Rmu_sc0000594.1_g000075

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000594.1
OG0000308
Physical Location & Seq
Forward (+)
288697 .. 290725
2029 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000594.1_g000075.1.cds

Sequence Viewer

Length: 999 bp
atggcaacgatcgacgcaatggcagcccgcctggcctcctccctagcccttgctgatgggaagaacccggtggatctgtgcccgtccaaggctacgcccctgactgcatggaggattaatggtaatctcagggtggaggaagttggagaagatgacagatacgacagtgtcatcccggcggtggaggtgcccctcaagaagtcatcatactggatgacgctgcaaggaataccacctgcattccgatcggagcgcatcatgcgcctcattggaagcacgctcggcgacttcaaggaaatcaatcgtccggcattcaggaatcggactatgcgcatccgagttgagatcgattacgtgaaacctctgttattccgccgttgtttctgggtcgaagacgaagtccagttcgtagtgcagttcaggtatgacaagatcttcggtcgctgcggcacatgtggactagttactcatgttggcctcccctgttccggaccgatgctagttgaagataatgatacaccggtaggggcagtagcgccacccacagccttgactgtcatgcgagaacaaacagtaccaaaccctaatgttaacagggtggtgatgaataaccaaaccctaattttcaaggctcaagtgccaaggagtatcccagaagctcttctccctccatcggtgatgaacatacgacgtcataagagacaggtacaaattcaggaactactcgaaccaagatgcgatgaacatccaattaccggaatgcgtaggattagagaaaatgatgaggtaacaatctctcctaaaaaactctgtttgagtctagctattggaaaaaagaatttggatgcagtgactatgggtttgctagagggaccttcaaatgccaatgacccaccaaaaagaaagaggggacacccaattggcagtgtcaataaactaccatatgggacagcaggaaaacgaaagaatgcaaagaaagatgagaatctgcccaaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

332

Amino Acids

37.14

Weight (kDa)

