Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008101.1

Orthogroup ID

OG0000308

Physical Location & Seq

Genomic Coordinates Forward (+)

18538 .. 22079

Gene Structure 3542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008101.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

atggaggacattgacgctatggcaacccgactggcgttgtctttggcactggcggaggggaaaagaacactggatctgaggccatccaagggcaagggtctacgccaaccagaggtgtatatggttggcaagttactcacggcaagggagtataggaaacgttcttttttggggatgtttcgatctgcatggcatgttggtggagatctgcaggtggagccggcagcaagggaccgagttcttttctcattctcggatccggtggaccgcgctcgtgtgtggcgtggcggtccgtggggtttcaaccgagcccctgtagcactagcggaatatgatgggatcgaaccagtcaaacaagtgctgctgcaacgttcttcctattgggttaccttgttggatgtgccgccgacgttccgatctgaaagagtgatgcgtatgattggcaacaccattggtgatctaaaggaatgggaccgaccggcattccggcgaggtgtactgcaggtcagggtggagatcgagttttcacagcccatacttactcaacgtctctttcgatgcaactgctgtggatttgtaacccatgtggggttaccgtgctctggcccggtgctggaagatagggttggacatgatgggcctcgttcggtggagcagcgttctttccttcctcagaggcctcgacgtcaagtcaccatccgagaaattgaagaaaacaatgagcatgcatctccaattacggggaagaggaggaaaagaaccggtgatgtttcggtgtctccgaagaagccaaggctgagtttggcaattggtaagcacaatattgatgctgccactatgggtttaattgcacctgctatgagtaagtcaaacaagaagaagcgtggtcgacctgctggtagtcttaacaagataccatatggtactgctgacaaaaatcagggcactcgtagcgtggctttgatcgataataacgatataatagtagttggcacacgtatatataacacccacctccacacacccggtcacatccgcaaggcactgcaatttcagtcacacacgttcaaaccaaagcaaccagattctctcttggagatcaacgcaatgggtttgaaggaggagtttgaggagcatgctgagaaagccaagacccttccagagacgacaaccaatgagagcaagcttatcctgtatgggttgtacaagcaagccactgttggagatgttaacaccgcccgtcccggaatgttcaatttgagggacagagcaaagtgggatgcatggaaggctgttgaaggcaaatccaaggatgaagccatgggcgattatgttacaaaggtgaagcagttgttggaagaagcaggagtttccacttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000062 GO:0000166 GO:0001666 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006869 GO:0006950 GO:0008150 GO:0008289 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0010876 GO:0016020 GO:0017076 GO:0030554 GO:0031210 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033218 GO:0036094 GO:0036293 GO:0043167 GO:0043168 GO:0043169 GO:0044424 GO:0044444 GO:0044464 GO:0048037 GO:0050662 GO:0050826 GO:0050896 GO:0050997 GO:0051179 GO:0051234 GO:0070405 GO:0070482 GO:0071702 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901567 GO:1901681

KEGG Pathways

Metabolic & Signaling

ko03320 map03320

Pfam Domains

Protein Families

ACBP

Protein Analysis

459

Amino Acids

51.58

Weight (kDa)

9.86

Isoelectric Point (pI)

