Rmu_sc0011831.1_g000006

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011831.1
OG0000308
Physical Location & Seq
Reverse (-)
30728 .. 31981
1254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011831.1_g000006.1.cds

Sequence Viewer

Length: 1254 bp
atggcaattgatgcaatggcagcccgcttggcctcctccctagcgctggctgatggcaagcaaccggtggatttgcgtccatcaaaaggattgagacaacctgaagcattcatggtaggaaagctactcacggcacgggaatattctcgtcgatctttccttggtctatttcgatcttcatggagaatcaatggcagattgaatgttgaagaactcggagaagatgatagggtcttgttcacttttacagacccttcggatgtgaatagggtttggaaaggaggaccatggggatataaccgggctcctatagccttagcaccgtacgacggtgtcagcccggcaagggagatcccactgaagaaatcatcatattggctgacactgcaaggagtgccaccggccttcagatccgaacggattatgcgactgattgggagtaccataggcgagttcatggaagttgatcgccccgcctttcggacgcgagttttgcgcattagggtcgagatcgattatgtcaaacctctcctgtttcgtcgacgtttcagggtggaagatgaagtccagttcatggtgcagtttcgatatgacaaattgtttggcaggtgtggcacctgcggcctagttaaccatgttggcctcccttgttcagggccgaatctggaagaagaccgtgacatacctgttggcacagtggagcaacccacggctttagctgtattacggggactggaaaaccctaatgtcaatagggtaacggtaaacaaccaaactctgattttcaaggctcaaatccctaatagtatacctgaagctatcctacctcaatctgtgctggccatgcgtcgacatcgaagacaagtgcagattagagaattgagtgaaccaagactcaatgaagatccaatcacaggacaacgccgtagtagggaacatgatgaggtaactatctctccaaaaaaattgcgtttaagtcttgctattggaaaaaaaaacttggatgcagtgactatgggattgttggagggacctccaaacaataatgatcaacctaagagaaagagaggacgtcctgttggaagtgtgaacaagctgccatatggaacagcaggaaaaggaagaaaaaaagatggagaacaagaaaagataaagagcaaaaagaccaacctgatgccgaggttgttagctgctgatgaacctgaaacaagcactaactctaaccctaaggggaaagagcaagtgcttgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

417

Amino Acids

46.96

Weight (kDa)

10.09

Isoelectric Point (pI)

