Rmu_sc0006413.1_g000015

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006413.1
OG0000308
Physical Location & Seq
Reverse (-)
124821 .. 126900
2080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006413.1_g000015.1.cds

Sequence Viewer

Length: 1104 bp
atgacaacgatcgatgcaatggcagcccgcctggcctcctccctagccctagctgacgggaagaaaccggtggatctgcgcccatccaagggattgagacaacctgaagcgttcatgattggcaagctccttacggcgaggcaatactctcgcagatcgttcctgggcatgtttcgagctgcatggaggattaatggcagcatccgggtggaggaagtcggagaagatgacagagttttgctctccttcacagacccatctgatgttgatcgtgtctggaaaggcggaccatggggctataacagagctccgatagccctgtcatcgtatgactgtgtcagctcggcggtggatgtacccctcatgaagtcatcgtactggatgacgctacaaggaattccaccggcattcagatcggagcgcattatgcgcctcattggcagcacgattggcgacctcaaggaaatcgatcgtccggcattcaagaatcgagtcatgcgtattcgggttgagatcgactatgtgaaacctctgttgttccgtcgtcgattctgggtagaagatgaagtccagttcatagtgcagttcagatatgacaagattttcggtcgctgcagcacttgtggattggttactcatgttggcctcccctgctccgggccggaactagttgaagacaatgatacaccgatgggggcagtagcaccacccgcctgtcatgcgggaacaaccgtgaacatgggattactagagggaccttccaatactatcgaacagcctaagaggaagaggggacccctaattggcagtgtcaacaaactaccatatgggacagtaggaaaagggaagaatgcaaagaaagatggagaatctgacaagacgaagagcaagaagaccaacctgatgccgaggttgttggctgctgatgagtctgaggtaagtacaagctctaaccctaaggggaaagagcaggtgtgtaaggccccgtttaaagattgttgggtttgctgtggtgatgcgtttgggctagttaggttggccgaagatggggtttggagtgatggcgcatggtttcacgcgccgccactggtggtggcgtgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

367

Amino Acids

40.53

Weight (kDa)

