Rmu_ssc0000419.1_g000008

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000419.1
OG0000308
Physical Location & Seq
Reverse (-)
26028 .. 27252
1225 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000419.1_g000008.1.cds

Sequence Viewer

Length: 942 bp
atggcaaagatcgacgcaatggcagcccgcctggcctcctccctagcccttgctgatgggaaacaactggtggatctacgcccgtccaaggggattaatggtagcctccgagtggaggaggtcggagaagatgatcgagttttgttcaccttcacatacccaaatgatgttgatcgtgtttggaaaggtggaccatggggctataacagagctccgatagcccttgctccatatgacggtgtcagcccggtggtggatgtaaccctcaagaagtcatcatactggatgacgctgcaaggaataccacctgcattcgaatcgaatcgggtcatgcgcatccgggttgagatcgactacttaaagcctttgctattccggcgtcgattctgggtcgaagacgtagtccagttcatagtacagttcaggtatgacaagatctttggtcgttgcggcacctgtggactcgttactcatgtcggcctcccttgcttcggaccggagctcgttgaagatactgatacaccgatagggacagtagcaccacccacaactttggctgccctacgggaacaaccggtattgaaccctaacttcaatagggtggtgataaacagccaaaccctaatcttcaaagctcatgtaccaaggagtataccagaagctcttctccctcagtcggtcatgaacatgcgacgcaataagagacaggtgcaaatttgggaactgcttgaaccaagacactgtgaaaatccaattactggattgcgtaggattagagaagatgatgagggagaggggacgtcctattggcagtgtaaacaaactaccatatggacaataggcaaagggaagaatgcaaagaaagatggagaatctgacaagatgaaaagcaagaagaccaacctgattccgaggttgttggctgctgatgatcgaggctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

313

Amino Acids

35.38

Weight (kDa)

9.23

Isoelectric Point (pI)

