Rmu_sc0003973.1_g000010

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003973.1
OG0000308
Physical Location & Seq
Reverse (-)
34963 .. 36039
1077 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003973.1_g000010.1.cds

Sequence Viewer

Length: 1077 bp
atgtttcgatctgcatggcatgttggtggagatcttcgggtggagccggcagcaggggatcgagttcttttctcattctcggatctggtggatcgcgctcgtgtgtggcgtggtggcccatgggttttcaaccgagcccttgtagcactggcagaatatgatgggatcaaaccagtcgaacaagtgctgctgcaatgttcttcctattgggttacactattggatgtgccgccagcgttccgatccgaaagggtgatgcgcatgattggcagcactataggtgatctgaagaagtgggacagaccagctttccggggaggtgtactgcgggtcagggtggagatcgagttttcacagcctatacttactcaatgtctctttcggttggaggatcgagtggaggtgctggtgaggttccgttttgacaaactatttggcaggtgcaatagctgtgggtttgtaacccatgtgggattaccatgttctggaccagtgttggaagatggggttggaaatgacaggccttatccggtggagcagcgtagcggtgctgctgaaacaactttggcagttagagcatcggaggctagggcaaaccctagtggacctactttcgtcttcaaggcacaagtcctccctgggatagctgaaaccttggcgtctatgtcgacaggctctttccttcctcagaagactcaacgtcaagtcaccatccgagaaattgaagaaaacagtgagcatgcatctccaattacggggaagaggaggaaaagaacaggtgatgtgtcggtgtctccgaagaagccaaggctgagtatggcaattggtaagcacaatgttaatgctgccactatgggtttaattgcacctgctatgagtaagccaaataagaagaagcgtggtcgacctactggtagtcttaacaagaggccatatggtactgctggtaagggaaagcaaaactctgacccaagtagtgagaagaagaagggtgccaaggcccgaaagaacttaaatggggacttggaaaatgctagcgactccaaccctaaatggaaggagttggttctacgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

358

Amino Acids

39.54

Weight (kDa)

10.14

Isoelectric Point (pI)

