Rmu_sc0006325.1_g000003

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006325.1
OG0000308
Physical Location & Seq
Forward (+)
5132 .. 6384
1253 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006325.1_g000003.1.cds

Sequence Viewer

Length: 1173 bp
atggcaattgatgcaatggcagcccacttggcctcctccctagcgctggctgatggcaagcaaccggtggatttgcgtccatcaaaaggattgagacaacctgaagcattcatggtagggaagctactcacggcacgagaatattctcgtcgctctttccttggcctgtttcgatctgcatggagaatcaatggcagattgaatgttgaagaactcggagaagatgatagggtcttgttcacttttacagacccttcggatgtgaatagggtttggcaaggaggaccatggagatataaccgggctcctatagccttagcaccgtatgacggtgtcagtccggcaagggagatcccactgaagaaatcatcatattggatgacattgcaaggagtgccaccggccttcagatccgaacggattatgcgactgattgggagtaccctaggagagttcatggaagttgatcgccccgcctttcgaacgcgagttttgcgcattagggtcgagatcgattatgtcaaacctctcctgtttcgtagacatttcagggtggaagatgaagtccagttcatggtgcagtttcgatatgacaaattgtttggcaggtgtggcacctgcggcctagttaaccatgttggcctcccttgttcaggaccggatctggaagaagaccgtgacatgcctgttggcacggtggagcaacccacggctttagccgtattacggggactggaaaaccctaatgtcaatagggtaacgataaacaaccaaactctgattttcaaggctcaaatccctaatagcatacccgaagctatcctacctcaatctgtgatggccatgcgtcgacatcgaagacaagtgcagattagagaattgagtgaaccaagactcaacgaagatccaatcacaggacaacgccgtatgactatgggattgttggagggacctccgaacaataatgatcaacctaagagaaagagaggacatcctgttggaagtgtgaacaagctgccatatggaacagcaggaaaaggaagaaaaaaggatggagaacaagaaaagataaagagcaaaaagaccaacctgatgccgaggttgttagctgctgatgaacctgaaacaagcactaactctaaccctaaggggaaagagcaagtgcttgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

390

Amino Acids

44.08

Weight (kDa)

9.9

Isoelectric Point (pI)