9.59

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 244
AatII GACGTC 1 cut(s) 694
Acc16I TGCGCA 1 cut(s) 332
Acc36I ACCTGC 1 cut(s) 244
AccB1I GGYRCC 1 cut(s) 187
AccIII TCCGGA 1 cut(s) 488
AciI CCGC 4 cut(s) 28, 179, 373, 447
AclWI GGATC 1 cut(s) 81
AcsI RAATTY 2 cut(s) 711, 838
AcyI GRCGYC 1 cut(s) 691
AfaI GTAC 2 cut(s) 576, 708
AfiI CCNNNNNNNGG 5 cut(s) 88, 181, 488, 673, 755
AflIII ACRYGT 1 cut(s) 452
AgeI ACCGGT 1 cut(s) 520
AgsI TTSAA 4 cut(s) 292, 506, 628, 879
AhlI ACTAGT 1 cut(s) 460
AjnI CCWGG 1 cut(s) 30
AluBI AGCT 2 cut(s) 659, 824
AluI AGCT 2 cut(s) 659, 824
Alw26I GTCTC 1 cut(s) 694
AlwI GGATC 1 cut(s) 81
Aor13HI TCCGGA 1 cut(s) 488
AoxI GGCC 2 cut(s) 33, 475
ApeKI GCWGC 3 cut(s) 23, 220, 444
ApoI RAATTY 2 cut(s) 711, 838
ArsI GACNNNNNNTTYG 6 cut(s) 384, 416, 419, 451, 844, 876
AseI ATTAAT 1 cut(s) 117
AsiGI ACCGGT 1 cut(s) 520
Asp700I GAANNNNTTC 1 cut(s) 660
AspLEI GCGC 4 cut(s) 255, 264, 333, 538
AspS9I GGNCC 2 cut(s) 491, 872
AsuC2I CCSGG 2 cut(s) 68, 176
AsuHPI GGTGA 2 cut(s) 613, 688
AvaII GGWCC 2 cut(s) 491, 872
BaeGI GKGCMC 2 cut(s) 83, 192
BaeI ACNNNNGTAYC 4 cut(s) 151, 184, 507, 540
BanI GGYRCC 1 cut(s) 187
BarI GAAGNNNNNNTAC 2 cut(s) 191, 223
BbsI GAAGAC 1 cut(s) 399
BbvI GCAGC 3 cut(s) 35, 207, 431
BccI CCATC 2 cut(s) 50, 679
BceAI ACGGC 1 cut(s) 360
BcgI CGANNNNNNTGC 2 cut(s) 228, 262
BciT130I CCWGG 1 cut(s) 32
BciVI GTATCC 1 cut(s) 659
BcnI CCSGG 2 cut(s) 68, 176
BcoDI GTCTC 1 cut(s) 694
BcuI ACTAGT 1 cut(s) 460
BfaI CTAG 5 cut(s) 44, 461, 500, 821, 866
BfoI RGCGCY 1 cut(s) 539
BfuAI ACCTGC 1 cut(s) 244
BfuI GTATCC 1 cut(s) 659
BglI GCCNNNNNGGC 1 cut(s) 32
BglII AGATCT 1 cut(s) 432
BisI GCNGC 4 cut(s) 24, 221, 445, 448
BlsI GCNGC 4 cut(s) 25, 222, 446, 449
Bme1390I CCNGG 3 cut(s) 32, 68, 176
Bme18I GGWCC 2 cut(s) 491, 872
BmgT120I GGNCC 2 cut(s) 491, 872
BmiI GGNNCC 2 cut(s) 189, 873
BmrFI CCNGG 3 cut(s) 32, 68, 176
BmsI GCATC 5 cut(s) 264, 342, 486, 725, 835
BpiI GAAGAC 1 cut(s) 399
BpuEI CTTGAG 2 cut(s) 179, 618
BpuMI CCSGG 2 cut(s) 68, 176
Bsa29I ATCGAT 1 cut(s) 348
BsaAI YACGTR 1 cut(s) 355
BsaBI GATNNNNATC 2 cut(s) 744, 984
BsaHI GRCGYC 1 cut(s) 691
BsaJI CCNNGG 2 cut(s) 87, 641
BsaWI WCCGGW 3 cut(s) 488, 520, 755
BsaXI ACNNNNNCTCC 2 cut(s) 781, 811
Bsc4I CCNNNNNNNGG 5 cut(s) 88, 181, 488, 673, 755
Bse118I RCCGGY 1 cut(s) 520
Bse1I ACTGG 2 cut(s) 215, 403
Bse3DI GCAATG 1 cut(s) 24
Bse8I GATNNNNATC 2 cut(s) 744, 984
BseAI TCCGGA 1 cut(s) 488
BseBI CCWGG 1 cut(s) 32
BseCI ATCGAT 1 cut(s) 348
BseDI CCNNGG 2 cut(s) 87, 641
BseGI GGATG 5 cut(s) 171, 219, 333, 745, 850
BseJI GATNNNNATC 2 cut(s) 744, 984
BseLI CCNNNNNNNGG 5 cut(s) 88, 181, 488, 673, 755
BseMI GCAATG 1 cut(s) 24
BseMII CTCAG 1 cut(s) 142
BseNI ACTGG 2 cut(s) 215, 403
