Rh4CG156500

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000203
Physical Location & Seq
Reverse (-)
34389252 .. 34404797
15546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG156500.1

Sequence Viewer

Length: 2028 bp
ATGGCCGACAAAAGAGATGGAATACAGCTAGCCATGGATGCGGTGACCAGAAACTTAGAGACTATTGCTCCTGAAGTTGAGTCCTGGCTGCATGATGTTAACAATACCATACAGGACAAGGAGACGTGTTTTGAGGAAGAAACTGTAGCAAAGGCAACATGCTGTAATGGATGGTTTCCAAATTTGAAGTATCGTCATTCCTTGAGTAGGAAAGCTAAGAAGATGACTGTGATTGTTGATAAGCTCCTTGGAGACGGGAGTTTCGCAGTCATATCTCACCCAGCTCCTCCCCCAGAGATATTTCCATTTCCAAACAAAAAACATTCCGAGTCTGTTGATAAGGCTTTGGCCAAGCCCCATGAAGGGGCAAGCTCCTCAGGAACCTCCAACCCTGCTCCTCCATCACTTATGAAACTATCTGAGAATTTGGAATACAGATTACCTTATACGAAGGTCGTGAATGCTTTGCATAATGATGATATCAACATGATTGGCATTTGCGGGACAATCAAAGGAGGAGATACGATGACAGCAAAAGAATTCATCCAGATAGTAAAACACCAAGATATATTTGAGGAGGTTGTGATGGCAGTTGTGTCCCATGATCCAGACTTGAAGCGGATACAAGTCGAAATTGGAGATATGCTAGGGCTGAATTTGGAAAATATGAGTTTGATTGAAGGAGCAGAGATGCTTCATGCTAGAATGTCTAGCGATACAGAGAGTGTGGTGCAAAACTTACAGAATCTTGAACAACTTGAAGTAAGGTCTTGTGACTCACTGGAAACAGTATTTGAGCTTGAAGGTTTAGAAATAAAAGAAAAGGATGGTGTTACTGCAACACTATTGTCTTGCTTGGAGAAAATGGAGTTGTATAAGCTACCCATGTTGGCATACTTGTGGAAGCCACCTCAAAACATTCTGGCATTTCAAAACTTAACAATGCTCCAAGTTTTGCAGTGCAACAGATTGGAATATGTGTTCCCGCTCTTCATACTGGAAGGTCTAGTGAAACTAGAAGCCATGTTTGTCAGAGATTGCCCTGGGATAGCAGACATCTTTGCAAAAACTGAAGAACATGGCGATGAAGAGAAAACAAATGAAATTGTTATTCCTCAACTAAAAATTCTCCATTTTACCGATTTACTTAGACTCAAAAGATTTTGTCCTGTTTCATGCACTGTTGACTGCCCATCATTGAGAACGCTGGTGCTCACCGACTGCGGTGACCTGGAGACATTTGTTCCACCGGTCGTATCCACAGGAGGTGACCCGATCTACCTTTTTGGTGAACAGGTTAAACCTTTTCGTGAGCTACGGTATATGGTGGTGAGCAGCTGTAACAATCTACTAGGTGTTTTCTCATCCAGTGTGGTGCAAAACTTACAGAATCTTGAACAACTTGAAGTAAGGTCTTGTGACTCACTGAAAACAGTATTTGAGCTTGAAGGTTTAGAAATAAAAGAAAAGGATGGTGTTACTGCAACACTATTGTCTTGCTTGGAGAAAATGGAGTTGGATAATCTACCCATGTTGGCATACTTGTGGAAGCCACCTCAAAACATTCTGGCATTTCAAAACTTAACAATGCTTCGAGTTTCGCATTGCAACAGATTGGAATATGTGTTCCCGCTCTTCATACTGGAAGGTCTAGTGAAACTAGAAGCCATGTTTGTCAGAGATTGCCCTGGGATAGCAGACATCTTTGCAAAAGCTGAAGAACATGGCGATGAAGAGAAAACAAATGAAATTGTTATTCGTCAACTAAAAACTCTCCATTTTACCGATTTACTTAGACTCAAAAGATTTTGTCCTGTTTCATGCACTGTTGACTGCCCATCATTGAGAACGCTGGTGCTCACCGACTGCGGTGACCTGGAGACATTTGTTCCACCGGTCGTATCCACAGGAAGTGACCCGATCTACCTTTTTGGTGAACAGTTCAAGCAGAAAGACAACAAGTCCCACAATGTCAAGAGGGGAAGTGATTTCCAACTCGAAGATAAATATCCTAACACGAGAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

