut(s) 2401
Bse3DI GCAATG 1 cut(s) 103
BseBI CCWGG 5 cut(s) 482, 1540, 1740, 2834, 3312
BseDI CCNNGG 3 cut(s) 279, 2228, 3648
BseLI CCNNNNNNNGG 6 cut(s) 207, 309, 345, 497, 3247, 3248
BseMI GCAATG 1 cut(s) 103
BseMII CTCAG 7 cut(s) 198, 552, 758, 1025, 1694, 2142, 2622
BseRI GAGGAG 4 cut(s) 203, 499, 502, 821
BseSI GKGCMC 1 cut(s) 1666
BshFI GGCC 2 cut(s) 1293, 2849
BsiHKAI GWGCWC 1 cut(s) 3423
BsiHKCI CYCGRG 2 cut(s) 3089, 3422
BsiSI CCGG 6 cut(s) 1305, 2111, 2402, 2526, 3555, 3607
BslFI GGGAC 3 cut(s) 661, 1481, 2884
BslI CCNNNNNNNGG 6 cut(s) 207, 309, 345, 497, 3247, 3248
BsmBI CGTCTC 1 cut(s) 138
BsmFI GGGAC 3 cut(s) 661, 1481, 2884
BsmI GAATGC 1 cut(s) 2013
BsnI GGCC 2 cut(s) 1293, 2849
Bso31I GGTCTC 1 cut(s) 2635
BsoBI CYCGRG 2 cut(s) 3089, 3422
Bsp1286I GDGCHC 3 cut(s) 1666, 2609, 3423
Bsp1407I TGTACA 2 cut(s) 2186, 2562
Bsp1720I GCTNAGC 1 cut(s) 2608
BspACI CCGC 4 cut(s) 428, 2699, 2947, 3047
BspANI GGCC 2 cut(s) 1293, 2849
BspCNI CTCAG 7 cut(s) 197, 553, 757, 1024, 1695, 2143, 2621
BspHI TCATGA 1 cut(s) 2409
BspLI GGNNCC 4 cut(s) 54, 1469, 1570, 2235
BspMAI CTGCAG 1 cut(s) 299
BspMI ACCTGC 3 cut(s) 538, 1187, 3312
BspOI GCTAGC 1 cut(s) 507
BspPI GGATC 8 cut(s) 561, 603, 2155, 2219, 3042, 3110, 3487, 3566
BspTI CTTAAG 1 cut(s) 2282
BspTNI GGTCTC 1 cut(s) 2635
BsrDI GCAATG 1 cut(s) 103
BsrFI RCCGGY 1 cut(s) 2401
BsrGI TGTACA 2 cut(s) 2186, 2562
BssAI RCCGGY 1 cut(s) 2401
BssECI CCNNGG 3 cut(s) 279, 2228, 3648
BssNI GRCGYC 1 cut(s) 860
BssT1I CCWWGG 2 cut(s) 279, 3648
Bst2UI CCWGG 5 cut(s) 482, 1540, 1740, 2834, 3312
Bst4CI ACNGT 6 cut(s) 69, 815, 1654, 1998, 3143, 3179
Bst6I CTCTTC 5 cut(s) 265, 1857, 2046, 2675, 3098
BstACI GRCGYC 1 cut(s) 860
BstAFI CTTAAG 1 cut(s) 2282
BstAUI TGTACA 2 cut(s) 2186, 2562
BstBAI YACGTR 1 cut(s) 1334
BstC8I GCNNGC 6 cut(s) 505, 1295, 1723, 1799, 1803, 3317
BstDEI CTNAG 9 cut(s) 184, 561, 744, 870, 1011, 1703, 2151, 2608, 3512
BstDSI CCRYGG 1 cut(s) 2228
BstEII GGTNACC 1 cut(s) 3299
BstENI CCTNNNNNAGG 1 cut(s) 343
BstMWI GCNNNNNNNGC 5 cut(s) 362, 379, 636, 2248, 3580
BstNI CCWGG 5 cut(s) 482, 1540, 1740, 2834, 3312
BstNSI RCATGY 6 cut(s) 258, 294, 545, 1757, 2569, 2677
BstPI GGTNACC 1 cut(s) 3299
