Rmu_sc0001700.1_g000032

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001700.1
OG0000203
Physical Location & Seq
Reverse (-)
150885 .. 155396
4512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001700.1_g000032.1.cds

Sequence Viewer

Length: 4431 bp
atggcagaaatatgtatttcagttgttgcaaaattagcggagtacacagtcaaacctgttctgcgacagtttggttatctgattaactacaagagaaatgttcaagatctcaccgagaaggttacaactctgacatccaaaagagatggggtacaacgacgtgtaaatgcagcaaagaggaatttggaggatattcttcctcttgttgacaactggttggaacgagtaaagcagaccatagaagaaaaggagacatgttttgaagaaggaagagtagccagcgcaacaacatgctgcagctccaatgggtggtgtccaaatctgaaggtccgccattccttgagtaggacagcaacgaagctggctccaaaggtagatgtcctccttacagaaggagctttcgggacgatatcatatcctgcttctgcgcagaagattgattatccagtcatgcaatattgtgaggattccactgagtcaccggcgaagccccatgaaggggctagctcctcctcaggaacatccgatcctgctaagccacctgcacctacggatctctctgagcgtctgaaatataggttgccttatacaaaggatctcttgacggctctgcaagatgacaagatcagcatgatcggcatttctgggacaatcagagagatagatacagtaacaactaaagagttcatgaaaagaatgaaacagaaaaagctctttaaagaggttgcgatggcagttgtgtcccagggtccagacttgaaacgaatacaaggtgaaattgcagaaatgctagacctgaaattggagaatgggagttcggttgaacgggcagagaggctacgtgctgtatcattggcatccgattctaagaggattcttgtaatactgactgatgtctgtgaagtacctgatttggatgcaattggaatttctcatgttgatatcaagaaaagctgcaagatcatgttgatttcacaactatcaaacgtgtttggtgaaatggggactcagagcaatttcaaattgttattacaatacactcccagagcaagacccgttgagtttgaatcaagaatttcaatcatcagagatgtaatggatgctctgacagacgatgaatccaaccccattgtaatctgtggcatggggggaattggcaaaacaaccttggtgatggaaattggtgcaaaagcgagtgaagtagatctatttgatgatgttgctattgcagagtttactcaagaacccgacttgatcaaaatccaaggtaaaattgctaatgctctaggtctggaacttaaagcagaggatgatagagcagccaagttacgagaaagattatcaatgggtatcaaaaaggtccttataatattggacaatgtttggacacatctaaatttgtgggaaatagggattccaatttcccgtgatccaaaatgttgtaaacttctagtatcatcacggaaccaagatatcttcaaagagatgaaaaccaaaagaaatttcctcattgctggtttgtcaaagcatgatgcttggagtttgtttaagaaggtagcaggagggtccatagaatttgatctcgagctgtgtcctatagcaaaacaggttctggatgaatgtgatggcttaccagttgcaatttctacagttggaggggcactacaaggtgaaagcattccaaaatggagaaatgcacttagacaactaagacaggcttgcccagaagacgttccaggagtcatagagcatgtgtacggaaaaatagcgttcagctttgaatgtctaccaagcgagcaagccaaatcatgttttttgctatgttgtgcatttccagaaagtgaagagtttccaattgaatggttggttatgtttgggattgggcttggactttttaaagacattgattcaatatctgaagcaagggactacttaacaacattggttgacacactcaaaaatcgttctttgttgttagaggacgatgagaaagattatgttagaatgcatgatgtggtgcgtgatgtagccgtgtatatagcctccaaagagttggcacaaaagaagagtgataagcttgaaaggagatttatgtgtagagaaggagtggtattgacccattggctcaagagaagttcattgacagtcgatatgagtactactgagcttttagtgttggcgtccacagatggaattgaactggagctgccagccacaattttcgatggaatggaaaatctcaaggttttaggaatcgggaattcaatcctcccatccctttcacttctgaagaatcttcaaacactcattctaatggattgctgttgcaatattgatgtcattggagagctacggtcactcatgatactctatttccttgaatgtgatgacgtcaaacagttgcctgatacattcaaaaatttatctaatctgaggttgttaaacttgacaggatgtacagagcttaaagtaatctcaccaggtgttatatcgagtttatctcgtctagaagaattgtacatggggaatggctttaaagattgggtggttgagaaactgggctcaacagaaacaatcaattggatctctcaattgaaggttgatgcccaaccagaagaagtcaacatgtggaagaaattcaacaggttggcggttgagaaactagcctcaacagaaacaacaactgattgggtctctcaacgggaggaggatgaggaaagaagtgaaccagaggaactcgccgaccttggagatctgttcgcagagtatgttacagatttagaaggaaactacgaccatctcacaagttgggccaactctatggactggagagttggattactttcagagctactttccttgtcccgtttgactactttagaagtggttttacctccaattgagattctgcgaaccagcaagctatttcataagcttgaaagatttaagatctctattggatgggatgagcatgacgacttggaggacgtaaagggtaactacttgagagttcatgatcttgaagcaagctctgttgtggatactggaatcggtttgttgttaaagaaaactaccaagcttgaattaaaaatgaagaatttgactgaccctctcaatgtcatagatgtaaactgctgtgcaaacttggagtcacttatcctcaaagactgtgatgctctggaatatttgattgacatgacttttaagcaagatactccacaaagcgtctttcctgtcttgaattatctgaaaatcgatggagcaagaaggctgaaagtgatttttcatggtgagctgccactgggatctcttcagaaactagaaaggctatatttatggaatctacctgcattgacgactatttggactattggaagccaatctagatgtaatggaatggagaagcttatgcgcctccgggacaccctaccagctggcctacattttccaatgttggaaattctagaggtgaagttttgtggattgaagaatatgtcttcattatccttccagaatctaacaagtttagaagtaaccttttgctggagattgcaatacttgacaacttattcggtagctggaagtttaaagcaactcaaaatactgaaagttgatgaatgtaaaagtatgaaacaaatcttggcaagtgaaggaatcggagaagatgacagtaattgtgagattttattcgaacagttgcaacatttggaactcagtgatttaataagtttggaacgcttttgctcaaacaattgcactgtgaaggttccaaaattgggaacttcagaagtaaattggtgctcaatcaaattgaaggtttcctctggtatactggaagtcgattcgaatatgcatctggatgtacaaaagtcacattctagtaaacaggctttcaataccattgagtctgcttctagctcggaaaaaaatcagaaacatcctgccacaaatgcctctgaaggagctgaacatattgagttcaatgcacgggaactccatgatgacagccctacagatgagctgaacaaacaccggcctctattgcctgctggcattgccaaaagtgaacatggagttgaaggtgtgattcaagaaactcctatcaattcgcaaaacatggagcatcatgaggttatgggcctaaatccgaagcaaatcgtcaccaatacttcaaagaatattcaggaggctgattttggcatgcaagagaccctcattgaacctttgaacgcaaatgaaggtaagcagcttcaattgaaacaacttgatggtgcgcaaactgattcatggtcgcaaagcatgtcgaagcttgatgctgaaatccgacatttggaggaagaattaagggccaaaaaagcagagaggagagatggacttcagccgcagagagagagaggtagaaagagcctgagaagatgcacatctttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1476