44.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 429, 877
Acc16I TGCGCA 1 cut(s) 260
Acc36I ACCTGC 2 cut(s) 429, 877
AccB1I GGYRCC 1 cut(s) 992
AccB7I CCANNNNNTGG 1 cut(s) 485
AccI GTMKAC 2 cut(s) 668, 904
AccII CGCG 1 cut(s) 96
AciI CCGC 3 cut(s) 230, 328, 546
AclWI GGATC 6 cut(s) 66, 90, 99, 173, 237, 399
AcuI CTGAAG 1 cut(s) 308
AcyI GRCGYC 1 cut(s) 659
AfaI GTAC 2 cut(s) 324, 940
AfiI CCNNNNNNNGG 3 cut(s) 53, 485, 755
AgsI TTSAA 3 cut(s) 130, 622, 725
AhdI GACNNNNNGTC 1 cut(s) 699
AjnI CCWGG 1 cut(s) 637
AjuI GAANNNNNNNTTGG 2 cut(s) 492, 524
AluBI AGCT 3 cut(s) 308, 450, 647
AluI AGCT 3 cut(s) 308, 450, 647
Alw26I GTCTC 2 cut(s) 380, 798
AlwI GGATC 6 cut(s) 66, 90, 99, 173, 237, 399
AoxI GGCC 4 cut(s) 115, 521, 929, 999
ApeKI GCWGC 7 cut(s) 50, 187, 190, 270, 538, 551, 845
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
AspLEI GCGC 2 cut(s) 98, 261
AspS9I GGNCC 4 cut(s) 116, 488, 605, 1000
AsuC2I CCSGG 1 cut(s) 314
AsuHPI GGTGA 5 cut(s) 265, 293, 421, 700, 791
AsuNHI GCTAGC 1 cut(s) 1034
AvaII GGWCC 2 cut(s) 488, 605
BanI GGYRCC 1 cut(s) 992
BanII GRGCYC 1 cut(s) 139
BauI CACGAG 1 cut(s) 99
BbsI GAAGAC 2 cut(s) 610, 698
BbvI GCAGC 7 cut(s) 62, 174, 177, 282, 538, 550, 832
BccI CCATC 3 cut(s) 155, 497, 719
BciT130I CCWGG 1 cut(s) 639
BcnI CCSGG 1 cut(s) 314
BcoDI GTCTC 2 cut(s) 380, 798
BfaI CTAG 3 cut(s) 588, 600, 1035
BfmI CTRYAG 1 cut(s) 276
BfuAI ACCTGC 2 cut(s) 429, 877
BglII AGATCT 1 cut(s) 31
BisI GCNGC 8 cut(s) 51, 188, 191, 230, 271, 539, 552, 846
BlsI GCNGC 8 cut(s) 52, 189, 192, 231, 272, 540, 553, 847
Bme1390I CCNGG 2 cut(s) 314, 639
Bme18I GGWCC 2 cut(s) 488, 605
BmeRI GACNNNNNGTC 1 cut(s) 699
BmgT120I GGNCC 4 cut(s) 116, 488, 605, 1000
BmiI GGNNCC 3 cut(s) 45, 416, 994
BmrFI CCNGG 2 cut(s) 314, 639
BmsI GCATC 3 cut(s) 246, 587, 752
BmtI GCTAGC 1 cut(s) 1038
BpiI GAAGAC 2 cut(s) 610, 698
BpuMI CCSGG 1 cut(s) 314
BsaHI GRCGYC 1 cut(s) 659
BsaJI CCNNGG 7 cut(s) 119, 313, 637, 638, 654, 806, 996
BsaWI WCCGGW 1 cut(s) 529
BsaXI ACNNNNNCTCC 4 cut(s) 332, 362, 618, 648
Bsc4I CCNNNNNNNGG 3 cut(s) 53, 485, 755
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 4 cut(s) 153, 173, 491, 916
Bse3DI GCAATG 1 cut(s) 200
BseBI CCWGG 1 cut(s) 639
BseDI CCNNGG 7 cut(s) 119, 313, 637, 638, 654, 806, 996
BseGI GGATG 2 cut(s) 229, 711
BseLI CCNNNNNNNGG 3 cut(s) 53, 485, 755
BseMI GCAATG 1 cut(s) 200
BseMII CTCAG 2 cut(s) 701, 803
BseNI ACTGG 4 cut(s) 153, 173, 491, 916