46.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 597, 626
AatII GACGTC 1 cut(s) 1075
Acc16I TGCGCA 1 cut(s) 497
Acc36I ACCTGC 2 cut(s) 597, 626
AccB1I GGYRCC 1 cut(s) 614
AccB7I CCANNNNNTGG 1 cut(s) 574
AccI GTMKAC 3 cut(s) 541, 808, 850
AccII CGCG 1 cut(s) 487
AciI CCGC 3 cut(s) 25, 474, 621
AclWI GGATC 3 cut(s) 346, 405, 899
AcoI YGGCCR 1 cut(s) 840
AcuI CTGAAG 4 cut(s) 123, 380, 391, 834
AcyI GRCGYC 1 cut(s) 1072
AfaI GTAC 2 cut(s) 326, 442
AfeI AGCGCT 1 cut(s) 45
AfiI CCNNNNNNNGG 9 cut(s) 46, 86, 329, 346, 480, 574, 653, 914, 931
AgeI ACCGGT 1 cut(s) 64
AgsI TTSAA 3 cut(s) 202, 209, 787
AluBI AGCT 5 cut(s) 124, 719, 818, 1096, 1190
AluI AGCT 5 cut(s) 124, 719, 818, 1096, 1190
Alw26I GTCTC 1 cut(s) 88
AlwI GGATC 3 cut(s) 346, 405, 899
Aor51HI AGCGCT 1 cut(s) 45
AoxI GGCC 6 cut(s) 30, 402, 622, 640, 656, 840
ApeKI GCWGC 3 cut(s) 20, 1096, 1190
ArsI GACNNNNNNTTYG 4 cut(s) 475, 507, 584, 616
AsiGI ACCGGT 1 cut(s) 64
AspLEI GCGC 2 cut(s) 46, 498
AspS9I GGNCC 3 cut(s) 284, 656, 1031
AsuC2I CCSGG 2 cut(s) 302, 341
AvaII GGWCC 2 cut(s) 284, 1031
AxyI CCTNAGG 1 cut(s) 1227
BalI TGGCCA 1 cut(s) 842
BanI GGYRCC 1 cut(s) 614
BanII GRGCYC 1 cut(s) 307
BarI GAAGNNNNNNTAC 2 cut(s) 807, 839
BbsI GAAGAC 2 cut(s) 678, 865
BbvI GCAGC 3 cut(s) 32, 1083, 1177
BccI CCATC 3 cut(s) 47, 88, 1127
BceAI ACGGC 3 cut(s) 147, 726, 909
BcgI CGANNNNNNTGC 2 cut(s) 487, 521
BclI TGATCA 1 cut(s) 1048
BcnI CCSGG 2 cut(s) 302, 341
BcoDI GTCTC 1 cut(s) 88
BfaI CTAG 2 cut(s) 41, 626
BfmI CTRYAG 1 cut(s) 309
BfoI RGCGCY 1 cut(s) 47
BfuAI ACCTGC 2 cut(s) 597, 626
BglI GCCNNNNNGGC 1 cut(s) 29
BisI GCNGC 4 cut(s) 21, 622, 1097, 1191
BlsI GCNGC 4 cut(s) 22, 623, 1098, 1192
Bme1390I CCNGG 2 cut(s) 302, 341
Bme18I GGWCC 2 cut(s) 284, 1031
BmgT120I GGNCC 3 cut(s) 284, 656, 1031
BmiI GGNNCC 3 cut(s) 306, 616, 1032
BmrFI CCNGG 2 cut(s) 302, 341
BmsI GCATC 2 cut(s) 994, 1164
BpiI GAAGAC 2 cut(s) 678, 865
Bpu10I CCTNAGC 1 cut(s) 316
BpuMI CCSGG 2 cut(s) 302, 341
Bsa29I ATCGAT 1 cut(s) 513
BsaHI GRCGYC 1 cut(s) 1072
BsaJI CCNNGG 4 cut(s) 160, 287, 708, 1178
BsaWI WCCGGW 1 cut(s) 64
BsaXI ACNNNNNCTCC 2 cut(s) 940, 970
Bsc4I CCNNNNNNNGG 9 cut(s) 46, 86, 329, 346, 480, 574, 653, 914, 931
Bse118I RCCGGY 2 cut(s) 64, 400
Bse1I ACTGG 2 cut(s) 568, 738
Bse21I CCTNAGG 1 cut(s) 1227
Bse3DI GCAATG 1 cut(s) 21
BseCI ATCGAT 1 cut(s) 513
BseDI CCNNGG 4 cut(s) 160, 287, 708, 1178
BseGI GGATG 2 cut(s) 265, 1009
BseLI CCNNNNNNNGG 9 cut(s) 46, 86, 329, 346, 480, 574, 653, 914, 931
BseMI GCAATG 1 cut(s) 21
BseNI ACTGG 2 cut(s) 568, 738
BseRI GAGGAG 1 cut(s) 25
BseXI GCAGC 3 cut(s) 32, 1083, 1177
BsgI GTGCAG 2 cut(s) 599, 887
Bsh1236I CGCG 1 cut(s) 487