Amino Acids

165.75

Weight (kDa)

5.32

Isoelectric Point (pI)

43.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1367
AarI CACCTGC 1 cut(s) 550
AatII GACGTC 1 cut(s) 2394
Acc16I TGCGCA 2 cut(s) 429, 4275
Acc36I ACCTGC 2 cut(s) 550, 3355
AccB7I CCANNNNNTGG 1 cut(s) 309
AccI GTMKAC 2 cut(s) 1786, 3829
AciI CCGC 4 cut(s) 38, 331, 2651, 4382
AclWI GGATC 6 cut(s) 521, 561, 603, 1424, 2591, 3313
AcuI CTGAAG 7 cut(s) 344, 1938, 2309, 3296, 3768, 3978, 4361
AcyI GRCGYC 2 cut(s) 2180, 2391
AdeI CACNNNGTG 1 cut(s) 2483
AfaI GTAC 8 cut(s) 44, 153, 906, 1757, 2158, 2458, 2519, 3864
AfiI CCNNNNNNNGG 9 cut(s) 309, 345, 497, 498, 499, 802, 3543, 3776, 4330
AflIII ACRYGT 4 cut(s) 160, 254, 987, 2625
AjiI CACGTC 1 cut(s) 161
AjnI CCWGG 3 cut(s) 744, 1735, 2479
AjuI GAANNNNNNNTTGG 4 cut(s) 1487, 1519, 3623, 3655
AloI GAACNNNNNNTCC 2 cut(s) 511, 543
Alw21I GWGCWC 1 cut(s) 3803
Alw26I GTCTC 3 cut(s) 245, 2698, 4202
AlwI GGATC 6 cut(s) 521, 561, 603, 1424, 2591, 3313
AlwNI CAGNNNCTG 1 cut(s) 1612
Ama87I CYCGRG 1 cut(s) 1583
AoxI GGCC 5 cut(s) 2811, 3436, 4034, 4138, 4347
ApeKI GCWGC 8 cut(s) 170, 294, 297, 954, 1319, 2206, 3295, 4246
ArsI GACNNNNNNTTYG 4 cut(s) 3134, 3166, 3553, 3585
Asp700I GAANNNNTTC 4 cut(s) 1677, 1731, 1848, 2636
AspLEI GCGC 4 cut(s) 284, 430, 3414, 4276
AspS9I GGNCC 7 cut(s) 328, 749, 1360, 1566, 2811, 4138, 4347
AsuC2I CCSGG 1 cut(s) 3419
AsuII TTCGAA 2 cut(s) 3690, 3845
AsuNHI GCTAGC 1 cut(s) 503
AvaI CYCGRG 1 cut(s) 1583
AvaII GGWCC 4 cut(s) 328, 749, 1360, 1566
AxyI CCTNAGG 1 cut(s) 514
BaeGI GKGCMC 1 cut(s) 1663
BanII GRGCYC 1 cut(s) 2564
BarI GAAGNNNNNNTAC 2 cut(s) 2874, 2906
BbsI GAAGAC 2 cut(s) 1734, 3489
Bbv12I GWGCWC 1 cut(s) 3803
BbvI GCAGC 8 cut(s) 182, 281, 309, 941, 1331, 2193, 3282, 4258
BceAI ACGGC 2 cut(s) 621, 2015
BciT130I CCWGG 3 cut(s) 746, 1737, 2481
BciVI GTATCC 1 cut(s) 3034
BclI TGATCA 1 cut(s) 1254
BcnI CCSGG 1 cut(s) 3419
BcoDI GTCTC 3 cut(s) 245, 2698, 4202
BfmI CTRYAG 4 cut(s) 295, 1596, 1647, 4011
BfuAI ACCTGC 2 cut(s) 550, 3355
BfuI GTATCC 1 cut(s) 3034
BglII AGATCT 4 cut(s) 106, 1204, 2752, 2949