35.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 316
AatII GACGTC 1 cut(s) 803
Acc16I TGCGCA 1 cut(s) 335
Acc36I ACCTGC 1 cut(s) 316
AccB1I GGYRCC 1 cut(s) 452
AccB7I CCANNNNNTGG 1 cut(s) 758
AccI GTMKAC 1 cut(s) 652
AciI CCGC 2 cut(s) 28, 450
AclWI GGATC 1 cut(s) 81
AcsI RAATTY 1 cut(s) 714
AcyI GRCGYC 2 cut(s) 379, 800
AfaI GTAC 2 cut(s) 417, 642
AfiI CCNNNNNNNGG 9 cut(s) 88, 89, 112, 115, 236, 253, 491, 676, 758
AgeI ACCGGT 1 cut(s) 574
AgsI TTSAA 5 cut(s) 509, 583, 595, 631, 731
AjnI CCWGG 1 cut(s) 30
AluBI AGCT 4 cut(s) 212, 502, 635, 662
AluI AGCT 4 cut(s) 212, 502, 635, 662
Alw21I GWGCWC 2 cut(s) 214, 504
Alw26I GTCTC 1 cut(s) 697
AlwI GGATC 1 cut(s) 81
AoxI GGCC 2 cut(s) 33, 478
ApeKI GCWGC 4 cut(s) 23, 292, 557, 923
ApoI RAATTY 1 cut(s) 714
ArsI GACNNNNNNTTYG 4 cut(s) 387, 419, 422, 454
AseI ATTAAT 1 cut(s) 96
AsiGI ACCGGT 1 cut(s) 574
Asp700I GAANNNNTTC 1 cut(s) 663
AspLEI GCGC 1 cut(s) 336
AspS9I GGNCC 2 cut(s) 191, 494
AsuC2I CCSGG 2 cut(s) 248, 341
AsuHPI GGTGA 2 cut(s) 139, 616
AsuII TTCGAA 1 cut(s) 315
AvaII GGWCC 2 cut(s) 191, 494
BanI GGYRCC 1 cut(s) 452
BanII GRGCYC 2 cut(s) 214, 504
BarI GAAGNNNNNNTAC 2 cut(s) 263, 295
BbsI GAAGAC 2 cut(s) 402, 902
Bbv12I GWGCWC 2 cut(s) 214, 504
BbvI GCAGC 4 cut(s) 35, 279, 544, 910
BccI CCATC 2 cut(s) 50, 860
BcgI CGANNNNNNTGC 2 cut(s) 300, 334
BciT130I CCWGG 1 cut(s) 32
BcnI CCSGG 2 cut(s) 248, 341
BcoDI GTCTC 1 cut(s) 697
BfaI CTAG 1 cut(s) 44
BfuAI ACCTGC 1 cut(s) 316
BglI GCCNNNNNGGC 1 cut(s) 32
BglII AGATCT 1 cut(s) 435
BisI GCNGC 5 cut(s) 24, 293, 451, 558, 924
BlsI GCNGC 5 cut(s) 25, 294, 452, 559, 925
Bme1390I CCNGG 3 cut(s) 32, 248, 341
Bme18I GGWCC 2 cut(s) 191, 494
BmgT120I GGNCC 2 cut(s) 191, 494
BmiI GGNNCC 1 cut(s) 454
BmrFI CCNGG 3 cut(s) 32, 248, 341
BmsI GCATC 1 cut(s) 345
BpiI GAAGAC 2 cut(s) 402, 902
Bpu14I TTCGAA 1 cut(s) 315
BpuEI CTTGAG 1 cut(s) 251
BpuMI CCSGG 2 cut(s) 248, 341
BsaBI GATNNNNATC 1 cut(s) 171
BsaHI GRCGYC 2 cut(s) 379, 800
BsaJI CCNNGG 4 cut(s) 87, 194, 644, 911
BsaWI WCCGGW 2 cut(s) 496, 574
Bsc4I CCNNNNNNNGG 9 cut(s) 88, 89, 112, 115, 236, 253, 491, 676, 758
Bse118I RCCGGY 1 cut(s) 574
Bse1I ACTGG 4 cut(s) 72, 287, 406, 763
Bse3DI GCAATG 1 cut(s) 24
Bse8I GATNNNNATC 1 cut(s) 171
BseBI CCWGG 1 cut(s) 32
BseDI CCNNGG 4 cut(s) 87, 194, 644, 911
BseGI GGATG 3 cut(s) 262, 291, 336
BseJI GATNNNNATC 1 cut(s) 171
BseLI CCNNNNNNNGG 9 cut(s) 88, 89, 112, 115, 236, 253, 491, 676, 758
BseMI GCAATG 1 cut(s) 24
BseMII CTCAG 1 cut(s) 686
BseNI ACTGG 4 cut(s) 72, 287, 406, 763
BseRI GAGGAG 2 cut(s) 28, 131
BseXI GCAGC 4 cut(s) 35, 279, 544, 910