45.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
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Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 597, 626
Acc16I TGCGCA 1 cut(s) 497
Acc36I ACCTGC 2 cut(s) 597, 626
AccB1I GGYRCC 1 cut(s) 614
AccB7I CCANNNNNTGG 1 cut(s) 574
AccI GTMKAC 2 cut(s) 541, 850
AccII CGCG 1 cut(s) 487
AciI CCGC 2 cut(s) 474, 621
AclWI GGATC 4 cut(s) 346, 405, 669, 899
AcoI YGGCCR 1 cut(s) 840
AcuI CTGAAG 3 cut(s) 123, 380, 391
AfaI GTAC 1 cut(s) 442
AfeI AGCGCT 1 cut(s) 45
AfiI CCNNNNNNNGG 7 cut(s) 46, 86, 329, 574, 653, 726, 914
AgeI ACCGGT 1 cut(s) 64
AgsI TTSAA 3 cut(s) 202, 209, 787
AluBI AGCT 4 cut(s) 124, 818, 1015, 1109
AluI AGCT 4 cut(s) 124, 818, 1015, 1109
Alw26I GTCTC 1 cut(s) 88
AlwI GGATC 4 cut(s) 346, 405, 669, 899
Aor51HI AGCGCT 1 cut(s) 45
AoxI GGCC 6 cut(s) 30, 163, 402, 622, 640, 840
ApeKI GCWGC 3 cut(s) 20, 1015, 1109
ArsI GACNNNNNNTTYG 2 cut(s) 584, 616
AsiGI ACCGGT 1 cut(s) 64
AspA2I CCTAGG 1 cut(s) 445
AspLEI GCGC 2 cut(s) 46, 498
AspS9I GGNCC 3 cut(s) 284, 656, 950
AsuC2I CCSGG 1 cut(s) 302
AsuII TTCGAA 1 cut(s) 481
AvaII GGWCC 3 cut(s) 284, 656, 950
AvrII CCTAGG 1 cut(s) 445
AxyI CCTNAGG 1 cut(s) 1146
BalI TGGCCA 1 cut(s) 842
BanI GGYRCC 1 cut(s) 614
BanII GRGCYC 1 cut(s) 307
BarI GAAGNNNNNNTAC 2 cut(s) 807, 839
BauI CACGAG 1 cut(s) 135
BbsI GAAGAC 2 cut(s) 678, 865
BbvI GCAGC 3 cut(s) 32, 1002, 1096
BccI CCATC 4 cut(s) 47, 88, 832, 1046
BceAI ACGGC 4 cut(s) 147, 704, 726, 909
BcgI CGANNNNNNTGC 2 cut(s) 487, 521
BclI TGATCA 1 cut(s) 967
BcnI CCSGG 1 cut(s) 302
BcoDI GTCTC 1 cut(s) 88
BfaI CTAG 3 cut(s) 41, 446, 626
BfmI CTRYAG 1 cut(s) 309
BfoI RGCGCY 1 cut(s) 47
BfuAI ACCTGC 2 cut(s) 597, 626
BglI GCCNNNNNGGC 1 cut(s) 29
BisI GCNGC 4 cut(s) 21, 622, 1016, 1110
BlnI CCTAGG 1 cut(s) 445
BlsI GCNGC 4 cut(s) 22, 623, 1017, 1111
Bme1390I CCNGG 1 cut(s) 302
Bme18I GGWCC 3 cut(s) 284, 656, 950
BmgT120I GGNCC 3 cut(s) 284, 656, 950
BmiI GGNNCC 3 cut(s) 306, 616, 951
BmrFI CCNGG 1 cut(s) 302
BmsI GCATC 1 cut(s) 1083
BpiI GAAGAC 2 cut(s) 678, 865
Bpu10I CCTNAGC 1 cut(s) 316
Bpu14I TTCGAA 1 cut(s) 481
BpuMI CCSGG 1 cut(s) 302
Bsa29I ATCGAT 1 cut(s) 513
BsaJI CCNNGG 5 cut(s) 160, 287, 445, 708, 1097
BsaWI WCCGGW 2 cut(s) 64, 658
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bsc4I CCNNNNNNNGG 7 cut(s) 46, 86, 329, 574, 653, 726, 914
Bse118I RCCGGY 2 cut(s) 64, 400
Bse1I ACTGG 2 cut(s) 568, 738
Bse21I CCTNAGG 1 cut(s) 1146
Bse3DI GCAATG 2 cut(s) 21, 383
BseCI ATCGAT 1 cut(s) 513
BseDI CCNNGG 5 cut(s) 160, 287, 445, 708, 1097
BseGI GGATG 4 cut(s) 265, 384, 991, 1057
BseLI CCNNNNNNNGG 7 cut(s) 46, 86, 329, 574, 653, 726, 914
BseMI GCAATG 2 cut(s) 21, 383
