Rmu_sc0003633.1_g000041

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003633.1
OG0000308
Physical Location & Seq
Forward (+)
146291 .. 149336
3046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003633.1_g000041.1.cds

Sequence Viewer

Length: 1185 bp
atgattttggttgcacaaggaaaagaggcatatgccatgttatgccgggagaggatcctctcccggcataacatggcatatgcctcttttccttgtgcaaccaaaatcattgtggattacaggctacagagtatggattcagaatcccatgtgctcacgtgtcgagatcgctgggcacccacgtcgcaggtcaagacaaaagaggttcaagggttggtgactggatattggctggaaaggagcagggttgaggaaacaggtgaagatgatcgggttctcttctcctttttggatccggctgatagagctagggtttggaagggaggaccatggggctttaacagggctccaatcgcaattgcagactatgatggcgttgggcgaatctcgactgtaccattgaagacgtcgtcttactggatgacgttattgggtgttccccctgcctttcgatctgaaaggattatgcgactcataggtggtaccttgggtgatttcaaagagtatgacataacggctttccggcaaagggtaatgggtattagggttgagatcgagtatgctaagcctctattgttcaagcagagattctgggttgaagatgatgttcagttcctcgtaaagttcaagtatgacaaagtttttgggcggtgtgagcgttgtggattcattacccatgtcgacctcctgtgttccggcccggagttggaagaggataaaaaggagagtgcaggtgtggtggcacaaccgtctgcactagcagtattgcgagatgcgccagggacgagttctactgcacctagggttttggatactggtcaaaccctagttttcaatgctaagctacctaacaccatcccggaattttgtcttcctccagcagtggcagcagcacagcgtgggaagctgcagaacttggatgccgtgactatggggcttttggagaggccatctgaacatggtaagcaacaaaaaagaaagagaggccggcctctgggaagtttgaataaattgccttatggcatggcgggaaaaggaaaaaaggacaagaatgagggtgactcgggaaagaaggttccaagcaagagcaggaagaccaacctgatgccgagattgttagttgctgaggggactgaagatggtaccacttccaaccctaaggggaaggagatggtgctttcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

394

Amino Acids

43.97

Weight (kDa)

