Rmu_sc0001499.1_g000062

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001499.1
OG0000308
Physical Location & Seq
Forward (+)
196096 .. 197343
1248 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001499.1_g000062.1.cds

Sequence Viewer

Length: 1092 bp
atggcctctgatgatgcaatggcagcaagacttgcctcctcccttgctattgcagaagggaaacggcatgttgacttgcgtccatccaagggactgcgacaaccagaagttttcatgcttggaaaactattgactgcaaaggagtatacacaccggtcattcatgggaatgttcaaatctgcgtggagggttaatggcacccttcgtgtcgaagaagttggagaagatgatcggggtttcaatcgagctccgatcgctttggcggagtatgatggagtgagcccgatgctgtcagtaccgctgcaaaagtcatcgtattggatgaagttgattggagttcctccgacgtttagatccgaaaggattatacgtttgataggcagcacgatcggggagtacatggagttcgaccggacggctttccagaccagggtgctacgtatccgagtggagatcgcctataagacgccattgctgctcaggcatcgattgccatgctccgggcctgagttgatggaggacgagcagggaccattggggacggtggagtcgctgtcagccttggcagtgctatgtggagggccagacacaagtgctactacaactagggttttggcaaatggccaaaccctagtcttccaggacaaggtgccccggtccattcctgaagcttttctgcctcaacaggtggtgaatatgggtcgggctaaaaggcaggtgcagatcaggaagcttgaggagccacggcaggaggcaccacccatcacgggggtgcgtcatcatagagaaggtgatgaggtaaccatctcccctaaaaagcttcgtctcagtttggctgtgggtaagaaaactctagatgcaatgactatgggccttattgaagcacctgttggtgctcctgagcaaccaaagagaaagtgtggtcgtcctgtaggaagtctcaacaaaatgttgtatggtactgtaggaaagagtaaaatggttaagaaggatgatgaccaaggtaagaagaccaacctgatgccaaggttgttagctgctgcagatggagttaattccgaccctaaggggaaggagttggcccttgtctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

363

Amino Acids

40.01

Weight (kDa)

