Rmu_sc0000294.1_g000018

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000294.1
OG0000308
Physical Location & Seq
Forward (+)
90284 .. 92122
1839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000294.1_g000018.1.cds

Sequence Viewer

Length: 1755 bp
atggcaattgatgcaatgggagcccgctttgtctcctccctagcattgggtgatggcaagaaaccggtggacctgcgtccatccaaaggactgagacaacccgaagctttcatggtgggaaagctgctcacggcgccggaagactcccgtcgctctttccttggcatgttccgatctgcatggcggatcaatggcagactgagcgttgaagaagttggagaagacgacagggttctgttcactttcacagatccctctgatgtggatagggtttggaaaggtgcccctgttgcactagcgccgtatgacggtatcagttcggcaagcgagataccgaagaaatcatcctactggatgacactgcaaggggtaccgccggcgttcaggtttgagcgtattatgcgcctgatcggtagtacgctgggagatttcaaggagtttgattgtctggctttccggaccggagtcttgcgcatcagggtcgagatcgactatgcaaagcctttcttgtttcgtcgctgcttatgggtggaagatgaagttcaattcatggtgcagtttcggtacgataagttgtttggcagatgcggtacctgtggcctagttacccatgttggccttcctttttcagggccagatctggaagaagatagtgatacaccagttggagcggtggcgcagcccacgaccttggcaatactacggggacaggaaaaccctaataacaatagtgtggtggtaaacaatcaaaccttgatcttcaaggctcagatacgaaatagcataccggaaactatacttcccccatccgtggtggccatgcgtcgtgaaagacaggtgcaaattagagaactaagagagccaagactcaatggagatccaattacaggacaaaggcgaagcagggaaaatcatgagggaccttccaacaacaatgatcaaccaaagagtgcactagcgccgtatgacggtatcagttcggcaagcgagataccgaagaaatcatcctactggatgacactgcaaggggtaccgccggcgttcaggtttgagcgtattatgcgcctgatcggtagtacgctgggagatttcaaggagtttgattgtctggctttccggaccggagtcttgcgcatcagggtcgagatcgactatgcaaagcctttcttgtttcgtcgctgcttatgggtggaagatgaagttcaattcatggtgcagtttcggtacgataagttgtttggcagatgcggtacctgtggcctagttacccatgttggccttcctttttcagggccagatctggaagaagatagtgatacaccagttggagcggtggcgcagcccacgaccttggcaatactacggggacaggaaaaccctaataacaatagtgtggtggtaaacaatcaaaccttgatcttcaaggctcagatacgaaatagcataccggaaactatacttcccccatccgtggtggccatgcgtcgtgaaagacaggtgcaaattagagaactaagagagccaagactcaatggagatccaattacaggacaaaggcgaagcagggaaaatgatgaggtaattatttctccaaaacaaatacgcttaagtcttgctattgggaagaaaaatttggatgcagtgactatgggtttattggagggaccttccaacaacaatgatcaaccaaagagaaaaagaggacgcccggttggaagtgtgaataagttgccttatggaacagcaggaaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

584

Amino Acids

65.49

Weight (kDa)

9.29

Isoelectric Point (pI)

46.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 473, 1133
Acc36I ACCTGC 1 cut(s) 81
Acc65I GGTACC 4 cut(s) 370, 590, 1030, 1250