BshFI GGCC 6 cut(s) 32, 404, 624, 642, 658, 842
BshNI GGYRCC 1 cut(s) 614
BshTI ACCGGT 1 cut(s) 64
BshVI ATCGAT 1 cut(s) 513
BsiSI CCGG 4 cut(s) 65, 301, 341, 401
BsiWI CGTACG 1 cut(s) 324
BslFI GGGAC 2 cut(s) 744, 1044
BslI CCNNNNNNNGG 9 cut(s) 46, 86, 329, 346, 480, 574, 653, 914, 931
BsmAI GTCTC 1 cut(s) 88
BsmFI GGGAC 2 cut(s) 744, 1044
BsmI GAATGC 1 cut(s) 107
BsnI GGCC 6 cut(s) 32, 404, 624, 642, 658, 842
Bsp1286I GDGCHC 1 cut(s) 307
Bsp143I GATC 8 cut(s) 152, 173, 351, 410, 466, 510, 904, 1048
Bsp19I CCATGG 1 cut(s) 287
BspACI CCGC 3 cut(s) 25, 474, 621
BspANI GGCC 6 cut(s) 32, 404, 624, 642, 658, 842
BspDI ATCGAT 1 cut(s) 513
BspFNI CGCG 1 cut(s) 487
BspLI GGNNCC 3 cut(s) 306, 616, 1032
BspMI ACCTGC 2 cut(s) 597, 626
BspPI GGATC 3 cut(s) 346, 405, 899
BspT107I GGYRCC 1 cut(s) 614
BsrDI GCAATG 1 cut(s) 21
BsrFI RCCGGY 2 cut(s) 64, 400
BsrI ACTGG 2 cut(s) 568, 738
BssAI RCCGGY 2 cut(s) 64, 400
BssECI CCNNGG 4 cut(s) 160, 287, 708, 1178
BssMI GATC 8 cut(s) 152, 173, 351, 410, 466, 510, 904, 1048
BssNAI GTATAC 1 cut(s) 809
BssNI GRCGYC 1 cut(s) 1072
BssT1I CCWWGG 2 cut(s) 160, 287
Bst1107I GTATAC 1 cut(s) 809
Bst4CI ACNGT 5 cut(s) 324, 332, 677, 697, 763
BstACI GRCGYC 1 cut(s) 1072
BstAPI GCANNNNNTGC 2 cut(s) 11, 394
BstC8I GCNNGC 5 cut(s) 25, 48, 59, 840, 1248
BstDEI CTNAG 3 cut(s) 316, 1056, 1227
BstDSI CCRYGG 2 cut(s) 287, 708
BstENI CCTNNNNNAGG 1 cut(s) 651
BstF5I GGATG 2 cut(s) 265, 1009
BstFNI CGCG 1 cut(s) 487
BstH2I RGCGCY 1 cut(s) 47
BstHHI GCGC 2 cut(s) 46, 498
BstKTI GATC 8 cut(s) 155, 176, 354, 413, 469, 513, 907, 1051
BstMAI GTCTC 1 cut(s) 88
BstMBI GATC 8 cut(s) 152, 173, 351, 410, 466, 510, 904, 1048
BstSCI CCNGG 2 cut(s) 300, 339
BstSFI CTRYAG 1 cut(s) 309
BstUI CGCG 1 cut(s) 487
BstV1I GCAGC 3 cut(s) 32, 1083, 1177
BstV2I GAAGAC 2 cut(s) 678, 865
BstX2I RGATCY 3 cut(s) 351, 410, 904
BstYI RGATCY 3 cut(s) 351, 410, 904
BstZ17I GTATAC 1 cut(s) 809
Bsu15I ATCGAT 1 cut(s) 513
Bsu36I CCTNAGG 1 cut(s) 1227
BsuRI GGCC 6 cut(s) 32, 404, 624, 642, 658, 842
BsuTUI ATCGAT 1 cut(s) 513
BtgI CCRYGG 2 cut(s) 287, 708
BtsCI GGATG 2 cut(s) 265, 1009
BtsI GCAGTG 2 cut(s) 383, 1014
BtsIMutI CAGTG 4 cut(s) 356, 383, 702, 1014
BveI ACCTGC 2 cut(s) 597, 626
Cac8I GCNNGC 5 cut(s) 25, 48, 59, 840, 1248
CfoI GCGC 2 cut(s) 46, 498
Cfr10I RCCGGY 2 cut(s) 64, 400
Cfr13I GGNCC 3 cut(s) 284, 656, 1031
ClaI ATCGAT 1 cut(s) 513
CseI GACGC 3 cut(s) 65, 493, 836
Csp6I GTAC 2 cut(s) 325, 441
CspAI ACCGGT 1 cut(s) 64
CviAII CATG 8 cut(s) 112, 180, 288, 457, 574, 635, 844, 938
CviQI GTAC 2 cut(s) 325, 441
DdeI CTNAG 3 cut(s) 316, 1056, 1227
DpnI GATC 8 cut(s) 154, 175, 353, 412, 468, 512, 906, 1050