9.74

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 706
AasI GACNNNNNNGTC 1 cut(s) 547
Acc36I ACCTGC 1 cut(s) 706
AccB1I GGYRCC 3 cut(s) 197, 649, 754
AccI GTMKAC 1 cut(s) 146
AciI CCGC 2 cut(s) 263, 299
AclWI GGATC 1 cut(s) 348
AcoI YGGCCR 1 cut(s) 622
AcuI CTGAAG 1 cut(s) 687
AcyI GRCGYC 1 cut(s) 467
AfaI GTAC 3 cut(s) 297, 398, 961
AfiI CCNNNNNNNGG 6 cut(s) 89, 430, 500, 646, 767, 768
AgeI ACCGGT 1 cut(s) 153
AgsI TTSAA 3 cut(s) 175, 241, 881
AjnI CCWGG 2 cut(s) 428, 639
AjuI GAANNNNNNNTTGG 2 cut(s) 873, 905
AleI CACNNNNGTG 1 cut(s) 770
AluBI AGCT 5 cut(s) 248, 671, 733, 820, 1037
AluI AGCT 5 cut(s) 248, 671, 733, 820, 1037
Alw21I GWGCWC 2 cut(s) 250, 898
Alw26I GTCTC 2 cut(s) 830, 944
AlwI GGATC 1 cut(s) 348
AoxI GGCC 6 cut(s) 3, 503, 581, 622, 871, 1080
ApeKI GCWGC 6 cut(s) 23, 301, 381, 475, 1037, 1040
AsiGI ACCGGT 1 cut(s) 153
Asp700I GAANNNNTTC 1 cut(s) 672
AspS9I GGNCC 6 cut(s) 503, 530, 581, 657, 871, 1081
AsuC2I CCSGG 2 cut(s) 502, 655
AsuHPI GGTGA 2 cut(s) 703, 803
AvaII GGWCC 2 cut(s) 530, 657
AxyI CCTNAGG 1 cut(s) 1065
BaeGI GKGCMC 1 cut(s) 654
BalI TGGCCA 1 cut(s) 624
BanI GGYRCC 3 cut(s) 197, 649, 754
BanII GRGCYC 2 cut(s) 250, 284
BbsI GAAGAC 2 cut(s) 628, 1016
Bbv12I GWGCWC 2 cut(s) 250, 898
BbvI GCAGC 6 cut(s) 35, 288, 393, 462, 1024, 1027
BccI CCATC 6 cut(s) 91, 266, 508, 770, 812, 1040
BceAI ACGGC 3 cut(s) 80, 432, 761
BcgI CGANNNNNNTGC 4 cut(s) 370, 404, 477, 511
BciT130I CCWGG 2 cut(s) 430, 641
BciVI GTATCC 1 cut(s) 452
BcnI CCSGG 2 cut(s) 502, 655
BcoDI GTCTC 2 cut(s) 830, 944
BfaI CTAG 4 cut(s) 606, 632, 854, 1090
BfmI CTRYAG 3 cut(s) 930, 963, 1041
BfuAI ACCTGC 1 cut(s) 706
BfuI GTATCC 1 cut(s) 452
BisI GCNGC 6 cut(s) 24, 302, 382, 476, 1038, 1041
BlsI GCNGC 6 cut(s) 25, 303, 383, 477, 1039, 1042
Bme1390I CCNGG 4 cut(s) 430, 502, 641, 655
Bme18I GGWCC 2 cut(s) 530, 657
BmgT120I GGNCC 6 cut(s) 503, 530, 581, 657, 871, 1081
BmiI GGNNCC 5 cut(s) 199, 531, 651, 741, 756
BmrFI CCNGG 4 cut(s) 430, 502, 641, 655
BmsI GCATC 5 cut(s) 4, 276, 493, 847, 1011
BoxI GACNNNNGTC 1 cut(s) 78
BpiI GAAGAC 2 cut(s) 628, 1016
Bpu10I CCTNAGC 2 cut(s) 479, 900
BpuEI CTTGAG 1 cut(s) 755
BpuMI CCSGG 2 cut(s) 502, 655
Bsa29I ATCGAT 1 cut(s) 487
BsaAI YACGTR 1 cut(s) 440
BsaHI GRCGYC 1 cut(s) 467
BsaJI CCNNGG 7 cut(s) 87, 429, 561, 653, 743, 1000, 1025
BsaWI WCCGGW 2 cut(s) 153, 411
BsaXI ACNNNNNCTCC 2 cut(s) 539, 569
Bsc4I CCNNNNNNNGG 6 cut(s) 89, 430, 500, 646, 767, 768
Bse118I RCCGGY 1 cut(s) 153
Bse21I CCTNAGG 1 cut(s) 1065
Bse3DI GCAATG 3 cut(s) 24, 470, 867
BseBI CCWGG 2 cut(s) 430, 641
BseCI ATCGAT 1 cut(s) 487
BseDI CCNNGG 7 cut(s) 87, 429, 561, 653, 743, 1000, 1025
BseGI GGATG 3 cut(s) 83, 327, 997
BseLI CCNNNNNNNGG 6 cut(s) 89, 430, 500, 646, 767, 768
BseMI GCAATG 3 cut(s) 24, 470, 867
