Rmu_sc0035307.1_g000001

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0035307.1
OG0000308
Physical Location & Seq
Forward (+)
143 .. 1390
1248 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0035307.1_g000001.1.cds

Sequence Viewer

Length: 1104 bp
atggcctctgttgatgcaatggcagcaagacttgcctcctcccttgctattgcagaagggaaacgacatgttgacttgcgtccatccaagggactgcgacaaccagaagttttcatgcttggaaaactattgactggaagggagtatacacgccggtcattcatgggaatgttcaaatctgcgtggagggttaatggcacccttcgtgtcgaagaagctggagaagatgatcggggtttcaatcgagctccgatcgctttggcggagtatgatggagtgagcccgatgctgtcaataccgctgcaaaagtcatcgtattggatgaagttgattggagttcctccgacgtttagatccgaaaggattatacgtctgataggcagcacgatcggggagtacatggagttcgaccggacggctttccagaccagggtgctacgtatccgagtggagatcgcctataagactccatttcgttatggtttcgttacccatgtaggattgccatgctccgggcctgagttgatggaggacgagcagggaccattggggacggtggagtcaccgtcagccttggcagtgctgtgtggagggccagacacaagtgctactacaactagggttttggcaaatggccaaaccctagtcttccaggacaaggtgccccggtccattcctgaagcttttctgcctcaacaggtggtgaatatgcgtcgggctagaaggcaggtgcagatcagggagcttgaggagccacggcaggaggcaccacccatcacgggggtgcgtcgtcatagagaaggtgatgaggtaaccatctcccctaaaaagcttcgtctcagtttggctgtgggtaagaaaactctagatgcaatgactatgggccttattgaagcacctgttggtgctcctgagcaaccaaagagaaagtgtggtcgtcttgtaggaagtctcaacaaaatgttgtatggtactgtaggaaagagtaaaatggttaagaaggatgatgaccaaggtaagaagaccaacccgatgccgaggttgttagctgctgcagatggagttaattccgaccctaaggggaaggagttggcccttgtctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

367

Amino Acids

40.52

Weight (kDa)