BseRI GAGGAG 1 cut(s) 28
BseSI GKGCMC 2 cut(s) 83, 192
BseXI GCAGC 3 cut(s) 35, 207, 431
BsgI GTGCAG 1 cut(s) 434
Bsh1285I CGRYCG 3 cut(s) 12, 248, 442
BshFI GGCC 2 cut(s) 35, 477
BshNI GGYRCC 1 cut(s) 187
BshTI ACCGGT 1 cut(s) 520
BshVI ATCGAT 1 cut(s) 348
BsiEI CGRYCG 3 cut(s) 12, 248, 442
BsiSI CCGG 6 cut(s) 68, 176, 308, 489, 521, 756
BslFI GGGAC 3 cut(s) 885, 924, 961
BslI CCNNNNNNNGG 5 cut(s) 88, 181, 488, 673, 755
BsmAI GTCTC 1 cut(s) 694
BsmFI GGGAC 3 cut(s) 885, 924, 961
BsmI GAATGC 4 cut(s) 239, 311, 765, 973
BsnI GGCC 2 cut(s) 35, 477
Bsp1286I GDGCHC 2 cut(s) 83, 192
Bsp13I TCCGGA 1 cut(s) 488
Bsp143I GATC 5 cut(s) 9, 73, 245, 345, 432
BspACI CCGC 4 cut(s) 28, 179, 373, 447
BspANI GGCC 2 cut(s) 35, 477
BspCNI CTCAG 1 cut(s) 141
BspDI ATCGAT 1 cut(s) 348
BspEI TCCGGA 1 cut(s) 488
BspLI GGNNCC 2 cut(s) 189, 873
BspMI ACCTGC 1 cut(s) 244
BspPI GGATC 1 cut(s) 81
BspQI GCTCTTC 1 cut(s) 666
BspT107I GGYRCC 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 24
BsrFI RCCGGY 1 cut(s) 520
BsrI ACTGG 2 cut(s) 215, 403
BssAI RCCGGY 1 cut(s) 520
BssECI CCNNGG 2 cut(s) 87, 641
BssMI GATC 5 cut(s) 9, 73, 245, 345, 432
BssNI GRCGYC 1 cut(s) 691
BssT1I CCWWGG 2 cut(s) 87, 641
Bst2UI CCWGG 1 cut(s) 32
Bst4CI ACNGT 3 cut(s) 167, 556, 574
Bst6I CTCTTC 1 cut(s) 666
BstACI GRCGYC 1 cut(s) 691
BstBAI YACGTR 1 cut(s) 355
BstC8I GCNNGC 2 cut(s) 28, 278
BstDEI CTNAG 1 cut(s) 128
BstF5I GGATG 5 cut(s) 171, 219, 333, 745, 850
BstH2I RGCGCY 1 cut(s) 539
BstHHI GCGC 4 cut(s) 255, 264, 333, 538
BstKTI GATC 5 cut(s) 12, 76, 248, 348, 435
BstMAI GTCTC 1 cut(s) 694
BstMBI GATC 5 cut(s) 9, 73, 245, 345, 432
BstMCI CGRYCG 3 cut(s) 12, 248, 442
BstMWI GCNNNNNNNGC 5 cut(s) 23, 32, 259, 261, 282
BstNI CCWGG 1 cut(s) 32
BstNSI RCATGY 1 cut(s) 456
BstSCI CCNGG 3 cut(s) 30, 66, 174
BstSLI GKGCMC 2 cut(s) 83, 192
BstV1I GCAGC 3 cut(s) 35, 207, 431
BstV2I GAAGAC 1 cut(s) 399
BstX2I RGATCY 2 cut(s) 73, 432
BstYI RGATCY 2 cut(s) 73, 432
Bsu15I ATCGAT 1 cut(s) 348
BsuI GTATCC 1 cut(s) 659
BsuRI GGCC 2 cut(s) 35, 477
BsuTUI ATCGAT 1 cut(s) 348
BtgZI GCGATG 1 cut(s) 753
BtsCI GGATG 5 cut(s) 171, 219, 333, 745, 850
BtsI GCAGTG 2 cut(s) 855, 931
BtsIMutI CAGTG 3 cut(s) 172, 855, 931
BveI ACCTGC 1 cut(s) 244
Cac8I GCNNGC 2 cut(s) 28, 278
CfoI GCGC 4 cut(s) 255, 264, 333, 538
Cfr10I RCCGGY 1 cut(s) 520
Cfr13I GGNCC 2 cut(s) 491, 872
ClaI ATCGAT 1 cut(s) 348
CpoI CGGWCCG 1 cut(s) 491
CseI GACGC 2 cut(s) 23, 226
Csp6I GTAC 2 cut(s) 575, 707
CspAI ACCGGT 1 cut(s) 520
CspI CGGWCCG 1 cut(s) 491
CviAII CATG 5 cut(s) 108, 259, 453, 470, 559
CviJI RGCY 9 cut(s) 26, 35, 47, 92, 477, 548, 632, 659, 824
CviKI_1 RGCY 9 cut(s) 26, 35, 47, 92, 477, 548, 632, 659, 824
CviQI GTAC 2 cut(s) 575, 707