9.39

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
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Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 722
AatII GACGTC 1 cut(s) 410
Acc36I ACCTGC 2 cut(s) 178, 722
Acc65I GGTACC 2 cut(s) 482, 1142
AccB1I GGYRCC 3 cut(s) 175, 482, 1142
AccI GTMKAC 1 cut(s) 681
AciI CCGC 2 cut(s) 649, 1028
AclWI GGATC 4 cut(s) 49, 62, 287, 300
AcsI RAATTY 1 cut(s) 863
AcuI CTGAAG 1 cut(s) 1155
AcvI CACGTG 1 cut(s) 159
AcyI GRCGYC 1 cut(s) 407
AdeI CACNNNGTG 1 cut(s) 899
AfaI GTAC 3 cut(s) 396, 484, 1144
AfiI CCNNNNNNNGG 3 cut(s) 529, 706, 994
AflIII ACRYGT 1 cut(s) 158
AgsI TTSAA 8 cut(s) 209, 403, 499, 580, 599, 628, 835, 1006
AjiI CACGTC 1 cut(s) 183
AjnI CCWGG 1 cut(s) 778
AloI GAACNNNNNNTCC 2 cut(s) 1059, 1091
AluBI AGCT 3 cut(s) 308, 844, 907
AluI AGCT 3 cut(s) 308, 844, 907
Alw21I GWGCWC 1 cut(s) 156
AlwI GGATC 4 cut(s) 49, 62, 287, 300
Ama87I CYCGRG 1 cut(s) 1063
AoxI GGCC 4 cut(s) 697, 947, 985, 989
ApeKI GCWGC 3 cut(s) 887, 890, 907
ApoI RAATTY 1 cut(s) 863
ArsI GACNNNNNNTTYG 2 cut(s) 626, 658
Asp718I GGTACC 2 cut(s) 482, 1142
AspA2I CCTAGG 1 cut(s) 800
AspLEI GCGC 1 cut(s) 778
AspS9I GGNCC 2 cut(s) 326, 698
AsuC2I CCSGG 4 cut(s) 47, 64, 701, 860
AsuHPI GGTGA 4 cut(s) 229, 272, 503, 1070
AvaI CYCGRG 1 cut(s) 1063
AvaII GGWCC 1 cut(s) 326
AvrII CCTAGG 1 cut(s) 800
AxyI CCTNAGG 1 cut(s) 1158
BaeGI GKGCMC 1 cut(s) 178
BamHI GGATCC 2 cut(s) 54, 292
BanI GGYRCC 3 cut(s) 175, 482, 1142
BanII GRGCYC 1 cut(s) 349
BbrPI CACGTG 1 cut(s) 159
BbsI GAAGAC 3 cut(s) 410, 863, 1100
Bbv12I GWGCWC 1 cut(s) 156
BbvCI CCTCAGC 1 cut(s) 1125
BbvI GCAGC 3 cut(s) 894, 899, 902
BccI CCATC 5 cut(s) 365, 863, 958, 1133, 1165
BceAI ACGGC 2 cut(s) 531, 908
BcgI CGANNNNNNTGC 2 cut(s) 165, 199
BciT130I CCWGG 1 cut(s) 780
BciVI GTATCC 1 cut(s) 805
BcnI CCSGG 4 cut(s) 47, 64, 701, 860
BfaI CTAG 4 cut(s) 309, 758, 801, 827
BfmI CTRYAG 2 cut(s) 125, 908
BfuAI ACCTGC 2 cut(s) 178, 722
BfuI GTATCC 1 cut(s) 805
BisI GCNGC 3 cut(s) 888, 891, 908
BlnI CCTAGG 1 cut(s) 800
BlpI GCTNAGC 2 cut(s) 564, 840
BlsI GCNGC 3 cut(s) 889, 892, 909
Bme1390I CCNGG 5 cut(s) 47, 64, 701, 780, 860
Bme18I GGWCC 1 cut(s) 326
BmeT110I CYCGRG 1 cut(s) 1063
BmgBI CACGTC 1 cut(s) 183
BmgT120I GGNCC 2 cut(s) 326, 698
BmiI GGNNCC 7 cut(s) 56, 177, 294, 348, 484, 1077, 1144
BmrFI CCNGG 5 cut(s) 47, 64, 701, 780, 860
BmsI GCATC 3 cut(s) 763, 910, 1095
BpiI GAAGAC 3 cut(s) 410, 863, 1100
BplI GAGNNNNNCTC 2 cut(s) 1046, 1078
BpmI CTGGAG 1 cut(s) 861
Bpu10I CCTNAGC 1 cut(s) 1125
Bpu1102I GCTNAGC 2 cut(s) 564, 840
BpuMI CCSGG 4 cut(s) 47, 64, 701, 860
BsaAI YACGTR 1 cut(s) 159
BsaHI GRCGYC 1 cut(s) 407
BsaJI CCNNGG 4 cut(s) 329, 486, 779, 800
