Rmu_sc0001074.1_g000019

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001074.1
OG0000308
Physical Location & Seq
Forward (+)
114668 .. 115938
1271 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001074.1_g000019.1.cds

Sequence Viewer

Length: 1068 bp
atggcctctgttgatgcaatggcagcaagacttgcctcctccctcgctattgcagatgggaagcggcctgttgacctgcgtccgtccaagggattgagacaaccagaggttttcatgcttgggaagttactgactgccagggattatacacgccggtctttcatggggatgttcagatctgcgtggaggattaatggcactcttcgtgtcgacgaggcgggagaagatgatcatgttctgttttctttttcggatccaatcgacagggctagggtttggaagggcggtccgtggggtttcaatcgagccccgatagagctggccgagtatgatggagtgagccctgtgatgtcagtgtcgctgcagaagtcatcgtactggatgacgttactgggtgttcctccggcgtttaggtcagaaagaatcatgcgtctcataggcagcacaatcggggagtttatggagtttgaccggacagctttcgggactagattcaaatacgacaagttatttggtcggtgtacccgctgtgggctggttactcatgtgggattgccatgctccgggccggagttgctggaagatgatcagggaccagtagggacagtggagcctccatcagccttggcggtgttgcgtggtgggctagaaccaagtgcaactgcacctagggttttggcaaatggccaaaccatagttttcatagcccaggttcctcgagctattccagaagtcctcctgccgcagaatgctgtgaacatgcaccaagttaaaaggccaatgcagattagggaacttgaggagccacgacaggaggtactagccattacaggggtgcgtcgtcaccacgaaggagaggaggtactcatctctcataagaagcttcgtctcagtttggctataggtaaaaaaaaagtagatgcagaaaaaaaaatggtcaaaaagaatgaggaccaaggtaagcagaacaagaggaacaacaagaagaccaacctgatgccgaggttgttagctgctgaagatggagctaattccaaccctaaggggaagttgttggctcttatctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

355

Amino Acids

39.39

Weight (kDa)

9.79

Isoelectric Point (pI)