DdeI CTNAG 1 cut(s) 128
DpnI GATC 5 cut(s) 11, 75, 247, 347, 434
DpnII GATC 5 cut(s) 9, 73, 245, 345, 432
Eam1104I CTCTTC 1 cut(s) 666
EarI CTCTTC 1 cut(s) 666
EciI GGCGGA 1 cut(s) 362
Eco130I CCWWGG 2 cut(s) 87, 641
Eco47I GGWCC 2 cut(s) 491, 872
EcoO109I RGGNCCY 1 cut(s) 872
EcoRII CCWGG 1 cut(s) 30
EcoT14I CCWWGG 2 cut(s) 87, 641
ErhI CCWWGG 2 cut(s) 87, 641
FaeI CATG 5 cut(s) 111, 262, 456, 473, 562
FaqI GGGAC 3 cut(s) 885, 924, 961
FatI CATG 5 cut(s) 107, 258, 452, 469, 558
FauI CCCGC 1 cut(s) 35
FauNDI CATATG 1 cut(s) 943
Fnu4HI GCNGC 4 cut(s) 24, 221, 445, 448
FokI GGATG 5 cut(s) 158, 226, 320, 732, 857
Fsp4HI GCNGC 4 cut(s) 24, 221, 445, 448
FspAI RTGCGCAY 1 cut(s) 332
FspBI CTAG 5 cut(s) 44, 461, 500, 821, 866
FspI TGCGCA 1 cut(s) 332
GlaI GCGC 4 cut(s) 254, 263, 332, 537
GluI GCNGC 4 cut(s) 24, 221, 445, 448
HaeII RGCGCY 1 cut(s) 539
HaeIII GGCC 2 cut(s) 35, 477
HapII CCGG 6 cut(s) 68, 176, 308, 489, 521, 756
HgaI GACGC 2 cut(s) 23, 226
HhaI GCGC 4 cut(s) 255, 264, 333, 538
Hin1I GRCGYC 1 cut(s) 691
Hin1II CATG 5 cut(s) 111, 262, 456, 473, 562
Hin6I GCGC 4 cut(s) 253, 262, 331, 536
HinP1I GCGC 4 cut(s) 253, 262, 331, 536
HincII GTYRAC 1 cut(s) 592
HindII GTYRAC 1 cut(s) 592
HinfI GANTC 3 cut(s) 319, 817, 985
HpaI GTTAAC 1 cut(s) 592
HpaII CCGG 6 cut(s) 68, 176, 308, 489, 521, 756
HphI GGTGA 2 cut(s) 613, 688
Hpy166II GTNNAC 2 cut(s) 458, 592
Hpy188I TCNGA 4 cut(s) 245, 250, 324, 338
Hpy188III TCNNGA 4 cut(s) 196, 316, 489, 716
Hpy8I GTNNAC 2 cut(s) 458, 592
Hpy99I CGWCG 2 cut(s) 17, 693
HpyAV CCTTC 1 cut(s) 885
HpyCH4III ACNGT 3 cut(s) 167, 556, 574
HpyCH4IV ACGT 2 cut(s) 354, 691
HpyCH4V TGCA 6 cut(s) 107, 223, 239, 415, 848, 971
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 32, 259, 261, 282
HpyF3I CTNAG 1 cut(s) 128
HpySE526I ACGT 2 cut(s) 354, 691
Hsp92I GRCGYC 1 cut(s) 691
Hsp92II CATG 5 cut(s) 111, 262, 456, 473, 562
HspAI GCGC 4 cut(s) 253, 262, 331, 536
Kpn2I TCCGGA 1 cut(s) 488
KspAI GTTAAC 1 cut(s) 592
Kzo9I GATC 5 cut(s) 9, 73, 245, 345, 432
LguI GCTCTTC 1 cut(s) 666
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 3 cut(s) 35, 207, 431
LweI GCATC 5 cut(s) 264, 342, 486, 725, 835
MaeI CTAG 5 cut(s) 44, 461, 500, 821, 866
MaeII ACGT 2 cut(s) 354, 691
MaeIII GTNAC 3 cut(s) 463, 787, 850
MalI GATC 5 cut(s) 11, 75, 247, 347, 434
MboI GATC 5 cut(s) 9, 73, 245, 345, 432
MboII GAAGA 6 cut(s) 73, 161, 404, 427, 518, 653
MfeI CAATTG 1 cut(s) 918
MflI RGATCY 2 cut(s) 73, 432
MhlI GDGCHC 2 cut(s) 83, 192
MluCI AATT 5 cut(s) 621, 711, 750, 838, 918
MlyI GAGTC 1 cut(s) 826
MmeI TCCRAC 1 cut(s) 124
MroI TCCGGA 1 cut(s) 488
MroXI GAANNNNTTC 1 cut(s) 660
MseI TTAA 2 cut(s) 117, 591
MspI CCGG 6 cut(s) 68, 176, 308, 489, 521, 756