BseRI GAGGAG 1 cut(s) 778
BseXI GCAGC 7 cut(s) 62, 174, 177, 282, 538, 550, 832
Bsh1236I CGCG 1 cut(s) 96
BshFI GGCC 4 cut(s) 117, 523, 931, 1001
BshNI GGYRCC 1 cut(s) 992
BsiSI CCGG 3 cut(s) 47, 313, 530
BslFI GGGAC 2 cut(s) 311, 1034
BslI CCNNNNNNNGG 3 cut(s) 53, 485, 755
BsmAI GTCTC 2 cut(s) 380, 798
BsmFI GGGAC 2 cut(s) 311, 1034
BsnI GGCC 4 cut(s) 117, 523, 931, 1001
Bsp1286I GDGCHC 1 cut(s) 139
Bsp19I CCATGG 1 cut(s) 119
BspACI CCGC 3 cut(s) 230, 328, 546
BspANI GGCC 4 cut(s) 117, 523, 931, 1001
BspCNI CTCAG 2 cut(s) 700, 804
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 3 cut(s) 45, 416, 994
BspMI ACCTGC 2 cut(s) 429, 877
BspOI GCTAGC 1 cut(s) 1038
BspPI GGATC 6 cut(s) 66, 90, 99, 173, 237, 399
BspT107I GGYRCC 1 cut(s) 992
BsrDI GCAATG 1 cut(s) 200
BsrFI RCCGGY 1 cut(s) 46
BsrI ACTGG 4 cut(s) 153, 173, 491, 916
BssAI RCCGGY 1 cut(s) 46
BssECI CCNNGG 7 cut(s) 119, 313, 637, 638, 654, 806, 996
BssNI GRCGYC 1 cut(s) 659
BssSI CACGAG 1 cut(s) 99
BssT1I CCWWGG 4 cut(s) 119, 654, 806, 996
Bst2BI CACGAG 1 cut(s) 99
Bst2UI CCWGG 1 cut(s) 639
Bst4CI ACNGT 1 cut(s) 734
Bst6I CTCTTC 1 cut(s) 755
BstACI GRCGYC 1 cut(s) 659
BstC8I GCNNGC 4 cut(s) 48, 234, 741, 1036
BstDEI CTNAG 2 cut(s) 687, 812
BstDSI CCRYGG 1 cut(s) 119
BstF5I GGATG 2 cut(s) 229, 711
BstFNI CGCG 1 cut(s) 96
BstHHI GCGC 2 cut(s) 98, 261
BstMAI GTCTC 2 cut(s) 380, 798
BstMWI GCNNNNNNNGC 4 cut(s) 143, 267, 575, 584
BstNI CCWGG 1 cut(s) 639
BstNSI RCATGY 2 cut(s) 23, 743
BstSCI CCNGG 2 cut(s) 312, 637
BstSFI CTRYAG 1 cut(s) 276
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 7 cut(s) 62, 174, 177, 282, 538, 550, 832
BstV2I GAAGAC 2 cut(s) 610, 698
BstX2I RGATCY 2 cut(s) 31, 82
BstYI RGATCY 2 cut(s) 31, 82
BsuRI GGCC 4 cut(s) 117, 523, 931, 1001
BtgI CCRYGG 1 cut(s) 119
BtsCI GGATG 2 cut(s) 229, 711
BtsIMutI CAGTG 3 cut(s) 146, 498, 739
BveI ACCTGC 2 cut(s) 429, 877
Cac8I GCNNGC 4 cut(s) 48, 234, 741, 1036
CfoI GCGC 2 cut(s) 98, 261
Cfr10I RCCGGY 1 cut(s) 46
Cfr13I GGNCC 4 cut(s) 116, 488, 605, 1000
CseI GACGC 1 cut(s) 648
Csp6I GTAC 2 cut(s) 323, 939
CspCI CAANNNNNGTGG 2 cut(s) 433, 468
CviAII CATG 7 cut(s) 15, 20, 120, 262, 467, 480, 740
CviQI GTAC 2 cut(s) 323, 939
DdeI CTNAG 2 cut(s) 687, 812
DriI GACNNNNNGTC 1 cut(s) 699
Eam1104I CTCTTC 1 cut(s) 755
Eam1105I GACNNNNNGTC 1 cut(s) 699
EarI CTCTTC 1 cut(s) 755
Eco130I CCWWGG 4 cut(s) 119, 654, 806, 996
Eco147I AGGCCT 1 cut(s) 523