9.83

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 718
AasI GACNNNNNNGTC 1 cut(s) 559
Acc36I ACCTGC 1 cut(s) 718
AccB1I GGYRCC 3 cut(s) 197, 661, 766
AccI GTMKAC 1 cut(s) 146
AciI CCGC 2 cut(s) 263, 299
AclWI GGATC 1 cut(s) 348
AcoI YGGCCR 1 cut(s) 634
AcuI CTGAAG 1 cut(s) 699
AfaI GTAC 2 cut(s) 398, 973
AfiI CCNNNNNNNGG 6 cut(s) 89, 430, 512, 658, 779, 780
AflIII ACRYGT 1 cut(s) 67
AgsI TTSAA 3 cut(s) 175, 241, 893
AjnI CCWGG 2 cut(s) 428, 651
AjuI GAANNNNNNNTTGG 2 cut(s) 885, 917
AleI CACNNNNGTG 1 cut(s) 782
AluBI AGCT 6 cut(s) 218, 248, 683, 745, 832, 1049
AluI AGCT 6 cut(s) 218, 248, 683, 745, 832, 1049
Alw21I GWGCWC 2 cut(s) 250, 910
Alw26I GTCTC 2 cut(s) 842, 956
AlwI GGATC 1 cut(s) 348
AoxI GGCC 6 cut(s) 3, 515, 593, 634, 883, 1092
ApeKI GCWGC 5 cut(s) 23, 301, 381, 1049, 1052
Asp700I GAANNNNTTC 1 cut(s) 684
AspS9I GGNCC 6 cut(s) 515, 542, 593, 669, 883, 1093
AsuC2I CCSGG 2 cut(s) 514, 667
AsuHPI GGTGA 3 cut(s) 555, 715, 815
AvaII GGWCC 2 cut(s) 542, 669
AxyI CCTNAGG 1 cut(s) 1077
BaeGI GKGCMC 1 cut(s) 666
BalI TGGCCA 1 cut(s) 636
BanI GGYRCC 3 cut(s) 197, 661, 766
BanII GRGCYC 2 cut(s) 250, 284
BarI GAAGNNNNNNTAC 2 cut(s) 130, 162
BbsI GAAGAC 2 cut(s) 640, 1028
Bbv12I GWGCWC 2 cut(s) 250, 910
BbvI GCAGC 5 cut(s) 35, 288, 393, 1036, 1039
BccI CCATC 6 cut(s) 91, 266, 520, 782, 824, 1052
BceAI ACGGC 2 cut(s) 432, 773
BcgI CGANNNNNNTGC 2 cut(s) 370, 404
BciT130I CCWGG 2 cut(s) 430, 653
BciVI GTATCC 1 cut(s) 452
BcnI CCSGG 2 cut(s) 514, 667
BcoDI GTCTC 2 cut(s) 842, 956
BfaI CTAG 5 cut(s) 618, 644, 720, 866, 1102
BfmI CTRYAG 2 cut(s) 975, 1053
BfuAI ACCTGC 1 cut(s) 718
BfuI GTATCC 1 cut(s) 452
BisI GCNGC 5 cut(s) 24, 302, 382, 1050, 1053
BlsI GCNGC 5 cut(s) 25, 303, 383, 1051, 1054
Bme1390I CCNGG 4 cut(s) 430, 514, 653, 667
Bme18I GGWCC 2 cut(s) 542, 669
BmgT120I GGNCC 6 cut(s) 515, 542, 593, 669, 883, 1093
BmiI GGNNCC 5 cut(s) 199, 543, 663, 753, 768
BmrFI CCNGG 4 cut(s) 430, 514, 653, 667
BmsI GCATC 4 cut(s) 4, 276, 859, 1023
BoxI GACNNNNGTC 1 cut(s) 78
BpiI GAAGAC 2 cut(s) 640, 1028
BpmI CTGGAG 1 cut(s) 240
Bpu10I CCTNAGC 1 cut(s) 912
BpuEI CTTGAG 1 cut(s) 767
BpuMI CCSGG 2 cut(s) 514, 667
BsaAI YACGTR 1 cut(s) 440
BsaJI CCNNGG 7 cut(s) 87, 429, 573, 665, 755, 1012, 1037
BsaWI WCCGGW 1 cut(s) 411
BsaXI ACNNNNNCTCC 2 cut(s) 551, 581
Bsc4I CCNNNNNNNGG 6 cut(s) 89, 430, 512, 658, 779, 780
Bse118I RCCGGY 1 cut(s) 153
Bse1I ACTGG 1 cut(s) 139
Bse21I CCTNAGG 1 cut(s) 1077
Bse3DI GCAATG 2 cut(s) 24, 879
BseBI CCWGG 2 cut(s) 430, 653
BseDI CCNNGG 7 cut(s) 87, 429, 573, 665, 755, 1012, 1037
BseGI GGATG 3 cut(s) 83, 327, 1009
BseLI CCNNNNNNNGG 6 cut(s) 89, 430, 512, 658, 779, 780
BseMI GCAATG 2 cut(s) 24, 879
BseMII CTCAG 3 cut(s) 510, 853, 903