MspR9I CCNGG 3 cut(s) 32, 68, 176
MunI CAATTG 1 cut(s) 918
Mva1269I GAATGC 4 cut(s) 239, 311, 765, 973
MvaI CCWGG 1 cut(s) 32
MwoI GCNNNNNNNGC 5 cut(s) 23, 32, 259, 261, 282
NciI CCSGG 2 cut(s) 68, 176
NdeI CATATG 1 cut(s) 943
NdeII GATC 5 cut(s) 9, 73, 245, 345, 432
NlaIII CATG 5 cut(s) 111, 262, 456, 473, 562
NlaIV GGNNCC 2 cut(s) 189, 873
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 1 cut(s) 850
NsbI TGCGCA 1 cut(s) 332
NspI RCATGY 1 cut(s) 456
PaqCI CACCTGC 1 cut(s) 244
PciI ACATGT 1 cut(s) 452
PciSI GCTCTTC 1 cut(s) 666
PctI GAATGC 4 cut(s) 239, 311, 765, 973
PdmI GAANNNNTTC 1 cut(s) 660
PfeI GAWTC 2 cut(s) 319, 985
PflFI GACNNNGTC 2 cut(s) 167, 398
PinAI ACCGGT 1 cut(s) 520
PkrI GCNGC 4 cut(s) 25, 222, 446, 449
Ple19I CGATCG 2 cut(s) 12, 248
PleI GAGTC 1 cut(s) 825
PpsI GAGTC 1 cut(s) 825
Ppu21I YACGTR 1 cut(s) 355
PpuMI RGGWCCY 1 cut(s) 872
PscI ACATGT 1 cut(s) 452
PshBI ATTAAT 1 cut(s) 117
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 1 cut(s) 30
PspGI CCWGG 1 cut(s) 30
PspN4I GGNNCC 2 cut(s) 189, 873
PspPI GGNCC 2 cut(s) 491, 872
PspPPI RGGWCCY 1 cut(s) 872
PsrI GAACNNNNNNTAC 2 cut(s) 558, 590
PsuI RGATCY 2 cut(s) 73, 432
PsyI GACNNNGTC 2 cut(s) 167, 398
PvuI CGATCG 2 cut(s) 12, 248
RsaI GTAC 2 cut(s) 576, 708
RsaNI GTAC 2 cut(s) 575, 707
Rsr2I CGGWCCG 1 cut(s) 491
RsrII CGGWCCG 1 cut(s) 491
SapI GCTCTTC 1 cut(s) 666
SaqAI TTAA 2 cut(s) 117, 591
SatI GCNGC 4 cut(s) 24, 221, 445, 448
Sau3AI GATC 5 cut(s) 9, 73, 245, 345, 432
Sau96I GGNCC 2 cut(s) 491, 872
SchI GAGTC 1 cut(s) 826
ScrFI CCNGG 3 cut(s) 32, 68, 176
SduI GDGCHC 2 cut(s) 83, 192
SfaNI GCATC 5 cut(s) 264, 342, 486, 725, 835
SinI GGWCC 2 cut(s) 491, 872
SmlI CTYRAG 2 cut(s) 194, 633
SmoI CTYRAG 2 cut(s) 194, 633
SpeI ACTAGT 1 cut(s) 460
Sse9I AATT 5 cut(s) 621, 711, 750, 838, 918
SsiI CCGC 4 cut(s) 28, 179, 373, 447
SspMI CTAG 5 cut(s) 44, 461, 500, 821, 866
StyD4I CCNGG 3 cut(s) 30, 66, 174
StyI CCWWGG 2 cut(s) 87, 641
TaaI ACNGT 3 cut(s) 167, 556, 574
TaiI ACGT 2 cut(s) 357, 694
TaqI TCGA 4 cut(s) 12, 348, 390, 726
TaqII GACCGA 2 cut(s) 428, 508
TasI AATT 5 cut(s) 621, 711, 750, 838, 918
TauI GCSGC 1 cut(s) 450
TfiI GAWTC 2 cut(s) 319, 985
Tru1I TTAA 2 cut(s) 117, 591
Tru9I TTAA 2 cut(s) 117, 591
TscAI CASTG 3 cut(s) 172, 855, 931
TseFI GTSAC 1 cut(s) 850
TseI GCWGC 3 cut(s) 23, 220, 444
Tsp45I GTSAC 1 cut(s) 850
TspDTI ATGAA 3 cut(s) 620, 695, 756
TspRI CASTG 3 cut(s) 172, 855, 931
Tth111I GACNNNGTC 2 cut(s) 167, 398
VpaK11BI GGWCC 2 cut(s) 491, 872
VspI ATTAAT 1 cut(s) 117
XapI RAATTY 2 cut(s) 711, 838
XceI RCATGY 1 cut(s) 456
XmnI GAANNNNTTC 1 cut(s) 660
XspI CTAG 5 cut(s) 44, 461, 500, 821, 866
ZraI GACGTC 1 cut(s) 692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.