Rmu_sc0009916.1_g000015

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009916.1
OG0000308
Physical Location & Seq
Reverse (-)
56914 .. 58169
1256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009916.1_g000015.1.cds

Sequence Viewer

Length: 1152 bp
atgtcaatggcaattgatgcaatggcagactgcttggcctcctccctagcgctggctgatggaaagcaaccgatggacttgtgtccatcaaaaggattgagacaacctgaagcattcatggtagggaagctgctcacggcaagggaatattcccgtcgctctttccttggcatgtttcgatctgcatggagaatcaatggcagattgaatgttgaagaactcagagaagatgatagggtcttgttcactttcacagatccttctaatgtgtatagggtttggaaaagaggaccatggggatataaccgggctcctatagctttagcaccgtatgacggtgtccgtccgacaagggagataccactgaagaaatcatcccattggatgacattgcaaagagtgccaccggccttcatatttgaacgtagtatgcatctgattgggagtacactaggaaagttcatggaatttgatcgcccggcctttaggactcgagtcttgcgcatcagggttgagatcgattatgtcaaacctctcatgtttcttcgacgtttttgggtggaagatgaagtccagttcatggtgcagtttcgatatgacaagctgtttggcaggtgctgcacctgcagcctcgttacccatgttggccgcccttattcagggccagatatggtggaagaccgtgacatacctgttagtacggtggagcagtccaaggctttggccgtgttacggggacaggtcctaaagtcactaggacaagtgcagattacagaattgagtgaaccaagactcaatgaagatccaatcataggacaacgccgtagtagggaaaatgatgaggtaattatctctccaaaaaaattgtgtttaagtcttactattagaaagaaaaatttggatgcagtgactatgggcttgttggagggaccttcgaacaacaatgatcaacctaagagaacgagaggatgtcttgttggaagtgtgaacaagctaccatatggaacaacaagaaaaggaagaaagaaggatggagaacaagaaaagacaaagagcaaaaagaccaacctgatgccgaggttgttagctgctgatgagcctgaaacaagtactaactctaaccctaaggggaaagagaaagtgcttgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

383

Amino Acids

43.67

Weight (kDa)