BshFI GGCC 2 cut(s) 35, 480
BshNI GGYRCC 1 cut(s) 452
BshTI ACCGGT 1 cut(s) 574
BsiHKAI GWGCWC 2 cut(s) 214, 504
BsiSI CCGG 5 cut(s) 248, 340, 376, 497, 575
BslFI GGGAC 2 cut(s) 544, 811
BslI CCNNNNNNNGG 9 cut(s) 88, 89, 112, 115, 236, 253, 491, 676, 758
BsmAI GTCTC 1 cut(s) 697
BsmFI GGGAC 2 cut(s) 544, 811
BsmI GAATGC 2 cut(s) 311, 859
BsnI GGCC 2 cut(s) 35, 480
Bsp119I TTCGAA 1 cut(s) 315
Bsp1286I GDGCHC 2 cut(s) 214, 504
Bsp143I GATC 7 cut(s) 9, 73, 133, 172, 348, 435, 931
Bsp19I CCATGG 1 cut(s) 194
BspACI CCGC 2 cut(s) 28, 450
BspANI GGCC 2 cut(s) 35, 480
BspCNI CTCAG 1 cut(s) 685
BspHI TCATGA 1 cut(s) 681
BspLI GGNNCC 1 cut(s) 454
BspMI ACCTGC 1 cut(s) 316
BspPI GGATC 1 cut(s) 81
BspQI GCTCTTC 1 cut(s) 669
BspT104I TTCGAA 1 cut(s) 315
BspT107I GGYRCC 1 cut(s) 452
BsrDI GCAATG 1 cut(s) 24
BsrFI RCCGGY 1 cut(s) 574
BsrI ACTGG 4 cut(s) 72, 287, 406, 763
BssAI RCCGGY 1 cut(s) 574
BssECI CCNNGG 4 cut(s) 87, 194, 644, 911
BssMI GATC 7 cut(s) 9, 73, 133, 172, 348, 435, 931
BssNAI GTATAC 1 cut(s) 653
BssNI GRCGYC 2 cut(s) 379, 800
BssT1I CCWWGG 3 cut(s) 87, 194, 644
Bst1107I GTATAC 1 cut(s) 653
Bst2UI CCWGG 1 cut(s) 32
Bst4CI ACNGT 4 cut(s) 239, 420, 535, 743
Bst6I CTCTTC 1 cut(s) 669
BstACI GRCGYC 2 cut(s) 379, 800
BstBI TTCGAA 1 cut(s) 315
BstC8I GCNNGC 1 cut(s) 28
BstDEI CTNAG 1 cut(s) 672
BstDSI CCRYGG 1 cut(s) 194
BstF5I GGATG 3 cut(s) 262, 291, 336
BstHHI GCGC 1 cut(s) 336
BstKTI GATC 7 cut(s) 12, 76, 136, 175, 351, 438, 934
BstMAI GTCTC 1 cut(s) 697
BstMBI GATC 7 cut(s) 9, 73, 133, 172, 348, 435, 931
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 218, 376, 486
BstNI CCWGG 1 cut(s) 32
BstNSI RCATGY 1 cut(s) 691
BstSCI CCNGG 3 cut(s) 30, 246, 339
BstV1I GCAGC 4 cut(s) 35, 279, 544, 910
BstV2I GAAGAC 2 cut(s) 402, 902
BstX2I RGATCY 2 cut(s) 73, 435
BstXI CCANNNNNNTGG 1 cut(s) 553
BstYI RGATCY 2 cut(s) 73, 435
BstZ17I GTATAC 1 cut(s) 653
BsuRI GGCC 2 cut(s) 35, 480
BtgI CCRYGG 1 cut(s) 194
BtsCI GGATG 3 cut(s) 262, 291, 336
BtsI GCAGTG 1 cut(s) 818
BtsIMutI CAGTG 2 cut(s) 739, 818
BveI ACCTGC 1 cut(s) 316
Cac8I GCNNGC 1 cut(s) 28
CciI TCATGA 1 cut(s) 681
CfoI GCGC 1 cut(s) 336
Cfr10I RCCGGY 1 cut(s) 574
Cfr13I GGNCC 2 cut(s) 191, 494
CpoI CGGWCCG 1 cut(s) 494
CseI GACGC 4 cut(s) 23, 298, 368, 702
Csp6I GTAC 2 cut(s) 416, 641
CspAI ACCGGT 1 cut(s) 574
CspI CGGWCCG 1 cut(s) 494
CviAII CATG 6 cut(s) 195, 331, 473, 638, 682, 688
CviQI GTAC 2 cut(s) 416, 641
DdeI CTNAG 1 cut(s) 672
DpnI GATC 7 cut(s) 11, 75, 135, 174, 350, 437, 933
DpnII GATC 7 cut(s) 9, 73, 133, 172, 348, 435, 931
Eam1104I CTCTTC 1 cut(s) 669