675

Amino Acids

76.07

Weight (kDa)

5.02

Isoelectric Point (pI)

46.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 242 - 347 5e-26 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 435 - 562 4e-33 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 988, 1633
AciI CCGC 7 cut(s) 41, 501, 619, 986, 1224, 1631, 1869
AclWI GGATC 1 cut(s) 599
AcoI YGGCCR 2 cut(s) 3, 348
AcsI RAATTY 5 cut(s) 181, 424, 539, 655, 1125
AcuI CTGAAG 3 cut(s) 93, 1092, 1737
AfiI CCNNNNNNNGG 4 cut(s) 207, 362, 363, 364
AflIII ACRYGT 1 cut(s) 125
AgeI ACCGGT 2 cut(s) 1249, 1894
AhdI GACNNNNNGTC 1 cut(s) 1960
AjiI CACGTC 1 cut(s) 126
AjnI CCWGG 5 cut(s) 83, 1042, 1230, 1687, 1875
AjuI GAANNNNNNNTTGG 2 cut(s) 1499, 1531
AloI GAACNNNNNNTCC 4 cut(s) 965, 997, 1610, 1642
Alw21I GWGCWC 2 cut(s) 1215, 1860
Alw26I GTCTC 5 cut(s) 53, 116, 246, 1229, 1874
AlwI GGATC 1 cut(s) 599
AoxI GGCC 2 cut(s) 3, 348
ApeKI GCWGC 2 cut(s) 88, 1335
ApoI RAATTY 5 cut(s) 181, 424, 539, 655, 1125
ArsI GACNNNNNNTTYG 2 cut(s) 245, 277
AsiGI ACCGGT 2 cut(s) 1249, 1894
AsuNHI GCTAGC 1 cut(s) 28
AxyI CCTNAGG 1 cut(s) 376
BalI TGGCCA 1 cut(s) 350
BauI CACGAG 1 cut(s) 2017
Bbv12I GWGCWC 2 cut(s) 1215, 1860
BbvI GCAGC 2 cut(s) 75, 1347
BccI CCATC 8 cut(s) 11, 165, 409, 580, 821, 1201, 1466, 1846
BciT130I CCWGG 5 cut(s) 85, 1044, 1232, 1689, 1877
BciVI GTATCC 3 cut(s) 615, 1267, 1912
BcoDI GTCTC 5 cut(s) 53, 116, 246, 1229, 1874
BfaI CTAG 9 cut(s) 29, 647, 702, 711, 1007, 1016, 1352, 1652, 1661
BfmI CTRYAG 1 cut(s) 144
BfuI GTATCC 3 cut(s) 615, 1267, 1912
BisI GCNGC 2 cut(s) 89, 1336
BlsI GCNGC 2 cut(s) 90, 1337
Bme1390I CCNGG 5 cut(s) 85, 1044, 1232, 1689, 1877
BmeRI GACNNNNNGTC 1 cut(s) 1960
BmgBI CACGTC 1 cut(s) 126
BmiI GGNNCC 1 cut(s) 382
BmrFI CCNGG 5 cut(s) 85, 1044, 1232, 1689, 1877
BmsI GCATC 2 cut(s) 28, 681
BmtI GCTAGC 1 cut(s) 32
BpmI CTGGAG 2 cut(s) 1253, 1898