46.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 84
AccI GTMKAC 1 cut(s) 210
AciI CCGC 6 cut(s) 64, 218, 285, 526, 629, 743
AclWI GGATC 2 cut(s) 248, 261
AcoI YGGCCR 2 cut(s) 321, 685
AcuI CTGAAG 1 cut(s) 1038
AfaI GTAC 4 cut(s) 377, 523, 819, 864
AfiI CCNNNNNNNGG 4 cut(s) 89, 531, 563, 831
AgsI TTSAA 2 cut(s) 301, 496
AjnI CCWGG 2 cut(s) 137, 708
AluBI AGCT 6 cut(s) 319, 479, 722, 883, 1013, 1028
AluI AGCT 6 cut(s) 319, 479, 722, 883, 1013, 1028
Alw26I GTCTC 3 cut(s) 91, 437, 893
AlwI GGATC 2 cut(s) 248, 261
Ama87I CYCGRG 1 cut(s) 717
AoxI GGCC 6 cut(s) 3, 65, 321, 566, 685, 776
ApeKI GCWGC 4 cut(s) 23, 361, 441, 1013
ArsI GACNNNNNNTTYG 2 cut(s) 494, 526
AseI ATTAAT 1 cut(s) 192
AspA2I CCTAGG 1 cut(s) 668
AspS9I GGNCC 4 cut(s) 287, 566, 593, 952
AsuC2I CCSGG 1 cut(s) 565
AsuHPI GGTGA 1 cut(s) 836
AvaI CYCGRG 1 cut(s) 717
AvaII GGWCC 3 cut(s) 287, 593, 952
AvrII CCTAGG 1 cut(s) 668
AxyI CCTNAGG 1 cut(s) 1041
BalI TGGCCA 1 cut(s) 687
BamHI GGATCC 1 cut(s) 253
BanII GRGCYC 2 cut(s) 310, 344
BarI GAAGNNNNNNTAC 2 cut(s) 359, 391
BbsI GAAGAC 1 cut(s) 992
BbvI GCAGC 4 cut(s) 35, 348, 453, 1000
BccI CCATC 4 cut(s) 50, 326, 625, 1016
BcgI CGANNNNNNTGC 2 cut(s) 430, 464
BciT130I CCWGG 2 cut(s) 139, 710
BclI TGATCA 2 cut(s) 229, 586
BcnI CCSGG 1 cut(s) 565
BcoDI GTCTC 3 cut(s) 91, 437, 893
BfaI CTAG 6 cut(s) 270, 489, 647, 669, 821, 1066
BfmI CTRYAG 2 cut(s) 362, 900
BfuAI ACCTGC 1 cut(s) 84
BglII AGATCT 1 cut(s) 176
BisI GCNGC 6 cut(s) 24, 65, 362, 442, 743, 1014
BlnI CCTAGG 1 cut(s) 668
BlsI GCNGC 6 cut(s) 25, 66, 363, 443, 744, 1015
Bme1390I CCNGG 3 cut(s) 139, 565, 710
Bme18I GGWCC 3 cut(s) 287, 593, 952
BmeT110I CYCGRG 1 cut(s) 717
BmgT120I GGNCC 4 cut(s) 287, 566, 593, 952
BmiI GGNNCC 5 cut(s) 255, 594, 612, 714, 804
BmrFI CCNGG 3 cut(s) 139, 565, 710
BmrI ACTGGG 1 cut(s) 401
BmsI GCATC 3 cut(s) 4, 910, 987
BmuI ACTGGG 1 cut(s) 401
BoxI GACNNNNGTC 1 cut(s) 78
BpiI GAAGAC 1 cut(s) 992
BpuEI CTTGAG 1 cut(s) 818
BpuMI CCSGG 1 cut(s) 565
BsaJI CCNNGG 8 cut(s) 87, 138, 290, 624, 668, 708, 955, 1001
BsaWI WCCGGW 1 cut(s) 471
BsaXI ACNNNNNCTCC 2 cut(s) 846, 876
Bsc4I CCNNNNNNNGG 4 cut(s) 89, 531, 563, 831
Bse118I RCCGGY 1 cut(s) 153
Bse1I ACTGG 3 cut(s) 383, 396, 596
Bse21I CCTNAGG 1 cut(s) 1041
Bse3DI GCAATG 1 cut(s) 24
BseBI CCWGG 2 cut(s) 139, 710
BseDI CCNNGG 8 cut(s) 87, 138, 290, 624, 668, 708, 955, 1001
BseGI GGATG 2 cut(s) 174, 387
BseLI CCNNNNNNNGG 4 cut(s) 89, 531, 563, 831
BseMI GCAATG 1 cut(s) 24
BseMII CTCAG 1 cut(s) 904