BseMII CTCAG 4 cut(s) 493, 498, 841, 891
BseRI GAGGAG 2 cut(s) 28, 752
BseSI GKGCMC 1 cut(s) 654
BseXI GCAGC 6 cut(s) 35, 288, 393, 462, 1024, 1027
BsgI GTGCAG 1 cut(s) 740
Bsh1285I CGRYCG 3 cut(s) 255, 390, 412
BshFI GGCC 6 cut(s) 5, 505, 583, 624, 873, 1082
BshNI GGYRCC 3 cut(s) 197, 649, 754
BshTI ACCGGT 1 cut(s) 153
BshVI ATCGAT 1 cut(s) 487
BsiEI CGRYCG 3 cut(s) 255, 390, 412
BsiHKAI GWGCWC 2 cut(s) 250, 898
BsiSI CCGG 4 cut(s) 154, 412, 501, 655
BslFI GGGAC 3 cut(s) 105, 543, 553
BslI CCNNNNNNNGG 6 cut(s) 89, 430, 500, 646, 767, 768
BsmAI GTCTC 2 cut(s) 830, 944
BsmBI CGTCTC 1 cut(s) 830
BsmFI GGGAC 3 cut(s) 105, 543, 553
BsnI GGCC 6 cut(s) 5, 505, 583, 624, 873, 1082
Bsp1286I GDGCHC 4 cut(s) 250, 284, 654, 898
Bsp143I GATC 6 cut(s) 229, 252, 353, 387, 453, 723
BspACI CCGC 2 cut(s) 263, 299
BspANI GGCC 6 cut(s) 5, 505, 583, 624, 873, 1082
BspCNI CTCAG 4 cut(s) 492, 499, 840, 892
BspDI ATCGAT 1 cut(s) 487
BspLI GGNNCC 5 cut(s) 199, 531, 651, 741, 756
BspMAI CTGCAG 1 cut(s) 1045
BspMI ACCTGC 1 cut(s) 706
BspPI GGATC 1 cut(s) 348
BspT107I GGYRCC 3 cut(s) 197, 649, 754
BsrDI GCAATG 3 cut(s) 24, 470, 867
BsrFI RCCGGY 1 cut(s) 153
BssAI RCCGGY 1 cut(s) 153
BssECI CCNNGG 7 cut(s) 87, 429, 561, 653, 743, 1000, 1025
BssMI GATC 6 cut(s) 229, 252, 353, 387, 453, 723
BssNAI GTATAC 1 cut(s) 147
BssNI GRCGYC 1 cut(s) 467
BssT1I CCWWGG 4 cut(s) 87, 561, 1000, 1025
Bst1107I GTATAC 1 cut(s) 147
Bst2UI CCWGG 2 cut(s) 430, 641
Bst4CI ACNGT 2 cut(s) 544, 964
BstACI GRCGYC 1 cut(s) 467
BstAPI GCANNNNNTGC 2 cut(s) 32, 490
BstBAI YACGTR 1 cut(s) 440
BstDEI CTNAG 5 cut(s) 479, 507, 827, 900, 1065
BstDSI CCRYGG 1 cut(s) 743
BstEII GGTNACC 1 cut(s) 799
BstF5I GGATG 3 cut(s) 83, 327, 997
BstKTI GATC 6 cut(s) 232, 255, 356, 390, 456, 726
BstMAI GTCTC 2 cut(s) 830, 944
BstMBI GATC 6 cut(s) 229, 252, 353, 387, 453, 723
BstMCI CGRYCG 3 cut(s) 255, 390, 412
BstMWI GCNNNNNNNGC 7 cut(s) 23, 32, 254, 475, 481, 490, 739
BstNI CCWGG 2 cut(s) 430, 641
BstNSI RCATGY 1 cut(s) 71
BstPAI GACNNNNGTC 1 cut(s) 78
BstPI GGTNACC 1 cut(s) 799
BstSCI CCNGG 4 cut(s) 428, 500, 639, 653
BstSFI CTRYAG 3 cut(s) 930, 963, 1041
BstSLI GKGCMC 1 cut(s) 654
BstSNI TACGTA 1 cut(s) 440
BstV1I GCAGC 6 cut(s) 35, 288, 393, 462, 1024, 1027
BstV2I GAAGAC 2 cut(s) 628, 1016
BstX2I RGATCY 1 cut(s) 353
BstYI RGATCY 1 cut(s) 353
BstZ17I GTATAC 1 cut(s) 147
Bsu15I ATCGAT 1 cut(s) 487
Bsu36I CCTNAGG 1 cut(s) 1065
BsuI GTATCC 1 cut(s) 452
BsuRI GGCC 6 cut(s) 5, 505, 583, 624, 873, 1082
BsuTUI ATCGAT 1 cut(s) 487
BtgI CCRYGG 1 cut(s) 743
BtsCI GGATG 3 cut(s) 83, 327, 997
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 1 cut(s) 573
BveI ACCTGC 1 cut(s) 706
Cfr10I RCCGGY 1 cut(s) 153
Cfr13I GGNCC 6 cut(s) 503, 530, 581, 657, 871, 1081
ClaI ATCGAT 1 cut(s) 487
CseI GACGC 3 cut(s) 68, 475, 764