BstSCI CCNGG 8 cut(s) 480, 1538, 1738, 2524, 2832, 3310, 3554, 3606
BstSFI CTRYAG 3 cut(s) 295, 1650, 2991
BstSLI GKGCMC 1 cut(s) 1666
BstV2I GAAGAC 5 cut(s) 1737, 2283, 3180, 3229, 3344
BstX2I RGATCY 7 cut(s) 553, 595, 2147, 2224, 2985, 3034, 3115
BstXI CCANNNNNNTGG 2 cut(s) 1517, 2857
BstYI RGATCY 7 cut(s) 553, 595, 2147, 2224, 2985, 3034, 3115
BsuRI GGCC 2 cut(s) 1293, 2849
BtgI CCRYGG 1 cut(s) 2228
BtrI CACGTC 1 cut(s) 1735
BtsI GCAGTG 1 cut(s) 3423
BtsIMutI CAGTG 5 cut(s) 1106, 1700, 2003, 2174, 3423
BveI ACCTGC 3 cut(s) 538, 1187, 3312
Cac8I GCNNGC 6 cut(s) 505, 1295, 1723, 1799, 1803, 3317
CaiI CAGNNNCTG 1 cut(s) 2509
CciI TCATGA 1 cut(s) 2409
Cfr10I RCCGGY 1 cut(s) 2401
Cfr13I GGNCC 6 cut(s) 220, 793, 1468, 2108, 2847, 2949
CseI GACGC 3 cut(s) 554, 849, 1583
CsiI ACCWGGT 1 cut(s) 2832
Csp6I GTAC 7 cut(s) 43, 152, 539, 1205, 2187, 2563, 3051
CviQI GTAC 7 cut(s) 43, 152, 539, 1205, 2187, 2563, 3051
DdeI CTNAG 9 cut(s) 184, 561, 744, 870, 1011, 1703, 2151, 2608, 3512
DraIII CACNNNGTG 3 cut(s) 2528, 2844, 3233
DrdI GACNNNNNNGTC 1 cut(s) 2867
DseDI GACNNNNNNGTC 1 cut(s) 2867
Eam1104I CTCTTC 5 cut(s) 265, 1857, 2046, 2675, 3098
EarI CTCTTC 5 cut(s) 265, 1857, 2046, 2675, 3098
EciI GGCGGA 1 cut(s) 417
Eco130I CCWWGG 2 cut(s) 279, 3648
Eco147I AGGCCT 1 cut(s) 1293
Eco24I GRGCYC 1 cut(s) 2609
Eco31I GGTCTC 1 cut(s) 2635
Eco32I GATATC 2 cut(s) 898, 946
Eco47I GGWCC 5 cut(s) 220, 793, 1468, 2108, 2949
Eco57I CTGAAG 3 cut(s) 344, 2264, 3305
Eco88I CYCGRG 2 cut(s) 3089, 3422
Eco91I GGTNACC 1 cut(s) 3299
EcoNI CCTNNNNNAGG 1 cut(s) 343
EcoO65I GGTNACC 1 cut(s) 3299
EcoRI GAATTC 2 cut(s) 930, 1263
EcoRII CCWGG 5 cut(s) 480, 1538, 1738, 2832, 3310
EcoRV GATATC 2 cut(s) 898, 946
EcoT14I CCWWGG 2 cut(s) 279, 3648
EcoT22I ATGCAT 1 cut(s) 2013
EcoT38I GRGCYC 1 cut(s) 2609
ErhI CCWWGG 2 cut(s) 279, 3648
Esp3I CGTCTC 1 cut(s) 138
FalI AAGNNNNNCTT 2 cut(s) 584, 616
FaqI GGGAC 3 cut(s) 661, 1481, 2884
FauI CCCGC 1 cut(s) 3040
FblI GTMKAC 3 cut(s) 1789, 2670, 3541
FriOI GRGCYC 1 cut(s) 2609
GsuI CTGGAG 3 cut(s) 1561, 2771, 2884
HaeIII GGCC 2 cut(s) 1293, 2849
HapII CCGG 6 cut(s) 1305, 2111, 2402, 2526, 3555, 3607
HgaI GACGC 3 cut(s) 554, 849, 1583
Hin1I GRCGYC 1 cut(s) 860