Bsc4I CCNNNNNNNGG 3 cut(s) 529, 706, 994
Bse118I RCCGGY 1 cut(s) 987
Bse1I ACTGG 3 cut(s) 226, 422, 820
Bse21I CCTNAGG 1 cut(s) 1158
BseBI CCWGG 1 cut(s) 780
BseDI CCNNGG 4 cut(s) 329, 486, 779, 800
BseGI GGATG 3 cut(s) 426, 855, 925
BseLI CCNNNNNNNGG 3 cut(s) 529, 706, 994
BseMII CTCAG 1 cut(s) 1116
BseNI ACTGG 3 cut(s) 226, 422, 820
BseSI GKGCMC 1 cut(s) 178
BseXI GCAGC 3 cut(s) 894, 899, 902
BseYI CCCAGC 1 cut(s) 171
BsgI GTGCAG 3 cut(s) 738, 750, 780
BshFI GGCC 4 cut(s) 699, 949, 987, 991
BshNI GGYRCC 3 cut(s) 175, 482, 1142
BsiHKAI GWGCWC 1 cut(s) 156
BsiHKCI CYCGRG 1 cut(s) 1063
BsiSI CCGG 8 cut(s) 46, 64, 296, 523, 696, 701, 860, 988
BslFI GGGAC 2 cut(s) 796, 1144
BslI CCNNNNNNNGG 3 cut(s) 529, 706, 994
BsmFI GGGAC 2 cut(s) 796, 1144
BsnI GGCC 4 cut(s) 699, 949, 987, 991
BsoBI CYCGRG 1 cut(s) 1063
Bsp1286I GDGCHC 3 cut(s) 156, 178, 349
Bsp143I GATC 6 cut(s) 54, 166, 268, 292, 452, 552
Bsp1720I GCTNAGC 2 cut(s) 564, 840
Bsp19I CCATGG 1 cut(s) 329
BspACI CCGC 2 cut(s) 649, 1028
BspANI GGCC 4 cut(s) 699, 949, 987, 991
BspCNI CTCAG 1 cut(s) 1117
BspLI GGNNCC 7 cut(s) 56, 177, 294, 348, 484, 1077, 1144
BspMAI CTGCAG 1 cut(s) 912
BspMI ACCTGC 2 cut(s) 178, 722
BspPI GGATC 4 cut(s) 49, 62, 287, 300
BspT107I GGYRCC 3 cut(s) 175, 482, 1142
BsrFI RCCGGY 1 cut(s) 987
BsrI ACTGG 3 cut(s) 226, 422, 820
BssAI RCCGGY 1 cut(s) 987
BssECI CCNNGG 4 cut(s) 329, 486, 779, 800
BssMI GATC 6 cut(s) 54, 166, 268, 292, 452, 552
BssNI GRCGYC 1 cut(s) 407
BssT1I CCWWGG 3 cut(s) 329, 486, 800
Bst2UI CCWGG 1 cut(s) 780
Bst4CI ACNGT 2 cut(s) 394, 750
Bst6I CTCTTC 2 cut(s) 284, 705
BstACI GRCGYC 1 cut(s) 407
BstBAI YACGTR 1 cut(s) 159
BstC8I GCNNGC 1 cut(s) 989
BstDEI CTNAG 5 cut(s) 564, 840, 1125, 1158, 1182
BstDSI CCRYGG 1 cut(s) 329
BstF5I GGATG 3 cut(s) 426, 855, 925
BstHHI GCGC 1 cut(s) 778
BstKTI GATC 6 cut(s) 57, 169, 271, 295, 455, 555
BstMBI GATC 6 cut(s) 54, 166, 268, 292, 452, 552
BstMWI GCNNNNNNNGC 6 cut(s) 305, 353, 655, 775, 887, 904
BstNI CCWGG 1 cut(s) 780
BstSCI CCNGG 5 cut(s) 45, 62, 699, 778, 858
BstSFI CTRYAG 2 cut(s) 125, 908
BstSLI GKGCMC 1 cut(s) 178
BstV1I GCAGC 3 cut(s) 894, 899, 902
BstV2I GAAGAC 3 cut(s) 410, 863, 1100
BstX2I RGATCY 2 cut(s) 54, 292
BstYI RGATCY 2 cut(s) 54, 292
Bsu36I CCTNAGG 1 cut(s) 1158
BsuI GTATCC 1 cut(s) 805
BsuRI GGCC 4 cut(s) 699, 949, 987, 991
BtgI CCRYGG 1 cut(s) 329
BtrI CACGTC 1 cut(s) 183
BtsCI GGATG 3 cut(s) 426, 855, 925
BtsI GCAGTG 1 cut(s) 888
BtsIMutI CAGTG 1 cut(s) 888
BveI ACCTGC 2 cut(s) 178, 722
Cac8I GCNNGC 1 cut(s) 989
CfoI GCGC 1 cut(s) 778
Cfr10I RCCGGY 1 cut(s) 987
Cfr13I GGNCC 2 cut(s) 326, 698
Csp6I GTAC 3 cut(s) 395, 483, 1143
CviAII CATG 7 cut(s) 37, 73, 149, 330, 677, 959, 1024
CviQI GTAC 3 cut(s) 395, 483, 1143
