Rmu_sc0003444.1_g000018

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003444.1
OG0000308
Physical Location & Seq
Forward (+)
51234 .. 52508
1275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003444.1_g000018.1.cds

Sequence Viewer

Length: 1275 bp
atggcaattgatgcaatggccgcatgtctcgcagcctctcttgctctggcggaggggaagaggccagtggatttacgtccatccaaaggactgcgacaacaggaggctttcatggtggggaagcttctcacagcgcgggactatacgcgccgctcgtttctgggaatgttccgatctgcttggagggtgaatggcactctccgggtggaggaaactggagaagatgaccgtgtgttattctctttttcagatccggccgataaaggtagggtttggaagggagggccatgggggttcaataaggctccaattgcacttgcagagtacgatggcatcggacggatctcggaggtgccattgaggacgtcgtcgtactggatgacgttattgggggttcctccggcctttcgatctgaaagaattatgaggcttattggtagcaccgtgggcgagttcaaagagtttgataaaccagctttccggcaacggactctgcgcatacgggtggagatcgagtatgcgaaacctatattgttcacacagaggttctgggttgaagatgacgtccagtttctagtcaagttcaaatatgataagatttttggacggtgtggacggtgtggttttgttatccacgttggcctcccatgctccggcccggaactggaggaggctgaagaggaggttgcgggagtagtggcacaaccatctaccttaacgatccttcgtgaagaacctgggaccagctccaatgtatctagggttccggctcctggcccgactctaatcttcaaagcaacaatacctagcactattccagagttctgtctccctccagaagtagttgcttcccagcgagcaaagagacaggtacagattagggagcttacagaaccacgacaccaggtcgagtctgtccttggtcaacgccgggatagagatggtgatgaggtacttatttctcccaagaaactgaaattgagtttggctattggcaaaaagaatctggatgcagtcactatgggactgttggaagggccatcaaagcagactaaacaactgaacagaaagagaggccgacctctaggaagtgtgaataaattgccgtatggcatggcgggaaaagggaaaaatcctaagaatgagggtgactcagggaagaaggttccaaacaagagcaggaagaccaacctgatgccgaggttgttagctgctgaaagaattgaagctggtactctctccaaccctaaggggaaggagatggtgctgtcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

424

Amino Acids

47.09

Weight (kDa)