AccB1I GGYRCC 6 cut(s) 133, 281, 370, 590, 1030, 1250
AccBSI CCGCTC 2 cut(s) 671, 1331
AccIII TCCGGA 2 cut(s) 456, 1116
AciI CCGC 8 cut(s) 25, 184, 374, 588, 671, 1034, 1248, 1331
AclWI GGATC 4 cut(s) 194, 245, 872, 1532
AcoI YGGCCR 2 cut(s) 816, 1476
AcsI RAATTY 1 cut(s) 1630
AcyI GRCGYC 2 cut(s) 134, 1705
AfaI GTAC 8 cut(s) 372, 418, 566, 592, 1032, 1078, 1226, 1252
AflII CTTAAG 1 cut(s) 1606
AgeI ACCGGT 1 cut(s) 64
AgsI TTSAA 7 cut(s) 209, 433, 545, 763, 1093, 1205, 1423
AjuI GAANNNNNNNTTGG 2 cut(s) 1616, 1648
AluBI AGCT 2 cut(s) 107, 124
AluI AGCT 2 cut(s) 107, 124
Alw21I GWGCWC 1 cut(s) 955
Alw26I GTCTC 2 cut(s) 37, 88
Alw44I GTGCAC 1 cut(s) 951
AlwI GGATC 4 cut(s) 194, 245, 872, 1532
Aor13HI TCCGGA 2 cut(s) 456, 1116
AoxI GGCC 8 cut(s) 598, 616, 632, 816, 1258, 1276, 1292, 1476
ApaLI GTGCAC 1 cut(s) 951
ApeKI GCWGC 5 cut(s) 124, 519, 679, 1179, 1339
ApoI RAATTY 1 cut(s) 1630
AsiGI ACCGGT 1 cut(s) 64
Asp718I GGTACC 4 cut(s) 370, 590, 1030, 1250
AspLEI GCGC 9 cut(s) 136, 301, 405, 474, 679, 961, 1065, 1134, 1339
AspS9I GGNCC 7 cut(s) 70, 459, 632, 920, 1119, 1292, 1664
AsuC2I CCSGG 1 cut(s) 1709
AsuHPI GGTGA 1 cut(s) 62
AvaII GGWCC 5 cut(s) 70, 459, 920, 1119, 1664
BaeGI GKGCMC 2 cut(s) 286, 955
BaeI ACNNNNGTAYC 4 cut(s) 648, 681, 1308, 1341
BalI TGGCCA 2 cut(s) 818, 1478
BanI GGYRCC 6 cut(s) 133, 281, 370, 590, 1030, 1250
BanII GRGCYC 1 cut(s) 25
BbsI GAAGAC 2 cut(s) 147, 228
Bbv12I GWGCWC 1 cut(s) 955
BbvI GCAGC 5 cut(s) 111, 506, 691, 1166, 1351
BccI CCATC 4 cut(s) 47, 88, 814, 1474
BceAI ACGGC 3 cut(s) 147, 286, 946
BcgI CGANNNNNNTGC 4 cut(s) 463, 497, 1123, 1157
BclI TGATCA 2 cut(s) 937, 1681
BcnI CCSGG 1 cut(s) 1709
BcoDI GTCTC 2 cut(s) 37, 88
BfaI CTAG 5 cut(s) 41, 296, 602, 956, 1262
BfoI RGCGCY 3 cut(s) 137, 302, 962
BfrI CTTAAG 1 cut(s) 1606
BfuAI ACCTGC 1 cut(s) 81
BglII AGATCT 2 cut(s) 637, 1297
BisI GCNGC 5 cut(s) 125, 520, 680, 1180, 1340
BlsI GCNGC 5 cut(s) 126, 521, 681, 1181, 1341
Bme1390I CCNGG 1 cut(s) 1709
Bme18I GGWCC 5 cut(s) 70, 459, 920, 1119, 1664
BmgT120I GGNCC 7 cut(s) 70, 459, 632, 920, 1119, 1292, 1664
BmiI GGNNCC 9 cut(s) 22, 135, 283, 372, 592, 921, 1032, 1252, 1665
BmrFI CCNGG 1 cut(s) 1709
BmsI GCATC 5 cut(s) 483, 575, 1143, 1235, 1627
BoxI GACNNNNGTC 4 cut(s) 75, 147, 464, 1124
BpiI GAAGAC 2 cut(s) 147, 228
BpuMI CCSGG 1 cut(s) 1709