DpnII GATC 8 cut(s) 152, 173, 351, 410, 466, 510, 904, 1048
EaeI YGGCCR 1 cut(s) 840
Eco130I CCWWGG 2 cut(s) 160, 287
Eco24I GRGCYC 1 cut(s) 307
Eco47I GGWCC 2 cut(s) 284, 1031
Eco47III AGCGCT 1 cut(s) 45
Eco57I CTGAAG 4 cut(s) 123, 380, 391, 834
Eco81I CCTNAGG 1 cut(s) 1227
EcoNI CCTNNNNNAGG 1 cut(s) 651
EcoO109I RGGNCCY 1 cut(s) 1031
EcoT14I CCWWGG 2 cut(s) 160, 287
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 2 cut(s) 160, 287
FaeI CATG 8 cut(s) 115, 183, 291, 460, 577, 638, 847, 941
FaqI GGGAC 2 cut(s) 744, 1044
FatI CATG 8 cut(s) 111, 179, 287, 456, 573, 634, 843, 937
FauI CCCGC 2 cut(s) 32, 481
FauNDI CATATG 1 cut(s) 1102
FbaI TGATCA 1 cut(s) 1048
FblI GTMKAC 3 cut(s) 541, 808, 850
Fnu4HI GCNGC 4 cut(s) 21, 622, 1097, 1191
FokI GGATG 2 cut(s) 272, 1016
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 4 cut(s) 21, 622, 1097, 1191
FspBI CTAG 2 cut(s) 41, 626
FspI TGCGCA 1 cut(s) 497
GlaI GCGC 2 cut(s) 45, 497
GluI GCNGC 4 cut(s) 21, 622, 1097, 1191
HaeII RGCGCY 1 cut(s) 47
HaeIII GGCC 6 cut(s) 32, 404, 624, 642, 658, 842
HapII CCGG 4 cut(s) 65, 301, 341, 401
HgaI GACGC 3 cut(s) 65, 493, 836
HhaI GCGC 2 cut(s) 46, 498
Hin1I GRCGYC 1 cut(s) 1072
Hin1II CATG 8 cut(s) 115, 183, 291, 460, 577, 638, 847, 941
Hin6I GCGC 2 cut(s) 44, 496
HinP1I GCGC 2 cut(s) 44, 496
HincII GTYRAC 3 cut(s) 542, 631, 851
HindII GTYRAC 3 cut(s) 542, 631, 851
HinfI GANTC 3 cut(s) 186, 661, 894
HpaI GTTAAC 1 cut(s) 631
HpaII CCGG 4 cut(s) 65, 301, 341, 401
Hpy166II GTNNAC 8 cut(s) 240, 542, 631, 766, 809, 851, 887, 1090
Hpy188I TCNGA 6 cut(s) 218, 259, 410, 415, 483, 780
Hpy188III TCNNGA 2 cut(s) 508, 665
Hpy8I GTNNAC 8 cut(s) 240, 542, 631, 766, 809, 851, 887, 1090
Hpy99I CGWCG 5 cut(s) 153, 332, 543, 546, 852
HpyAV CCTTC 2 cut(s) 264, 415
HpyCH4III ACNGT 5 cut(s) 324, 332, 677, 697, 763
HpyCH4IV ACGT 2 cut(s) 544, 1072
HpyCH4V TGCA 5 cut(s) 14, 388, 580, 868, 1007
HpyF3I CTNAG 3 cut(s) 316, 1056, 1227
HpySE526I ACGT 2 cut(s) 544, 1072
Hsp92I GRCGYC 1 cut(s) 1072
Hsp92II CATG 8 cut(s) 115, 183, 291, 460, 577, 638, 847, 941
HspAI GCGC 2 cut(s) 44, 496
Ksp22I TGATCA 1 cut(s) 1048
KspAI GTTAAC 1 cut(s) 631
Kzo9I GATC 8 cut(s) 152, 173, 351, 410, 466, 510, 904, 1048
LmnI GCTCC 2 cut(s) 310, 700
Lsp1109I GCAGC 3 cut(s) 32, 1083, 1177
LweI GCATC 2 cut(s) 994, 1164
MaeI CTAG 2 cut(s) 41, 626
MaeII ACGT 2 cut(s) 544, 1072
MaeIII GTNAC 4 cut(s) 677, 757, 946, 1009
MalI GATC 8 cut(s) 154, 175, 353, 412, 468, 512, 906, 1050
MboI GATC 8 cut(s) 152, 173, 351, 410, 466, 510, 904, 1048
MfeI CAATTG 1 cut(s) 6
MflI RGATCY 3 cut(s) 351, 410, 904
MhlI GDGCHC 1 cut(s) 307
MlsI TGGCCA 1 cut(s) 842
MluCI AATT 4 cut(s) 6, 596, 878, 965
MluNI TGGCCA 1 cut(s) 842