9.83

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 368, 567
Acc16I TGCGCA 1 cut(s) 497
AccB1I GGYRCC 1 cut(s) 352
AccBSI CCGCTC 1 cut(s) 153
AccII CGCG 2 cut(s) 136, 148
AciI CCGC 6 cut(s) 21, 50, 136, 151, 689, 1118
AclWI GGATC 3 cut(s) 245, 350, 715
AcoI YGGCCR 2 cut(s) 18, 255
AcuI CTGAAG 1 cut(s) 696
AcyI GRCGYC 2 cut(s) 365, 564
AfaI GTAC 5 cut(s) 326, 374, 873, 954, 1234
AfiI CCNNNNNNNGG 5 cut(s) 86, 208, 653, 664, 773
AgsI TTSAA 6 cut(s) 298, 457, 557, 586, 793, 1226
AhdI GACNNNNNGTC 1 cut(s) 905
AjnI CCWGG 3 cut(s) 736, 772, 903
AjuI GAANNNNNNNTTGG 2 cut(s) 968, 1000
AluBI AGCT 6 cut(s) 124, 476, 747, 886, 1211, 1229
AluI AGCT 6 cut(s) 124, 476, 747, 886, 1211, 1229
Alw26I GTCTC 3 cut(s) 32, 833, 859
AlwI GGATC 3 cut(s) 245, 350, 715
ApeKI GCWGC 2 cut(s) 32, 1211
AspLEI GCGC 3 cut(s) 136, 150, 498
AspS9I GGNCC 5 cut(s) 284, 656, 741, 776, 1037
AsuC2I CCSGG 3 cut(s) 203, 659, 932
AsuHPI GGTGA 3 cut(s) 199, 956, 1160
AvaII GGWCC 1 cut(s) 741
AxyI CCTNAGG 1 cut(s) 1248
BanI GGYRCC 1 cut(s) 352
BbsI GAAGAC 1 cut(s) 1190
BbvI GCAGC 2 cut(s) 44, 1198
BccI CCATC 6 cut(s) 88, 323, 715, 935, 1048, 1255
BceAI ACGGC 1 cut(s) 1090
BciT130I CCWGG 3 cut(s) 738, 774, 905
BcnI CCSGG 3 cut(s) 203, 659, 932
BcoDI GTCTC 3 cut(s) 32, 833, 859
BfaI CTAG 4 cut(s) 575, 759, 807, 1085
BisI GCNGC 4 cut(s) 21, 33, 151, 1212
BlsI GCNGC 4 cut(s) 22, 34, 152, 1213
Bme1390I CCNGG 6 cut(s) 203, 659, 738, 774, 905, 932
Bme18I GGWCC 1 cut(s) 741
BmeRI GACNNNNNGTC 1 cut(s) 905
BmgT120I GGNCC 5 cut(s) 284, 656, 741, 776, 1037
BmiI GGNNCC 7 cut(s) 306, 354, 396, 742, 765, 771, 1167
BmrFI CCNGG 6 cut(s) 203, 659, 738, 774, 905, 932
BmsI GCATC 3 cut(s) 342, 1000, 1185
BpiI GAAGAC 1 cut(s) 1190
BplI GAGNNNNNCTC 2 cut(s) 1136, 1168
BpmI CTGGAG 3 cut(s) 237, 686, 819
BpuMI CCSGG 3 cut(s) 203, 659, 932
BsaHI GRCGYC 2 cut(s) 365, 564
BsaJI CCNNGG 5 cut(s) 287, 444, 737, 919, 1199
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bsc4I CCNNNNNNNGG 5 cut(s) 86, 208, 653, 664, 773
Bse1I ACTGG 5 cut(s) 65, 220, 380, 568, 669
Bse21I CCTNAGG 1 cut(s) 1248
Bse3DI GCAATG 1 cut(s) 21
BseBI CCWGG 3 cut(s) 738, 774, 905
BseDI CCNNGG 5 cut(s) 287, 444, 737, 919, 1199
BseGI GGATG 3 cut(s) 80, 384, 1015
BseLI CCNNNNNNNGG 5 cut(s) 86, 208, 653, 664, 773
BseMI GCAATG 1 cut(s) 21
BseMII CTCAG 1 cut(s) 1167
BseNI ACTGG 5 cut(s) 65, 220, 380, 568, 669
BseRI GAGGAG 2 cut(s) 683, 695
BseX3I CGGCCG 1 cut(s) 255
BseXI GCAGC 2 cut(s) 44, 1198
BseYI CCCAGC 1 cut(s) 852
Bsh1236I CGCG 2 cut(s) 136, 148
Bsh1285I CGRYCG 1 cut(s) 258