9.16

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
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Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 961
Acc36I ACCTGC 1 cut(s) 961
AccII CGCG 1 cut(s) 1079
AciI CCGC 6 cut(s) 28, 285, 347, 711, 722, 1082
AclWI GGATC 1 cut(s) 81
AcoI YGGCCR 1 cut(s) 1038
AcsI RAATTY 1 cut(s) 396
AcuI CTGAAG 1 cut(s) 126
AfaI GTAC 3 cut(s) 357, 377, 943
AfiI CCNNNNNNNGG 7 cut(s) 88, 89, 211, 656, 657, 803, 1047
AgeI ACCGGT 1 cut(s) 67
AgsI TTSAA 2 cut(s) 484, 674
AhlI ACTAGT 1 cut(s) 667
AjnI CCWGG 2 cut(s) 30, 162
AluBI AGCT 6 cut(s) 53, 127, 179, 308, 342, 948
AluI AGCT 6 cut(s) 53, 127, 179, 308, 342, 948
Alw21I GWGCWC 1 cut(s) 310
Alw26I GTCTC 1 cut(s) 91
AlwI GGATC 1 cut(s) 81
AoxI GGCC 5 cut(s) 33, 643, 659, 981, 1038
ApeKI GCWGC 7 cut(s) 23, 179, 198, 441, 612, 615, 920
ApoI RAATTY 1 cut(s) 396
ArsI GACNNNNNNTTYG 2 cut(s) 587, 619
AseI ATTAAT 1 cut(s) 192
AsiGI ACCGGT 1 cut(s) 67
AspLEI GCGC 5 cut(s) 81, 423, 432, 1067, 1081
AspS9I GGNCC 5 cut(s) 287, 659, 755, 794, 982
AsuC2I CCSGG 2 cut(s) 206, 658
AsuHPI GGTGA 1 cut(s) 1025
AvaII GGWCC 3 cut(s) 287, 755, 794
AxyI CCTNAGG 1 cut(s) 957
BanII GRGCYC 1 cut(s) 310
BarI GAAGNNNNNNTAC 2 cut(s) 359, 391
BbsI GAAGAC 2 cut(s) 681, 899
Bbv12I GWGCWC 1 cut(s) 310
BbvI GCAGC 7 cut(s) 35, 166, 210, 453, 599, 627, 907
BccI CCATC 6 cut(s) 91, 265, 685, 857, 1040, 1055
BceAI ACGGC 1 cut(s) 150
BcgI CGANNNNNNTGC 4 cut(s) 131, 165, 396, 430
BciT130I CCWGG 2 cut(s) 32, 164
BcnI CCSGG 2 cut(s) 206, 658
BcoDI GTCTC 1 cut(s) 91
BcuI ACTAGT 1 cut(s) 667
BfaI CTAG 5 cut(s) 44, 50, 668, 749, 1028
BfmI CTRYAG 1 cut(s) 613
BfuAI ACCTGC 1 cut(s) 961
BglI GCCNNNNNGGC 2 cut(s) 32, 438
BisI GCNGC 8 cut(s) 24, 180, 199, 442, 613, 616, 921, 1082
BlsI GCNGC 8 cut(s) 25, 181, 200, 443, 614, 617, 922, 1083
Bme1390I CCNGG 4 cut(s) 32, 164, 206, 658
Bme18I GGWCC 3 cut(s) 287, 755, 794
BmgT120I GGNCC 5 cut(s) 287, 659, 755, 794, 982
BmiI GGNNCC 4 cut(s) 756, 795, 796, 984
BmrFI CCNGG 4 cut(s) 32, 164, 206, 658
BmsI GCATC 4 cut(s) 4, 210, 894, 1006
BpiI GAAGAC 2 cut(s) 681, 899
BplI GAGNNNNNCTC 2 cut(s) 225, 257
BpuEI CTTGAG 1 cut(s) 443
BpuMI CCSGG 2 cut(s) 206, 658
Bsa29I ATCGAT 2 cut(s) 12, 468
BsaBI GATNNNNATC 1 cut(s) 267
BsaJI CCNNGG 4 cut(s) 87, 163, 290, 908
BsaWI WCCGGW 1 cut(s) 67
Bsc4I CCNNNNNNNGG 7 cut(s) 88, 89, 211, 656, 657, 803, 1047
Bse118I RCCGGY 2 cut(s) 67, 403
Bse1I ACTGG 3 cut(s) 383, 571, 1092
Bse21I CCTNAGG 1 cut(s) 957
Bse3DI GCAATG 1 cut(s) 24
Bse8I GATNNNNATC 1 cut(s) 267
BseBI CCWGG 2 cut(s) 32, 164
BseCI ATCGAT 2 cut(s) 12, 468
BseDI CCNNGG 4 cut(s) 87, 163, 290, 908
BseGI GGATG 4 cut(s) 83, 201, 358, 387
BseJI GATNNNNATC 1 cut(s) 267
BseLI CCNNNNNNNGG 7 cut(s) 88, 89, 211, 656, 657, 803, 1047