BseNI ACTGG 1 cut(s) 139
BseRI GAGGAG 2 cut(s) 28, 764
BseSI GKGCMC 1 cut(s) 666
BseXI GCAGC 5 cut(s) 35, 288, 393, 1036, 1039
BsgI GTGCAG 1 cut(s) 752
Bsh1285I CGRYCG 3 cut(s) 255, 390, 412
BshFI GGCC 6 cut(s) 5, 517, 595, 636, 885, 1094
BshNI GGYRCC 3 cut(s) 197, 661, 766
BsiEI CGRYCG 3 cut(s) 255, 390, 412
BsiHKAI GWGCWC 2 cut(s) 250, 910
BsiSI CCGG 4 cut(s) 154, 412, 513, 667
BslFI GGGAC 3 cut(s) 105, 555, 565
BslI CCNNNNNNNGG 6 cut(s) 89, 430, 512, 658, 779, 780
BsmAI GTCTC 2 cut(s) 842, 956
BsmBI CGTCTC 1 cut(s) 842
BsmFI GGGAC 3 cut(s) 105, 555, 565
BsnI GGCC 6 cut(s) 5, 517, 595, 636, 885, 1094
Bsp1286I GDGCHC 4 cut(s) 250, 284, 666, 910
Bsp143I GATC 6 cut(s) 229, 252, 353, 387, 453, 735
BspACI CCGC 2 cut(s) 263, 299
BspANI GGCC 6 cut(s) 5, 517, 595, 636, 885, 1094
BspCNI CTCAG 3 cut(s) 511, 852, 904
BspLI GGNNCC 5 cut(s) 199, 543, 663, 753, 768
BspMAI CTGCAG 1 cut(s) 1057
BspMI ACCTGC 1 cut(s) 718
BspPI GGATC 1 cut(s) 348
BspT107I GGYRCC 3 cut(s) 197, 661, 766
BsrDI GCAATG 2 cut(s) 24, 879
BsrFI RCCGGY 1 cut(s) 153
BsrI ACTGG 1 cut(s) 139
BssAI RCCGGY 1 cut(s) 153
BssECI CCNNGG 7 cut(s) 87, 429, 573, 665, 755, 1012, 1037
BssMI GATC 6 cut(s) 229, 252, 353, 387, 453, 735
BssNAI GTATAC 1 cut(s) 147
BssT1I CCWWGG 3 cut(s) 87, 573, 1012
Bst1107I GTATAC 1 cut(s) 147
Bst2UI CCWGG 2 cut(s) 430, 653
Bst4CI ACNGT 3 cut(s) 556, 567, 976
BstAPI GCANNNNNTGC 1 cut(s) 32
BstBAI YACGTR 1 cut(s) 440
BstDEI CTNAG 4 cut(s) 519, 839, 912, 1077
BstDSI CCRYGG 1 cut(s) 755
BstEII GGTNACC 1 cut(s) 811
BstF5I GGATG 3 cut(s) 83, 327, 1009
BstKTI GATC 6 cut(s) 232, 255, 356, 390, 456, 738
BstMAI GTCTC 2 cut(s) 842, 956
BstMBI GATC 6 cut(s) 229, 252, 353, 387, 453, 735
BstMCI CGRYCG 3 cut(s) 255, 390, 412
BstMWI GCNNNNNNNGC 4 cut(s) 23, 32, 254, 751
BstNI CCWGG 2 cut(s) 430, 653
BstNSI RCATGY 1 cut(s) 71
BstPAI GACNNNNGTC 1 cut(s) 78
BstPI GGTNACC 1 cut(s) 811
BstSCI CCNGG 4 cut(s) 428, 512, 651, 665
BstSFI CTRYAG 2 cut(s) 975, 1053
BstSLI GKGCMC 1 cut(s) 666
BstSNI TACGTA 1 cut(s) 440
BstV1I GCAGC 5 cut(s) 35, 288, 393, 1036, 1039
BstV2I GAAGAC 2 cut(s) 640, 1028
BstX2I RGATCY 1 cut(s) 353
BstYI RGATCY 1 cut(s) 353
BstZ17I GTATAC 1 cut(s) 147
Bsu36I CCTNAGG 1 cut(s) 1077
BsuI GTATCC 1 cut(s) 452
BsuRI GGCC 6 cut(s) 5, 517, 595, 636, 885, 1094
BtgI CCRYGG 1 cut(s) 755
BtsCI GGATG 3 cut(s) 83, 327, 1009
BtsI GCAGTG 1 cut(s) 585
BtsIMutI CAGTG 1 cut(s) 585
BveI ACCTGC 1 cut(s) 718
Cfr10I RCCGGY 1 cut(s) 153
Cfr13I GGNCC 6 cut(s) 515, 542, 593, 669, 883, 1093
CseI GACGC 3 cut(s) 68, 701, 776
Csp6I GTAC 2 cut(s) 397, 972
CviAII CATG 6 cut(s) 68, 115, 163, 400, 494, 507
CviQI GTAC 2 cut(s) 397, 972
DdeI CTNAG 4 cut(s) 519, 839, 912, 1077
DpnI GATC 6 cut(s) 231, 254, 355, 389, 455, 737