BshNI GGYRCC 1 cut(s) 352
BsiEI CGRYCG 1 cut(s) 258
BsiSI CCGG 8 cut(s) 202, 254, 401, 481, 654, 659, 767, 931
BslFI GGGAC 3 cut(s) 152, 754, 1038
BslI CCNNNNNNNGG 5 cut(s) 86, 208, 653, 664, 773
BsmAI GTCTC 3 cut(s) 32, 833, 859
BsmFI GGGAC 3 cut(s) 152, 754, 1038
Bsp143I GATC 6 cut(s) 173, 250, 342, 410, 510, 720
Bsp19I CCATGG 1 cut(s) 287
BspACI CCGC 6 cut(s) 21, 50, 136, 151, 689, 1118
BspCNI CTCAG 1 cut(s) 1166
BspFNI CGCG 2 cut(s) 136, 148
BspLI GGNNCC 7 cut(s) 306, 354, 396, 742, 765, 771, 1167
BspPI GGATC 3 cut(s) 245, 350, 715
BspT107I GGYRCC 1 cut(s) 352
BsrBI CCGCTC 1 cut(s) 153
BsrDI GCAATG 1 cut(s) 21
BsrI ACTGG 5 cut(s) 65, 220, 380, 568, 669
BssECI CCNNGG 5 cut(s) 287, 444, 737, 919, 1199
BssMI GATC 6 cut(s) 173, 250, 342, 410, 510, 720
BssNI GRCGYC 2 cut(s) 365, 564
BssT1I CCWWGG 2 cut(s) 287, 919
Bst2UI CCWGG 3 cut(s) 738, 774, 905
Bst4CI ACNGT 5 cut(s) 230, 445, 609, 618, 1029
Bst6I CTCTTC 2 cut(s) 53, 672
BstACI GRCGYC 2 cut(s) 365, 564
BstAPI GCANNNNNTGC 1 cut(s) 11
BstC8I GCNNGC 1 cut(s) 858
BstDEI CTNAG 3 cut(s) 1137, 1153, 1248
BstDSI CCRYGG 2 cut(s) 287, 444
BstF5I GGATG 3 cut(s) 80, 384, 1015
BstFNI CGCG 2 cut(s) 136, 148
BstHHI GCGC 3 cut(s) 136, 150, 498
BstKTI GATC 6 cut(s) 176, 253, 345, 413, 513, 723
BstMAI GTCTC 3 cut(s) 32, 833, 859
BstMBI GATC 6 cut(s) 173, 250, 342, 410, 510, 720
BstMCI CGRYCG 1 cut(s) 258
BstMWI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 41, 311, 447, 648, 1045
BstNI CCWGG 3 cut(s) 738, 774, 905
BstNSI RCATGY 1 cut(s) 27
BstSCI CCNGG 6 cut(s) 201, 657, 736, 772, 903, 930
BstUI CGCG 2 cut(s) 136, 148
BstV1I GCAGC 2 cut(s) 44, 1198
BstV2I GAAGAC 1 cut(s) 1190
BstX2I RGATCY 2 cut(s) 250, 342
BstYI RGATCY 2 cut(s) 250, 342
BstZI CGGCCG 1 cut(s) 255
Bsu36I CCTNAGG 1 cut(s) 1248
BtgI CCRYGG 2 cut(s) 287, 444
BtsCI GGATG 3 cut(s) 80, 384, 1015
BtsIMutI CAGTG 1 cut(s) 72
Cac8I GCNNGC 1 cut(s) 858
CfoI GCGC 3 cut(s) 136, 150, 498
Cfr13I GGNCC 5 cut(s) 284, 656, 741, 776, 1037
CsiI ACCWGGT 1 cut(s) 903
Csp6I GTAC 5 cut(s) 325, 373, 872, 953, 1233
CviAII CATG 5 cut(s) 24, 112, 288, 648, 1114
CviQI GTAC 5 cut(s) 325, 373, 872, 953, 1233
DdeI CTNAG 3 cut(s) 1137, 1153, 1248
DpnI GATC 6 cut(s) 175, 252, 344, 412, 512, 722
DpnII GATC 6 cut(s) 173, 250, 342, 410, 510, 720
DriI GACNNNNNGTC 1 cut(s) 905
EaeI YGGCCR 2 cut(s) 18, 255
EagI CGGCCG 1 cut(s) 255
Eam1104I CTCTTC 2 cut(s) 53, 672
Eam1105I GACNNNNNGTC 1 cut(s) 905
EarI CTCTTC 2 cut(s) 53, 672
EciI GGCGGA 1 cut(s) 65
EclXI CGGCCG 1 cut(s) 255