BseMI GCAATG 1 cut(s) 24
BseMII CTCAG 1 cut(s) 924
BseNI ACTGG 3 cut(s) 383, 571, 1092
BseRI GAGGAG 1 cut(s) 28
BseXI GCAGC 7 cut(s) 35, 166, 210, 453, 599, 627, 907
BsgI GTGCAG 1 cut(s) 602
Bsh1236I CGCG 1 cut(s) 1079
Bsh1285I CGRYCG 3 cut(s) 12, 472, 610
BshFI GGCC 5 cut(s) 35, 645, 661, 983, 1040
BshTI ACCGGT 1 cut(s) 67
BshVI ATCGAT 2 cut(s) 12, 468
BsiEI CGRYCG 3 cut(s) 12, 472, 610
BsiHKAI GWGCWC 1 cut(s) 310
BsiSI CCGG 6 cut(s) 68, 205, 404, 476, 657, 662
BslFI GGGAC 3 cut(s) 768, 807, 844
BslI CCNNNNNNNGG 7 cut(s) 88, 89, 211, 656, 657, 803, 1047
BsmAI GTCTC 1 cut(s) 91
BsmFI GGGAC 3 cut(s) 768, 807, 844
BsmI GAATGC 3 cut(s) 407, 479, 856
BsnI GGCC 5 cut(s) 35, 645, 661, 983, 1040
Bsp1286I GDGCHC 1 cut(s) 310
Bsp143I GATC 7 cut(s) 9, 73, 155, 268, 413, 469, 513
Bsp19I CCATGG 1 cut(s) 290
BspACI CCGC 6 cut(s) 28, 285, 347, 711, 722, 1082
BspANI GGCC 5 cut(s) 35, 645, 661, 983, 1040
BspCNI CTCAG 1 cut(s) 925
BspDI ATCGAT 2 cut(s) 12, 468
BspFNI CGCG 1 cut(s) 1079
BspHI TCATGA 2 cut(s) 114, 363
BspLI GGNNCC 4 cut(s) 756, 795, 796, 984
BspMAI CTGCAG 1 cut(s) 617
BspMI ACCTGC 1 cut(s) 961
BspPI GGATC 1 cut(s) 81
BspQI GCTCTTC 1 cut(s) 878
BsrDI GCAATG 1 cut(s) 24
BsrFI RCCGGY 2 cut(s) 67, 403
BsrI ACTGG 3 cut(s) 383, 571, 1092
BssAI RCCGGY 2 cut(s) 67, 403
BssECI CCNNGG 4 cut(s) 87, 163, 290, 908
BssMI GATC 7 cut(s) 9, 73, 155, 268, 413, 469, 513
BssT1I CCWWGG 2 cut(s) 87, 290
Bst2UI CCWGG 2 cut(s) 32, 164
Bst4CI ACNGT 3 cut(s) 335, 733, 835
Bst6I CTCTTC 2 cut(s) 782, 878
BstC8I GCNNGC 2 cut(s) 28, 125
BstDEI CTNAG 3 cut(s) 780, 933, 957
BstDSI CCRYGG 1 cut(s) 290
BstF5I GGATG 4 cut(s) 83, 201, 358, 387
BstFNI CGCG 1 cut(s) 1079
BstHHI GCGC 5 cut(s) 81, 423, 432, 1067, 1081
BstKTI GATC 7 cut(s) 12, 76, 158, 271, 416, 472, 516
BstMAI GTCTC 1 cut(s) 91
BstMBI GATC 7 cut(s) 9, 73, 155, 268, 413, 469, 513
BstMCI CGRYCG 3 cut(s) 12, 472, 610
BstNI CCWGG 2 cut(s) 32, 164
BstNSI RCATGY 1 cut(s) 172
BstSCI CCNGG 4 cut(s) 30, 162, 204, 656
BstSFI CTRYAG 1 cut(s) 613
BstUI CGCG 1 cut(s) 1079
BstV1I GCAGC 7 cut(s) 35, 166, 210, 453, 599, 627, 907
BstV2I GAAGAC 2 cut(s) 681, 899
BstX2I RGATCY 1 cut(s) 73
BstYI RGATCY 1 cut(s) 73
Bsu15I ATCGAT 2 cut(s) 12, 468
Bsu36I CCTNAGG 1 cut(s) 957
BsuRI GGCC 5 cut(s) 35, 645, 661, 983, 1040
BsuTUI ATCGAT 2 cut(s) 12, 468
BtgI CCRYGG 1 cut(s) 290
BtsCI GGATG 4 cut(s) 83, 201, 358, 387
BtsI GCAGTG 1 cut(s) 814
BtsIMutI CAGTG 2 cut(s) 814, 1085
BveI ACCTGC 1 cut(s) 961
Cac8I GCNNGC 2 cut(s) 28, 125
CciI TCATGA 2 cut(s) 114, 363
CfoI GCGC 5 cut(s) 81, 423, 432, 1067, 1081
Cfr10I RCCGGY 2 cut(s) 67, 403
Cfr13I GGNCC 5 cut(s) 287, 659, 755, 794, 982
ClaI ATCGAT 2 cut(s) 12, 468
CseI GACGC 1 cut(s) 394