EarI CTCTTC 1 cut(s) 669
Ecl136II GAGCTC 2 cut(s) 212, 502
Eco130I CCWWGG 3 cut(s) 87, 194, 644
Eco24I GRGCYC 2 cut(s) 214, 504
Eco47I GGWCC 2 cut(s) 191, 494
Eco53kI GAGCTC 2 cut(s) 212, 502
EcoICRI GAGCTC 2 cut(s) 212, 502
EcoRII CCWGG 1 cut(s) 30
EcoT14I CCWWGG 3 cut(s) 87, 194, 644
EcoT38I GRGCYC 2 cut(s) 214, 504
ErhI CCWWGG 3 cut(s) 87, 194, 644
FaeI CATG 6 cut(s) 198, 334, 476, 641, 685, 691
FaqI GGGAC 2 cut(s) 544, 811
FatI CATG 6 cut(s) 194, 330, 472, 637, 681, 687
FauI CCCGC 1 cut(s) 35
FauNDI CATATG 2 cut(s) 232, 830
FblI GTMKAC 1 cut(s) 652
Fnu4HI GCNGC 5 cut(s) 24, 293, 451, 558, 924
FokI GGATG 3 cut(s) 269, 298, 323
FriOI GRGCYC 2 cut(s) 214, 504
Fsp4HI GCNGC 5 cut(s) 24, 293, 451, 558, 924
FspAI RTGCGCAY 1 cut(s) 335
FspBI CTAG 1 cut(s) 44
FspI TGCGCA 1 cut(s) 335
GlaI GCGC 1 cut(s) 335
GluI GCNGC 5 cut(s) 24, 293, 451, 558, 924
HaeIII GGCC 2 cut(s) 35, 480
HapII CCGG 5 cut(s) 248, 340, 376, 497, 575
HgaI GACGC 4 cut(s) 23, 298, 368, 702
HhaI GCGC 1 cut(s) 336
Hin1I GRCGYC 2 cut(s) 379, 800
Hin1II CATG 6 cut(s) 198, 334, 476, 641, 685, 691
Hin6I GCGC 1 cut(s) 334
HinP1I GCGC 1 cut(s) 334
HinfI GANTC 6 cut(s) 317, 322, 384, 462, 872, 907
HpaII CCGG 5 cut(s) 248, 340, 376, 497, 575
HphI GGTGA 2 cut(s) 139, 616
Hpy166II GTNNAC 5 cut(s) 147, 191, 461, 653, 818
Hpy188I TCNGA 6 cut(s) 110, 125, 216, 494, 877, 912
Hpy188III TCNNGA 2 cut(s) 268, 682
Hpy8I GTNNAC 5 cut(s) 147, 191, 461, 653, 818
Hpy99I CGWCG 3 cut(s) 17, 384, 696
HpyAV CCTTC 1 cut(s) 160
HpyCH4III ACNGT 4 cut(s) 239, 420, 535, 743
HpyCH4IV ACGT 2 cut(s) 399, 800
HpyCH4V TGCA 4 cut(s) 295, 311, 712, 857
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 218, 376, 486
HpyF3I CTNAG 1 cut(s) 672
HpySE526I ACGT 2 cut(s) 399, 800
Hsp92I GRCGYC 2 cut(s) 379, 800
Hsp92II CATG 6 cut(s) 198, 334, 476, 641, 685, 691
HspAI GCGC 1 cut(s) 334
Kzo9I GATC 7 cut(s) 9, 73, 133, 172, 348, 435, 931
LguI GCTCTTC 1 cut(s) 669
LmnI GCTCC 3 cut(s) 217, 232, 499
Lsp1109I GCAGC 4 cut(s) 35, 279, 544, 910
LweI GCATC 1 cut(s) 345
MaeI CTAG 1 cut(s) 44
MaeII ACGT 2 cut(s) 399, 800
MaeIII GTNAC 2 cut(s) 259, 466
MalI GATC 7 cut(s) 11, 75, 135, 174, 350, 437, 933
MboI GATC 7 cut(s) 9, 73, 133, 172, 348, 435, 931
MboII GAAGA 8 cut(s) 140, 407, 521, 619, 656, 791, 862, 907
MflI RGATCY 2 cut(s) 73, 435
MhlI GDGCHC 2 cut(s) 214, 504
MluCI AATT 2 cut(s) 714, 753
MlyI GAGTC 1 cut(s) 456
MmeI TCCRAC 1 cut(s) 103
MroXI GAANNNNTTC 1 cut(s) 663
MseI TTAA 2 cut(s) 96, 359
MslI CAYNNNNRTG 1 cut(s) 686
MspI CCGG 5 cut(s) 248, 340, 376, 497, 575
MspR9I CCNGG 3 cut(s) 32, 248, 341