Eco24I GRGCYC 1 cut(s) 139
Eco47I GGWCC 2 cut(s) 488, 605
Eco57I CTGAAG 1 cut(s) 308
EcoRII CCWGG 1 cut(s) 637
EcoT14I CCWWGG 4 cut(s) 119, 654, 806, 996
EcoT22I ATGCAT 1 cut(s) 745
EcoT38I GRGCYC 1 cut(s) 139
ErhI CCWWGG 4 cut(s) 119, 654, 806, 996
FaeI CATG 7 cut(s) 18, 23, 123, 265, 470, 483, 743
FaqI GGGAC 2 cut(s) 311, 1034
FatI CATG 7 cut(s) 14, 19, 119, 261, 466, 479, 739
FauI CCCGC 1 cut(s) 321
FauNDI CATATG 1 cut(s) 934
FblI GTMKAC 2 cut(s) 668, 904
Fnu4HI GCNGC 8 cut(s) 51, 188, 191, 230, 271, 539, 552, 846
FokI GGATG 2 cut(s) 236, 698
FriOI GRGCYC 1 cut(s) 139
Fsp4HI GCNGC 8 cut(s) 51, 188, 191, 230, 271, 539, 552, 846
FspAI RTGCGCAY 1 cut(s) 260
FspBI CTAG 3 cut(s) 588, 600, 1035
FspI TGCGCA 1 cut(s) 260
GlaI GCGC 2 cut(s) 97, 260
GluI GCNGC 8 cut(s) 51, 188, 191, 230, 271, 539, 552, 846
HaeIII GGCC 4 cut(s) 117, 523, 931, 1001
HapII CCGG 3 cut(s) 47, 313, 530
HgaI GACGC 1 cut(s) 648
HhaI GCGC 2 cut(s) 98, 261
Hin1I GRCGYC 1 cut(s) 659
Hin1II CATG 7 cut(s) 18, 23, 123, 265, 470, 483, 743
Hin6I GCGC 2 cut(s) 96, 259
HinP1I GCGC 2 cut(s) 96, 259
HincII GTYRAC 2 cut(s) 669, 905
HindII GTYRAC 2 cut(s) 669, 905
HinfI GANTC 2 cut(s) 694, 1040
HpaII CCGG 3 cut(s) 47, 313, 530
HphI GGTGA 5 cut(s) 265, 293, 421, 700, 791
Hpy166II GTNNAC 4 cut(s) 323, 605, 669, 905
Hpy188I TCNGA 9 cut(s) 82, 242, 247, 288, 583, 690, 716, 798, 967
Hpy188III TCNNGA 1 cut(s) 486
Hpy8I GTNNAC 4 cut(s) 323, 605, 669, 905
HpyAV CCTTC 3 cut(s) 692, 982, 1051
HpyCH4III ACNGT 1 cut(s) 734
HpyCH4IV ACGT 2 cut(s) 700, 1072
HpyCH4V TGCA 5 cut(s) 14, 193, 444, 743, 866
HpyF10VI GCNNNNNNNGC 4 cut(s) 143, 267, 575, 584
HpyF3I CTNAG 2 cut(s) 687, 812
HpySE526I ACGT 2 cut(s) 700, 1072
Hsp92I GRCGYC 1 cut(s) 659
Hsp92II CATG 7 cut(s) 18, 23, 123, 265, 470, 483, 743
HspAI GCGC 2 cut(s) 96, 259
KroI GCCGGC 1 cut(s) 46
KroNI GCCGGC 1 cut(s) 48
LmnI GCTCC 2 cut(s) 43, 535
Lsp1109I GCAGC 7 cut(s) 62, 174, 177, 282, 538, 550, 832
LweI GCATC 3 cut(s) 246, 587, 752
MaeI CTAG 3 cut(s) 588, 600, 1035
MaeII ACGT 2 cut(s) 700, 1072
MaeIII GTNAC 3 cut(s) 211, 460, 706
MfeI CAATTG 1 cut(s) 822
MflI RGATCY 2 cut(s) 31, 82
MhlI GDGCHC 1 cut(s) 139
MluCI AATT 4 cut(s) 720, 750, 822, 861
MlyI GAGTC 2 cut(s) 688, 1034
MmeI TCCRAC 4 cut(s) 366, 477, 490, 1068
Mph1103I ATGCAT 1 cut(s) 745
MroNI GCCGGC 1 cut(s) 46
MseI TTAA 5 cut(s) 840, 860, 921, 1013, 1075
MslI CAYNNNNRTG 1 cut(s) 24
MspI CCGG 3 cut(s) 47, 313, 530