Csp6I GTAC 3 cut(s) 356, 376, 942
CspAI ACCGGT 1 cut(s) 67
CviQI GTAC 3 cut(s) 356, 376, 942
DdeI CTNAG 3 cut(s) 780, 933, 957
DpnI GATC 7 cut(s) 11, 75, 157, 270, 415, 471, 515
DpnII GATC 7 cut(s) 9, 73, 155, 268, 413, 469, 513
DraI TTTAAA 1 cut(s) 991
EaeI YGGCCR 1 cut(s) 1038
Eam1104I CTCTTC 2 cut(s) 782, 878
EarI CTCTTC 2 cut(s) 782, 878
EciI GGCGGA 1 cut(s) 300
Ecl136II GAGCTC 1 cut(s) 308
Eco130I CCWWGG 2 cut(s) 87, 290
Eco24I GRGCYC 1 cut(s) 310
Eco47I GGWCC 3 cut(s) 287, 755, 794
Eco53kI GAGCTC 1 cut(s) 308
Eco57I CTGAAG 1 cut(s) 126
Eco81I CCTNAGG 1 cut(s) 957
EcoICRI GAGCTC 1 cut(s) 308
EcoO109I RGGNCCY 3 cut(s) 755, 794, 982
EcoRI GAATTC 1 cut(s) 396
EcoRII CCWGG 2 cut(s) 30, 162
EcoT14I CCWWGG 2 cut(s) 87, 290
EcoT38I GRGCYC 1 cut(s) 310
ErhI CCWWGG 2 cut(s) 87, 290
FaqI GGGAC 3 cut(s) 768, 807, 844
FauI CCCGC 3 cut(s) 35, 715, 718
FauNDI CATATG 1 cut(s) 826
Fnu4HI GCNGC 8 cut(s) 24, 180, 199, 442, 613, 616, 921, 1082
FokI GGATG 4 cut(s) 70, 188, 365, 394
FriOI GRGCYC 1 cut(s) 310
Fsp4HI GCNGC 8 cut(s) 24, 180, 199, 442, 613, 616, 921, 1082
FspBI CTAG 5 cut(s) 44, 50, 668, 749, 1028
GlaI GCGC 5 cut(s) 80, 422, 431, 1066, 1080
GluI GCNGC 8 cut(s) 24, 180, 199, 442, 613, 616, 921, 1082
HaeIII GGCC 5 cut(s) 35, 645, 661, 983, 1040
HapII CCGG 6 cut(s) 68, 205, 404, 476, 657, 662
HgaI GACGC 1 cut(s) 394
HhaI GCGC 5 cut(s) 81, 423, 432, 1067, 1081
Hin6I GCGC 5 cut(s) 79, 421, 430, 1065, 1079
HinP1I GCGC 5 cut(s) 79, 421, 430, 1065, 1079
HincII GTYRAC 1 cut(s) 814
HindII GTYRAC 1 cut(s) 814
HinfI GANTC 5 cut(s) 487, 492, 549, 869, 929
HpaII CCGG 6 cut(s) 68, 205, 404, 476, 657, 662
HphI GGTGA 1 cut(s) 1025
Hpy166II GTNNAC 2 cut(s) 736, 814
Hpy188I TCNGA 8 cut(s) 221, 262, 312, 413, 418, 590, 874, 934
Hpy188III TCNNGA 4 cut(s) 115, 277, 364, 484
Hpy8I GTNNAC 2 cut(s) 736, 814
Hpy99I CGWCG 2 cut(s) 546, 549
HpyAV CCTTC 2 cut(s) 256, 768
HpyCH4III ACNGT 3 cut(s) 335, 733, 835
HpyCH4V TGCA 5 cut(s) 17, 182, 583, 615, 854
HpyF3I CTNAG 3 cut(s) 780, 933, 957
HspAI GCGC 5 cut(s) 79, 421, 430, 1065, 1079
KflI GGGWCCC 1 cut(s) 794
Kzo9I GATC 7 cut(s) 9, 73, 155, 268, 413, 469, 513
LguI GCTCTTC 1 cut(s) 878
LmnI GCTCC 4 cut(s) 132, 313, 418, 659
Lsp1109I GCAGC 7 cut(s) 35, 166, 210, 453, 599, 627, 907
LweI GCATC 4 cut(s) 4, 210, 894, 1006
MaeI CTAG 5 cut(s) 44, 50, 668, 749, 1028
MaeIII GTNAC 1 cut(s) 631
MalI GATC 7 cut(s) 11, 75, 157, 270, 415, 471, 515
MboI GATC 7 cut(s) 9, 73, 155, 268, 413, 469, 513
MboII GAAGA 9 cut(s) 73, 236, 572, 686, 799, 859, 895, 904, 1055
MflI RGATCY 1 cut(s) 73
MhlI GDGCHC 1 cut(s) 310
MluCI AATT 2 cut(s) 396, 801
MlyI GAGTC 2 cut(s) 501, 938
MmeI TCCRAC 1 cut(s) 199
MseI TTAA 2 cut(s) 192, 990
MslI CAYNNNNRTG 1 cut(s) 206
MspI CCGG 6 cut(s) 68, 205, 404, 476, 657, 662