9.76

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 603, 632
Acc16I TGCGCA 1 cut(s) 503
Acc36I ACCTGC 2 cut(s) 603, 632
AccB7I CCANNNNNTGG 1 cut(s) 580
AciI CCGC 1 cut(s) 649
AclWI GGATC 2 cut(s) 251, 797
AcoI YGGCCR 2 cut(s) 646, 723
AcsI RAATTY 2 cut(s) 467, 895
AcuI CTGAAG 2 cut(s) 129, 386
AfaI GTAC 3 cut(s) 448, 700, 1111
AfeI AGCGCT 1 cut(s) 51
AfiI CCNNNNNNNGG 8 cut(s) 52, 92, 335, 580, 659, 732, 812, 829
AgsI TTSAA 3 cut(s) 208, 215, 422
AluBI AGCT 5 cut(s) 130, 320, 604, 994, 1088
AluI AGCT 5 cut(s) 130, 320, 604, 994, 1088
Alw26I GTCTC 1 cut(s) 94
AlwI GGATC 2 cut(s) 251, 797
AlwNI CAGNNNCTG 1 cut(s) 618
Ama87I CYCGRG 1 cut(s) 492
Aor51HI AGCGCT 1 cut(s) 51
AoxI GGCC 6 cut(s) 36, 408, 480, 646, 662, 723
ApeKI GCWGC 4 cut(s) 130, 618, 627, 1088
ApoI RAATTY 2 cut(s) 467, 895
ArsI GACNNNNNNTTYG 2 cut(s) 590, 622
AspLEI GCGC 2 cut(s) 52, 504
AspS9I GGNCC 4 cut(s) 290, 662, 742, 929
AsuC2I CCSGG 2 cut(s) 308, 479
AsuII TTCGAA 1 cut(s) 935
AvaI CYCGRG 1 cut(s) 492
AvaII GGWCC 3 cut(s) 290, 742, 929
AxyI CCTNAGG 1 cut(s) 1125
BanII GRGCYC 1 cut(s) 313
BbsI GAAGAC 1 cut(s) 684
BbvI GCAGC 4 cut(s) 117, 605, 639, 1075
BccI CCATC 4 cut(s) 53, 67, 94, 1025
BceAI ACGGC 3 cut(s) 153, 710, 807
BclI TGATCA 1 cut(s) 946
BcnI CCSGG 2 cut(s) 308, 479
BcoDI GTCTC 1 cut(s) 94
BfaI CTAG 3 cut(s) 47, 452, 755
BfmI CTRYAG 2 cut(s) 315, 625
BfoI RGCGCY 1 cut(s) 53
BfuAI ACCTGC 2 cut(s) 603, 632
BisI GCNGC 5 cut(s) 131, 619, 628, 649, 1089
BlsI GCNGC 5 cut(s) 132, 620, 629, 650, 1090
BmcAI AGTACT 1 cut(s) 1111
Bme1390I CCNGG 2 cut(s) 308, 479
Bme18I GGWCC 3 cut(s) 290, 742, 929
BmeT110I CYCGRG 1 cut(s) 492
BmgT120I GGNCC 4 cut(s) 290, 662, 742, 929
BmiI GGNNCC 2 cut(s) 312, 930
BmrFI CCNGG 2 cut(s) 308, 479
BmsI GCATC 5 cut(s) 7, 442, 513, 892, 1062
BoxI GACNNNNGTC 2 cut(s) 81, 494
BpiI GAAGAC 1 cut(s) 684
Bpu14I TTCGAA 1 cut(s) 935
BpuMI CCSGG 2 cut(s) 308, 479
Bsa29I ATCGAT 1 cut(s) 519
BsaJI CCNNGG 4 cut(s) 166, 293, 714, 1076
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 92, 335, 580, 659, 732, 812, 829
Bse118I RCCGGY 1 cut(s) 406
Bse1I ACTGG 1 cut(s) 574
Bse21I CCTNAGG 1 cut(s) 1125
Bse3DI GCAATG 2 cut(s) 27, 389
BseCI ATCGAT 1 cut(s) 519
BseDI CCNNGG 4 cut(s) 166, 293, 714, 1076
BseGI GGATG 5 cut(s) 374, 390, 907, 974, 1036
BseLI CCNNNNNNNGG 8 cut(s) 52, 92, 335, 580, 659, 732, 812, 829
BseMI GCAATG 2 cut(s) 27, 389
BseMII CTCAG 1 cut(s) 235
BseNI ACTGG 1 cut(s) 574
BseRI GAGGAG 1 cut(s) 31
BseXI GCAGC 4 cut(s) 117, 605, 639, 1075
BsgI GTGCAG 3 cut(s) 604, 605, 785
BshFI GGCC 6 cut(s) 38, 410, 482, 648, 664, 725
BshVI ATCGAT 1 cut(s) 519
BsiHKCI CYCGRG 1 cut(s) 492