MspR9I CCNGG 2 cut(s) 314, 639
MunI CAATTG 1 cut(s) 822
MvaI CCWGG 1 cut(s) 639
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 4 cut(s) 143, 267, 575, 584
NaeI GCCGGC 1 cut(s) 48
NciI CCSGG 1 cut(s) 314
NcoI CCATGG 1 cut(s) 119
NdeI CATATG 1 cut(s) 934
NgoMIV GCCGGC 1 cut(s) 46
NheI GCTAGC 1 cut(s) 1034
NlaIII CATG 7 cut(s) 18, 23, 123, 265, 470, 483, 743
NlaIV GGNNCC 3 cut(s) 45, 416, 994
NmuCI GTSAC 1 cut(s) 706
NsbI TGCGCA 1 cut(s) 260
NsiI ATGCAT 1 cut(s) 745
NspI RCATGY 2 cut(s) 23, 743
PaeI GCATGC 1 cut(s) 743
PaqCI CACCTGC 2 cut(s) 429, 877
PasI CCCWGGG 1 cut(s) 638
PceI AGGCCT 1 cut(s) 523
PcsI WCGNNNNNNNCGW 2 cut(s) 106, 794
PdiI GCCGGC 1 cut(s) 48
PflMI CCANNNNNTGG 1 cut(s) 485
PkrI GCNGC 8 cut(s) 52, 189, 192, 231, 272, 540, 553, 847
PleI GAGTC 2 cut(s) 688, 1034
PpsI GAGTC 2 cut(s) 688, 1034
Psp6I CCWGG 1 cut(s) 637
PspGI CCWGG 1 cut(s) 637
PspN4I GGNNCC 3 cut(s) 45, 416, 994
PspPI GGNCC 4 cut(s) 116, 488, 605, 1000
PsuI RGATCY 2 cut(s) 31, 82
RsaI GTAC 2 cut(s) 324, 940
RsaNI GTAC 2 cut(s) 323, 939
RseI CAYNNNNRTG 1 cut(s) 24
SalI GTCGAC 2 cut(s) 667, 903
SaqAI TTAA 5 cut(s) 840, 860, 921, 1013, 1075
SatI GCNGC 8 cut(s) 51, 188, 191, 230, 271, 539, 552, 846
Sau96I GGNCC 4 cut(s) 116, 488, 605, 1000
SchI GAGTC 2 cut(s) 688, 1034
ScrFI CCNGG 2 cut(s) 314, 639
SduI GDGCHC 1 cut(s) 139
SfaNI GCATC 3 cut(s) 246, 587, 752
SfcI CTRYAG 1 cut(s) 276
SinI GGWCC 2 cut(s) 488, 605
SmiMI CAYNNNNRTG 1 cut(s) 24
SphI GCATGC 1 cut(s) 743
Sse9I AATT 4 cut(s) 720, 750, 822, 861
SseBI AGGCCT 1 cut(s) 523
SsiI CCGC 3 cut(s) 230, 328, 546
SspMI CTAG 3 cut(s) 588, 600, 1035
StuI AGGCCT 1 cut(s) 523
StyD4I CCNGG 2 cut(s) 312, 637
StyI CCWWGG 4 cut(s) 119, 654, 806, 996
TaaI ACNGT 1 cut(s) 734
TaiI ACGT 2 cut(s) 703, 1075
TaqI TCGA 7 cut(s) 7, 61, 177, 345, 394, 668, 904
TasI AATT 4 cut(s) 720, 750, 822, 861
TatI WGTACW 1 cut(s) 322
TauI GCSGC 1 cut(s) 232
Tru1I TTAA 5 cut(s) 840, 860, 921, 1013, 1075
Tru9I TTAA 5 cut(s) 840, 860, 921, 1013, 1075
TscAI CASTG 3 cut(s) 153, 498, 739
TseFI GTSAC 1 cut(s) 706
TseI GCWGC 7 cut(s) 50, 187, 190, 270, 538, 551, 845
Tsp45I GTSAC 1 cut(s) 706
TspGWI ACGGA 1 cut(s) 407
TspRI CASTG 3 cut(s) 153, 498, 739
Van91I CCANNNNNTGG 1 cut(s) 485
VpaK11BI GGWCC 2 cut(s) 488, 605
XceI RCATGY 2 cut(s) 23, 743
XmiI GTMKAC 2 cut(s) 668, 904
XspI CTAG 3 cut(s) 588, 600, 1035
Zsp2I ATGCAT 1 cut(s) 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.