BpuEI CTTGAG 1 cut(s) 223
BsaBI GATNNNNATC 1 cut(s) 2007
BsaJI CCNNGG 6 cut(s) 33, 247, 1042, 1043, 1687, 1688
BsaWI WCCGGW 2 cut(s) 1249, 1894
BsaXI ACNNNNNCTCC 2 cut(s) 52, 82
Bsc4I CCNNNNNNNGG 4 cut(s) 207, 362, 363, 364
Bse118I RCCGGY 2 cut(s) 1249, 1894
Bse1I ACTGG 4 cut(s) 786, 1002, 1368, 1647
Bse21I CCTNAGG 1 cut(s) 376
Bse3DI GCAATG 1 cut(s) 1603
Bse8I GATNNNNATC 1 cut(s) 2007
BseBI CCWGG 5 cut(s) 85, 1044, 1232, 1689, 1877
BseDI CCNNGG 6 cut(s) 33, 247, 1042, 1043, 1687, 1688
BseGI GGATG 6 cut(s) 43, 176, 543, 832, 1364, 1477
BseJI GATNNNNATC 1 cut(s) 2007
BseLI CCNNNNNNNGG 4 cut(s) 207, 362, 363, 364
BseMI GCAATG 1 cut(s) 1603
BseMII CTCAG 2 cut(s) 390, 411
BseNI ACTGG 4 cut(s) 786, 1002, 1368, 1647
BseRI GAGGAG 5 cut(s) 276, 364, 387, 531, 590
BseXI GCAGC 2 cut(s) 75, 1347
BseYI CCCAGC 1 cut(s) 280
Bsh1285I CGRYCG 2 cut(s) 1254, 1899
BshFI GGCC 2 cut(s) 5, 350
BshTI ACCGGT 2 cut(s) 1249, 1894
BsiEI CGRYCG 2 cut(s) 1254, 1899
BsiHKAI GWGCWC 2 cut(s) 1215, 1860
BsiSI CCGG 2 cut(s) 1250, 1895
BslFI GGGAC 3 cut(s) 517, 583, 1948
BslI CCNNNNNNNGG 4 cut(s) 207, 362, 363, 364
BsmAI GTCTC 5 cut(s) 53, 116, 246, 1229, 1874
BsmBI CGTCTC 2 cut(s) 116, 246
BsmFI GGGAC 3 cut(s) 517, 583, 1948
BsmI GAATGC 1 cut(s) 466
BsnI GGCC 2 cut(s) 5, 350
Bsp1286I GDGCHC 2 cut(s) 1215, 1860
Bsp143I GATC 3 cut(s) 604, 1275, 1920
Bsp19I CCATGG 1 cut(s) 33
BspACI CCGC 7 cut(s) 41, 501, 619, 986, 1224, 1631, 1869
BspANI GGCC 2 cut(s) 5, 350
BspCNI CTCAG 2 cut(s) 389, 412
BspLI GGNNCC 1 cut(s) 382
BspOI GCTAGC 1 cut(s) 32
BspPI GGATC 1 cut(s) 599
BspQI GCTCTTC 2 cut(s) 995, 1640
BsrBI CCGCTC 2 cut(s) 988, 1633
BsrDI GCAATG 1 cut(s) 1603
BsrFI RCCGGY 2 cut(s) 1249, 1894
BsrI ACTGG 4 cut(s) 786, 1002, 1368, 1647
BssAI RCCGGY 2 cut(s) 1249, 1894
BssECI CCNNGG 6 cut(s) 33, 247, 1042, 1043, 1687, 1688
BssMI GATC 3 cut(s) 604, 1275, 1920
BssSI CACGAG 1 cut(s) 2017
BssT1I CCWWGG 2 cut(s) 33, 247
Bst2BI CACGAG 1 cut(s) 2017
Bst2UI CCWGG 5 cut(s) 85, 1044, 1232, 1689, 1877
Bst4CI ACNGT 8 cut(s) 145, 229, 790, 1183, 1320, 1435, 1828, 1941
Bst6I CTCTTC 4 cut(s) 995, 1083, 1640, 1728
