ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 156 |
| AccI | GTMKAC | 1 cut(s) | 146 |
| AciI | CCGC | 2 cut(s) | 53, 154 |
| AclWI | GGATC | 4 cut(s) | 81, 197, 248, 270 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 89 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 259, 291 |
| AluBI | AGCT | 2 cut(s) | 26, 127 |
| AluI | AGCT | 2 cut(s) | 26, 127 |
| AlwI | GGATC | 4 cut(s) | 81, 197, 248, 270 |
| AoxI | GGCC | 2 cut(s) | 3, 286 |
| ApeKI | GCWGC | 1 cut(s) | 23 |
| AspS9I | GGNCC | 1 cut(s) | 287 |
| BbvI | GCAGC | 1 cut(s) | 35 |
| BccI | CCATC | 1 cut(s) | 253 |
| BfaI | CTAG | 2 cut(s) | 27, 270 |
| BisI | GCNGC | 1 cut(s) | 24 |
| BlsI | GCNGC | 1 cut(s) | 25 |
| BmgT120I | GGNCC | 1 cut(s) | 287 |
| BmrI | ACTGGG | 1 cut(s) | 228 |
| BmsI | GCATC | 2 cut(s) | 4, 192 |
| BmuI | ACTGGG | 1 cut(s) | 228 |
| BsaJI | CCNNGG | 2 cut(s) | 87, 290 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 89 |
| Bse1I | ACTGG | 1 cut(s) | 223 |
| Bse3DI | GCAATG | 1 cut(s) | 24 |
| BseDI | CCNNGG | 2 cut(s) | 87, 290 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 89 |
| BseMI | GCAATG | 1 cut(s) | 24 |
| BseNI | ACTGG | 1 cut(s) | 223 |
| BseXI | GCAGC | 1 cut(s) | 35 |
| BshFI | GGCC | 2 cut(s) | 5, 288 |
| BsiSI | CCGG | 1 cut(s) | 104 |
| BslFI | GGGAC | 1 cut(s) | 105 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 89 |
| BsmFI | GGGAC | 1 cut(s) | 105 |
| BsnI | GGCC | 2 cut(s) | 5, 288 |
| Bsp143I | GATC | 4 cut(s) | 73, 189, 253, 262 |
| BspACI | CCGC | 2 cut(s) | 53, 154 |
| BspANI | GGCC | 2 cut(s) | 5, 288 |
| BspPI | GGATC | 4 cut(s) | 81, 197, 248, 270 |
| BsrBI | CCGCTC | 1 cut(s) | 156 |
| BsrDI | GCAATG | 1 cut(s) | 24 |
| BsrI | ACTGG | 1 cut(s) | 223 |
| BssECI | CCNNGG | 2 cut(s) | 87, 290 |
| BssMI | GATC | 4 cut(s) | 73, 189, 253, 262 |
| BssNAI | GTATAC | 1 cut(s) | 147 |
| BssT1I | CCWWGG | 2 cut(s) | 87, 290 |
| Bst1107I | GTATAC | 1 cut(s) | 147 |
| Bst4CI | ACNGT | 1 cut(s) | 136 |
| Bst6I | CTCTTC | 1 cut(s) | 43 |
| BstC8I | GCNNGC | 1 cut(s) | 33 |
| BstKTI | GATC | 4 cut(s) | 76, 192, 256, 265 |
| BstMBI | GATC | 4 cut(s) | 73, 189, 253, 262 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 23, 32, 124 |
| BstNSI | RCATGY | 1 cut(s) | 172 |
| BstV1I | GCAGC | 1 cut(s) | 35 |
| BstX2I | RGATCY | 2 cut(s) | 73, 253 |
| BstYI | RGATCY | 2 cut(s) | 73, 253 |
| BstZ17I | GTATAC | 1 cut(s) | 147 |
| BsuRI | GGCC | 2 cut(s) | 5, 288 |
| Cac8I | GCNNGC | 1 cut(s) | 33 |
| Cfr13I | GGNCC | 1 cut(s) | 287 |
| CviAII | CATG | 2 cut(s) | 169, 233 |
| CviJI | RGCY | 6 cut(s) | 5, 26, 31, 103, 127, 288 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 26, 31, 103, 127, 288 |
| DpnI | GATC | 4 cut(s) | 75, 191, 255, 264 |
| DpnII | GATC | 4 cut(s) | 73, 189, 253, 262 |
| Eam1104I | CTCTTC | 1 cut(s) | 43 |