BsiSI CCGG 3 cut(s) 307, 407, 479
BslFI GGGAC 2 cut(s) 750, 942
BslI CCNNNNNNNGG 8 cut(s) 52, 92, 335, 580, 659, 732, 812, 829
BsmAI GTCTC 1 cut(s) 94
BsmFI GGGAC 2 cut(s) 750, 942
BsmI GAATGC 1 cut(s) 113
BsnI GGCC 6 cut(s) 38, 410, 482, 648, 664, 725
BsoBI CYCGRG 1 cut(s) 492
Bsp119I TTCGAA 1 cut(s) 935
Bsp1286I GDGCHC 1 cut(s) 313
Bsp143I GATC 6 cut(s) 179, 256, 472, 516, 802, 946
Bsp19I CCATGG 1 cut(s) 293
BspACI CCGC 1 cut(s) 649
BspANI GGCC 6 cut(s) 38, 410, 482, 648, 664, 725
BspCNI CTCAG 1 cut(s) 234
BspDI ATCGAT 1 cut(s) 519
BspLI GGNNCC 2 cut(s) 312, 930
BspMAI CTGCAG 1 cut(s) 629
BspMI ACCTGC 2 cut(s) 603, 632
BspPI GGATC 2 cut(s) 251, 797
BspT104I TTCGAA 1 cut(s) 935
BsrDI GCAATG 2 cut(s) 27, 389
BsrFI RCCGGY 1 cut(s) 406
BsrI ACTGG 1 cut(s) 574
BssAI RCCGGY 1 cut(s) 406
BssECI CCNNGG 4 cut(s) 166, 293, 714, 1076
BssMI GATC 6 cut(s) 179, 256, 472, 516, 802, 946
BssT1I CCWWGG 3 cut(s) 166, 293, 714
Bst4CI ACNGT 4 cut(s) 330, 338, 683, 703
BstAPI GCANNNNNTGC 3 cut(s) 17, 400, 618
BstBI TTCGAA 1 cut(s) 935
BstC8I GCNNGC 2 cut(s) 54, 1146
BstDEI CTNAG 3 cut(s) 221, 954, 1125
BstDSI CCRYGG 1 cut(s) 293
BstENI CCTNNNNNAGG 1 cut(s) 657
BstF5I GGATG 5 cut(s) 374, 390, 907, 974, 1036
BstH2I RGCGCY 1 cut(s) 53
BstHHI GCGC 2 cut(s) 52, 504
BstKTI GATC 6 cut(s) 182, 259, 475, 519, 805, 949
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 6 cut(s) 179, 256, 472, 516, 802, 946
BstMWI GCNNNNNNNGC 6 cut(s) 17, 317, 400, 618, 624, 627
BstNSI RCATGY 1 cut(s) 175
BstPAI GACNNNNGTC 2 cut(s) 81, 494
BstSCI CCNGG 2 cut(s) 306, 477
BstSFI CTRYAG 2 cut(s) 315, 625
BstV1I GCAGC 4 cut(s) 117, 605, 639, 1075
BstV2I GAAGAC 1 cut(s) 684
BstX2I RGATCY 2 cut(s) 256, 802
BstXI CCANNNNNNTGG 1 cut(s) 721
BstYI RGATCY 2 cut(s) 256, 802
Bsu15I ATCGAT 1 cut(s) 519
Bsu36I CCTNAGG 1 cut(s) 1125
BsuRI GGCC 6 cut(s) 38, 410, 482, 648, 664, 725
BsuTUI ATCGAT 1 cut(s) 519
BtgI CCRYGG 1 cut(s) 293
BtsCI GGATG 5 cut(s) 374, 390, 907, 974, 1036
BtsI GCAGTG 1 cut(s) 912
BtsIMutI CAGTG 2 cut(s) 362, 912
BveI ACCTGC 2 cut(s) 603, 632
Cac8I GCNNGC 2 cut(s) 54, 1146
CaiI CAGNNNCTG 1 cut(s) 618
CfoI GCGC 2 cut(s) 52, 504
Cfr10I RCCGGY 1 cut(s) 406
Cfr13I GGNCC 4 cut(s) 290, 662, 742, 929
ClaI ATCGAT 1 cut(s) 519
Csp6I GTAC 3 cut(s) 447, 699, 1110
CviAII CATG 8 cut(s) 118, 172, 186, 294, 463, 538, 580, 641
CviQI GTAC 3 cut(s) 447, 699, 1110
DdeI CTNAG 3 cut(s) 221, 954, 1125
DpnI GATC 6 cut(s) 181, 258, 474, 518, 804, 948
DpnII GATC 6 cut(s) 179, 256, 472, 516, 802, 946
EaeI YGGCCR 2 cut(s) 646, 723
Eco130I CCWWGG 3 cut(s) 166, 293, 714
Eco24I GRGCYC 1 cut(s) 313
Eco47I GGWCC 3 cut(s) 290, 742, 929
Eco47III AGCGCT 1 cut(s) 51