BsaHI GRCGYC 2 cut(s) 134, 1705
BsaJI CCNNGG 5 cut(s) 160, 690, 810, 1350, 1470
BsaWI WCCGGW 7 cut(s) 64, 456, 461, 787, 1116, 1121, 1447
Bse118I RCCGGY 3 cut(s) 64, 376, 1036
Bse1I ACTGG 4 cut(s) 356, 662, 1016, 1322
Bse3DI GCAATG 1 cut(s) 21
BseAI TCCGGA 2 cut(s) 456, 1116
BseDI CCNNGG 5 cut(s) 160, 690, 810, 1350, 1470
BseGI GGATG 8 cut(s) 80, 344, 360, 806, 1004, 1020, 1466, 1642
BseMI GCAATG 1 cut(s) 21
BseMII CTCAG 4 cut(s) 83, 191, 782, 1442
BseNI ACTGG 4 cut(s) 356, 662, 1016, 1322
BseRI GAGGAG 1 cut(s) 25
BseSI GKGCMC 2 cut(s) 286, 955
BseXI GCAGC 5 cut(s) 111, 506, 691, 1166, 1351
BseYI CCCAGC 2 cut(s) 421, 1081
BsgI GTGCAG 2 cut(s) 575, 1235
BshFI GGCC 8 cut(s) 600, 618, 634, 818, 1260, 1278, 1294, 1478
BshNI GGYRCC 6 cut(s) 133, 281, 370, 590, 1030, 1250
BshTI ACCGGT 1 cut(s) 64
BsiHKAI GWGCWC 1 cut(s) 955
BslFI GGGAC 4 cut(s) 720, 933, 1380, 1677
BsmAI GTCTC 2 cut(s) 37, 88
BsmFI GGGAC 4 cut(s) 720, 933, 1380, 1677
BsnI GGCC 8 cut(s) 600, 618, 634, 818, 1260, 1278, 1294, 1478
Bsp1286I GDGCHC 3 cut(s) 25, 286, 955
Bsp13I TCCGGA 2 cut(s) 456, 1116
BspACI CCGC 8 cut(s) 25, 184, 374, 588, 671, 1034, 1248, 1331
BspANI GGCC 8 cut(s) 600, 618, 634, 818, 1260, 1278, 1294, 1478
BspCNI CTCAG 4 cut(s) 84, 192, 781, 1441
BspEI TCCGGA 2 cut(s) 456, 1116
BspHI TCATGA 1 cut(s) 913
BspLI GGNNCC 9 cut(s) 22, 135, 283, 372, 592, 921, 1032, 1252, 1665
BspMI ACCTGC 1 cut(s) 81
BspPI GGATC 4 cut(s) 194, 245, 872, 1532
BspT107I GGYRCC 6 cut(s) 133, 281, 370, 590, 1030, 1250
BspTI CTTAAG 1 cut(s) 1606
BsrBI CCGCTC 2 cut(s) 671, 1331
BsrDI GCAATG 1 cut(s) 21
BsrFI RCCGGY 3 cut(s) 64, 376, 1036
BsrI ACTGG 4 cut(s) 356, 662, 1016, 1322
BssAI RCCGGY 3 cut(s) 64, 376, 1036
BssECI CCNNGG 5 cut(s) 160, 690, 810, 1350, 1470
BssNI GRCGYC 2 cut(s) 134, 1705
BssT1I CCWWGG 3 cut(s) 160, 690, 1350
Bst4CI ACNGT 2 cut(s) 311, 971
BstACI GRCGYC 2 cut(s) 134, 1705
BstAFI CTTAAG 1 cut(s) 1606
BstAPI GCANNNNNTGC 1 cut(s) 11
BstC8I GCNNGC 5 cut(s) 25, 325, 378, 985, 1038
BstDEI CTNAG 6 cut(s) 92, 200, 768, 854, 1428, 1514
BstDSI CCRYGG 2 cut(s) 810, 1470
BstENI CCTNNNNNAGG 2 cut(s) 627, 1287
BstF5I GGATG 8 cut(s) 80, 344, 360, 806, 1004, 1020, 1466, 1642
BstH2I RGCGCY 3 cut(s) 137, 302, 962
BstHHI GCGC 9 cut(s) 136, 301, 405, 474, 679, 961, 1065, 1134, 1339
BstMAI GTCTC 2 cut(s) 37, 88