Eco130I CCWWGG 2 cut(s) 287, 919
Eco47I GGWCC 1 cut(s) 741
Eco52I CGGCCG 1 cut(s) 255
Eco57I CTGAAG 1 cut(s) 696
Eco81I CCTNAGG 1 cut(s) 1248
EcoRII CCWGG 3 cut(s) 736, 772, 903
EcoT14I CCWWGG 2 cut(s) 287, 919
ErhI CCWWGG 2 cut(s) 287, 919
FaeI CATG 5 cut(s) 27, 115, 291, 651, 1117
FaqI GGGAC 3 cut(s) 152, 754, 1038
FatI CATG 5 cut(s) 23, 111, 287, 647, 1113
FauI CCCGC 3 cut(s) 129, 682, 1111
Fnu4HI GCNGC 4 cut(s) 21, 33, 151, 1212
FokI GGATG 3 cut(s) 67, 391, 1022
Fsp4HI GCNGC 4 cut(s) 21, 33, 151, 1212
FspBI CTAG 4 cut(s) 575, 759, 807, 1085
FspI TGCGCA 1 cut(s) 497
GlaI GCGC 3 cut(s) 135, 149, 497
GluI GCNGC 4 cut(s) 21, 33, 151, 1212
GsaI CCCAGC 1 cut(s) 856
GsuI CTGGAG 3 cut(s) 237, 686, 819
HapII CCGG 8 cut(s) 202, 254, 401, 481, 654, 659, 767, 931
HhaI GCGC 3 cut(s) 136, 150, 498
Hin1I GRCGYC 2 cut(s) 365, 564
Hin1II CATG 5 cut(s) 27, 115, 291, 651, 1117
Hin6I GCGC 3 cut(s) 134, 148, 496
HinP1I GCGC 3 cut(s) 134, 148, 496
HincII GTYRAC 1 cut(s) 926
HindII GTYRAC 1 cut(s) 926
HindIII AAGCTT 1 cut(s) 122
HinfI GANTC 5 cut(s) 490, 781, 911, 1003, 1151
HpaII CCGG 8 cut(s) 202, 254, 401, 481, 654, 659, 767, 931
HphI GGTGA 3 cut(s) 199, 956, 1160
Hpy166II GTNNAC 3 cut(s) 537, 614, 926
Hpy188I TCNGA 5 cut(s) 173, 250, 338, 349, 415
Hpy188III TCNNGA 4 cut(s) 728, 818, 836, 1007
Hpy8I GTNNAC 3 cut(s) 537, 614, 926
Hpy99I CGWCG 2 cut(s) 370, 373
HpyAV CCTTC 5 cut(s) 271, 734, 1028, 1156, 1249
HpyCH4III ACNGT 5 cut(s) 230, 445, 609, 618, 1029
HpyCH4IV ACGT 5 cut(s) 76, 365, 383, 564, 636
HpyCH4V TGCA 4 cut(s) 14, 314, 320, 1013
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 41, 311, 447, 648, 1045
HpyF3I CTNAG 3 cut(s) 1137, 1153, 1248
HpySE526I ACGT 5 cut(s) 76, 365, 383, 564, 636
Hsp92I GRCGYC 2 cut(s) 365, 564
Hsp92II CATG 5 cut(s) 27, 115, 291, 651, 1117
HspAI GCGC 3 cut(s) 134, 148, 496
Kzo9I GATC 6 cut(s) 173, 250, 342, 410, 510, 720
LmnI GCTCC 5 cut(s) 310, 656, 752, 775, 883
Lsp1109I GCAGC 2 cut(s) 44, 1198
LweI GCATC 3 cut(s) 342, 1000, 1185
MabI ACCWGGT 1 cut(s) 903
MaeI CTAG 4 cut(s) 575, 759, 807, 1085
MaeII ACGT 5 cut(s) 76, 365, 383, 564, 636
MaeIII GTNAC 2 cut(s) 1015, 1148
MalI GATC 6 cut(s) 175, 252, 344, 412, 512, 722
MbiI CCGCTC 1 cut(s) 153
MboI GATC 6 cut(s) 173, 250, 342, 410, 510, 720
MboII GAAGA 8 cut(s) 70, 233, 569, 689, 743, 781, 1171, 1195
MfeI CAATTG 2 cut(s) 6, 309
MflI RGATCY 2 cut(s) 250, 342
MluCI AATT 6 cut(s) 6, 309, 420, 977, 1100, 1221
MlyI GAGTC 4 cut(s) 484, 775, 920, 1145
MmeI TCCRAC 2 cut(s) 1011, 1266
MseI TTAA 2 cut(s) 716, 1273