Eco57I CTGAAG 2 cut(s) 129, 386
Eco81I CCTNAGG 1 cut(s) 1125
Eco88I CYCGRG 1 cut(s) 492
EcoNI CCTNNNNNAGG 1 cut(s) 657
EcoO109I RGGNCCY 2 cut(s) 742, 929
EcoT14I CCWWGG 3 cut(s) 166, 293, 714
EcoT22I ATGCAT 1 cut(s) 435
EcoT38I GRGCYC 1 cut(s) 313
ErhI CCWWGG 3 cut(s) 166, 293, 714
FaeI CATG 8 cut(s) 121, 175, 189, 297, 466, 541, 583, 644
FaqI GGGAC 2 cut(s) 750, 942
FatI CATG 8 cut(s) 117, 171, 185, 293, 462, 537, 579, 640
FauNDI CATATG 1 cut(s) 1000
FbaI TGATCA 1 cut(s) 946
Fnu4HI GCNGC 5 cut(s) 131, 619, 628, 649, 1089
FokI GGATG 5 cut(s) 361, 397, 914, 981, 1043
FriOI GRGCYC 1 cut(s) 313
Fsp4HI GCNGC 5 cut(s) 131, 619, 628, 649, 1089
FspBI CTAG 3 cut(s) 47, 452, 755
FspI TGCGCA 1 cut(s) 503
GlaI GCGC 2 cut(s) 51, 503
GluI GCNGC 5 cut(s) 131, 619, 628, 649, 1089
HaeII RGCGCY 1 cut(s) 53
HaeIII GGCC 6 cut(s) 38, 410, 482, 648, 664, 725
HapII CCGG 3 cut(s) 307, 407, 479
HhaI GCGC 2 cut(s) 52, 504
Hin1II CATG 8 cut(s) 121, 175, 189, 297, 466, 541, 583, 644
Hin6I GCGC 2 cut(s) 50, 502
HinP1I GCGC 2 cut(s) 50, 502
HinfI GANTC 4 cut(s) 192, 490, 495, 792
HpaII CCGG 3 cut(s) 307, 407, 479
Hpy166II GTNNAC 4 cut(s) 246, 449, 785, 988
Hpy188I TCNGA 3 cut(s) 224, 348, 438
Hpy8I GTNNAC 4 cut(s) 246, 449, 785, 988
Hpy99I CGWCG 2 cut(s) 159, 552
HpyAV CCTTC 4 cut(s) 270, 421, 942, 1021
HpyCH4III ACNGT 4 cut(s) 330, 338, 683, 703
HpyCH4IV ACGT 2 cut(s) 424, 550
HpyCH4V TGCA 9 cut(s) 20, 185, 394, 433, 586, 621, 627, 766, 905
HpyF10VI GCNNNNNNNGC 6 cut(s) 17, 317, 400, 618, 624, 627
HpyF3I CTNAG 3 cut(s) 221, 954, 1125
HpySE526I ACGT 2 cut(s) 424, 550
Hsp92II CATG 8 cut(s) 121, 175, 189, 297, 466, 541, 583, 644
HspAI GCGC 2 cut(s) 50, 502
Ksp22I TGATCA 1 cut(s) 946
Kzo9I GATC 6 cut(s) 179, 256, 472, 516, 802, 946
LmnI GCTCC 2 cut(s) 316, 706
Lsp1109I GCAGC 4 cut(s) 117, 605, 639, 1075
LweI GCATC 5 cut(s) 7, 442, 513, 892, 1062
MaeI CTAG 3 cut(s) 47, 452, 755
MaeII ACGT 2 cut(s) 424, 550
MaeIII GTNAC 5 cut(s) 634, 683, 729, 750, 907
MalI GATC 6 cut(s) 181, 258, 474, 518, 804, 948
MboI GATC 6 cut(s) 179, 256, 472, 516, 802, 946
MboII GAAGA 8 cut(s) 227, 239, 379, 536, 575, 689, 812, 1032
MfeI CAATTG 1 cut(s) 12
MflI RGATCY 2 cut(s) 256, 802
MhlI GDGCHC 1 cut(s) 313
MluCI AATT 6 cut(s) 12, 467, 776, 846, 863, 895
MlyI GAGTC 3 cut(s) 484, 504, 786
MmeI TCCRAC 3 cut(s) 371, 903, 958
MnlI CCTC 9 cut(s) 49, 52, 281, 543, 641, 835, 919, 959, 1071
Mph1103I ATGCAT 1 cut(s) 435
MseI TTAA 2 cut(s) 872, 1150
MspI CCGG 3 cut(s) 307, 407, 479
MspR9I CCNGG 2 cut(s) 308, 479
MunI CAATTG 1 cut(s) 12
Mva1269I GAATGC 1 cut(s) 113
MwoI GCNNNNNNNGC 6 cut(s) 17, 317, 400, 618, 624, 627
NciI CCSGG 2 cut(s) 308, 479
NcoI CCATGG 1 cut(s) 293