Csp6I GTAC 3 cut(s) 296, 397, 960
CspAI ACCGGT 1 cut(s) 153
CviAII CATG 5 cut(s) 68, 115, 163, 400, 495
CviQI GTAC 3 cut(s) 296, 397, 960
DdeI CTNAG 5 cut(s) 479, 507, 827, 900, 1065
DpnI GATC 6 cut(s) 231, 254, 355, 389, 455, 725
DpnII GATC 6 cut(s) 229, 252, 353, 387, 453, 723
DrdI GACNNNNNNGTC 1 cut(s) 547
DseDI GACNNNNNNGTC 1 cut(s) 547
EaeI YGGCCR 1 cut(s) 622
EciI GGCGGA 1 cut(s) 278
Ecl136II GAGCTC 1 cut(s) 248
Eco105I TACGTA 1 cut(s) 440
Eco130I CCWWGG 4 cut(s) 87, 561, 1000, 1025
Eco24I GRGCYC 2 cut(s) 250, 284
Eco47I GGWCC 2 cut(s) 530, 657
Eco53kI GAGCTC 1 cut(s) 248
Eco57I CTGAAG 1 cut(s) 687
Eco81I CCTNAGG 1 cut(s) 1065
Eco91I GGTNACC 1 cut(s) 799
EcoICRI GAGCTC 1 cut(s) 248
EcoO65I GGTNACC 1 cut(s) 799
EcoRII CCWGG 2 cut(s) 428, 639
EcoT14I CCWWGG 4 cut(s) 87, 561, 1000, 1025
EcoT38I GRGCYC 2 cut(s) 250, 284
ErhI CCWWGG 4 cut(s) 87, 561, 1000, 1025
Esp3I CGTCTC 1 cut(s) 830
FaeI CATG 5 cut(s) 71, 118, 166, 403, 498
FaqI GGGAC 3 cut(s) 105, 543, 553
FatI CATG 5 cut(s) 67, 114, 162, 399, 494
FblI GTMKAC 1 cut(s) 146
Fnu4HI GCNGC 6 cut(s) 24, 302, 382, 476, 1038, 1041
FokI GGATG 3 cut(s) 70, 334, 1004
FriOI GRGCYC 2 cut(s) 250, 284
Fsp4HI GCNGC 6 cut(s) 24, 302, 382, 476, 1038, 1041
FspBI CTAG 4 cut(s) 606, 632, 854, 1090
GluI GCNGC 6 cut(s) 24, 302, 382, 476, 1038, 1041
HaeIII GGCC 6 cut(s) 5, 505, 583, 624, 873, 1082
HapII CCGG 4 cut(s) 154, 412, 501, 655
HgaI GACGC 3 cut(s) 68, 475, 764
Hin1I GRCGYC 1 cut(s) 467
Hin1II CATG 5 cut(s) 71, 118, 166, 403, 498
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 3 cut(s) 669, 731, 818
HinfI GANTC 1 cut(s) 548
HpaII CCGG 4 cut(s) 154, 412, 501, 655
HphI GGTGA 2 cut(s) 703, 803
Hpy166II GTNNAC 2 cut(s) 73, 147
Hpy188I TCNGA 6 cut(s) 10, 252, 345, 358, 446, 1060
Hpy188III TCNNGA 5 cut(s) 424, 665, 727, 854, 899
Hpy8I GTNNAC 2 cut(s) 73, 147
Hpy99I CGWCG 1 cut(s) 349
HpyAV CCTTC 5 cut(s) 50, 212, 782, 982, 1066
HpyCH4III ACNGT 2 cut(s) 544, 964
HpyCH4IV ACGT 3 cut(s) 347, 370, 439
HpyCH4V TGCA 7 cut(s) 17, 53, 137, 304, 721, 860, 1043
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 32, 254, 475, 481, 490, 739
HpyF3I CTNAG 5 cut(s) 479, 507, 827, 900, 1065
HpySE526I ACGT 3 cut(s) 347, 370, 439
Hsp92I GRCGYC 1 cut(s) 467
Hsp92II CATG 5 cut(s) 71, 118, 166, 403, 498
Kzo9I GATC 6 cut(s) 229, 252, 353, 387, 453, 723
LmnI GCTCC 4 cut(s) 253, 503, 739, 901
Lsp1109I GCAGC 6 cut(s) 35, 288, 393, 462, 1024, 1027
LweI GCATC 5 cut(s) 4, 276, 493, 847, 1011
MaeI CTAG 4 cut(s) 606, 632, 854, 1090
MaeII ACGT 3 cut(s) 347, 370, 439
MaeIII GTNAC 1 cut(s) 799
MalI GATC 6 cut(s) 231, 254, 355, 389, 455, 725
MboI GATC 6 cut(s) 229, 252, 353, 387, 453, 723
MboII GAAGA 4 cut(s) 224, 236, 628, 1021
MflI RGATCY 1 cut(s) 353
MhlI GDGCHC 4 cut(s) 250, 284, 654, 898