BseNI ACTGG 3 cut(s) 383, 396, 596
BseRI GAGGAG 3 cut(s) 28, 815, 872
BseXI GCAGC 4 cut(s) 35, 348, 453, 1000
BsgI GTGCAG 1 cut(s) 648
BshFI GGCC 6 cut(s) 5, 67, 323, 568, 687, 778
BsiHKCI CYCGRG 1 cut(s) 717
BsiSI CCGG 5 cut(s) 154, 404, 472, 564, 569
BslFI GGGAC 3 cut(s) 499, 606, 616
BslI CCNNNNNNNGG 4 cut(s) 89, 531, 563, 831
BsmAI GTCTC 3 cut(s) 91, 437, 893
BsmBI CGTCTC 2 cut(s) 437, 893
BsmFI GGGAC 3 cut(s) 499, 606, 616
BsmI GAATGC 1 cut(s) 754
BsnI GGCC 6 cut(s) 5, 67, 323, 568, 687, 778
BsoBI CYCGRG 1 cut(s) 717
Bsp1286I GDGCHC 2 cut(s) 310, 344
Bsp143I GATC 4 cut(s) 176, 229, 253, 586
BspACI CCGC 6 cut(s) 64, 218, 285, 526, 629, 743
BspANI GGCC 6 cut(s) 5, 67, 323, 568, 687, 778
BspCNI CTCAG 1 cut(s) 903
BspLI GGNNCC 5 cut(s) 255, 594, 612, 714, 804
BspMAI CTGCAG 1 cut(s) 366
BspMI ACCTGC 1 cut(s) 84
BspPI GGATC 2 cut(s) 248, 261
BsrDI GCAATG 1 cut(s) 24
BsrFI RCCGGY 1 cut(s) 153
BsrI ACTGG 3 cut(s) 383, 396, 596
BssAI RCCGGY 1 cut(s) 153
BssECI CCNNGG 8 cut(s) 87, 138, 290, 624, 668, 708, 955, 1001
BssMI GATC 4 cut(s) 176, 229, 253, 586
BssT1I CCWWGG 4 cut(s) 87, 624, 668, 955
Bst2UI CCWGG 2 cut(s) 139, 710
Bst4CI ACNGT 1 cut(s) 607
Bst6I CTCTTC 1 cut(s) 207
BstAPI GCANNNNNTGC 1 cut(s) 32
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 2 cut(s) 890, 1041
BstDSI CCRYGG 1 cut(s) 290
BstF5I GGATG 2 cut(s) 174, 387
BstKTI GATC 4 cut(s) 179, 232, 256, 589
BstMAI GTCTC 3 cut(s) 91, 437, 893
BstMBI GATC 4 cut(s) 176, 229, 253, 586
BstMWI GCNNNNNNNGC 4 cut(s) 23, 32, 574, 643
BstNI CCWGG 2 cut(s) 139, 710
BstNSI RCATGY 1 cut(s) 763
BstPAI GACNNNNGTC 1 cut(s) 78
BstSCI CCNGG 3 cut(s) 137, 563, 708
BstSFI CTRYAG 2 cut(s) 362, 900
BstV1I GCAGC 4 cut(s) 35, 348, 453, 1000
BstV2I GAAGAC 1 cut(s) 992
BstX2I RGATCY 2 cut(s) 176, 253
BstYI RGATCY 2 cut(s) 176, 253
Bsu36I CCTNAGG 1 cut(s) 1041
BsuRI GGCC 6 cut(s) 5, 67, 323, 568, 687, 778
BtgI CCRYGG 1 cut(s) 290
BtsCI GGATG 2 cut(s) 174, 387
BtsIMutI CAGTG 2 cut(s) 360, 612
BveI ACCTGC 1 cut(s) 84
Cac8I GCNNGC 1 cut(s) 321
Cfr10I RCCGGY 1 cut(s) 153
Cfr13I GGNCC 4 cut(s) 287, 566, 593, 952
CpoI CGGWCCG 1 cut(s) 287
CseI GACGC 3 cut(s) 68, 419, 827
Csp6I GTAC 4 cut(s) 376, 522, 818, 863
CspI CGGWCCG 1 cut(s) 287
CviAII CATG 7 cut(s) 115, 163, 233, 427, 545, 558, 760
CviQI GTAC 4 cut(s) 376, 522, 818, 863
DdeI CTNAG 2 cut(s) 890, 1041
DpnI GATC 4 cut(s) 178, 231, 255, 588
DpnII GATC 4 cut(s) 176, 229, 253, 586
EaeI YGGCCR 2 cut(s) 321, 685
Eam1104I CTCTTC 1 cut(s) 207