MspR9I CCNGG 4 cut(s) 32, 164, 206, 658
Mva1269I GAATGC 3 cut(s) 407, 479, 856
MvaI CCWGG 2 cut(s) 32, 164
MvnI CGCG 1 cut(s) 1079
NciI CCSGG 2 cut(s) 206, 658
NcoI CCATGG 1 cut(s) 290
NdeI CATATG 1 cut(s) 826
NdeII GATC 7 cut(s) 9, 73, 155, 268, 413, 469, 513
NlaIV GGNNCC 4 cut(s) 756, 795, 796, 984
NmeAIII GCCGAG 2 cut(s) 323, 933
NspI RCATGY 1 cut(s) 172
PagI TCATGA 2 cut(s) 114, 363
PaqCI CACCTGC 1 cut(s) 961
PciSI GCTCTTC 1 cut(s) 878
PcsI WCGNNNNNNNCGW 1 cut(s) 496
PctI GAATGC 3 cut(s) 407, 479, 856
PfeI GAWTC 3 cut(s) 487, 549, 869
PflFI GACNNNGTC 1 cut(s) 335
PinAI ACCGGT 1 cut(s) 67
PkrI GCNGC 8 cut(s) 25, 181, 200, 443, 614, 617, 922, 1083
Ple19I CGATCG 2 cut(s) 12, 472
PleI GAGTC 2 cut(s) 500, 937
PpsI GAGTC 2 cut(s) 500, 937
PpuMI RGGWCCY 2 cut(s) 755, 794
PshBI ATTAAT 1 cut(s) 192
Psp124BI GAGCTC 1 cut(s) 310
Psp5II RGGWCCY 2 cut(s) 755, 794
Psp6I CCWGG 2 cut(s) 30, 162
PspGI CCWGG 2 cut(s) 30, 162
PspN4I GGNNCC 4 cut(s) 756, 795, 796, 984
PspPI GGNCC 5 cut(s) 287, 659, 755, 794, 982
PspPPI RGGWCCY 2 cut(s) 755, 794
PstI CTGCAG 1 cut(s) 617
PsuI RGATCY 1 cut(s) 73
PsyI GACNNNGTC 1 cut(s) 335
PvuI CGATCG 2 cut(s) 12, 472
RsaI GTAC 3 cut(s) 357, 377, 943
RsaNI GTAC 3 cut(s) 356, 376, 942
RseI CAYNNNNRTG 1 cut(s) 206
SacI GAGCTC 1 cut(s) 310
SapI GCTCTTC 1 cut(s) 878
SaqAI TTAA 2 cut(s) 192, 990
SatI GCNGC 8 cut(s) 24, 180, 199, 442, 613, 616, 921, 1082
Sau3AI GATC 7 cut(s) 9, 73, 155, 268, 413, 469, 513
Sau96I GGNCC 5 cut(s) 287, 659, 755, 794, 982
SchI GAGTC 2 cut(s) 501, 938
ScrFI CCNGG 4 cut(s) 32, 164, 206, 658
SduI GDGCHC 1 cut(s) 310
SfaNI GCATC 4 cut(s) 4, 210, 894, 1006
SfcI CTRYAG 1 cut(s) 613
SinI GGWCC 3 cut(s) 287, 755, 794
SmiMI CAYNNNNRTG 1 cut(s) 206
SmlI CTYRAG 1 cut(s) 458
SmoI CTYRAG 1 cut(s) 458
SpeI ACTAGT 1 cut(s) 667
Sse9I AATT 2 cut(s) 396, 801
SsiI CCGC 6 cut(s) 28, 285, 347, 711, 722, 1082
SspMI CTAG 5 cut(s) 44, 50, 668, 749, 1028
SstI GAGCTC 1 cut(s) 310
StyD4I CCNGG 4 cut(s) 30, 162, 204, 656
StyI CCWWGG 2 cut(s) 87, 290
TaaI ACNGT 3 cut(s) 335, 733, 835
TaqI TCGA 7 cut(s) 12, 175, 468, 490, 516, 547, 771
TaqII GACCGA 1 cut(s) 596
TasI AATT 2 cut(s) 396, 801
TatI WGTACW 1 cut(s) 941
TauI GCSGC 1 cut(s) 1084
TfiI GAWTC 3 cut(s) 487, 549, 869
Tru1I TTAA 2 cut(s) 192, 990
Tru9I TTAA 2 cut(s) 192, 990
TscAI CASTG 2 cut(s) 814, 1092
TseI GCWGC 7 cut(s) 23, 179, 198, 441, 612, 615, 920
TspDTI ATGAA 4 cut(s) 103, 380, 565, 579
TspGWI ACGGA 1 cut(s) 530
TspRI CASTG 2 cut(s) 814, 1092
Tth111I GACNNNGTC 1 cut(s) 335
VpaK11BI GGWCC 3 cut(s) 287, 755, 794
VspI ATTAAT 1 cut(s) 192
XapI RAATTY 1 cut(s) 396
XceI RCATGY 1 cut(s) 172
XspI CTAG 5 cut(s) 44, 50, 668, 749, 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.