BisI GCNGC 9 cut(s) 171, 295, 298, 955, 1320, 2207, 3296, 4247, 4382
BlpI GCTNAGC 1 cut(s) 534
BlsI GCNGC 9 cut(s) 172, 296, 299, 956, 1321, 2208, 3297, 4248, 4383
BmcAI AGTACT 1 cut(s) 2158
Bme1390I CCNGG 4 cut(s) 746, 1737, 2481, 3419
Bme18I GGWCC 4 cut(s) 328, 749, 1360, 1566
BmeT110I CYCGRG 1 cut(s) 1583
BmgBI CACGTC 1 cut(s) 161
BmgT120I GGNCC 7 cut(s) 328, 749, 1360, 1566, 2811, 4138, 4347
BmiI GGNNCC 5 cut(s) 366, 750, 1466, 1567, 3768
BmrFI CCNGG 4 cut(s) 746, 1737, 2481, 3419
BmrI ACTGGG 2 cut(s) 2567, 3311
BmtI GCTAGC 1 cut(s) 507
BmuI ACTGGG 2 cut(s) 2567, 3311
BoxI GACNNNNGTC 1 cut(s) 893
BpiI GAAGAC 2 cut(s) 1734, 3489
BplI GAGNNNNNCTC 2 cut(s) 2485, 2517
BpmI CTGGAG 3 cut(s) 2222, 2848, 3565
Bpu1102I GCTNAGC 1 cut(s) 534
Bpu14I TTCGAA 2 cut(s) 3690, 3845
BpuEI CTTGAG 5 cut(s) 361, 1224, 2111, 2225, 3025
BpuMI CCSGG 1 cut(s) 3419
Bsa29I ATCGAT 1 cut(s) 3255
BsaAI YACGTR 1 cut(s) 842
BsaBI GATNNNNATC 2 cut(s) 1259, 4420
BsaHI GRCGYC 2 cut(s) 2180, 2391
BsaI GGTCTC 2 cut(s) 2698, 4202
BsaJI CCNNGG 5 cut(s) 744, 745, 1167, 1264, 2746
BsaXI ACNNNNNCTCC 2 cut(s) 3978, 4008
Bsc4I CCNNNNNNNGG 9 cut(s) 309, 345, 497, 498, 499, 802, 3543, 3776, 4330
Bse118I RCCGGY 2 cut(s) 481, 4032
Bse1I ACTGG 9 cut(s) 218, 446, 1634, 2205, 2562, 2831, 3049, 3306, 3837
Bse21I CCTNAGG 1 cut(s) 514
Bse3DI GCAATG 2 cut(s) 1509, 4053
Bse8I GATNNNNATC 2 cut(s) 1259, 4420
BseBI CCWGG 3 cut(s) 746, 1737, 2481
BseCI ATCGAT 1 cut(s) 3255
BseDI CCNNGG 5 cut(s) 744, 745, 1167, 1264, 2746
BseJI GATNNNNATC 2 cut(s) 1259, 4420
BseLI CCNNNNNNNGG 9 cut(s) 309, 345, 497, 498, 499, 802, 3543, 3776, 4330
BseMI GCAATG 2 cut(s) 1509, 4053
BseMII CTCAG 8 cut(s) 465, 528, 552, 1022, 2154, 2423, 3727, 4400
BseNI ACTGG 9 cut(s) 218, 446, 1634, 2205, 2562, 2831, 3049, 3306, 3837
BseRI GAGGAG 4 cut(s) 499, 502, 2720, 4378
BseSI GKGCMC 1 cut(s) 1663
BseXI GCAGC 8 cut(s) 182, 281, 309, 941, 1331, 2193, 3282, 4258
BsgI GTGCAG 1 cut(s) 528
BshFI GGCC 5 cut(s) 2813, 3438, 4036, 4140, 4349
BshVI ATCGAT 1 cut(s) 3255
BsiHKAI GWGCWC 1 cut(s) 3803
BsiHKCI CYCGRG 1 cut(s) 1583
BsiSI CCGG 3 cut(s) 482, 3418, 4033
BslFI GGGAC 7 cut(s) 418, 661, 727, 1018, 1940, 2848, 3434
BslI CCNNNNNNNGG 9 cut(s) 309, 345, 497, 498, 499, 802, 3543, 3776, 4330
BsmAI GTCTC 3 cut(s) 245, 2698, 4202