50.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000308)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24891 FvH4_4g09031
rosa_multiflora	Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii	Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa	Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha	Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	202, 862
AatII	GACGTC	1 cut(s)	688
Acc36I	ACCTGC	4 cut(s)	202, 493, 862, 901
AccI	GTMKAC	2 cut(s)	100, 889
AccII	CGCG	1 cut(s)	270
AciI	CCGC	7 cut(s)	53, 268, 288, 326, 404, 1036, 1236
AclI	AACGTT	2 cut(s)	160, 370
AclWI	GGATC	4 cut(s)	81, 251, 264, 347
AcyI	GRCGYC	1 cut(s)	685
AfaI	GTAC	3 cut(s)	498, 925, 1205
AfiI	CCNNNNNNNGG	6 cut(s)	89, 112, 588, 602, 613, 740
AflIII	ACRYGT	2 cut(s)	995, 1062
AgeI	ACCGGT	1 cut(s)	761
AgsI	TTSAA	6 cut(s)	304, 710, 1069, 1117, 1255, 1298
AhdI	GACNNNNNGTC	1 cut(s)	689
AjuI	GAANNNNNNNTTGG	4 cut(s)	609, 641, 1337, 1369
AluBI	AGCT	1 cut(s)	1186
AluI	AGCT	1 cut(s)	1186
Alw21I	GWGCWC	1 cut(s)	602
Alw26I	GTCTC	3 cut(s)	554, 783, 1157
AlwI	GGATC	4 cut(s)	81, 251, 264, 347
AoxI	GGCC	4 cut(s)	80, 604, 638, 677
ApeKI	GCWGC	5 cut(s)	224, 361, 364, 655, 830
AsiGI	ACCGGT	1 cut(s)	761
AspLEI	GCGC	1 cut(s)	272
AspS9I	GGNCC	6 cut(s)	232, 265, 290, 472, 605, 638
AsuC2I	CCSGG	3 cut(s)	608, 1026, 1245
AsuHPI	GGTGA	4 cut(s)	467, 685, 776, 1354
AvaII	GGWCC	4 cut(s)	232, 265, 290, 472
BaeGI	GKGCMC	1 cut(s)	947
BamHI	GGATCC	1 cut(s)	256
BanII	GRGCYC	1 cut(s)	313
BauI	CACGAG	1 cut(s)	273
Bbv12I	GWGCWC	1 cut(s)	602
BbvI	GCAGC	5 cut(s)	236, 348, 351, 667, 817
BccI	CCATC	4 cut(s)	91, 329, 629, 704
BceAI	ACGGC	1 cut(s)	156
BcgI	CGANNNNNNTGC	2 cut(s)	546, 580
BcnI	CCSGG	3 cut(s)	608, 1026, 1245
BcoDI	GTCTC	3 cut(s)	554, 783, 1157
BfaI	CTAG	1 cut(s)	323
BfmI	CTRYAG	3 cut(s)	209, 315, 500
BfuAI	ACCTGC	4 cut(s)	202, 493, 862, 901
BglII	AGATCT	1 cut(s)	205
BisI	GCNGC	6 cut(s)	225, 362, 365, 404, 656, 831
BlsI	GCNGC	6 cut(s)	226, 363, 366, 405, 657, 832
Bme1390I	CCNGG	3 cut(s)	608, 1026, 1245
Bme18I	GGWCC	4 cut(s)	232, 265, 290, 472
BmeRI	GACNNNNNGTC	1 cut(s)	689
BmgT120I	GGNCC	6 cut(s)	232, 265, 290, 472, 605, 638
BmiI	GGNNCC	4 cut(s)	219, 233, 258, 473
BmrFI	CCNGG	3 cut(s)	608, 1026, 1245
BmsI	GCATC	5 cut(s)	420, 548, 737, 817, 1270
BpuMI	CCSGG	3 cut(s)	608, 1026, 1245
Bsa29I	ATCGAT	1 cut(s)	966
BsaAI	YACGTR	1 cut(s)	998
BsaHI	GRCGYC	1 cut(s)	685
