Rmu_sc0013887.1_g000002

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013887.1
OG0000308
Physical Location & Seq
Reverse (-)
7564 .. 8829
1266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013887.1_g000002.1.cds

Sequence Viewer

Length: 1266 bp
atggcaattgatgcaatggccgcacgtctcgcagcctctcttgctctggcggaggggaagaggcctgtggatttacgtccatccaaaggactgcgacaacaggaggctttcatggtggggaagcttctcacagcgcgggactatacacgccgctcgtttctgggaatgttccgatctgcttggagggtgaatggcactctccgggtggaggaaactggagaagatgaccgtgtgttattctctttttcagatccggccgataaaggtagggtttggaagggagggccatgggggttcaataaggctccaattgcacttgcagagtacgatggcatcggacggatctcggaggtgccattgaggacgtcgtcgtactggatgacgttattgggggttcctccggcctttcgatctgaaagaattatgaggcttattggtagcaccgtgggcgagttcaaagagtttgataaaccagctttccggcaacggactctgcgcatacgggtggagatcgagtatgcgaaacctatattgttcacacagaggttctgggttgaagatgacgtccagtttctagtcaagttcaaatatgataagatttttggacggtgtggttttgttatccacgttggcctcccatgctccggcccggaactggaggaggctgaagaggaggttgcgggagtagtggcacaaccatctgccttagcgatccttcgtgaagaacctgggaccagctccaatgtatctagggttccggctcctggcccgactctaatcttcaaagcaacaatacctagcactattccagagttctgtctccctccagaagtagttgcttcccagcgagcaaagagacaggtacagattagggagcttacagaaccacgacaccaggtcgagtctgtccttggtcaacgccgggatagagatggtgatgaggtacttatttctcccaagaaactgaaattgagtttggctattggcaaaaagaatctggatgcagtcactatgggactgttggaagggccatcaaagcagactaaacaactgaacagaaagagaggccgacctctaggaagtgtgaataaattgccgtatggcatggcgggaaaagggaaaaatcctaagaatgagggtgactcagggaagaaggttccaaacaagagcaggaagaccaacctgatgccgaggttgttagctgctgaaagaattgaagctggtactctctccaaccctaaggggaaggagatggtgctgtcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

421

Amino Acids

46.77

Weight (kDa)

9.91

Isoelectric Point (pI)