BstC8I GCNNGC 2 cut(s) 30, 370
BstDEI CTNAG 6 cut(s) 55, 216, 376, 420, 1148, 1793
BstDSI CCRYGG 1 cut(s) 33
BstEII GGTNACC 4 cut(s) 43, 1226, 1268, 1871
BstENI CCTNNNNNAGG 1 cut(s) 205
BstF5I GGATG 6 cut(s) 43, 176, 543, 832, 1364, 1477
BstKTI GATC 3 cut(s) 607, 1278, 1923
BstMAI GTCTC 5 cut(s) 53, 116, 246, 1229, 1874
BstMBI GATC 3 cut(s) 604, 1275, 1920
BstMCI CGRYCG 2 cut(s) 1254, 1899
BstMWI GCNNNNNNNGC 1 cut(s) 38
BstNI CCWGG 5 cut(s) 85, 1044, 1232, 1689, 1877
BstNSI RCATGY 1 cut(s) 162
BstPI GGTNACC 4 cut(s) 43, 1226, 1268, 1871
BstSCI CCNGG 5 cut(s) 83, 1042, 1230, 1687, 1875
BstSFI CTRYAG 1 cut(s) 144
BstV1I GCAGC 2 cut(s) 75, 1347
Bsu36I CCTNAGG 1 cut(s) 376
BsuI GTATCC 3 cut(s) 615, 1267, 1912
BsuRI GGCC 2 cut(s) 5, 350
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 2 cut(s) 1098, 1743
BtrI CACGTC 1 cut(s) 126
BtsCI GGATG 6 cut(s) 43, 176, 543, 832, 1364, 1477
BtsI GCAGTG 1 cut(s) 965
BtsIMutI CAGTG 6 cut(s) 779, 965, 1179, 1375, 1424, 1824
Cac8I GCNNGC 2 cut(s) 30, 370
Cfr10I RCCGGY 2 cut(s) 1249, 1894
CspAI ACCGGT 2 cut(s) 1249, 1894
DdeI CTNAG 6 cut(s) 55, 216, 376, 420, 1148, 1793
DpnI GATC 3 cut(s) 606, 1277, 1922
DpnII GATC 3 cut(s) 604, 1275, 1920
DriI GACNNNNNGTC 1 cut(s) 1960
EaeI YGGCCR 2 cut(s) 3, 348
Eam1104I CTCTTC 4 cut(s) 995, 1083, 1640, 1728
Eam1105I GACNNNNNGTC 1 cut(s) 1960
EarI CTCTTC 4 cut(s) 995, 1083, 1640, 1728
Eco130I CCWWGG 2 cut(s) 33, 247
Eco32I GATATC 1 cut(s) 481
Eco57I CTGAAG 3 cut(s) 93, 1092, 1737
Eco81I CCTNAGG 1 cut(s) 376
Eco91I GGTNACC 4 cut(s) 43, 1226, 1268, 1871
EcoNI CCTNNNNNAGG 1 cut(s) 205
EcoO65I GGTNACC 4 cut(s) 43, 1226, 1268, 1871
EcoRI GAATTC 1 cut(s) 539
EcoRII CCWGG 5 cut(s) 83, 1042, 1230, 1687, 1875
EcoRV GATATC 1 cut(s) 481
EcoT14I CCWWGG 2 cut(s) 33, 247
ErhI CCWWGG 2 cut(s) 33, 247
Esp3I CGTCTC 2 cut(s) 116, 246
FaqI GGGAC 3 cut(s) 517, 583, 1948
FauI CCCGC 3 cut(s) 494, 993, 1638
Fnu4HI GCNGC 2 cut(s) 89, 1336
FokI GGATG 6 cut(s) 50, 183, 530, 839, 1351, 1484
Fsp4HI GCNGC 2 cut(s) 89, 1336
FspBI CTAG 9 cut(s) 29, 647, 702, 711, 1007, 1016, 1352, 1652, 1661
GluI GCNGC 2 cut(s) 89, 1336