DdeI CTNAG 5 cut(s) 564, 840, 1125, 1158, 1182
DpnI GATC 6 cut(s) 56, 168, 270, 294, 454, 554
DpnII GATC 6 cut(s) 54, 166, 268, 292, 452, 552
DraIII CACNNNGTG 1 cut(s) 899
Eam1104I CTCTTC 2 cut(s) 284, 705
EarI CTCTTC 2 cut(s) 284, 705
Eco130I CCWWGG 3 cut(s) 329, 486, 800
Eco24I GRGCYC 1 cut(s) 349
Eco47I GGWCC 1 cut(s) 326
Eco57I CTGAAG 1 cut(s) 1155
Eco72I CACGTG 1 cut(s) 159
Eco81I CCTNAGG 1 cut(s) 1158
Eco88I CYCGRG 1 cut(s) 1063
EcoRII CCWGG 1 cut(s) 778
EcoT14I CCWWGG 3 cut(s) 329, 486, 800
EcoT38I GRGCYC 1 cut(s) 349
ErhI CCWWGG 3 cut(s) 329, 486, 800
FaeI CATG 7 cut(s) 40, 76, 152, 333, 680, 962, 1027
FaqI GGGAC 2 cut(s) 796, 1144
FatI CATG 7 cut(s) 36, 72, 148, 329, 676, 958, 1023
FauI CCCGC 1 cut(s) 1021
FauNDI CATATG 2 cut(s) 31, 79
FblI GTMKAC 1 cut(s) 681
Fnu4HI GCNGC 3 cut(s) 888, 891, 908
FokI GGATG 3 cut(s) 433, 842, 932
FriOI GRGCYC 1 cut(s) 349
FseI GGCCGGCC 1 cut(s) 991
Fsp4HI GCNGC 3 cut(s) 888, 891, 908
FspBI CTAG 4 cut(s) 309, 758, 801, 827
GlaI GCGC 1 cut(s) 777
GluI GCNGC 3 cut(s) 888, 891, 908
GsaI CCCAGC 1 cut(s) 175
GsuI CTGGAG 1 cut(s) 861
HaeIII GGCC 4 cut(s) 699, 949, 987, 991
HapII CCGG 8 cut(s) 46, 64, 296, 523, 696, 701, 860, 988
HhaI GCGC 1 cut(s) 778
Hin1I GRCGYC 1 cut(s) 407
Hin1II CATG 7 cut(s) 40, 76, 152, 333, 680, 962, 1027
Hin6I GCGC 1 cut(s) 776
HinP1I GCGC 1 cut(s) 776
HincII GTYRAC 1 cut(s) 682
HindII GTYRAC 1 cut(s) 682
HinfI GANTC 7 cut(s) 137, 143, 384, 471, 588, 666, 1061
HpaII CCGG 8 cut(s) 46, 64, 296, 523, 696, 701, 860, 988
HphI GGTGA 4 cut(s) 229, 272, 503, 1070
Hpy166II GTNNAC 1 cut(s) 682
Hpy188I TCNGA 3 cut(s) 142, 457, 955
Hpy188III TCNNGA 4 cut(s) 164, 193, 388, 1065
Hpy8I GTNNAC 1 cut(s) 682
Hpy99I CGWCG 2 cut(s) 187, 412
HpyAV CCTTC 3 cut(s) 313, 1066, 1159
HpyCH4III ACNGT 2 cut(s) 394, 750
HpyCH4IV ACGT 4 cut(s) 158, 182, 407, 425
HpyCH4V TGCA 7 cut(s) 14, 98, 362, 731, 755, 797, 910
HpyF10VI GCNNNNNNNGC 6 cut(s) 305, 353, 655, 775, 887, 904
HpyF3I CTNAG 5 cut(s) 564, 840, 1125, 1158, 1182
HpySE526I ACGT 4 cut(s) 158, 182, 407, 425
Hsp92I GRCGYC 1 cut(s) 407
Hsp92II CATG 7 cut(s) 40, 76, 152, 333, 680, 962, 1027
HspAI GCGC 1 cut(s) 776
KpnI GGTACC 2 cut(s) 486, 1146
KroI GCCGGC 1 cut(s) 987
KroNI GCCGGC 1 cut(s) 989
Kzo9I GATC 6 cut(s) 54, 166, 268, 292, 452, 552
LmnI GCTCC 2 cut(s) 240, 352
Lsp1109I GCAGC 3 cut(s) 894, 899, 902
LweI GCATC 3 cut(s) 763, 910, 1095
MaeI CTAG 4 cut(s) 309, 758, 801, 827
MaeII ACGT 4 cut(s) 158, 182, 407, 425
MaeIII GTNAC 3 cut(s) 217, 925, 1058
MalI GATC 6 cut(s) 56, 168, 270, 294, 454, 554
MboI GATC 6 cut(s) 54, 166, 268, 292, 452, 552
MboII GAAGA 8 cut(s) 271, 275, 415, 611, 722, 863, 1105, 1148
MfeI CAATTG 1 cut(s) 357
MflI RGATCY 2 cut(s) 54, 292