BseNI ACTGG 2 cut(s) 568, 738
BseRI GAGGAG 1 cut(s) 25
BseXI GCAGC 3 cut(s) 32, 1002, 1096
BsgI GTGCAG 2 cut(s) 599, 887
Bsh1236I CGCG 1 cut(s) 487
BshFI GGCC 6 cut(s) 32, 165, 404, 624, 642, 842
BshNI GGYRCC 1 cut(s) 614
BshTI ACCGGT 1 cut(s) 64
BshVI ATCGAT 1 cut(s) 513
BsiSI CCGG 5 cut(s) 65, 301, 341, 401, 659
BslFI GGGAC 2 cut(s) 744, 963
BslI CCNNNNNNNGG 7 cut(s) 46, 86, 329, 574, 653, 726, 914
BsmAI GTCTC 1 cut(s) 88
BsmFI GGGAC 2 cut(s) 744, 963
BsmI GAATGC 1 cut(s) 107
BsnI GGCC 6 cut(s) 32, 165, 404, 624, 642, 842
Bsp119I TTCGAA 1 cut(s) 481
Bsp1286I GDGCHC 1 cut(s) 307
Bsp143I GATC 8 cut(s) 173, 351, 410, 466, 510, 661, 904, 967
Bsp19I CCATGG 1 cut(s) 287
BspACI CCGC 2 cut(s) 474, 621
BspANI GGCC 6 cut(s) 32, 165, 404, 624, 642, 842
BspDI ATCGAT 1 cut(s) 513
BspFNI CGCG 1 cut(s) 487
BspLI GGNNCC 3 cut(s) 306, 616, 951
BspMI ACCTGC 2 cut(s) 597, 626
BspPI GGATC 4 cut(s) 346, 405, 669, 899
BspT104I TTCGAA 1 cut(s) 481
BspT107I GGYRCC 1 cut(s) 614
BsrDI GCAATG 2 cut(s) 21, 383
BsrFI RCCGGY 2 cut(s) 64, 400
BsrI ACTGG 2 cut(s) 568, 738
BssAI RCCGGY 2 cut(s) 64, 400
BssECI CCNNGG 5 cut(s) 160, 287, 445, 708, 1097
BssMI GATC 8 cut(s) 173, 351, 410, 466, 510, 661, 904, 967
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 3 cut(s) 160, 287, 445
Bst2BI CACGAG 1 cut(s) 135
Bst4CI ACNGT 4 cut(s) 324, 332, 677, 697
BstAPI GCANNNNNTGC 2 cut(s) 11, 394
BstBI TTCGAA 1 cut(s) 481
BstC8I GCNNGC 3 cut(s) 48, 59, 1167
BstDEI CTNAG 3 cut(s) 316, 975, 1146
BstDSI CCRYGG 2 cut(s) 287, 708
BstENI CCTNNNNNAGG 1 cut(s) 651
BstF5I GGATG 4 cut(s) 265, 384, 991, 1057
BstFNI CGCG 1 cut(s) 487
BstH2I RGCGCY 1 cut(s) 47
BstHHI GCGC 2 cut(s) 46, 498
BstKTI GATC 8 cut(s) 176, 354, 413, 469, 513, 664, 907, 970
BstMAI GTCTC 1 cut(s) 88
BstMBI GATC 8 cut(s) 173, 351, 410, 466, 510, 661, 904, 967
BstMWI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 311, 394, 493, 612, 621
BstNSI RCATGY 1 cut(s) 685
BstSCI CCNGG 1 cut(s) 300
BstSFI CTRYAG 1 cut(s) 309
BstUI CGCG 1 cut(s) 487
BstV1I GCAGC 3 cut(s) 32, 1002, 1096
BstV2I GAAGAC 2 cut(s) 678, 865
BstX2I RGATCY 4 cut(s) 351, 410, 661, 904
BstYI RGATCY 4 cut(s) 351, 410, 661, 904
Bsu15I ATCGAT 1 cut(s) 513
Bsu36I CCTNAGG 1 cut(s) 1146
BsuRI GGCC 6 cut(s) 32, 165, 404, 624, 642, 842
BsuTUI ATCGAT 1 cut(s) 513
BtgI CCRYGG 2 cut(s) 287, 708
BtsCI GGATG 4 cut(s) 265, 384, 991, 1057
BtsIMutI CAGTG 1 cut(s) 356
BveI ACCTGC 2 cut(s) 597, 626
Cac8I GCNNGC 3 cut(s) 48, 59, 1167
CfoI GCGC 2 cut(s) 46, 498
Cfr10I RCCGGY 2 cut(s) 64, 400
Cfr13I GGNCC 3 cut(s) 284, 656, 950
ClaI ATCGAT 1 cut(s) 513
CseI GACGC 2 cut(s) 65, 836
Csp6I GTAC 1 cut(s) 441
CspAI ACCGGT 1 cut(s) 64
CviAII CATG 8 cut(s) 112, 180, 288, 457, 574, 635, 682, 844