MslI CAYNNNNRTG 1 cut(s) 503
MspI CCGG 8 cut(s) 202, 254, 401, 481, 654, 659, 767, 931
MspR9I CCNGG 6 cut(s) 203, 659, 738, 774, 905, 932
MunI CAATTG 2 cut(s) 6, 309
MvaI CCWGG 3 cut(s) 738, 774, 905
MvnI CGCG 2 cut(s) 136, 148
MwoI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 41, 311, 447, 648, 1045
NciI CCSGG 3 cut(s) 203, 659, 932
NcoI CCATGG 1 cut(s) 287
NdeII GATC 6 cut(s) 173, 250, 342, 410, 510, 720
NlaIII CATG 5 cut(s) 27, 115, 291, 651, 1117
NlaIV GGNNCC 7 cut(s) 306, 354, 396, 742, 765, 771, 1167
NmeAIII GCCGAG 1 cut(s) 1224
NmuCI GTSAC 2 cut(s) 1015, 1148
NsbI TGCGCA 1 cut(s) 497
NspI RCATGY 1 cut(s) 27
PcsI WCGNNNNNNNCGW 1 cut(s) 152
PfeI GAWTC 1 cut(s) 1003
PflFI GACNNNGTC 1 cut(s) 367
PkrI GCNGC 4 cut(s) 22, 34, 152, 1213
PleI GAGTC 4 cut(s) 484, 775, 919, 1145
PpsI GAGTC 4 cut(s) 484, 775, 919, 1145
Psp6I CCWGG 3 cut(s) 736, 772, 903
PspFI CCCAGC 1 cut(s) 852
PspGI CCWGG 3 cut(s) 736, 772, 903
PspN4I GGNNCC 7 cut(s) 306, 354, 396, 742, 765, 771, 1167
PspPI GGNCC 5 cut(s) 284, 656, 741, 776, 1037
PsrI GAACNNNNNNTAC 2 cut(s) 747, 779
PsuI RGATCY 2 cut(s) 250, 342
PsyI GACNNNGTC 1 cut(s) 367
RsaI GTAC 5 cut(s) 326, 374, 873, 954, 1234
RsaNI GTAC 5 cut(s) 325, 373, 872, 953, 1233
RseI CAYNNNNRTG 1 cut(s) 503
SaqAI TTAA 2 cut(s) 716, 1273
SatI GCNGC 4 cut(s) 21, 33, 151, 1212
Sau3AI GATC 6 cut(s) 173, 250, 342, 410, 510, 720
Sau96I GGNCC 5 cut(s) 284, 656, 741, 776, 1037
SchI GAGTC 4 cut(s) 484, 775, 920, 1145
ScrFI CCNGG 6 cut(s) 203, 659, 738, 774, 905, 932
SexAI ACCWGGT 1 cut(s) 903
SfaNI GCATC 3 cut(s) 342, 1000, 1185
SinI GGWCC 1 cut(s) 741
SmiMI CAYNNNNRTG 1 cut(s) 503
Sse9I AATT 6 cut(s) 6, 309, 420, 977, 1100, 1221
SsiI CCGC 6 cut(s) 21, 50, 136, 151, 689, 1118
SspMI CTAG 4 cut(s) 575, 759, 807, 1085
StyD4I CCNGG 6 cut(s) 201, 657, 736, 772, 903, 930
StyI CCWWGG 2 cut(s) 287, 919
TaaI ACNGT 5 cut(s) 230, 445, 609, 618, 1029
TaiI ACGT 5 cut(s) 79, 368, 386, 567, 639
TaqI TCGA 3 cut(s) 409, 513, 909
TasI AATT 6 cut(s) 6, 309, 420, 977, 1100, 1221
TauI GCSGC 2 cut(s) 23, 153
TfiI GAWTC 1 cut(s) 1003
Tru1I TTAA 2 cut(s) 716, 1273
Tru9I TTAA 2 cut(s) 716, 1273
TscAI CASTG 1 cut(s) 72
TseFI GTSAC 2 cut(s) 1015, 1148
TseI GCWGC 2 cut(s) 32, 1211
Tsp45I GTSAC 2 cut(s) 1015, 1148
TspDTI ATGAA 1 cut(s) 100
TspGWI ACGGA 2 cut(s) 355, 502
TspRI CASTG 1 cut(s) 72
Tth111I GACNNNGTC 1 cut(s) 367
VpaK11BI GGWCC 1 cut(s) 741
XceI RCATGY 1 cut(s) 27
XspI CTAG 4 cut(s) 575, 759, 807, 1085
ZraI GACGTC 2 cut(s) 366, 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.