MhlI GDGCHC 3 cut(s) 156, 178, 349
MluCI AATT 3 cut(s) 357, 863, 1010
MlyI GAGTC 2 cut(s) 465, 1055
MmeI TCCRAC 2 cut(s) 687, 1176
MroNI GCCGGC 1 cut(s) 987
MseI TTAA 1 cut(s) 339
MspI CCGG 8 cut(s) 46, 64, 296, 523, 696, 701, 860, 988
MspR9I CCNGG 5 cut(s) 47, 64, 701, 780, 860
MunI CAATTG 1 cut(s) 357
MvaI CCWGG 1 cut(s) 780
MwoI GCNNNNNNNGC 6 cut(s) 305, 353, 655, 775, 887, 904
NaeI GCCGGC 1 cut(s) 989
NciI CCSGG 4 cut(s) 47, 64, 701, 860
NcoI CCATGG 1 cut(s) 329
NdeI CATATG 2 cut(s) 31, 79
NdeII GATC 6 cut(s) 54, 166, 268, 292, 452, 552
NgoMIV GCCGGC 1 cut(s) 987
NlaIII CATG 7 cut(s) 40, 76, 152, 333, 680, 962, 1027
NlaIV GGNNCC 7 cut(s) 56, 177, 294, 348, 484, 1077, 1144
NmeAIII GCCGAG 1 cut(s) 1134
NmuCI GTSAC 3 cut(s) 217, 925, 1058
PaqCI CACCTGC 1 cut(s) 722
PdiI GCCGGC 1 cut(s) 989
PfeI GAWTC 5 cut(s) 137, 143, 384, 588, 666
PflFI GACNNNGTC 1 cut(s) 409
PfoI TCCNGGA 1 cut(s) 858
PkrI GCNGC 3 cut(s) 889, 892, 909
PleI GAGTC 2 cut(s) 465, 1055
PmaCI CACGTG 1 cut(s) 159
PmlI CACGTG 1 cut(s) 159
PpsI GAGTC 2 cut(s) 465, 1055
Ppu21I YACGTR 1 cut(s) 159
Psp6I CCWGG 1 cut(s) 778
PspCI CACGTG 1 cut(s) 159
PspFI CCCAGC 1 cut(s) 171
PspGI CCWGG 1 cut(s) 778
PspN4I GGNNCC 7 cut(s) 56, 177, 294, 348, 484, 1077, 1144
PspPI GGNCC 2 cut(s) 326, 698
PstI CTGCAG 1 cut(s) 912
PsuI RGATCY 2 cut(s) 54, 292
PsyI GACNNNGTC 1 cut(s) 409
RigI GGCCGGCC 1 cut(s) 991
RsaI GTAC 3 cut(s) 396, 484, 1144
RsaNI GTAC 3 cut(s) 395, 483, 1143
SalI GTCGAC 1 cut(s) 680
SaqAI TTAA 1 cut(s) 339
SatI GCNGC 3 cut(s) 888, 891, 908
Sau3AI GATC 6 cut(s) 54, 166, 268, 292, 452, 552
Sau96I GGNCC 2 cut(s) 326, 698
SchI GAGTC 2 cut(s) 465, 1055
ScrFI CCNGG 5 cut(s) 47, 64, 701, 780, 860
SduI GDGCHC 3 cut(s) 156, 178, 349
SfaNI GCATC 3 cut(s) 763, 910, 1095
SfcI CTRYAG 2 cut(s) 125, 908
SinI GGWCC 1 cut(s) 326
Sse9I AATT 3 cut(s) 357, 863, 1010
SsiI CCGC 2 cut(s) 649, 1028
SspMI CTAG 4 cut(s) 309, 758, 801, 827
StyD4I CCNGG 5 cut(s) 45, 62, 699, 778, 858
StyI CCWWGG 3 cut(s) 329, 486, 800
TaaI ACNGT 2 cut(s) 394, 750
TaiI ACGT 4 cut(s) 161, 185, 410, 428
TaqI TCGA 5 cut(s) 163, 389, 451, 555, 681
TasI AATT 3 cut(s) 357, 863, 1010
TfiI GAWTC 5 cut(s) 137, 143, 384, 588, 666
Tru1I TTAA 1 cut(s) 339
Tru9I TTAA 1 cut(s) 339
TscAI CASTG 1 cut(s) 888
TseFI GTSAC 3 cut(s) 217, 925, 1058
TseI GCWGC 3 cut(s) 887, 890, 907
Tsp45I GTSAC 3 cut(s) 217, 925, 1058
TspDTI ATGAA 1 cut(s) 658
TspRI CASTG 1 cut(s) 888
Tth111I GACNNNGTC 1 cut(s) 409
VpaK11BI GGWCC 1 cut(s) 326
XapI RAATTY 1 cut(s) 863
XcmI CCANNNNNNNNNTGG 1 cut(s) 109
XmaJI CCTAGG 1 cut(s) 800
XmiI GTMKAC 1 cut(s) 681
XspI CTAG 4 cut(s) 309, 758, 801, 827
ZraI GACGTC 1 cut(s) 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.