BstMWI GCNNNNNNNGC 7 cut(s) 11, 20, 133, 201, 290, 400, 1060
BstNSI RCATGY 1 cut(s) 169
BstPAI GACNNNNGTC 4 cut(s) 75, 147, 464, 1124
BstSCI CCNGG 1 cut(s) 1707
BstSLI GKGCMC 2 cut(s) 286, 955
BstV1I GCAGC 5 cut(s) 111, 506, 691, 1166, 1351
BstV2I GAAGAC 2 cut(s) 147, 228
BstX2I RGATCY 5 cut(s) 250, 637, 877, 1297, 1537
BstXI CCANNNNNNTGG 2 cut(s) 691, 1351
BstYI RGATCY 5 cut(s) 250, 637, 877, 1297, 1537
BsuRI GGCC 8 cut(s) 600, 618, 634, 818, 1260, 1278, 1294, 1478
BtgI CCRYGG 2 cut(s) 810, 1470
BtsCI GGATG 8 cut(s) 80, 344, 360, 806, 1004, 1020, 1466, 1642
BtsI GCAGTG 3 cut(s) 359, 1019, 1647
BtsIMutI CAGTG 3 cut(s) 359, 1019, 1647
BveI ACCTGC 1 cut(s) 81
Cac8I GCNNGC 5 cut(s) 25, 325, 378, 985, 1038
CciI TCATGA 1 cut(s) 913
CfoI GCGC 9 cut(s) 136, 301, 405, 474, 679, 961, 1065, 1134, 1339
Cfr10I RCCGGY 3 cut(s) 64, 376, 1036
Cfr13I GGNCC 7 cut(s) 70, 459, 632, 920, 1119, 1292, 1664
CpoI CGGWCCG 2 cut(s) 459, 1119
CseI GACGC 4 cut(s) 65, 812, 1472, 1713
Csp6I GTAC 8 cut(s) 371, 417, 565, 591, 1031, 1077, 1225, 1251
CspAI ACCGGT 1 cut(s) 64
CspI CGGWCCG 2 cut(s) 459, 1119
CviQI GTAC 8 cut(s) 371, 417, 565, 591, 1031, 1077, 1225, 1251
DdeI CTNAG 6 cut(s) 92, 200, 768, 854, 1428, 1514
DinI GGCGCC 1 cut(s) 135
EaeI YGGCCR 2 cut(s) 816, 1476
EciI GGCGGA 1 cut(s) 199
Eco130I CCWWGG 3 cut(s) 160, 690, 1350
Eco24I GRGCYC 1 cut(s) 25
Eco47I GGWCC 5 cut(s) 70, 459, 920, 1119, 1664
EcoNI CCTNNNNNAGG 2 cut(s) 627, 1287
EcoO109I RGGNCCY 2 cut(s) 920, 1664
EcoT14I CCWWGG 3 cut(s) 160, 690, 1350
EcoT38I GRGCYC 1 cut(s) 25
EgeI GGCGCC 1 cut(s) 135
EheI GGCGCC 1 cut(s) 135
ErhI CCWWGG 3 cut(s) 160, 690, 1350
FalI AAGNNNNNCTT 4 cut(s) 491, 523, 1151, 1183
FaqI GGGAC 4 cut(s) 720, 933, 1380, 1677
FauI CCCGC 1 cut(s) 32
FbaI TGATCA 2 cut(s) 937, 1681
Fnu4HI GCNGC 5 cut(s) 125, 520, 680, 1180, 1340
FokI GGATG 8 cut(s) 67, 331, 367, 793, 991, 1027, 1453, 1649
FriOI GRGCYC 1 cut(s) 25
Fsp4HI GCNGC 5 cut(s) 125, 520, 680, 1180, 1340
FspBI CTAG 5 cut(s) 41, 296, 602, 956, 1262
FspI TGCGCA 2 cut(s) 473, 1133
GlaI GCGC 9 cut(s) 135, 300, 404, 473, 678, 960, 1064, 1133, 1338
GluI GCNGC 5 cut(s) 125, 520, 680, 1180, 1340
GsaI CCCAGC 2 cut(s) 425, 1085
HaeII RGCGCY 3 cut(s) 137, 302, 962
HaeIII GGCC 8 cut(s) 600, 618, 634, 818, 1260, 1278, 1294, 1478
HgaI GACGC 4 cut(s) 65, 812, 1472, 1713