DpnII GATC 6 cut(s) 229, 252, 353, 387, 453, 735
DrdI GACNNNNNNGTC 1 cut(s) 559
DseDI GACNNNNNNGTC 1 cut(s) 559
EaeI YGGCCR 1 cut(s) 634
EciI GGCGGA 1 cut(s) 278
Ecl136II GAGCTC 1 cut(s) 248
Eco105I TACGTA 1 cut(s) 440
Eco130I CCWWGG 3 cut(s) 87, 573, 1012
Eco24I GRGCYC 2 cut(s) 250, 284
Eco47I GGWCC 2 cut(s) 542, 669
Eco53kI GAGCTC 1 cut(s) 248
Eco57I CTGAAG 1 cut(s) 699
Eco81I CCTNAGG 1 cut(s) 1077
Eco91I GGTNACC 1 cut(s) 811
EcoICRI GAGCTC 1 cut(s) 248
EcoO65I GGTNACC 1 cut(s) 811
EcoRII CCWGG 2 cut(s) 428, 651
EcoT14I CCWWGG 3 cut(s) 87, 573, 1012
EcoT38I GRGCYC 2 cut(s) 250, 284
ErhI CCWWGG 3 cut(s) 87, 573, 1012
Esp3I CGTCTC 1 cut(s) 842
FaeI CATG 6 cut(s) 71, 118, 166, 403, 497, 510
FaqI GGGAC 3 cut(s) 105, 555, 565
FatI CATG 6 cut(s) 67, 114, 162, 399, 493, 506
FblI GTMKAC 1 cut(s) 146
Fnu4HI GCNGC 5 cut(s) 24, 302, 382, 1050, 1053
FokI GGATG 3 cut(s) 70, 334, 1016
FriOI GRGCYC 2 cut(s) 250, 284
Fsp4HI GCNGC 5 cut(s) 24, 302, 382, 1050, 1053
FspBI CTAG 5 cut(s) 618, 644, 720, 866, 1102
GluI GCNGC 5 cut(s) 24, 302, 382, 1050, 1053
GsuI CTGGAG 1 cut(s) 240
HaeIII GGCC 6 cut(s) 5, 517, 595, 636, 885, 1094
HapII CCGG 4 cut(s) 154, 412, 513, 667
HgaI GACGC 3 cut(s) 68, 701, 776
Hin1II CATG 6 cut(s) 71, 118, 166, 403, 497, 510
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 2 cut(s) 681, 830
HinfI GANTC 2 cut(s) 466, 560
HpaII CCGG 4 cut(s) 154, 412, 513, 667
HphI GGTGA 3 cut(s) 555, 715, 815
Hpy166II GTNNAC 2 cut(s) 73, 147
Hpy188I TCNGA 6 cut(s) 252, 345, 358, 375, 446, 1072
Hpy188III TCNNGA 4 cut(s) 424, 677, 866, 911
Hpy8I GTNNAC 2 cut(s) 73, 147
Hpy99I CGWCG 3 cut(s) 349, 717, 792
HpyAV CCTTC 7 cut(s) 50, 132, 212, 717, 794, 994, 1078
HpyCH4III ACNGT 3 cut(s) 556, 567, 976
HpyCH4IV ACGT 3 cut(s) 347, 370, 439
HpyCH4V TGCA 6 cut(s) 17, 53, 304, 733, 872, 1055
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 32, 254, 751
HpyF3I CTNAG 4 cut(s) 519, 839, 912, 1077
HpySE526I ACGT 3 cut(s) 347, 370, 439
Hsp92II CATG 6 cut(s) 71, 118, 166, 403, 497, 510
Kzo9I GATC 6 cut(s) 229, 252, 353, 387, 453, 735
LmnI GCTCC 5 cut(s) 253, 515, 742, 751, 913
Lsp1109I GCAGC 5 cut(s) 35, 288, 393, 1036, 1039
LweI GCATC 4 cut(s) 4, 276, 859, 1023
MaeI CTAG 5 cut(s) 618, 644, 720, 866, 1102
MaeII ACGT 3 cut(s) 347, 370, 439
MaeIII GTNAC 3 cut(s) 487, 561, 811
MalI GATC 6 cut(s) 231, 254, 355, 389, 455, 737
MboI GATC 6 cut(s) 229, 252, 353, 387, 453, 735
MboII GAAGA 4 cut(s) 224, 236, 640, 1033
MflI RGATCY 1 cut(s) 353
MhlI GDGCHC 4 cut(s) 250, 284, 666, 910
MlsI TGGCCA 1 cut(s) 636
MluCI AATT 1 cut(s) 1066
MluNI TGGCCA 1 cut(s) 636
MlyI GAGTC 2 cut(s) 460, 569
MmeI TCCRAC 2 cut(s) 368, 1095
Mox20I TGGCCA 1 cut(s) 636
MroXI GAANNNNTTC 1 cut(s) 684