BsaJI	CCNNGG	5 cut(s)	87, 293, 791, 1308, 1320
BsaWI	WCCGGW	2 cut(s)	259, 761
BsaXI	ACNNNNNCTCC	2 cut(s)	506, 536
Bsc4I	CCNNNNNNNGG	6 cut(s)	89, 112, 588, 602, 613, 740
Bse118I	RCCGGY	3 cut(s)	220, 478, 761
Bse1I	ACTGG	4 cut(s)	36, 54, 75, 347
Bse3DI	GCAATG	1 cut(s)	1113
BseCI	ATCGAT	1 cut(s)	966
BseDI	CCNNGG	5 cut(s)	87, 293, 791, 1308, 1320
BseGI	GGATG	7 cut(s)	83, 180, 403, 696, 1032, 1285, 1318
BseLI	CCNNNNNNNGG	6 cut(s)	89, 112, 588, 602, 613, 740
BseMI	GCAATG	1 cut(s)	1113
BseMII	CTCAG	4 cut(s)	68, 686, 788, 1131
BseNI	ACTGG	4 cut(s)	36, 54, 75, 347
BseRI	GAGGAG	3 cut(s)	763, 1136, 1145
BseSI	GKGCMC	1 cut(s)	947
BseXI	GCAGC	5 cut(s)	236, 348, 351, 667, 817
Bsh1236I	CGCG	1 cut(s)	270
Bsh1285I	CGRYCG	1 cut(s)	479
BshFI	GGCC	4 cut(s)	82, 606, 640, 679
BshTI	ACCGGT	1 cut(s)	761
BshVI	ATCGAT	1 cut(s)	966
BsiEI	CGRYCG	1 cut(s)	479
BsiHKAI	GWGCWC	1 cut(s)	602
BsiSI	CCGG	8 cut(s)	221, 260, 479, 487, 608, 762, 1026, 1245
BslFI	GGGAC	4 cut(s)	245, 485, 1227, 1277
BslI	CCNNNNNNNGG	6 cut(s)	89, 112, 588, 602, 613, 740
BsmAI	GTCTC	3 cut(s)	554, 783, 1157
BsmBI	CGTCTC	2 cut(s)	554, 1157
BsmFI	GGGAC	4 cut(s)	245, 485, 1227, 1277
BsmI	GAATGC	1 cut(s)	482
BsnI	GGCC	4 cut(s)	82, 606, 640, 679
Bsp1286I	GDGCHC	3 cut(s)	313, 602, 947
Bsp1407I	TGTACA	1 cut(s)	1203
Bsp19I	CCATGG	1 cut(s)	1320
BspACI	CCGC	7 cut(s)	53, 268, 288, 326, 404, 1036, 1236
BspANI	GGCC	4 cut(s)	82, 606, 640, 679
BspCNI	CTCAG	4 cut(s)	69, 685, 789, 1132
BspDI	ATCGAT	1 cut(s)	966
BspFNI	CGCG	1 cut(s)	270
BspLI	GGNNCC	4 cut(s)	219, 233, 258, 473
BspMAI	CTGCAG	2 cut(s)	213, 504
BspMI	ACCTGC	4 cut(s)	202, 493, 862, 901
BspPI	GGATC	4 cut(s)	81, 251, 264, 347
BsrDI	GCAATG	1 cut(s)	1113
BsrFI	RCCGGY	3 cut(s)	220, 478, 761
BsrGI	TGTACA	1 cut(s)	1203
BsrI	ACTGG	4 cut(s)	36, 54, 75, 347
BssAI	RCCGGY	3 cut(s)	220, 478, 761
BssECI	CCNNGG	5 cut(s)	87, 293, 791, 1308, 1320
BssNI	GRCGYC	1 cut(s)	685
BssSI	CACGAG	1 cut(s)	273
BssT1I	CCWWGG	4 cut(s)	87, 791, 1308, 1320
Bst2BI	CACGAG	1 cut(s)	273
Bst4CI	ACNGT	2 cut(s)	597, 1219
Bst6I	CTCTTC	1 cut(s)	740
BstACI	GRCGYC	1 cut(s)	685
BstAUI	TGTACA	1 cut(s)	1203
BstBAI	YACGTR	1 cut(s)	998
BstC8I	GCNNGC	5 cut(s)	222, 726, 1137, 1184, 1212
BstDEI	CTNAG	4 cut(s)	77, 672, 797, 1140
BstDSI	CCRYGG	2 cut(s)	293, 1320
BstEII	GGTNACC	2 cut(s)	385, 591
BstF5I	GGATG	7 cut(s)	83, 180, 403, 696, 1032, 1285, 1318
BstFNI	CGCG	1 cut(s)	270