| EarI | CTCTTC | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 2 cut(s) | 87, 290 |
| EcoO109I | RGGNCCY | 1 cut(s) | 287 |
| EcoT14I | CCWWGG | 2 cut(s) | 87, 290 |
| ErhI | CCWWGG | 2 cut(s) | 87, 290 |
| FaeI | CATG | 2 cut(s) | 172, 236 |
| FaiI | YATR | 4 cut(s) | 116, 147, 170, 234 |
| FaqI | GGGAC | 1 cut(s) | 105 |
| FatI | CATG | 2 cut(s) | 168, 232 |
| FblI | GTMKAC | 1 cut(s) | 146 |
| Fnu4HI | GCNGC | 1 cut(s) | 24 |
| Fsp4HI | GCNGC | 1 cut(s) | 24 |
| FspBI | CTAG | 2 cut(s) | 27, 270 |
| GluI | GCNGC | 1 cut(s) | 24 |
| HaeIII | GGCC | 2 cut(s) | 5, 288 |
| HapII | CCGG | 1 cut(s) | 104 |
| Hin1II | CATG | 2 cut(s) | 172, 236 |
| HpaII | CCGG | 1 cut(s) | 104 |
| Hpy166II | GTNNAC | 1 cut(s) | 147 |
| Hpy188I | TCNGA | 2 cut(s) | 253, 258 |
| Hpy188III | TCNNGA | 1 cut(s) | 238 |
| Hpy8I | GTNNAC | 1 cut(s) | 147 |
| HpyAV | CCTTC | 1 cut(s) | 50 |
| HpyCH4III | ACNGT | 1 cut(s) | 136 |
| HpyCH4V | TGCA | 1 cut(s) | 17 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 23, 32, 124 |
| Hsp92II | CATG | 2 cut(s) | 172, 236 |
| Kzo9I | GATC | 4 cut(s) | 73, 189, 253, 262 |
| LmnI | GCTCC | 1 cut(s) | 132 |
| LpnPI | CCDG | 5 cut(s) | 81, 117, 149, 204, 251 |
| Lsp1109I | GCAGC | 1 cut(s) | 35 |
| LweI | GCATC | 2 cut(s) | 4, 192 |
| MaeI | CTAG | 2 cut(s) | 27, 270 |
| MalI | GATC | 4 cut(s) | 75, 191, 255, 264 |
| MbiI | CCGCTC | 1 cut(s) | 156 |
| MboI | GATC | 4 cut(s) | 73, 189, 253, 262 |
| MboII | GAAGA | 3 cut(s) | 30, 68, 224 |
| MflI | RGATCY | 2 cut(s) | 73, 253 |
| MluCI | AATT | 1 cut(s) | 301 |
| MnlI | CCTC | 5 cut(s) | 16, 46, 180, 273, 278 |
| MseI | TTAA | 1 cut(s) | 300 |
| MspI | CCGG | 1 cut(s) | 104 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 23, 32, 124 |
| NdeII | GATC | 4 cut(s) | 73, 189, 253, 262 |
| NlaIII | CATG | 2 cut(s) | 172, 236 |
| NspI | RCATGY | 1 cut(s) | 172 |
| PflFI | GACNNNGTC | 2 cut(s) | 96, 233 |
| PkrI | GCNGC | 1 cut(s) | 25 |
| PspPI | GGNCC | 1 cut(s) | 287 |
| PsuI | RGATCY | 2 cut(s) | 73, 253 |
| PsyI | GACNNNGTC | 2 cut(s) | 96, 233 |
| SaqAI | TTAA | 1 cut(s) | 300 |
| SatI | GCNGC | 1 cut(s) | 24 |
| Sau3AI | GATC | 4 cut(s) | 73, 189, 253, 262 |
| Sau96I | GGNCC | 1 cut(s) | 287 |
| SetI | ASST | 4 cut(s) | 28, 70, 129, 179 |
| SfaNI | GCATC | 2 cut(s) | 4, 192 |
| Sse9I | AATT | 1 cut(s) | 301 |
| SsiI | CCGC | 2 cut(s) | 53, 154 |
| SspMI | CTAG | 2 cut(s) | 27, 270 |
| StyI | CCWWGG | 2 cut(s) | 87, 290 |
| TaaI | ACNGT | 1 cut(s) | 136 |
| TaqI | TCGA | 2 cut(s) | 210, 265 |
| TasI | AATT | 1 cut(s) | 301 |
| Tru1I | TTAA | 1 cut(s) | 300 |
| Tru9I | TTAA | 1 cut(s) | 300 |
| TseI | GCWGC | 1 cut(s) | 23 |
| TspGWI | ACGGA | 1 cut(s) | 72 |
| Tth111I | GACNNNGTC | 2 cut(s) | 96, 233 |
| XceI | RCATGY | 1 cut(s) | 172 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 16 |
| XmiI | GTMKAC | 1 cut(s) | 146 |
| XspI | CTAG | 2 cut(s) | 27, 270 |