BsmFI GGGAC 7 cut(s) 418, 661, 727, 1018, 1940, 2848, 3434
BsmI GAATGC 2 cut(s) 1677, 2010
BsnI GGCC 5 cut(s) 2813, 3438, 4036, 4140, 4349
Bso31I GGTCTC 2 cut(s) 2698, 4202
BsoBI CYCGRG 1 cut(s) 1583
Bsp119I TTCGAA 2 cut(s) 3690, 3845
Bsp1286I GDGCHC 3 cut(s) 1663, 2564, 3803
Bsp1407I TGTACA 3 cut(s) 2456, 2517, 3862
Bsp1720I GCTNAGC 1 cut(s) 534
BspACI CCGC 4 cut(s) 38, 331, 2651, 4382
BspANI GGCC 5 cut(s) 2813, 3438, 4036, 4140, 4349
BspCNI CTCAG 8 cut(s) 466, 527, 553, 1021, 2155, 2424, 3726, 4401
BspDI ATCGAT 1 cut(s) 3255
BspHI TCATGA 4 cut(s) 687, 2361, 3013, 4126
BspLI GGNNCC 5 cut(s) 366, 750, 1466, 1567, 3768
BspMAI CTGCAG 1 cut(s) 299
BspMI ACCTGC 2 cut(s) 550, 3355
BspOI GCTAGC 1 cut(s) 507
BspPI GGATC 6 cut(s) 521, 561, 603, 1424, 2591, 3313
BspT104I TTCGAA 2 cut(s) 3690, 3845
BspTNI GGTCTC 2 cut(s) 2698, 4202
BsrDI GCAATG 2 cut(s) 1509, 4053
BsrFI RCCGGY 2 cut(s) 481, 4032
BsrGI TGTACA 3 cut(s) 2456, 2517, 3862
BsrI ACTGG 9 cut(s) 218, 446, 1634, 2205, 2562, 2831, 3049, 3306, 3837
BssAI RCCGGY 2 cut(s) 481, 4032
BssECI CCNNGG 5 cut(s) 744, 745, 1167, 1264, 2746
BssNAI GTATAC 1 cut(s) 3830
BssNI GRCGYC 2 cut(s) 2180, 2391
BssT1I CCWWGG 3 cut(s) 1167, 1264, 2746
Bst1107I GTATAC 1 cut(s) 3830
Bst2UI CCWGG 3 cut(s) 746, 1737, 2481
Bst6I CTCTTC 4 cut(s) 265, 1839, 2060, 3315
BstACI GRCGYC 2 cut(s) 2180, 2391
BstAUI TGTACA 3 cut(s) 2456, 2517, 3862
BstBAI YACGTR 1 cut(s) 842
BstBI TTCGAA 2 cut(s) 3690, 3845
BstENI CCTNNNNNAGG 1 cut(s) 343
BstHHI GCGC 4 cut(s) 284, 430, 3414, 4276
BstMAI GTCTC 3 cut(s) 245, 2698, 4202
BstMWI GCNNNNNNNGC 6 cut(s) 35, 636, 3950, 4042, 4055, 4355
BstNI CCWGG 3 cut(s) 746, 1737, 2481
BstNSI RCATGY 6 cut(s) 258, 294, 1754, 2629, 4204, 4303
BstPAI GACNNNNGTC 1 cut(s) 893
BstSCI CCNGG 4 cut(s) 744, 1735, 2479, 3417
BstSFI CTRYAG 4 cut(s) 295, 1596, 1647, 4011
BstSLI GKGCMC 1 cut(s) 1663
BstV1I GCAGC 8 cut(s) 182, 281, 309, 941, 1331, 2193, 3282, 4258
BstV2I GAAGAC 2 cut(s) 1734, 3489
BstX2I RGATCY 8 cut(s) 106, 553, 595, 1204, 2583, 2752, 2949, 3305
BstXI CCANNNNNNTGG 3 cut(s) 1860, 2053, 2821
BstYI RGATCY 8 cut(s) 106, 553, 595, 1204, 2583, 2752, 2949, 3305
BstZ17I GTATAC 1 cut(s) 3830
Bsu15I ATCGAT 1 cut(s) 3255
Bsu36I CCTNAGG 1 cut(s) 514
BsuI GTATCC 1 cut(s) 3034
BsuRI GGCC 5 cut(s) 2813, 3438, 4036, 4140, 4349