BstHHI	GCGC	1 cut(s)	272
BstMAI	GTCTC	3 cut(s)	554, 783, 1157
BstMCI	CGRYCG	1 cut(s)	479
BstMWI	GCNNNNNNNGC	5 cut(s)	217, 317, 951, 1145, 1289
BstNSI	RCATGY	3 cut(s)	197, 728, 1139
BstPI	GGTNACC	2 cut(s)	385, 591
BstSCI	CCNGG	3 cut(s)	606, 1024, 1243
BstSFI	CTRYAG	3 cut(s)	209, 315, 500
BstSLI	GKGCMC	1 cut(s)	947
BstUI	CGCG	1 cut(s)	270
BstV1I	GCAGC	5 cut(s)	236, 348, 351, 667, 817
BstX2I	RGATCY	3 cut(s)	73, 205, 256
BstYI	RGATCY	3 cut(s)	73, 205, 256
Bsu15I	ATCGAT	1 cut(s)	966
BsuRI	GGCC	4 cut(s)	82, 606, 640, 679
BsuTUI	ATCGAT	1 cut(s)	966
BtgI	CCRYGG	2 cut(s)	293, 1320
BtsCI	GGATG	7 cut(s)	83, 180, 403, 696, 1032, 1285, 1318
BtsI	GCAGTG	1 cut(s)	1043
BtsIMutI	CAGTG	4 cut(s)	47, 68, 1043, 1215
BveI	ACCTGC	4 cut(s)	202, 493, 862, 901
Cac8I	GCNNGC	5 cut(s)	222, 726, 1137, 1184, 1212
CfoI	GCGC	1 cut(s)	272
Cfr10I	RCCGGY	3 cut(s)	220, 478, 761
Cfr13I	GGNCC	6 cut(s)	232, 265, 290, 472, 605, 638
ClaI	ATCGAT	1 cut(s)	966
CpoI	CGGWCCG	1 cut(s)	290
CseI	GACGC	1 cut(s)	23
Csp6I	GTAC	3 cut(s)	497, 924, 1204
CspAI	ACCGGT	1 cut(s)	761
CspCI	CAANNNNNGTGG	2 cut(s)	550, 585
CspI	CGGWCCG	1 cut(s)	290
CviAII	CATG	8 cut(s)	189, 194, 584, 632, 725, 1136, 1284, 1321
CviQI	GTAC	3 cut(s)	497, 924, 1204
DdeI	CTNAG	4 cut(s)	77, 672, 797, 1140
DriI	GACNNNNNGTC	1 cut(s)	689
Eam1104I	CTCTTC	1 cut(s)	740
Eam1105I	GACNNNNNGTC	1 cut(s)	689
EarI	CTCTTC	1 cut(s)	740
EciI	GGCGGA	1 cut(s)	68
Eco130I	CCWWGG	4 cut(s)	87, 791, 1308, 1320
Eco147I	AGGCCT	1 cut(s)	679
Eco24I	GRGCYC	1 cut(s)	313
Eco47I	GGWCC	4 cut(s)	232, 265, 290, 472
Eco91I	GGTNACC	2 cut(s)	385, 591
EcoO65I	GGTNACC	2 cut(s)	385, 591
EcoT14I	CCWWGG	4 cut(s)	87, 791, 1308, 1320
EcoT22I	ATGCAT	2 cut(s)	730, 1285
EcoT38I	GRGCYC	1 cut(s)	313
ErhI	CCWWGG	4 cut(s)	87, 791, 1308, 1320
Esp3I	CGTCTC	2 cut(s)	554, 1157
FaeI	CATG	8 cut(s)	192, 197, 587, 635, 728, 1139, 1287, 1324
FaqI	GGGAC	4 cut(s)	245, 485, 1227, 1277
FatI	CATG	8 cut(s)	188, 193, 583, 631, 724, 1135, 1283, 1320
FauNDI	CATATG	1 cut(s)	919
FblI	GTMKAC	2 cut(s)	100, 889
Fnu4HI	GCNGC	6 cut(s)	225, 362, 365, 404, 656, 831
FokI	GGATG	7 cut(s)	70, 187, 410, 683, 1019, 1292, 1325
FriOI	GRGCYC	1 cut(s)	313
Fsp4HI	GCNGC	6 cut(s)	225, 362, 365, 404, 656, 831
FspBI	CTAG	1 cut(s)	323
GlaI	GCGC	1 cut(s)	271
GluI	GCNGC	6 cut(s)	225, 362, 365, 404, 656, 831
HaeIII	GGCC	4 cut(s)	82, 606, 640, 679
HapII	CCGG	8 cut(s)	221, 260, 479, 487, 608, 762, 1026, 1245