GsaI CCCAGC 1 cut(s) 284
GsuI CTGGAG 2 cut(s) 1253, 1898
HaeIII GGCC 2 cut(s) 5, 350
HapII CCGG 2 cut(s) 1250, 1895
HincII GTYRAC 4 cut(s) 100, 1186, 1763, 1831
HindII GTYRAC 4 cut(s) 100, 1186, 1763, 1831
HinfI GANTC 8 cut(s) 80, 329, 745, 776, 1152, 1390, 1421, 1797
HpaI GTTAAC 1 cut(s) 100
HpaII CCGG 2 cut(s) 1250, 1895
Hpy166II GTNNAC 6 cut(s) 100, 1186, 1292, 1763, 1831, 1937
Hpy188I TCNGA 4 cut(s) 328, 421, 1034, 1679
Hpy188III TCNNGA 9 cut(s) 71, 378, 457, 547, 608, 749, 1310, 1394, 1975
Hpy8I GTNNAC 6 cut(s) 100, 1186, 1292, 1763, 1831, 1937
HpyAV CCTTC 7 cut(s) 356, 445, 674, 797, 995, 1442, 1640
HpyCH4III ACNGT 8 cut(s) 145, 229, 790, 1183, 1320, 1435, 1828, 1941
HpyCH4IV ACGT 1 cut(s) 125
HpyF10VI GCNNNNNNNGC 1 cut(s) 38
HpyF3I CTNAG 6 cut(s) 55, 216, 376, 420, 1148, 1793
HpySE526I ACGT 1 cut(s) 125
KspAI GTTAAC 1 cut(s) 100
Kzo9I GATC 3 cut(s) 604, 1275, 1920
LguI GCTCTTC 2 cut(s) 995, 1640
LmnI GCTCC 7 cut(s) 73, 249, 289, 377, 400, 683, 951
Lsp1109I GCAGC 2 cut(s) 75, 1347
LweI GCATC 2 cut(s) 28, 681
MaeI CTAG 9 cut(s) 29, 647, 702, 711, 1007, 1016, 1352, 1652, 1661
MaeII ACGT 1 cut(s) 125
MalI GATC 3 cut(s) 606, 1277, 1922
MbiI CCGCTC 2 cut(s) 988, 1633
MboI GATC 3 cut(s) 604, 1275, 1920
MboII GAAGA 9 cut(s) 149, 232, 982, 1085, 1100, 1627, 1730, 1745, 2012
MhlI GDGCHC 2 cut(s) 1215, 1860
MlsI TGGCCA 1 cut(s) 350
MluCI AATT 9 cut(s) 181, 424, 539, 633, 655, 1104, 1125, 1749, 2023
MluNI TGGCCA 1 cut(s) 350
MlyI GAGTC 6 cut(s) 89, 338, 770, 1146, 1415, 1791
MmeI TCCRAC 3 cut(s) 411, 1497, 2017
Mox20I TGGCCA 1 cut(s) 350
MscI TGGCCA 1 cut(s) 350
MseI TTAA 5 cut(s) 99, 938, 1299, 1583, 2026
MslI CAYNNNNRTG 5 cut(s) 474, 898, 1083, 1543, 1728
Msp20I TGGCCA 1 cut(s) 350
MspA1I CMGCKG 1 cut(s) 1338
MspI CCGG 2 cut(s) 1250, 1895
MspR9I CCNGG 5 cut(s) 85, 1044, 1232, 1689, 1877
Mva1269I GAATGC 1 cut(s) 466
MvaI CCWGG 5 cut(s) 85, 1044, 1232, 1689, 1877
MwoI GCNNNNNNNGC 1 cut(s) 38
NcoI CCATGG 1 cut(s) 33
NdeII GATC 3 cut(s) 604, 1275, 1920
NheI GCTAGC 1 cut(s) 28
NlaIV GGNNCC 1 cut(s) 382
NmuCI GTSAC 7 cut(s) 43, 773, 1226, 1268, 1418, 1871, 1913