NdeI CATATG 1 cut(s) 1000
NdeII GATC 6 cut(s) 179, 256, 472, 516, 802, 946
NlaIII CATG 8 cut(s) 121, 175, 189, 297, 466, 541, 583, 644
NlaIV GGNNCC 2 cut(s) 312, 930
NmeAIII GCCGAG 1 cut(s) 1101
NmuCI GTSAC 3 cut(s) 683, 750, 907
NsbI TGCGCA 1 cut(s) 503
NsiI ATGCAT 1 cut(s) 435
NspI RCATGY 1 cut(s) 175
NspV TTCGAA 1 cut(s) 935
PaeR7I CTCGAG 1 cut(s) 492
PaqCI CACCTGC 2 cut(s) 603, 632
PctI GAATGC 1 cut(s) 113
PfeI GAWTC 1 cut(s) 192
PflFI GACNNNGTC 1 cut(s) 338
PflMI CCANNNNNTGG 1 cut(s) 580
PkrI GCNGC 5 cut(s) 132, 620, 629, 650, 1090
PleI GAGTC 3 cut(s) 484, 503, 786
PpsI GAGTC 3 cut(s) 484, 503, 786
PpuMI RGGWCCY 2 cut(s) 742, 929
PshAI GACNNNNGTC 2 cut(s) 81, 494
Psp5II RGGWCCY 2 cut(s) 742, 929
PspN4I GGNNCC 2 cut(s) 312, 930
PspPI GGNCC 4 cut(s) 290, 662, 742, 929
PspPPI RGGWCCY 2 cut(s) 742, 929
PspXI VCTCGAGB 1 cut(s) 492
PstI CTGCAG 1 cut(s) 629
PstNI CAGNNNCTG 1 cut(s) 618
PsuI RGATCY 2 cut(s) 256, 802
PsyI GACNNNGTC 1 cut(s) 338
RsaI GTAC 3 cut(s) 448, 700, 1111
RsaNI GTAC 3 cut(s) 447, 699, 1110
SaqAI TTAA 2 cut(s) 872, 1150
SatI GCNGC 5 cut(s) 131, 619, 628, 649, 1089
Sau3AI GATC 6 cut(s) 179, 256, 472, 516, 802, 946
Sau96I GGNCC 4 cut(s) 290, 662, 742, 929
ScaI AGTACT 1 cut(s) 1111
SchI GAGTC 3 cut(s) 484, 504, 786
ScrFI CCNGG 2 cut(s) 308, 479
SduI GDGCHC 1 cut(s) 313
SfaNI GCATC 5 cut(s) 7, 442, 513, 892, 1062
SfcI CTRYAG 2 cut(s) 315, 625
Sfr274I CTCGAG 1 cut(s) 492
SfuI TTCGAA 1 cut(s) 935
SinI GGWCC 3 cut(s) 290, 742, 929
SlaI CTCGAG 1 cut(s) 492
SmlI CTYRAG 1 cut(s) 492
SmoI CTYRAG 1 cut(s) 492
Sse9I AATT 6 cut(s) 12, 467, 776, 846, 863, 895
SsiI CCGC 1 cut(s) 649
SspI AATATT 1 cut(s) 149
SspMI CTAG 3 cut(s) 47, 452, 755
StyD4I CCNGG 2 cut(s) 306, 477
StyI CCWWGG 3 cut(s) 166, 293, 714
TaaI ACNGT 4 cut(s) 330, 338, 683, 703
TaiI ACGT 2 cut(s) 427, 553
TaqI TCGA 6 cut(s) 178, 493, 519, 547, 592, 935
TasI AATT 6 cut(s) 12, 467, 776, 846, 863, 895
TatI WGTACW 2 cut(s) 446, 1109
TauI GCSGC 1 cut(s) 651
TfiI GAWTC 1 cut(s) 192
Tru1I TTAA 2 cut(s) 872, 1150
Tru9I TTAA 2 cut(s) 872, 1150
TscAI CASTG 2 cut(s) 369, 912
TseFI GTSAC 3 cut(s) 683, 750, 907
TseI GCWGC 4 cut(s) 130, 618, 627, 1088
Tsp45I GTSAC 3 cut(s) 683, 750, 907
TspDTI ATGAA 6 cut(s) 106, 403, 451, 568, 582, 813
TspGWI ACGGA 1 cut(s) 332
TspRI CASTG 2 cut(s) 369, 912
Tth111I GACNNNGTC 1 cut(s) 338
Van91I CCANNNNNTGG 1 cut(s) 580
VpaK11BI GGWCC 3 cut(s) 290, 742, 929
XagI CCTNNNNNAGG 1 cut(s) 657
XapI RAATTY 2 cut(s) 467, 895
XceI RCATGY 1 cut(s) 175
XhoI CTCGAG 1 cut(s) 492
XspI CTAG 3 cut(s) 47, 452, 755
ZrmI AGTACT 1 cut(s) 1111
Zsp2I ATGCAT 1 cut(s) 435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.