CviQI GTAC 1 cut(s) 441
DdeI CTNAG 3 cut(s) 316, 975, 1146
DpnI GATC 8 cut(s) 175, 353, 412, 468, 512, 663, 906, 969
DpnII GATC 8 cut(s) 173, 351, 410, 466, 510, 661, 904, 967
EaeI YGGCCR 1 cut(s) 840
Eco130I CCWWGG 3 cut(s) 160, 287, 445
Eco24I GRGCYC 1 cut(s) 307
Eco47I GGWCC 3 cut(s) 284, 656, 950
Eco47III AGCGCT 1 cut(s) 45
Eco57I CTGAAG 3 cut(s) 123, 380, 391
Eco81I CCTNAGG 1 cut(s) 1146
EcoNI CCTNNNNNAGG 1 cut(s) 651
EcoO109I RGGNCCY 1 cut(s) 950
EcoT14I CCWWGG 3 cut(s) 160, 287, 445
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 3 cut(s) 160, 287, 445
FaeI CATG 8 cut(s) 115, 183, 291, 460, 577, 638, 685, 847
FaqI GGGAC 2 cut(s) 744, 963
FatI CATG 8 cut(s) 111, 179, 287, 456, 573, 634, 681, 843
FauI CCCGC 1 cut(s) 481
FauNDI CATATG 1 cut(s) 1021
FbaI TGATCA 1 cut(s) 967
FblI GTMKAC 2 cut(s) 541, 850
Fnu4HI GCNGC 4 cut(s) 21, 622, 1016, 1110
FokI GGATG 4 cut(s) 272, 391, 978, 1064
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 4 cut(s) 21, 622, 1016, 1110
FspBI CTAG 3 cut(s) 41, 446, 626
FspI TGCGCA 1 cut(s) 497
GlaI GCGC 2 cut(s) 45, 497
GluI GCNGC 4 cut(s) 21, 622, 1016, 1110
HaeII RGCGCY 1 cut(s) 47
HaeIII GGCC 6 cut(s) 32, 165, 404, 624, 642, 842
HapII CCGG 5 cut(s) 65, 301, 341, 401, 659
HgaI GACGC 2 cut(s) 65, 836
HhaI GCGC 2 cut(s) 46, 498
Hin1II CATG 8 cut(s) 115, 183, 291, 460, 577, 638, 685, 847
Hin6I GCGC 2 cut(s) 44, 496
HinP1I GCGC 2 cut(s) 44, 496
HincII GTYRAC 2 cut(s) 631, 851
HindII GTYRAC 2 cut(s) 631, 851
HinfI GANTC 2 cut(s) 186, 894
HpaI GTTAAC 1 cut(s) 631
HpaII CCGG 5 cut(s) 65, 301, 341, 401, 659
Hpy166II GTNNAC 6 cut(s) 240, 542, 631, 851, 887, 1009
Hpy188I TCNGA 6 cut(s) 218, 259, 410, 415, 780, 957
Hpy188III TCNNGA 3 cut(s) 508, 654, 665
Hpy8I GTNNAC 6 cut(s) 240, 542, 631, 851, 887, 1009
Hpy99I CGWCG 2 cut(s) 153, 852
HpyAV CCTTC 2 cut(s) 264, 415
HpyCH4III ACNGT 4 cut(s) 324, 332, 677, 697
HpyCH4V TGCA 5 cut(s) 14, 179, 388, 580, 868
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 311, 394, 493, 612, 621
HpyF3I CTNAG 3 cut(s) 316, 975, 1146
Hsp92II CATG 8 cut(s) 115, 183, 291, 460, 577, 638, 685, 847
HspAI GCGC 2 cut(s) 44, 496
Ksp22I TGATCA 1 cut(s) 967
KspAI GTTAAC 1 cut(s) 631
Kzo9I GATC 8 cut(s) 173, 351, 410, 466, 510, 661, 904, 967
LmnI GCTCC 2 cut(s) 310, 700
Lsp1109I GCAGC 3 cut(s) 32, 1002, 1096
LweI GCATC 1 cut(s) 1083
MaeI CTAG 3 cut(s) 41, 446, 626
MaeIII GTNAC 2 cut(s) 677, 757
MalI GATC 8 cut(s) 175, 353, 412, 468, 512, 663, 906, 969
MboI GATC 8 cut(s) 173, 351, 410, 466, 510, 661, 904, 967
MboII GAAGA 9 cut(s) 221, 233, 373, 569, 680, 683, 870, 914, 1053
MfeI CAATTG 1 cut(s) 6
MflI RGATCY 4 cut(s) 351, 410, 661, 904
MhlI GDGCHC 1 cut(s) 307