EarI CTCTTC 1 cut(s) 207
Eco130I CCWWGG 4 cut(s) 87, 624, 668, 955
Eco24I GRGCYC 2 cut(s) 310, 344
Eco47I GGWCC 3 cut(s) 287, 593, 952
Eco57I CTGAAG 1 cut(s) 1038
Eco81I CCTNAGG 1 cut(s) 1041
Eco88I CYCGRG 1 cut(s) 717
EcoRII CCWGG 2 cut(s) 137, 708
EcoT14I CCWWGG 4 cut(s) 87, 624, 668, 955
EcoT38I GRGCYC 2 cut(s) 310, 344
ErhI CCWWGG 4 cut(s) 87, 624, 668, 955
Esp3I CGTCTC 2 cut(s) 437, 893
FaeI CATG 7 cut(s) 118, 166, 236, 430, 548, 561, 763
FaqI GGGAC 3 cut(s) 499, 606, 616
FatI CATG 7 cut(s) 114, 162, 232, 426, 544, 557, 759
FauI CCCGC 2 cut(s) 211, 533
FbaI TGATCA 2 cut(s) 229, 586
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 6 cut(s) 24, 65, 362, 442, 743, 1014
FokI GGATG 2 cut(s) 181, 394
FriOI GRGCYC 2 cut(s) 310, 344
Fsp4HI GCNGC 6 cut(s) 24, 65, 362, 442, 743, 1014
FspBI CTAG 6 cut(s) 270, 489, 647, 669, 821, 1066
GluI GCNGC 6 cut(s) 24, 65, 362, 442, 743, 1014
HaeIII GGCC 6 cut(s) 5, 67, 323, 568, 687, 778
HapII CCGG 5 cut(s) 154, 404, 472, 564, 569
HgaI GACGC 3 cut(s) 68, 419, 827
Hin1II CATG 7 cut(s) 118, 166, 236, 430, 548, 561, 763
HincII GTYRAC 2 cut(s) 73, 211
HindII GTYRAC 2 cut(s) 73, 211
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 2 cut(s) 423, 492
HpaII CCGG 5 cut(s) 154, 404, 472, 564, 569
HphI GGTGA 1 cut(s) 836
Hpy166II GTNNAC 4 cut(s) 73, 211, 522, 757
Hpy188I TCNGA 3 cut(s) 176, 253, 418
Hpy188III TCNNGA 2 cut(s) 484, 728
Hpy8I GTNNAC 4 cut(s) 73, 211, 522, 757
Hpy99I CGWCG 2 cut(s) 215, 843
HpyAV CCTTC 2 cut(s) 274, 845
HpyCH4III ACNGT 1 cut(s) 607
HpyCH4IV ACGT 1 cut(s) 386
HpyCH4V TGCA 8 cut(s) 17, 53, 364, 659, 665, 763, 784, 923
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 32, 574, 643
HpyF3I CTNAG 2 cut(s) 890, 1041
HpySE526I ACGT 1 cut(s) 386
Hsp92II CATG 7 cut(s) 118, 166, 236, 430, 548, 561, 763
Ksp22I TGATCA 2 cut(s) 229, 586
Kzo9I GATC 4 cut(s) 176, 229, 253, 586
LmnI GCTCC 4 cut(s) 566, 610, 802, 1025
Lsp1109I GCAGC 4 cut(s) 35, 348, 453, 1000
LweI GCATC 3 cut(s) 4, 910, 987
MaeI CTAG 6 cut(s) 270, 489, 647, 669, 821, 1066
MaeII ACGT 1 cut(s) 386
MaeIII GTNAC 4 cut(s) 126, 387, 538, 842
MalI GATC 4 cut(s) 178, 231, 255, 588
MboI GATC 4 cut(s) 176, 229, 253, 586
MboII GAAGA 5 cut(s) 194, 236, 593, 997, 1031
MflI RGATCY 2 cut(s) 176, 253
MhlI GDGCHC 2 cut(s) 310, 344
MlsI TGGCCA 1 cut(s) 687
MluCI AATT 1 cut(s) 1030
MluNI TGGCCA 1 cut(s) 687
MmeI TCCRAC 1 cut(s) 1059
Mox20I TGGCCA 1 cut(s) 687
MscI TGGCCA 1 cut(s) 687
MseI TTAA 2 cut(s) 192, 771
MslI CAYNNNNRTG 1 cut(s) 167