MlyI GAGTC 1 cut(s) 888
MmeI TCCRAC 2 cut(s) 1005, 1060
Mox20I TGGCCA 1 cut(s) 842
MscI TGGCCA 1 cut(s) 842
MseI TTAA 3 cut(s) 630, 974, 1252
Msp20I TGGCCA 1 cut(s) 842
MspI CCGG 4 cut(s) 65, 301, 341, 401
MspR9I CCNGG 2 cut(s) 302, 341
MunI CAATTG 1 cut(s) 6
Mva1269I GAATGC 1 cut(s) 107
MvnI CGCG 1 cut(s) 487
NciI CCSGG 2 cut(s) 302, 341
NcoI CCATGG 1 cut(s) 287
NdeI CATATG 1 cut(s) 1102
NdeII GATC 8 cut(s) 152, 173, 351, 410, 466, 510, 904, 1048
NlaIII CATG 8 cut(s) 115, 183, 291, 460, 577, 638, 847, 941
NlaIV GGNNCC 3 cut(s) 306, 616, 1032
NmeAIII GCCGAG 1 cut(s) 1203
NmuCI GTSAC 2 cut(s) 677, 1009
NsbI TGCGCA 1 cut(s) 497
PaqCI CACCTGC 2 cut(s) 597, 626
PcsI WCGNNNNNNNCGW 1 cut(s) 424
PctI GAATGC 1 cut(s) 107
PfeI GAWTC 2 cut(s) 186, 661
Pfl23II CGTACG 1 cut(s) 324
PflFI GACNNNGTC 1 cut(s) 332
PflMI CCANNNNNTGG 1 cut(s) 574
PinAI ACCGGT 1 cut(s) 64
PkrI GCNGC 4 cut(s) 22, 623, 1098, 1192
PleI GAGTC 1 cut(s) 888
PpsI GAGTC 1 cut(s) 888
PpuMI RGGWCCY 1 cut(s) 1031
Psp5II RGGWCCY 1 cut(s) 1031
PspLI CGTACG 1 cut(s) 324
PspN4I GGNNCC 3 cut(s) 306, 616, 1032
PspPI GGNCC 3 cut(s) 284, 656, 1031
PspPPI RGGWCCY 1 cut(s) 1031
PsuI RGATCY 3 cut(s) 351, 410, 904
PsyI GACNNNGTC 1 cut(s) 332
RsaI GTAC 2 cut(s) 326, 442
RsaNI GTAC 2 cut(s) 325, 441
SalI GTCGAC 2 cut(s) 540, 849
SaqAI TTAA 3 cut(s) 630, 974, 1252
SatI GCNGC 4 cut(s) 21, 622, 1097, 1191
Sau3AI GATC 8 cut(s) 152, 173, 351, 410, 466, 510, 904, 1048
Sau96I GGNCC 3 cut(s) 284, 656, 1031
SchI GAGTC 1 cut(s) 888
ScrFI CCNGG 2 cut(s) 302, 341
SduI GDGCHC 1 cut(s) 307
SfaNI GCATC 2 cut(s) 994, 1164
SfcI CTRYAG 1 cut(s) 309
SgrDI CGTCGACG 1 cut(s) 540
SinI GGWCC 2 cut(s) 284, 1031
Sse9I AATT 4 cut(s) 6, 596, 878, 965
SsiI CCGC 3 cut(s) 25, 474, 621
SspI AATATT 1 cut(s) 143
SspMI CTAG 2 cut(s) 41, 626
StyD4I CCNGG 2 cut(s) 300, 339
StyI CCWWGG 2 cut(s) 160, 287
TaaI ACNGT 5 cut(s) 324, 332, 677, 697, 763
TaiI ACGT 2 cut(s) 547, 1075
TaqI TCGA 8 cut(s) 151, 172, 507, 513, 541, 586, 850, 856
TasI AATT 4 cut(s) 6, 596, 878, 965
TauI GCSGC 1 cut(s) 624
TfiI GAWTC 2 cut(s) 186, 661
Tru1I TTAA 3 cut(s) 630, 974, 1252
Tru9I TTAA 3 cut(s) 630, 974, 1252
TscAI CASTG 4 cut(s) 363, 390, 702, 1014
TseFI GTSAC 2 cut(s) 677, 1009
TseI GCWGC 3 cut(s) 20, 1096, 1190
Tsp45I GTSAC 2 cut(s) 677, 1009
TspDTI ATGAA 7 cut(s) 100, 168, 445, 562, 576, 915, 1212
TspGWI ACGGA 1 cut(s) 433
TspRI CASTG 4 cut(s) 363, 390, 702, 1014
Tth111I GACNNNGTC 1 cut(s) 332
Van91I CCANNNNNTGG 1 cut(s) 574
VpaK11BI GGWCC 2 cut(s) 284, 1031
XagI CCTNNNNNAGG 1 cut(s) 651
XmiI GTMKAC 3 cut(s) 541, 808, 850
XspI CTAG 2 cut(s) 41, 626
ZraI GACGTC 1 cut(s) 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.