BsuTUI ATCGAT 1 cut(s) 3255
BtgZI GCGATG 1 cut(s) 743
BtrI CACGTC 1 cut(s) 161
BtsIMutI CAGTG 4 cut(s) 471, 3299, 3721, 3756
BveI ACCTGC 2 cut(s) 550, 3355
CaiI CAGNNNCTG 1 cut(s) 1612
CciI TCATGA 4 cut(s) 687, 2361, 3013, 4126
CfoI GCGC 4 cut(s) 284, 430, 3414, 4276
Cfr10I RCCGGY 2 cut(s) 481, 4032
Cfr13I GGNCC 7 cut(s) 328, 749, 1360, 1566, 2811, 4138, 4347
ClaI ATCGAT 1 cut(s) 3255
CseI GACGC 3 cut(s) 554, 2169, 3214
CsiI ACCWGGT 1 cut(s) 2479
Csp6I GTAC 8 cut(s) 43, 152, 905, 1756, 2157, 2457, 2518, 3863
CviQI GTAC 8 cut(s) 43, 152, 905, 1756, 2157, 2457, 2518, 3863
DraI TTTAAA 4 cut(s) 718, 1897, 2536, 3588
DraIII CACNNNGTG 1 cut(s) 2483
Eam1104I CTCTTC 4 cut(s) 265, 1839, 2060, 3315
EarI CTCTTC 4 cut(s) 265, 1839, 2060, 3315
EciI GGCGGA 1 cut(s) 320
Eco130I CCWWGG 3 cut(s) 1167, 1264, 2746
Eco24I GRGCYC 1 cut(s) 2564
Eco31I GGTCTC 2 cut(s) 2698, 4202
Eco32I GATATC 3 cut(s) 411, 943, 1474
Eco47I GGWCC 4 cut(s) 328, 749, 1360, 1566
Eco57I CTGAAG 7 cut(s) 344, 1938, 2309, 3296, 3768, 3978, 4361
Eco81I CCTNAGG 1 cut(s) 514
Eco88I CYCGRG 1 cut(s) 1583
EcoNI CCTNNNNNAGG 1 cut(s) 343
EcoO109I RGGNCCY 1 cut(s) 1360
EcoRI GAATTC 1 cut(s) 2260
EcoRII CCWGG 3 cut(s) 744, 1735, 2479
EcoRV GATATC 3 cut(s) 411, 943, 1474
EcoT14I CCWWGG 3 cut(s) 1167, 1264, 2746
EcoT22I ATGCAT 2 cut(s) 2010, 3855
EcoT38I GRGCYC 1 cut(s) 2564
ErhI CCWWGG 3 cut(s) 1167, 1264, 2746
FalI AAGNNNNNCTT 4 cut(s) 584, 616, 1702, 1734
FaqI GGGAC 7 cut(s) 418, 661, 727, 1018, 1940, 2848, 3434
FbaI TGATCA 1 cut(s) 1254
FblI GTMKAC 2 cut(s) 1786, 3829
Fnu4HI GCNGC 9 cut(s) 171, 295, 298, 955, 1320, 2207, 3296, 4247, 4382
FriOI GRGCYC 1 cut(s) 2564
Fsp4HI GCNGC 9 cut(s) 171, 295, 298, 955, 1320, 2207, 3296, 4247, 4382
FspI TGCGCA 2 cut(s) 429, 4275
GlaI GCGC 4 cut(s) 283, 429, 3413, 4275
GluI GCNGC 9 cut(s) 171, 295, 298, 955, 1320, 2207, 3296, 4247, 4382
GsuI CTGGAG 3 cut(s) 2222, 2848, 3565
HaeIII GGCC 5 cut(s) 2813, 3438, 4036, 4140, 4349
HapII CCGG 3 cut(s) 482, 3418, 4033
HgaI GACGC 3 cut(s) 554, 2169, 3214
HhaI GCGC 4 cut(s) 284, 430, 3414, 4276
Hin1I GRCGYC 2 cut(s) 2180, 2391
Hin6I GCGC 4 cut(s) 282, 428, 3412, 4274
HinP1I GCGC 4 cut(s) 282, 428, 3412, 4274
HincII GTYRAC 3 cut(s) 208, 1948, 2623
HindII GTYRAC 3 cut(s) 208, 1948, 2623