NspI RCATGY 1 cut(s) 162
PasI CCCWGGG 2 cut(s) 1043, 1688
PciSI GCTCTTC 2 cut(s) 995, 1640
PctI GAATGC 1 cut(s) 466
PfeI GAWTC 2 cut(s) 745, 1390
PinAI ACCGGT 2 cut(s) 1249, 1894
PkrI GCNGC 2 cut(s) 90, 1337
PleI GAGTC 6 cut(s) 88, 337, 770, 1146, 1415, 1791
PpsI GAGTC 6 cut(s) 88, 337, 770, 1146, 1415, 1791
Psp6I CCWGG 5 cut(s) 83, 1042, 1230, 1687, 1875
PspEI GGTNACC 4 cut(s) 43, 1226, 1268, 1871
PspFI CCCAGC 1 cut(s) 280
PspGI CCWGG 5 cut(s) 83, 1042, 1230, 1687, 1875
PspN4I GGNNCC 1 cut(s) 382
PvuII CAGCTG 1 cut(s) 1338
RseI CAYNNNNRTG 5 cut(s) 474, 898, 1083, 1543, 1728
SapI GCTCTTC 2 cut(s) 995, 1640
SaqAI TTAA 5 cut(s) 99, 938, 1299, 1583, 2026
SatI GCNGC 2 cut(s) 89, 1336
Sau3AI GATC 3 cut(s) 604, 1275, 1920
SchI GAGTC 6 cut(s) 89, 338, 770, 1146, 1415, 1791
ScrFI CCNGG 5 cut(s) 85, 1044, 1232, 1689, 1877
SduI GDGCHC 2 cut(s) 1215, 1860
SfaNI GCATC 2 cut(s) 28, 681
SfcI CTRYAG 1 cut(s) 144
SmiMI CAYNNNNRTG 5 cut(s) 474, 898, 1083, 1543, 1728
SmlI CTYRAG 1 cut(s) 202
SmoI CTYRAG 1 cut(s) 202
Sse9I AATT 9 cut(s) 181, 424, 539, 633, 655, 1104, 1125, 1749, 2023
SsiI CCGC 7 cut(s) 41, 501, 619, 986, 1224, 1631, 1869
SspMI CTAG 9 cut(s) 29, 647, 702, 711, 1007, 1016, 1352, 1652, 1661
StyD4I CCNGG 5 cut(s) 83, 1042, 1230, 1687, 1875
StyI CCWWGG 2 cut(s) 33, 247
TaaI ACNGT 8 cut(s) 145, 229, 790, 1183, 1320, 1435, 1828, 1941
TaiI ACGT 1 cut(s) 128
TaqI TCGA 3 cut(s) 630, 1594, 1998
TasI AATT 9 cut(s) 181, 424, 539, 633, 655, 1104, 1125, 1749, 2023
TfiI GAWTC 2 cut(s) 745, 1390
Tru1I TTAA 5 cut(s) 99, 938, 1299, 1583, 2026
Tru9I TTAA 5 cut(s) 99, 938, 1299, 1583, 2026
TscAI CASTG 6 cut(s) 786, 965, 1186, 1375, 1431, 1831
TseFI GTSAC 7 cut(s) 43, 773, 1226, 1268, 1418, 1871, 1913
TseI GCWGC 2 cut(s) 88, 1335
Tsp45I GTSAC 7 cut(s) 43, 773, 1226, 1268, 1418, 1871, 1913
TspRI CASTG 6 cut(s) 786, 965, 1186, 1375, 1431, 1831
XagI CCTNNNNNAGG 1 cut(s) 205
XapI RAATTY 5 cut(s) 181, 424, 539, 655, 1125
XceI RCATGY 1 cut(s) 162
XspI CTAG 9 cut(s) 29, 647, 702, 711, 1007, 1016, 1352, 1652, 1661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.