Msp20I TGGCCA 1 cut(s) 687
MspA1I CMGCKG 1 cut(s) 528
MspI CCGG 5 cut(s) 154, 404, 472, 564, 569
MspR9I CCNGG 3 cut(s) 139, 565, 710
Mva1269I GAATGC 1 cut(s) 754
MvaI CCWGG 2 cut(s) 139, 710
MwoI GCNNNNNNNGC 4 cut(s) 23, 32, 574, 643
NciI CCSGG 1 cut(s) 565
NdeII GATC 4 cut(s) 176, 229, 253, 586
NlaIII CATG 7 cut(s) 118, 166, 236, 430, 548, 561, 763
NlaIV GGNNCC 5 cut(s) 255, 594, 612, 714, 804
NmeAIII GCCGAG 2 cut(s) 349, 1026
NmuCI GTSAC 1 cut(s) 842
NspI RCATGY 1 cut(s) 763
PaeR7I CTCGAG 1 cut(s) 717
PctI GAATGC 1 cut(s) 754
PfeI GAWTC 2 cut(s) 423, 492
PkrI GCNGC 6 cut(s) 25, 66, 363, 443, 744, 1015
PshAI GACNNNNGTC 1 cut(s) 78
PshBI ATTAAT 1 cut(s) 192
Psp6I CCWGG 2 cut(s) 137, 708
PspGI CCWGG 2 cut(s) 137, 708
PspN4I GGNNCC 5 cut(s) 255, 594, 612, 714, 804
PspPI GGNCC 4 cut(s) 287, 566, 593, 952
PspXI VCTCGAGB 1 cut(s) 717
PstI CTGCAG 1 cut(s) 366
PsuI RGATCY 2 cut(s) 176, 253
RsaI GTAC 4 cut(s) 377, 523, 819, 864
RsaNI GTAC 4 cut(s) 376, 522, 818, 863
RseI CAYNNNNRTG 1 cut(s) 167
Rsr2I CGGWCCG 1 cut(s) 287
RsrII CGGWCCG 1 cut(s) 287
SalI GTCGAC 1 cut(s) 209
SaqAI TTAA 2 cut(s) 192, 771
SatI GCNGC 6 cut(s) 24, 65, 362, 442, 743, 1014
Sau3AI GATC 4 cut(s) 176, 229, 253, 586
Sau96I GGNCC 4 cut(s) 287, 566, 593, 952
ScrFI CCNGG 3 cut(s) 139, 565, 710
SduI GDGCHC 2 cut(s) 310, 344
SfaNI GCATC 3 cut(s) 4, 910, 987
SfcI CTRYAG 2 cut(s) 362, 900
Sfr274I CTCGAG 1 cut(s) 717
SinI GGWCC 3 cut(s) 287, 593, 952
SlaI CTCGAG 1 cut(s) 717
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 2 cut(s) 717, 797
SmoI CTYRAG 2 cut(s) 717, 797
Sse9I AATT 1 cut(s) 1030
SsiI CCGC 6 cut(s) 64, 218, 285, 526, 629, 743
SspMI CTAG 6 cut(s) 270, 489, 647, 669, 821, 1066
StyD4I CCNGG 3 cut(s) 137, 563, 708
StyI CCWWGG 4 cut(s) 87, 624, 668, 955
TaaI ACNGT 1 cut(s) 607
TaiI ACGT 1 cut(s) 389
TaqI TCGA 4 cut(s) 210, 261, 304, 718
TasI AATT 1 cut(s) 1030
TauI GCSGC 2 cut(s) 67, 745
TfiI GAWTC 2 cut(s) 423, 492
Tru1I TTAA 2 cut(s) 192, 771
Tru9I TTAA 2 cut(s) 192, 771
TscAI CASTG 2 cut(s) 360, 612
TseFI GTSAC 1 cut(s) 842
TseI GCWGC 4 cut(s) 23, 361, 441, 1013
Tsp45I GTSAC 1 cut(s) 842
TspDTI ATGAA 3 cut(s) 103, 151, 691
TspGWI ACGGA 2 cut(s) 72, 279
TspRI CASTG 2 cut(s) 360, 612
VpaK11BI GGWCC 3 cut(s) 287, 593, 952
VspI ATTAAT 1 cut(s) 192
XceI RCATGY 1 cut(s) 763
XhoI CTCGAG 1 cut(s) 717
XmaJI CCTAGG 1 cut(s) 668
XmiI GTMKAC 1 cut(s) 210
XspI CTAG 6 cut(s) 270, 489, 647, 669, 821, 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.