HgaI	GACGC	1 cut(s)	23
HhaI	GCGC	1 cut(s)	272
Hin1I	GRCGYC	1 cut(s)	685
Hin1II	CATG	8 cut(s)	192, 197, 587, 635, 728, 1139, 1287, 1324
Hin6I	GCGC	1 cut(s)	270
HinP1I	GCGC	1 cut(s)	270
HincII	GTYRAC	2 cut(s)	890, 1231
HindII	GTYRAC	2 cut(s)	890, 1231
HindIII	AAGCTT	1 cut(s)	1184
HinfI	GANTC	1 cut(s)	1085
HpaI	GTTAAC	1 cut(s)	1231
HpaII	CCGG	8 cut(s)	221, 260, 479, 487, 608, 762, 1026, 1245
HphI	GGTGA	4 cut(s)	467, 685, 776, 1354
Hpy166II	GTNNAC	5 cut(s)	101, 265, 497, 890, 1231
Hpy188I	TCNGA	7 cut(s)	78, 256, 416, 421, 675, 701, 783
Hpy188III	TCNNGA	1 cut(s)	1160
Hpy8I	GTNNAC	5 cut(s)	101, 265, 497, 890, 1231
Hpy99I	CGWCG	2 cut(s)	412, 687
HpyAV	CCTTC	5 cut(s)	677, 1111, 1166, 1282, 1292
HpyCH4III	ACNGT	2 cut(s)	597, 1219
HpyCH4IV	ACGT	7 cut(s)	160, 370, 410, 547, 685, 997, 1064
HpyCH4V	TGCA	9 cut(s)	188, 211, 367, 502, 561, 728, 851, 1048, 1283
HpyF10VI	GCNNNNNNNGC	5 cut(s)	217, 317, 951, 1145, 1289
HpyF3I	CTNAG	4 cut(s)	77, 672, 797, 1140
HpySE526I	ACGT	7 cut(s)	160, 370, 410, 547, 685, 997, 1064
Hsp92I	GRCGYC	1 cut(s)	685
Hsp92II	CATG	8 cut(s)	192, 197, 587, 635, 728, 1139, 1287, 1324
HspAI	GCGC	1 cut(s)	270
KroI	GCCGGC	1 cut(s)	220
KroNI	GCCGGC	1 cut(s)	222
KspAI	GTTAAC	1 cut(s)	1231
LmnI	GCTCC	3 cut(s)	217, 652, 1132
Lsp1109I	GCAGC	5 cut(s)	236, 348, 351, 667, 817
LweI	GCATC	5 cut(s)	420, 548, 737, 817, 1270
MaeI	CTAG	1 cut(s)	323
MaeII	ACGT	7 cut(s)	160, 370, 410, 547, 685, 997, 1064
MaeIII	GTNAC	8 cut(s)	132, 385, 577, 591, 691, 1028, 1056, 1333
MboII	GAAGA	7 cut(s)	366, 629, 722, 757, 796, 889, 1370
MfeI	CAATTG	1 cut(s)	807
MflI	RGATCY	3 cut(s)	73, 205, 256
MhlI	GDGCHC	3 cut(s)	313, 602, 947
MluCI	AATT	6 cut(s)	705, 735, 807, 846, 1049, 1255
MmeI	TCCRAC	4 cut(s)	375, 607, 1201, 1335
Mph1103I	ATGCAT	2 cut(s)	730, 1285
MroNI	GCCGGC	1 cut(s)	220
MseI	TTAA	3 cut(s)	845, 906, 1230
MslI	CAYNNNNRTG	1 cut(s)	198
MspI	CCGG	8 cut(s)	221, 260, 479, 487, 608, 762, 1026, 1245
MspR9I	CCNGG	3 cut(s)	608, 1026, 1245
MunI	CAATTG	1 cut(s)	807
Mva1269I	GAATGC	1 cut(s)	482
MvnI	CGCG	1 cut(s)	270
MwoI	GCNNNNNNNGC	5 cut(s)	217, 317, 951, 1145, 1289
NaeI	GCCGGC	1 cut(s)	222
NciI	CCSGG	3 cut(s)	608, 1026, 1245
NcoI	CCATGG	1 cut(s)	1320
NdeI	CATATG	1 cut(s)	919
NgoMIV	GCCGGC	1 cut(s)	220
NlaIII	CATG	8 cut(s)	192, 197, 587, 635, 728, 1139, 1287, 1324
NlaIV	GGNNCC	4 cut(s)	219, 233, 258, 473
NmuCI	GTSAC	3 cut(s)	691, 1028, 1056