MlsI TGGCCA 1 cut(s) 624
MluCI AATT 1 cut(s) 1054
MluNI TGGCCA 1 cut(s) 624
MlyI GAGTC 1 cut(s) 557
MmeI TCCRAC 3 cut(s) 199, 368, 1083
Mox20I TGGCCA 1 cut(s) 624
MroXI GAANNNNTTC 1 cut(s) 672
MscI TGGCCA 1 cut(s) 624
MseI TTAA 3 cut(s) 192, 984, 1053
MslI CAYNNNNRTG 2 cut(s) 167, 770
Msp20I TGGCCA 1 cut(s) 624
MspA1I CMGCKG 1 cut(s) 301
MspI CCGG 4 cut(s) 154, 412, 501, 655
MspR9I CCNGG 4 cut(s) 430, 502, 641, 655
MvaI CCWGG 2 cut(s) 430, 641
MwoI GCNNNNNNNGC 7 cut(s) 23, 32, 254, 475, 481, 490, 739
NciI CCSGG 2 cut(s) 502, 655
NdeII GATC 6 cut(s) 229, 252, 353, 387, 453, 723
NlaIII CATG 5 cut(s) 71, 118, 166, 403, 498
NlaIV GGNNCC 5 cut(s) 199, 531, 651, 741, 756
NspI RCATGY 1 cut(s) 71
OliI CACNNNNGTG 1 cut(s) 770
PaqCI CACCTGC 1 cut(s) 706
PdmI GAANNNNTTC 1 cut(s) 672
PfoI TCCNGGA 1 cut(s) 639
PinAI ACCGGT 1 cut(s) 153
PkrI GCNGC 6 cut(s) 25, 303, 383, 477, 1039, 1042
Ple19I CGATCG 2 cut(s) 255, 390
PleI GAGTC 1 cut(s) 556
PpsI GAGTC 1 cut(s) 556
Ppu21I YACGTR 1 cut(s) 440
PshAI GACNNNNGTC 1 cut(s) 78
Psp124BI GAGCTC 1 cut(s) 250
Psp6I CCWGG 2 cut(s) 428, 639
PspEI GGTNACC 1 cut(s) 799
PspGI CCWGG 2 cut(s) 428, 639
PspN4I GGNNCC 5 cut(s) 199, 531, 651, 741, 756
PspPI GGNCC 6 cut(s) 503, 530, 581, 657, 871, 1081
PsrI GAACNNNNNNTAC 2 cut(s) 389, 421
PstI CTGCAG 1 cut(s) 1045
PsuI RGATCY 1 cut(s) 353
PvuI CGATCG 2 cut(s) 255, 390
RsaI GTAC 3 cut(s) 297, 398, 961
RsaNI GTAC 3 cut(s) 296, 397, 960
RseI CAYNNNNRTG 2 cut(s) 167, 770
SacI GAGCTC 1 cut(s) 250
SaqAI TTAA 3 cut(s) 192, 984, 1053
SatI GCNGC 6 cut(s) 24, 302, 382, 476, 1038, 1041
Sau3AI GATC 6 cut(s) 229, 252, 353, 387, 453, 723
Sau96I GGNCC 6 cut(s) 503, 530, 581, 657, 871, 1081
SchI GAGTC 1 cut(s) 557
ScrFI CCNGG 4 cut(s) 430, 502, 641, 655
SduI GDGCHC 4 cut(s) 250, 284, 654, 898
SfaNI GCATC 5 cut(s) 4, 276, 493, 847, 1011
SfcI CTRYAG 3 cut(s) 930, 963, 1041
SinI GGWCC 2 cut(s) 530, 657
SmiMI CAYNNNNRTG 2 cut(s) 167, 770
SmlI CTYRAG 1 cut(s) 734
SmoI CTYRAG 1 cut(s) 734
SnaBI TACGTA 1 cut(s) 440
Sse9I AATT 1 cut(s) 1054
SsiI CCGC 2 cut(s) 263, 299
SspMI CTAG 4 cut(s) 606, 632, 854, 1090
SstI GAGCTC 1 cut(s) 250
StyD4I CCNGG 4 cut(s) 428, 500, 639, 653
StyI CCWWGG 4 cut(s) 87, 561, 1000, 1025
TaaI ACNGT 2 cut(s) 544, 964
TaiI ACGT 3 cut(s) 350, 373, 442
TaqI TCGA 4 cut(s) 210, 244, 408, 487
TasI AATT 1 cut(s) 1054
TatI WGTACW 1 cut(s) 396
Tru1I TTAA 3 cut(s) 192, 984, 1053
Tru9I TTAA 3 cut(s) 192, 984, 1053
TscAI CASTG 1 cut(s) 573
TseI GCWGC 6 cut(s) 23, 301, 381, 475, 1037, 1040
TspDTI ATGAA 3 cut(s) 103, 151, 338
TspRI CASTG 1 cut(s) 573
VpaK11BI GGWCC 2 cut(s) 530, 657
XbaI TCTAGA 1 cut(s) 853
XceI RCATGY 1 cut(s) 71
XmiI GTMKAC 1 cut(s) 146
XmnI GAANNNNTTC 1 cut(s) 672
XspI CTAG 4 cut(s) 606, 632, 854, 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.