HhaI GCGC 9 cut(s) 136, 301, 405, 474, 679, 961, 1065, 1134, 1339
Hin1I GRCGYC 2 cut(s) 134, 1705
Hin6I GCGC 9 cut(s) 134, 299, 403, 472, 677, 959, 1063, 1132, 1337
HinP1I GCGC 9 cut(s) 134, 299, 403, 472, 677, 959, 1063, 1132, 1337
HindIII AAGCTT 1 cut(s) 105
HinfI GANTC 5 cut(s) 143, 465, 867, 1125, 1527
HphI GGTGA 1 cut(s) 62
Hpy166II GTNNAC 5 cut(s) 70, 240, 742, 953, 1402
Hpy188I TCNGA 4 cut(s) 173, 259, 771, 1431
Hpy188III TCNNGA 9 cut(s) 457, 484, 641, 827, 914, 1117, 1144, 1301, 1487
Hpy8I GTNNAC 5 cut(s) 70, 240, 742, 953, 1402
Hpy99I CGWCG 5 cut(s) 153, 519, 828, 1179, 1488
HpyAV CCTTC 4 cut(s) 629, 933, 1289, 1677
HpyCH4III ACNGT 2 cut(s) 311, 971
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 20, 133, 201, 290, 400, 1060
HpyF3I CTNAG 6 cut(s) 92, 200, 768, 854, 1428, 1514
Hsp92I GRCGYC 2 cut(s) 134, 1705
HspAI GCGC 9 cut(s) 134, 299, 403, 472, 677, 959, 1063, 1132, 1337
KasI GGCGCC 1 cut(s) 133
Kpn2I TCCGGA 2 cut(s) 456, 1116
KpnI GGTACC 4 cut(s) 374, 594, 1034, 1254
KroI GCCGGC 2 cut(s) 376, 1036
KroNI GCCGGC 2 cut(s) 378, 1038
Ksp22I TGATCA 2 cut(s) 937, 1681
LmnI GCTCC 3 cut(s) 20, 668, 1328
Lsp1109I GCAGC 5 cut(s) 111, 506, 691, 1166, 1351
LweI GCATC 5 cut(s) 483, 575, 1143, 1235, 1627
MaeI CTAG 5 cut(s) 41, 296, 602, 956, 1262
MaeIII GTNAC 3 cut(s) 604, 1264, 1642
MbiI CCGCTC 2 cut(s) 671, 1331
MfeI CAATTG 1 cut(s) 6
MflI RGATCY 5 cut(s) 250, 637, 877, 1297, 1537
MhlI GDGCHC 3 cut(s) 25, 286, 955
MlsI TGGCCA 2 cut(s) 818, 1478
MluCI AATT 9 cut(s) 6, 545, 843, 882, 1205, 1503, 1542, 1581, 1630
MluNI TGGCCA 2 cut(s) 818, 1478
Mly113I GGCGCC 1 cut(s) 134
MlyI GAGTC 5 cut(s) 137, 474, 861, 1134, 1521
MmeI TCCRAC 6 cut(s) 196, 646, 951, 1306, 1693, 1695
MnlI CCTC 6 cut(s) 46, 265, 910, 1570, 1654, 1694
Mox20I TGGCCA 2 cut(s) 818, 1478
MreI CGCCGGCG 2 cut(s) 376, 1036
MroI TCCGGA 2 cut(s) 456, 1116
MroNI GCCGGC 2 cut(s) 376, 1036
MscI TGGCCA 2 cut(s) 818, 1478
MseI TTAA 1 cut(s) 1607
Msp20I TGGCCA 2 cut(s) 818, 1478
MspCI CTTAAG 1 cut(s) 1606
MspR9I CCNGG 1 cut(s) 1709
MunI CAATTG 1 cut(s) 6
MwoI GCNNNNNNNGC 7 cut(s) 11, 20, 133, 201, 290, 400, 1060
NaeI GCCGGC 2 cut(s) 378, 1038
NarI GGCGCC 1 cut(s) 134
NciI CCSGG 1 cut(s) 1709
NgoMIV GCCGGC 2 cut(s) 376, 1036
NlaIV GGNNCC 9 cut(s) 22, 135, 283, 372, 592, 921, 1032, 1252, 1665