Mva1269I GAATGC 2 cut(s) 311, 859
MvaI CCWGG 1 cut(s) 32
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 218, 376, 486
NciI CCSGG 2 cut(s) 248, 341
NcoI CCATGG 1 cut(s) 194
NdeI CATATG 2 cut(s) 232, 830
NdeII GATC 7 cut(s) 9, 73, 133, 172, 348, 435, 931
NlaIII CATG 6 cut(s) 198, 334, 476, 641, 685, 691
NlaIV GGNNCC 1 cut(s) 454
NsbI TGCGCA 1 cut(s) 335
NspI RCATGY 1 cut(s) 691
NspV TTCGAA 1 cut(s) 315
PagI TCATGA 1 cut(s) 681
PaqCI CACCTGC 1 cut(s) 316
PciSI GCTCTTC 1 cut(s) 669
PctI GAATGC 2 cut(s) 311, 859
PdmI GAANNNNTTC 1 cut(s) 663
PfeI GAWTC 5 cut(s) 317, 322, 384, 872, 907
PflFI GACNNNGTC 2 cut(s) 239, 401
PflMI CCANNNNNTGG 1 cut(s) 758
PinAI ACCGGT 1 cut(s) 574
PkrI GCNGC 5 cut(s) 25, 294, 452, 559, 925
PleI GAGTC 1 cut(s) 456
PpsI GAGTC 1 cut(s) 456
PshBI ATTAAT 1 cut(s) 96
Psp124BI GAGCTC 2 cut(s) 214, 504
Psp6I CCWGG 1 cut(s) 30
PspGI CCWGG 1 cut(s) 30
PspN4I GGNNCC 1 cut(s) 454
PspPI GGNCC 2 cut(s) 191, 494
PsuI RGATCY 2 cut(s) 73, 435
PsyI GACNNNGTC 2 cut(s) 239, 401
RsaI GTAC 2 cut(s) 417, 642
RsaNI GTAC 2 cut(s) 416, 641
RseI CAYNNNNRTG 1 cut(s) 686
Rsr2I CGGWCCG 1 cut(s) 494
RsrII CGGWCCG 1 cut(s) 494
SacI GAGCTC 2 cut(s) 214, 504
SapI GCTCTTC 1 cut(s) 669
SaqAI TTAA 2 cut(s) 96, 359
SatI GCNGC 5 cut(s) 24, 293, 451, 558, 924
Sau3AI GATC 7 cut(s) 9, 73, 133, 172, 348, 435, 931
Sau96I GGNCC 2 cut(s) 191, 494
SchI GAGTC 1 cut(s) 456
ScrFI CCNGG 3 cut(s) 32, 248, 341
SduI GDGCHC 2 cut(s) 214, 504
SfaNI GCATC 1 cut(s) 345
SfuI TTCGAA 1 cut(s) 315
SinI GGWCC 2 cut(s) 191, 494
SmiMI CAYNNNNRTG 1 cut(s) 686
SmlI CTYRAG 1 cut(s) 266
SmoI CTYRAG 1 cut(s) 266
Sse9I AATT 2 cut(s) 714, 753
SsiI CCGC 2 cut(s) 28, 450
SspMI CTAG 1 cut(s) 44
SstI GAGCTC 2 cut(s) 214, 504
StyD4I CCNGG 3 cut(s) 30, 246, 339
StyI CCWWGG 3 cut(s) 87, 194, 644
TaaI ACNGT 4 cut(s) 239, 420, 535, 743
TaiI ACGT 2 cut(s) 402, 803
TaqI TCGA 8 cut(s) 12, 136, 315, 320, 351, 382, 393, 934
TaqII GACCGA 1 cut(s) 667
TasI AATT 2 cut(s) 714, 753
TatI WGTACW 1 cut(s) 415
TauI GCSGC 1 cut(s) 453
TfiI GAWTC 5 cut(s) 317, 322, 384, 872, 907
Tru1I TTAA 2 cut(s) 96, 359
Tru9I TTAA 2 cut(s) 96, 359
TscAI CASTG 2 cut(s) 746, 818
TseI GCWGC 4 cut(s) 23, 292, 557, 923
TspDTI ATGAA 3 cut(s) 400, 698, 899
TspRI CASTG 2 cut(s) 746, 818
Tth111I GACNNNGTC 2 cut(s) 239, 401
Van91I CCANNNNNTGG 1 cut(s) 758
VpaK11BI GGWCC 2 cut(s) 191, 494
VspI ATTAAT 1 cut(s) 96
XapI RAATTY 1 cut(s) 714
XceI RCATGY 1 cut(s) 691
XmiI GTMKAC 1 cut(s) 652
XmnI GAANNNNTTC 1 cut(s) 663
XspI CTAG 1 cut(s) 44
ZraI GACGTC 1 cut(s) 801
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.