MscI TGGCCA 1 cut(s) 636
MseI TTAA 3 cut(s) 192, 996, 1065
MslI CAYNNNNRTG 2 cut(s) 167, 782
Msp20I TGGCCA 1 cut(s) 636
MspA1I CMGCKG 1 cut(s) 301
MspI CCGG 4 cut(s) 154, 412, 513, 667
MspR9I CCNGG 4 cut(s) 430, 514, 653, 667
MvaI CCWGG 2 cut(s) 430, 653
MwoI GCNNNNNNNGC 4 cut(s) 23, 32, 254, 751
NciI CCSGG 2 cut(s) 514, 667
NdeII GATC 6 cut(s) 229, 252, 353, 387, 453, 735
NlaIII CATG 6 cut(s) 71, 118, 166, 403, 497, 510
NlaIV GGNNCC 5 cut(s) 199, 543, 663, 753, 768
NmeAIII GCCGAG 1 cut(s) 1062
NmuCI GTSAC 1 cut(s) 561
NspI RCATGY 1 cut(s) 71
OliI CACNNNNGTG 1 cut(s) 782
PaqCI CACCTGC 1 cut(s) 718
PciI ACATGT 1 cut(s) 67
PdmI GAANNNNTTC 1 cut(s) 684
PfoI TCCNGGA 1 cut(s) 651
PkrI GCNGC 5 cut(s) 25, 303, 383, 1051, 1054
Ple19I CGATCG 2 cut(s) 255, 390
PleI GAGTC 2 cut(s) 460, 568
PpsI GAGTC 2 cut(s) 460, 568
Ppu21I YACGTR 1 cut(s) 440
PscI ACATGT 1 cut(s) 67
PshAI GACNNNNGTC 1 cut(s) 78
Psp124BI GAGCTC 1 cut(s) 250
Psp6I CCWGG 2 cut(s) 428, 651
PspEI GGTNACC 1 cut(s) 811
PspGI CCWGG 2 cut(s) 428, 651
PspN4I GGNNCC 5 cut(s) 199, 543, 663, 753, 768
PspPI GGNCC 6 cut(s) 515, 542, 593, 669, 883, 1093
PsrI GAACNNNNNNTAC 2 cut(s) 389, 421
PstI CTGCAG 1 cut(s) 1057
PsuI RGATCY 1 cut(s) 353
PvuI CGATCG 2 cut(s) 255, 390
RsaI GTAC 2 cut(s) 398, 973
RsaNI GTAC 2 cut(s) 397, 972
RseI CAYNNNNRTG 2 cut(s) 167, 782
SacI GAGCTC 1 cut(s) 250
SaqAI TTAA 3 cut(s) 192, 996, 1065
SatI GCNGC 5 cut(s) 24, 302, 382, 1050, 1053
Sau3AI GATC 6 cut(s) 229, 252, 353, 387, 453, 735
Sau96I GGNCC 6 cut(s) 515, 542, 593, 669, 883, 1093
SchI GAGTC 2 cut(s) 460, 569
ScrFI CCNGG 4 cut(s) 430, 514, 653, 667
SduI GDGCHC 4 cut(s) 250, 284, 666, 910
SfaNI GCATC 4 cut(s) 4, 276, 859, 1023
SfcI CTRYAG 2 cut(s) 975, 1053
SinI GGWCC 2 cut(s) 542, 669
SmiMI CAYNNNNRTG 2 cut(s) 167, 782
SmlI CTYRAG 1 cut(s) 746
SmoI CTYRAG 1 cut(s) 746
SnaBI TACGTA 1 cut(s) 440
Sse9I AATT 1 cut(s) 1066
SsiI CCGC 2 cut(s) 263, 299
SspMI CTAG 5 cut(s) 618, 644, 720, 866, 1102
SstI GAGCTC 1 cut(s) 250
StyD4I CCNGG 4 cut(s) 428, 512, 651, 665
StyI CCWWGG 3 cut(s) 87, 573, 1012
TaaI ACNGT 3 cut(s) 556, 567, 976
TaiI ACGT 3 cut(s) 350, 373, 442
TaqI TCGA 3 cut(s) 210, 244, 408
TasI AATT 1 cut(s) 1066
TatI WGTACW 1 cut(s) 396
Tru1I TTAA 3 cut(s) 192, 996, 1065
Tru9I TTAA 3 cut(s) 192, 996, 1065
TscAI CASTG 1 cut(s) 585
TseFI GTSAC 1 cut(s) 561
TseI GCWGC 5 cut(s) 23, 301, 381, 1049, 1052
Tsp45I GTSAC 1 cut(s) 561
TspDTI ATGAA 3 cut(s) 103, 151, 338
TspRI CASTG 1 cut(s) 585
VpaK11BI GGWCC 2 cut(s) 542, 669
XbaI TCTAGA 1 cut(s) 865
XceI RCATGY 1 cut(s) 71
XmiI GTMKAC 1 cut(s) 146
XmnI GAANNNNTTC 1 cut(s) 684
XspI CTAG 5 cut(s) 618, 644, 720, 866, 1102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.