HindIII AAGCTT 5 cut(s) 2075, 2933, 3077, 3404, 4307
HpaII CCGG 3 cut(s) 482, 3418, 4033
Hpy99I CGWCG 1 cut(s) 162
HpyCH4IV ACGT 6 cut(s) 160, 841, 987, 1731, 2391, 2988
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 636, 3950, 4042, 4055, 4355
HpySE526I ACGT 6 cut(s) 160, 841, 987, 1731, 2391, 2988
Hsp92I GRCGYC 2 cut(s) 2180, 2391
HspAI GCGC 4 cut(s) 282, 428, 3412, 4274
Ksp22I TGATCA 1 cut(s) 1254
LmnI GCTCC 8 cut(s) 305, 370, 395, 512, 2203, 3260, 3962, 4120
Lsp1109I GCAGC 8 cut(s) 182, 281, 309, 941, 1331, 2193, 3282, 4258
MabI ACCWGGT 1 cut(s) 2479
MaeII ACGT 6 cut(s) 160, 841, 987, 1731, 2391, 2988
MfeI CAATTG 7 cut(s) 921, 1854, 2578, 2591, 2898, 3751, 4253
MflI RGATCY 8 cut(s) 106, 553, 595, 1204, 2583, 2752, 2949, 3305
MhlI GDGCHC 3 cut(s) 1663, 2564, 3803
MlyI GAGTC 5 cut(s) 485, 1000, 1749, 3158, 3914
MmeI TCCRAC 6 cut(s) 198, 1146, 1633, 2815, 3435, 4348
Mph1103I ATGCAT 2 cut(s) 2010, 3855
MroXI GAANNNNTTC 4 cut(s) 1677, 1731, 1848, 2636
MslI CAYNNNNRTG 2 cut(s) 2312, 3858
MspA1I CMGCKG 1 cut(s) 3434
MspI CCGG 3 cut(s) 482, 3418, 4033
MspR9I CCNGG 4 cut(s) 746, 1737, 2481, 3419
MunI CAATTG 7 cut(s) 921, 1854, 2578, 2591, 2898, 3751, 4253
Mva1269I GAATGC 2 cut(s) 1677, 2010
MvaI CCWGG 3 cut(s) 746, 1737, 2481
MwoI GCNNNNNNNGC 6 cut(s) 35, 636, 3950, 4042, 4055, 4355
NciI CCSGG 1 cut(s) 3419
NheI GCTAGC 1 cut(s) 503
NlaIV GGNNCC 5 cut(s) 366, 750, 1466, 1567, 3768
NmuCI GTSAC 5 cut(s) 477, 2355, 3150, 3870, 4159
NsbI TGCGCA 2 cut(s) 429, 4275
NsiI ATGCAT 2 cut(s) 2010, 3855
NspI RCATGY 6 cut(s) 258, 294, 1754, 2629, 4204, 4303
NspV TTCGAA 2 cut(s) 3690, 3845
PaeI GCATGC 1 cut(s) 4204
PaeR7I CTCGAG 1 cut(s) 1583
PagI TCATGA 4 cut(s) 687, 2361, 3013, 4126
PaqCI CACCTGC 1 cut(s) 550
PasI CCCWGGG 1 cut(s) 745
PciI ACATGT 2 cut(s) 254, 2625
PctI GAATGC 2 cut(s) 1677, 2010
PdmI GAANNNNTTC 4 cut(s) 1677, 1731, 1848, 2636
PflMI CCANNNNNTGG 1 cut(s) 309
PfoI TCCNGGA 2 cut(s) 1735, 3417
PkrI GCNGC 9 cut(s) 172, 296, 299, 956, 1321, 2208, 3297, 4248, 4383
PleI GAGTC 5 cut(s) 484, 1000, 1748, 3157, 3913
PpsI GAGTC 5 cut(s) 484, 1000, 1748, 3157, 3913
Ppu21I YACGTR 1 cut(s) 842
PpuMI RGGWCCY 1 cut(s) 1360
PscI ACATGT 2 cut(s) 254, 2625
PshAI GACNNNNGTC 1 cut(s) 893
PsiI TTATAA 1 cut(s) 1367
Psp5II RGGWCCY 1 cut(s) 1360
Psp6I CCWGG 3 cut(s) 744, 1735, 2479