NsiI	ATGCAT	2 cut(s)	730, 1285
NspI	RCATGY	3 cut(s)	197, 728, 1139
PaeI	GCATGC	2 cut(s)	728, 1139
PaqCI	CACCTGC	2 cut(s)	202, 862
PceI	AGGCCT	1 cut(s)	679
PcsI	WCGNNNNNNNCGW	4 cut(s)	280, 553, 779, 972
PctI	GAATGC	1 cut(s)	482
PdiI	GCCGGC	1 cut(s)	222
PfeI	GAWTC	1 cut(s)	1085
PfoI	TCCNGGA	1 cut(s)	1243
PinAI	ACCGGT	1 cut(s)	761
PkrI	GCNGC	6 cut(s)	226, 363, 366, 405, 657, 832
Ppu21I	YACGTR	1 cut(s)	998
Psp1406I	AACGTT	2 cut(s)	160, 370
PspEI	GGTNACC	2 cut(s)	385, 591
PspN4I	GGNNCC	4 cut(s)	219, 233, 258, 473
PspPI	GGNCC	6 cut(s)	232, 265, 290, 472, 605, 638
PstI	CTGCAG	2 cut(s)	213, 504
PsuI	RGATCY	3 cut(s)	73, 205, 256
RsaI	GTAC	3 cut(s)	498, 925, 1205
RsaNI	GTAC	3 cut(s)	497, 924, 1204
RseI	CAYNNNNRTG	1 cut(s)	198
Rsr2I	CGGWCCG	1 cut(s)	290
RsrII	CGGWCCG	1 cut(s)	290
SalI	GTCGAC	1 cut(s)	888
SaqAI	TTAA	3 cut(s)	845, 906, 1230
SatI	GCNGC	6 cut(s)	225, 362, 365, 404, 656, 831
Sau96I	GGNCC	6 cut(s)	232, 265, 290, 472, 605, 638
ScrFI	CCNGG	3 cut(s)	608, 1026, 1245
SduI	GDGCHC	3 cut(s)	313, 602, 947
SfaNI	GCATC	5 cut(s)	420, 548, 737, 817, 1270
SfcI	CTRYAG	3 cut(s)	209, 315, 500
SinI	GGWCC	4 cut(s)	232, 265, 290, 472
SmiMI	CAYNNNNRTG	1 cut(s)	198
SphI	GCATGC	2 cut(s)	728, 1139
Sse9I	AATT	6 cut(s)	705, 735, 807, 846, 1049, 1255
SseBI	AGGCCT	1 cut(s)	679
SsiI	CCGC	7 cut(s)	53, 268, 288, 326, 404, 1036, 1236
SspI	AATATT	1 cut(s)	823
SspMI	CTAG	1 cut(s)	323
StuI	AGGCCT	1 cut(s)	679
StyD4I	CCNGG	3 cut(s)	606, 1024, 1243
StyI	CCWWGG	4 cut(s)	87, 791, 1308, 1320
TaaI	ACNGT	2 cut(s)	597, 1219
TaiI	ACGT	7 cut(s)	163, 373, 413, 550, 688, 1000, 1067
TaqI	TCGA	7 cut(s)	181, 342, 519, 556, 682, 889, 966
TaqII	GACCGA	2 cut(s)	249, 489
TasI	AATT	6 cut(s)	705, 735, 807, 846, 1049, 1255
TatI	WGTACW	2 cut(s)	496, 1203
TauI	GCSGC	1 cut(s)	406
TfiI	GAWTC	1 cut(s)	1085
Tru1I	TTAA	3 cut(s)	845, 906, 1230
Tru9I	TTAA	3 cut(s)	845, 906, 1230
TscAI	CASTG	4 cut(s)	54, 75, 1050, 1222
TseFI	GTSAC	3 cut(s)	691, 1028, 1056
TseI	GCWGC	5 cut(s)	224, 361, 364, 655, 830
Tsp45I	GTSAC	3 cut(s)	691, 1028, 1056
TspDTI	ATGAA	1 cut(s)	1329
TspGWI	ACGGA	1 cut(s)	282
TspRI	CASTG	4 cut(s)	54, 75, 1050, 1222
VpaK11BI	GGWCC	4 cut(s)	232, 265, 290, 472
XceI	RCATGY	3 cut(s)	197, 728, 1139
XmiI	GTMKAC	2 cut(s)	100, 889
XspI	CTAG	1 cut(s)	323
ZraI	GACGTC	1 cut(s)	686
Zsp2I	ATGCAT	2 cut(s)	730, 1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.