HincII GTYRAC 3 cut(s) 1951, 2671, 2785
HindII GTYRAC 3 cut(s) 1951, 2671, 2785
HindIII AAGCTT 3 cut(s) 371, 380, 434
HpaII CCGG 6 cut(s) 1305, 2111, 2402, 2526, 3555, 3607
HpyCH4III ACNGT 6 cut(s) 69, 815, 1654, 1998, 3143, 3179
HpyCH4IV ACGT 2 cut(s) 1333, 1734
HpyF10VI GCNNNNNNNGC 5 cut(s) 362, 379, 636, 2248, 3580
HpyF3I CTNAG 9 cut(s) 184, 561, 744, 870, 1011, 1703, 2151, 2608, 3512
HpySE526I ACGT 2 cut(s) 1333, 1734
Hsp92I GRCGYC 1 cut(s) 860
LmnI GCTCC 3 cut(s) 305, 512, 2233
LweI GCATC 6 cut(s) 757, 910, 1093, 1525, 1687, 2641
MabI ACCWGGT 1 cut(s) 2832
MaeII ACGT 2 cut(s) 1333, 1734
MfeI CAATTG 3 cut(s) 924, 2623, 2636
MflI RGATCY 7 cut(s) 553, 595, 2147, 2224, 2985, 3034, 3115
MhlI GDGCHC 3 cut(s) 1666, 2609, 3423
MlyI GAGTC 6 cut(s) 1003, 1079, 2087, 2679, 2877, 3434
MmeI TCCRAC 4 cut(s) 7, 198, 1636, 3507
Mph1103I ATGCAT 1 cut(s) 2013
MroXI GAANNNNTTC 2 cut(s) 57, 1611
MslI CAYNNNNRTG 2 cut(s) 1515, 1758
MspCI CTTAAG 1 cut(s) 2282
MspI CCGG 6 cut(s) 1305, 2111, 2402, 2526, 3555, 3607
MspR9I CCNGG 8 cut(s) 482, 1540, 1740, 2526, 2834, 3312, 3556, 3608
MunI CAATTG 3 cut(s) 924, 2623, 2636
Mva1269I GAATGC 1 cut(s) 2013
MvaI CCWGG 5 cut(s) 482, 1540, 1740, 2834, 3312
MwoI GCNNNNNNNGC 5 cut(s) 362, 379, 636, 2248, 3580
NciI CCSGG 3 cut(s) 2526, 3556, 3608
NheI GCTAGC 1 cut(s) 503
NlaIV GGNNCC 4 cut(s) 54, 1469, 1570, 2235
NmuCI GTSAC 5 cut(s) 121, 2836, 3159, 3299, 3630
NsiI ATGCAT 1 cut(s) 2013
NspI RCATGY 6 cut(s) 258, 294, 545, 1757, 2569, 2677
OliI CACNNNNGTG 1 cut(s) 1515
PaeR7I CTCGAG 2 cut(s) 3089, 3422
PagI TCATGA 1 cut(s) 2409
PaqCI CACCTGC 1 cut(s) 1187
PceI AGGCCT 1 cut(s) 1293
PciI ACATGT 4 cut(s) 254, 541, 2565, 2673
PcsI WCGNNNNNNNCGW 1 cut(s) 2652
PctI GAATGC 1 cut(s) 2013
PdmI GAANNNNTTC 2 cut(s) 57, 1611
PflFI GACNNNGTC 2 cut(s) 1382, 2834
PflMI CCANNNNNTGG 1 cut(s) 309
PleI GAGTC 6 cut(s) 1003, 1078, 2086, 2679, 2876, 3433
PpsI GAGTC 6 cut(s) 1003, 1078, 2086, 2679, 2876, 3433
Ppu21I YACGTR 1 cut(s) 1334
PscI ACATGT 4 cut(s) 254, 541, 2565, 2673
PsiI TTATAA 1 cut(s) 2811
Psp6I CCWGG 5 cut(s) 480, 1538, 1738, 2832, 3310
PspEI GGTNACC 1 cut(s) 3299
PspGI CCWGG 5 cut(s) 480, 1538, 1738, 2832, 3310
PspN4I GGNNCC 4 cut(s) 54, 1469, 1570, 2235