NmuCI GTSAC 1 cut(s) 1642
NsbI TGCGCA 2 cut(s) 473, 1133
NspI RCATGY 1 cut(s) 169
PagI TCATGA 1 cut(s) 913
PdiI GCCGGC 2 cut(s) 378, 1038
PinAI ACCGGT 1 cut(s) 64
PkrI GCNGC 5 cut(s) 126, 521, 681, 1181, 1341
PleI GAGTC 5 cut(s) 137, 473, 861, 1133, 1521
PluTI GGCGCC 1 cut(s) 137
PpsI GAGTC 5 cut(s) 137, 473, 861, 1133, 1521
PpuMI RGGWCCY 2 cut(s) 920, 1664
PshAI GACNNNNGTC 4 cut(s) 75, 147, 464, 1124
Psp5II RGGWCCY 2 cut(s) 920, 1664
PspFI CCCAGC 2 cut(s) 421, 1081
PspN4I GGNNCC 9 cut(s) 22, 135, 283, 372, 592, 921, 1032, 1252, 1665
PspPI GGNCC 7 cut(s) 70, 459, 632, 920, 1119, 1292, 1664
PspPPI RGGWCCY 2 cut(s) 920, 1664
PsuI RGATCY 5 cut(s) 250, 637, 877, 1297, 1537
RsaI GTAC 8 cut(s) 372, 418, 566, 592, 1032, 1078, 1226, 1252
RsaNI GTAC 8 cut(s) 371, 417, 565, 591, 1031, 1077, 1225, 1251
Rsr2I CGGWCCG 2 cut(s) 459, 1119
RsrII CGGWCCG 2 cut(s) 459, 1119
SaqAI TTAA 1 cut(s) 1607
SatI GCNGC 5 cut(s) 125, 520, 680, 1180, 1340
Sau96I GGNCC 7 cut(s) 70, 459, 632, 920, 1119, 1292, 1664
SchI GAGTC 5 cut(s) 137, 474, 861, 1134, 1521
ScrFI CCNGG 1 cut(s) 1709
SduI GDGCHC 3 cut(s) 25, 286, 955
SfaNI GCATC 5 cut(s) 483, 575, 1143, 1235, 1627
SfoI GGCGCC 1 cut(s) 135
SgrAI CRCCGGYG 2 cut(s) 376, 1036
SinI GGWCC 5 cut(s) 70, 459, 920, 1119, 1664
SmlI CTYRAG 1 cut(s) 1606
SmoI CTYRAG 1 cut(s) 1606
Sse9I AATT 9 cut(s) 6, 545, 843, 882, 1205, 1503, 1542, 1581, 1630
SsiI CCGC 8 cut(s) 25, 184, 374, 588, 671, 1034, 1248, 1331
SspDI GGCGCC 1 cut(s) 133
SspMI CTAG 5 cut(s) 41, 296, 602, 956, 1262
StyD4I CCNGG 1 cut(s) 1707
StyI CCWWGG 3 cut(s) 160, 690, 1350
TaaI ACNGT 2 cut(s) 311, 971
TaqI TCGA 4 cut(s) 483, 489, 1143, 1149
TasI AATT 9 cut(s) 6, 545, 843, 882, 1205, 1503, 1542, 1581, 1630
Tru1I TTAA 1 cut(s) 1607
Tru9I TTAA 1 cut(s) 1607
TscAI CASTG 3 cut(s) 366, 1026, 1647
TseFI GTSAC 1 cut(s) 1642
TseI GCWGC 5 cut(s) 124, 519, 679, 1179, 1339
Tsp45I GTSAC 1 cut(s) 1642
TspDTI ATGAA 5 cut(s) 100, 538, 552, 1198, 1212
TspGWI ACGGA 2 cut(s) 799, 1459
TspRI CASTG 3 cut(s) 366, 1026, 1647
Vha464I CTTAAG 1 cut(s) 1606
VneI GTGCAC 1 cut(s) 951
VpaK11BI GGWCC 5 cut(s) 70, 459, 920, 1119, 1664
XagI CCTNNNNNAGG 2 cut(s) 627, 1287
XapI RAATTY 1 cut(s) 1630
XceI RCATGY 1 cut(s) 169
XspI CTAG 5 cut(s) 41, 296, 602, 956, 1262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.