PspGI CCWGG 3 cut(s) 744, 1735, 2479
PspN4I GGNNCC 5 cut(s) 366, 750, 1466, 1567, 3768
PspPI GGNCC 7 cut(s) 328, 749, 1360, 1566, 2811, 4138, 4347
PspPPI RGGWCCY 1 cut(s) 1360
PstI CTGCAG 1 cut(s) 299
PstNI CAGNNNCTG 1 cut(s) 1612
PsuI RGATCY 8 cut(s) 106, 553, 595, 1204, 2583, 2752, 2949, 3305
PvuII CAGCTG 1 cut(s) 3434
RsaI GTAC 8 cut(s) 44, 153, 906, 1757, 2158, 2458, 2519, 3864
RsaNI GTAC 8 cut(s) 43, 152, 905, 1756, 2157, 2457, 2518, 3863
RseI CAYNNNNRTG 2 cut(s) 2312, 3858
SatI GCNGC 9 cut(s) 171, 295, 298, 955, 1320, 2207, 3296, 4247, 4382
Sau96I GGNCC 7 cut(s) 328, 749, 1360, 1566, 2811, 4138, 4347
ScaI AGTACT 1 cut(s) 2158
SchI GAGTC 5 cut(s) 485, 1000, 1749, 3158, 3914
ScrFI CCNGG 4 cut(s) 746, 1737, 2481, 3419
SduI GDGCHC 3 cut(s) 1663, 2564, 3803
SexAI ACCWGGT 1 cut(s) 2479
SfcI CTRYAG 4 cut(s) 295, 1596, 1647, 4011
Sfr274I CTCGAG 1 cut(s) 1583
SfuI TTCGAA 2 cut(s) 3690, 3845
SgrAI CRCCGGYG 1 cut(s) 481
SinI GGWCC 4 cut(s) 328, 749, 1360, 1566
SlaI CTCGAG 1 cut(s) 1583
SmiMI CAYNNNNRTG 2 cut(s) 2312, 3858
SmlI CTYRAG 6 cut(s) 340, 1239, 1583, 2126, 2240, 3004
SmoI CTYRAG 6 cut(s) 340, 1239, 1583, 2126, 2240, 3004
SphI GCATGC 1 cut(s) 4204
SsiI CCGC 4 cut(s) 38, 331, 2651, 4382
SspI AATATT 5 cut(s) 458, 1371, 2332, 3185, 4180
StyD4I CCNGG 4 cut(s) 744, 1735, 2479, 3417
StyI CCWWGG 3 cut(s) 1167, 1264, 2746
TaiI ACGT 6 cut(s) 163, 844, 990, 1734, 2394, 2991
TaqI TCGA 9 cut(s) 1584, 2148, 2223, 2492, 3255, 3690, 3840, 3845, 4304
TatI WGTACW 5 cut(s) 42, 2156, 2456, 2517, 3862
TauI GCSGC 1 cut(s) 4384
TscAI CASTG 4 cut(s) 478, 3306, 3721, 3763
TseFI GTSAC 5 cut(s) 477, 2355, 3150, 3870, 4159
TseI GCWGC 8 cut(s) 170, 294, 297, 954, 1319, 2206, 3295, 4246
Tsp45I GTSAC 5 cut(s) 477, 2355, 3150, 3870, 4159
TspGWI ACGGA 3 cut(s) 566, 1477, 1773
TspRI CASTG 4 cut(s) 478, 3306, 3721, 3763
Van91I CCANNNNNTGG 1 cut(s) 309
VpaK11BI GGWCC 4 cut(s) 328, 749, 1360, 1566
XagI CCTNNNNNAGG 1 cut(s) 343
XbaI TCTAGA 3 cut(s) 2506, 3383, 3463
XceI RCATGY 6 cut(s) 258, 294, 1754, 2629, 4204, 4303
XhoI CTCGAG 1 cut(s) 1583
XmiI GTMKAC 2 cut(s) 1786, 3829
XmnI GAANNNNTTC 4 cut(s) 1677, 1731, 1848, 2636
ZraI GACGTC 1 cut(s) 2392
ZrmI AGTACT 1 cut(s) 2158
Zsp2I ATGCAT 2 cut(s) 2010, 3855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.