PspPI GGNCC 6 cut(s) 220, 793, 1468, 2108, 2847, 2949
PspXI VCTCGAGB 2 cut(s) 3089, 3422
PstI CTGCAG 1 cut(s) 299
PstNI CAGNNNCTG 1 cut(s) 2509
PsuI RGATCY 7 cut(s) 553, 595, 2147, 2224, 2985, 3034, 3115
PsyI GACNNNGTC 2 cut(s) 1382, 2834
RsaI GTAC 7 cut(s) 44, 153, 540, 1206, 2188, 2564, 3052
RsaNI GTAC 7 cut(s) 43, 152, 539, 1205, 2187, 2563, 3051
RseI CAYNNNNRTG 2 cut(s) 1515, 1758
SalI GTCGAC 1 cut(s) 2669
Sau96I GGNCC 6 cut(s) 220, 793, 1468, 2108, 2847, 2949
SchI GAGTC 6 cut(s) 1003, 1079, 2087, 2679, 2877, 3434
ScrFI CCNGG 8 cut(s) 482, 1540, 1740, 2526, 2834, 3312, 3556, 3608
SduI GDGCHC 3 cut(s) 1666, 2609, 3423
SexAI ACCWGGT 1 cut(s) 2832
SfaNI GCATC 6 cut(s) 757, 910, 1093, 1525, 1687, 2641
SfcI CTRYAG 3 cut(s) 295, 1650, 2991
Sfr274I CTCGAG 2 cut(s) 3089, 3422
SinI GGWCC 5 cut(s) 220, 793, 1468, 2108, 2949
SlaI CTCGAG 2 cut(s) 3089, 3422
SmiMI CAYNNNNRTG 2 cut(s) 1515, 1758
SmlI CTYRAG 9 cut(s) 340, 1586, 1920, 2282, 2594, 3022, 3089, 3212, 3422
SmoI CTYRAG 9 cut(s) 340, 1586, 1920, 2282, 2594, 3022, 3089, 3212, 3422
SseBI AGGCCT 1 cut(s) 1293
SsiI CCGC 4 cut(s) 428, 2699, 2947, 3047
SspI AATATT 2 cut(s) 1374, 2338
StuI AGGCCT 1 cut(s) 1293
StyD4I CCNGG 8 cut(s) 480, 1538, 1738, 2524, 2832, 3310, 3554, 3606
StyI CCWWGG 2 cut(s) 279, 3648
TaaI ACNGT 6 cut(s) 69, 815, 1654, 1998, 3143, 3179
TaiI ACGT 2 cut(s) 1336, 1737
TaqII GACCGA 1 cut(s) 237
TatI WGTACW 5 cut(s) 42, 538, 1204, 2186, 2562
TscAI CASTG 5 cut(s) 1113, 1707, 2003, 2181, 3423
TseFI GTSAC 5 cut(s) 121, 2836, 3159, 3299, 3630
Tsp45I GTSAC 5 cut(s) 121, 2836, 3159, 3299, 3630
TspGWI ACGGA 2 cut(s) 2217, 3442
TspRI CASTG 5 cut(s) 1113, 1707, 2003, 2181, 3423
Tth111I GACNNNGTC 2 cut(s) 1382, 2834
Van91I CCANNNNNTGG 1 cut(s) 309
Vha464I CTTAAG 1 cut(s) 2282
VpaK11BI GGWCC 5 cut(s) 220, 793, 1468, 2108, 2949
XagI CCTNNNNNAGG 1 cut(s) 343
XapI RAATTY 6 cut(s) 397, 930, 1077, 1263, 2464, 2488
XbaI TCTAGA 3 cut(s) 3037, 3187, 3392
XceI RCATGY 6 cut(s) 258, 294, 545, 1757, 2569, 2677
XcmI CCANNNNNNNNNTGG 1 cut(s) 478
XhoI CTCGAG 2 cut(s) 3089, 3422
XmiI GTMKAC 3 cut(s) 1789, 2670, 3541
XmnI GAANNNNTTC 2 cut(s) 57, 1611
Zsp2I ATGCAT 1 cut(s) 2013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.