MlsI TGGCCA 1 cut(s) 842
MluCI AATT 3 cut(s) 6, 596, 878
MluNI TGGCCA 1 cut(s) 842
MlyI GAGTC 1 cut(s) 888
MmeI TCCRAC 2 cut(s) 924, 979
Mox20I TGGCCA 1 cut(s) 842
MscI TGGCCA 1 cut(s) 842
MseI TTAA 2 cut(s) 630, 1171
Msp20I TGGCCA 1 cut(s) 842
MspI CCGG 5 cut(s) 65, 301, 341, 401, 659
MspR9I CCNGG 1 cut(s) 302
MunI CAATTG 1 cut(s) 6
Mva1269I GAATGC 1 cut(s) 107
MvnI CGCG 1 cut(s) 487
MwoI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 311, 394, 493, 612, 621
NciI CCSGG 1 cut(s) 302
NcoI CCATGG 1 cut(s) 287
NdeI CATATG 1 cut(s) 1021
NdeII GATC 8 cut(s) 173, 351, 410, 466, 510, 661, 904, 967
NlaIII CATG 8 cut(s) 115, 183, 291, 460, 577, 638, 685, 847
NlaIV GGNNCC 3 cut(s) 306, 616, 951
NmeAIII GCCGAG 1 cut(s) 1122
NmuCI GTSAC 1 cut(s) 677
NsbI TGCGCA 1 cut(s) 497
NspI RCATGY 1 cut(s) 685
NspV TTCGAA 1 cut(s) 481
PaqCI CACCTGC 2 cut(s) 597, 626
PcsI WCGNNNNNNNCGW 1 cut(s) 424
PctI GAATGC 1 cut(s) 107
PfeI GAWTC 1 cut(s) 186
PflFI GACNNNGTC 1 cut(s) 332
PflMI CCANNNNNTGG 1 cut(s) 574
PinAI ACCGGT 1 cut(s) 64
PkrI GCNGC 4 cut(s) 22, 623, 1017, 1111
PleI GAGTC 1 cut(s) 888
PpsI GAGTC 1 cut(s) 888
PpuMI RGGWCCY 1 cut(s) 950
Psp5II RGGWCCY 1 cut(s) 950
PspN4I GGNNCC 3 cut(s) 306, 616, 951
PspPI GGNCC 3 cut(s) 284, 656, 950
PspPPI RGGWCCY 1 cut(s) 950
PsuI RGATCY 4 cut(s) 351, 410, 661, 904
PsyI GACNNNGTC 1 cut(s) 332
RsaI GTAC 1 cut(s) 442
RsaNI GTAC 1 cut(s) 441
SalI GTCGAC 1 cut(s) 849
SaqAI TTAA 2 cut(s) 630, 1171
SatI GCNGC 4 cut(s) 21, 622, 1016, 1110
Sau3AI GATC 8 cut(s) 173, 351, 410, 466, 510, 661, 904, 967
Sau96I GGNCC 3 cut(s) 284, 656, 950
SchI GAGTC 1 cut(s) 888
ScrFI CCNGG 1 cut(s) 302
SduI GDGCHC 1 cut(s) 307
SfaNI GCATC 1 cut(s) 1083
SfcI CTRYAG 1 cut(s) 309
SfuI TTCGAA 1 cut(s) 481
SinI GGWCC 3 cut(s) 284, 656, 950
Sse9I AATT 3 cut(s) 6, 596, 878
SsiI CCGC 2 cut(s) 474, 621
SspI AATATT 1 cut(s) 143
SspMI CTAG 3 cut(s) 41, 446, 626
StyD4I CCNGG 1 cut(s) 300
StyI CCWWGG 3 cut(s) 160, 287, 445
TaaI ACNGT 4 cut(s) 324, 332, 677, 697
TaqI TCGA 7 cut(s) 172, 481, 507, 513, 586, 850, 856
TasI AATT 3 cut(s) 6, 596, 878
TauI GCSGC 1 cut(s) 624
TfiI GAWTC 1 cut(s) 186
Tru1I TTAA 2 cut(s) 630, 1171
Tru9I TTAA 2 cut(s) 630, 1171
TscAI CASTG 1 cut(s) 363
TseFI GTSAC 1 cut(s) 677
TseI GCWGC 3 cut(s) 20, 1015, 1109
Tsp45I GTSAC 1 cut(s) 677
TspDTI ATGAA 5 cut(s) 100, 445, 562, 576, 1131
TspGWI ACGGA 1 cut(s) 433
TspRI CASTG 1 cut(s) 363
Tth111I GACNNNGTC 1 cut(s) 332
Van91I CCANNNNNTGG 1 cut(s) 574
VpaK11BI GGWCC 3 cut(s) 284, 656, 950
XagI CCTNNNNNAGG 1 cut(s) 651
XceI RCATGY 1 cut(s) 685
XmaJI CCTAGG 1 cut(s) 445
XmiI GTMKAC 2 cut(s) 541, 850
XspI CTAG 3 cut(s) 41, 446, 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.