46.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Style Settings
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000308)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g24891 FvH4_4g09031
rosa_multiflora Rmu_co8001542.1_g000001 Rmu_co8074240.1_g000001 Rmu_co8092076.1_g000001 Rmu_co8136936.1_g000001 Rmu_co8303129.1_g000001 Rmu_co8326579.1_g000001 Rmu_co8378475.1_g000001 Rmu_co8409011.1_g000001 Rmu_co8449663.1_g000001 Rmu_co8463085.1_g000001 Rmu_sc0000146.1_g000025 Rmu_sc0000294.1_g000018 Rmu_sc0000299.1_g000003 Rmu_sc0000342.1_g000003 Rmu_sc0000359.1_g000009 Rmu_sc0000431.1_g000022 Rmu_sc0000442.1_g000006 Rmu_sc0000458.1_g000011 Rmu_sc0000560.1_g000013 Rmu_sc0000594.1_g000075 Rmu_sc0000740.1_g000033 Rmu_sc0000839.1_g000002 Rmu_sc0000939.1_g000034 Rmu_sc0000955.1_g000002 Rmu_sc0001069.1_g000045 Rmu_sc0001074.1_g000019 Rmu_sc0001418.1_g000003 Rmu_sc0001484.1_g000006 Rmu_sc0001499.1_g000062 Rmu_sc0001631.1_g000002 Rmu_sc0001639.1_g000021 Rmu_sc0002146.1_g000007 Rmu_sc0002146.1_g000010 Rmu_sc0002260.1_g000065 Rmu_sc0002273.1_g000005 Rmu_sc0002310.1_g000016 Rmu_sc0002414.1_g000051 Rmu_sc0002479.1_g000003 Rmu_sc0002586.1_g000034 Rmu_sc0002586.1_g000035 Rmu_sc0002589.1_g000034 Rmu_sc0003187.1_g000020 Rmu_sc0003444.1_g000018 Rmu_sc0003633.1_g000041 Rmu_sc0003973.1_g000010 Rmu_sc0004209.1_g000004 Rmu_sc0004927.1_g000020 Rmu_sc0004950.1_g000007 Rmu_sc0004952.1_g000012 Rmu_sc0004966.1_g000001 Rmu_sc0006168.1_g000026 Rmu_sc0006325.1_g000003 Rmu_sc0006413.1_g000015 Rmu_sc0007192.1_g000002 Rmu_sc0007390.1_g000004 Rmu_sc0007847.1_g000003 Rmu_sc0008044.1_g000001 Rmu_sc0008101.1_g000008 Rmu_sc0008442.1_g000015 Rmu_sc0008714.1_g000004 Rmu_sc0009057.1_g000009 Rmu_sc0009916.1_g000015 Rmu_sc0010180.1_g000003 Rmu_sc0010560.1_g000005 Rmu_sc0010715.1_g000005 Rmu_sc0011022.1_g000002 Rmu_sc0011509.1_g000006 Rmu_sc0011831.1_g000006 Rmu_sc0012010.1_g000002 Rmu_sc0013320.1_g000007 Rmu_sc0013801.1_g000006 Rmu_sc0013801.1_g000007 Rmu_sc0013887.1_g000002 Rmu_sc0014485.1_g000014 Rmu_sc0018736.1_g000001 Rmu_sc0019355.1_g000001 Rmu_sc0020316.1_g000002 Rmu_sc0021214.1_g000001 Rmu_sc0021375.1_g000001 Rmu_sc0023412.1_g000001 Rmu_sc0024234.1_g000001 Rmu_sc0027415.1_g000001 Rmu_sc0029109.1_g000001 Rmu_sc0031708.1_g000001 Rmu_sc0035307.1_g000001 Rmu_sc0036546.1_g000001 Rmu_sc0037386.1_g000005 Rmu_sc0039204.1_g000001 Rmu_sc0039709.1_g000001 Rmu_sc0039867.1_g000001 Rmu_sc0040008.1_g000002 Rmu_sc0040009.1_g000002 Rmu_sc0041433.1_g000001 Rmu_sc0043076.1_g000001 Rmu_ssc0000024.1_g000022 Rmu_ssc0000065.1_g000003 Rmu_ssc0000100.1_g000036 Rmu_ssc0000171.1_g000015 Rmu_ssc0000190.1_g000018 Rmu_ssc0000226.1_g000017 Rmu_ssc0000244.1_g000039 Rmu_ssc0000419.1_g000008 Rmu_ssc0000451.1_g000014
rosa_roxburghii Rroxscaffold_1G00006150 Rroxscaffold_3G00219360 Rroxscaffold_5G00368320 Rroxscaffold_7G00191310
rosa_rugosa Rorug04G0060300 Rorug04G0115300 Rorug04G0128800
rosa_samantha Rh1AG029600 Rh2BG406100 Rh4DG128300 Rh5DG195500 Rh6AG427300 Rh6CG440900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 368, 567
Acc16I TGCGCA 1 cut(s) 497
AccB1I GGYRCC 1 cut(s) 352
AccBSI CCGCTC 1 cut(s) 153
AccII CGCG 1 cut(s) 136
AciI CCGC 6 cut(s) 21, 50, 136, 151, 680, 1109
AclWI GGATC 3 cut(s) 245, 350, 706
AcoI YGGCCR 2 cut(s) 18, 255
AcuI CTGAAG 1 cut(s) 687
AcyI GRCGYC 2 cut(s) 365, 564
AfaI GTAC 5 cut(s) 326, 374, 864, 945, 1225
AfiI CCNNNNNNNGG 5 cut(s) 86, 208, 644, 655, 764
AgsI TTSAA 6 cut(s) 298, 457, 557, 586, 784, 1217
AhdI GACNNNNNGTC 1 cut(s) 896
AjiI CACGTC 1 cut(s) 26
AjnI CCWGG 3 cut(s) 727, 763, 894
AjuI GAANNNNNNNTTGG 2 cut(s) 959, 991
AluBI AGCT 6 cut(s) 124, 476, 738, 877, 1202, 1220
AluI AGCT 6 cut(s) 124, 476, 738, 877, 1202, 1220
Alw26I GTCTC 3 cut(s) 32, 824, 850
AlwI GGATC 3 cut(s) 245, 350, 706
ApeKI GCWGC 2 cut(s) 32, 1202
AspLEI GCGC 2 cut(s) 136, 498
AspS9I GGNCC 5 cut(s) 284, 647, 732, 767, 1028
AsuC2I CCSGG 3 cut(s) 203, 650, 923
AsuHPI GGTGA 3 cut(s) 199, 947, 1151
AvaII GGWCC 1 cut(s) 732
AxyI CCTNAGG 1 cut(s) 1239
BanI GGYRCC 1 cut(s) 352
BbsI GAAGAC 1 cut(s) 1181
BbvI GCAGC 2 cut(s) 44, 1189
BccI CCATC 6 cut(s) 88, 323, 706, 926, 1039, 1246
BceAI ACGGC 1 cut(s) 1081
BciT130I CCWGG 3 cut(s) 729, 765, 896
BcnI CCSGG 3 cut(s) 203, 650, 923
BcoDI GTCTC 3 cut(s) 32, 824, 850
BfaI CTAG 4 cut(s) 575, 750, 798, 1076
BisI GCNGC 4 cut(s) 21, 33, 151, 1203
BlsI GCNGC 4 cut(s) 22, 34, 152, 1204
Bme1390I CCNGG 6 cut(s) 203, 650, 729, 765, 896, 923
Bme18I GGWCC 1 cut(s) 732
BmeRI GACNNNNNGTC 1 cut(s) 896
BmgBI CACGTC 1 cut(s) 26
BmgT120I GGNCC 5 cut(s) 284, 647, 732, 767, 1028
BmiI GGNNCC 7 cut(s) 306, 354, 396, 733, 756, 762, 1158
BmrFI CCNGG 6 cut(s) 203, 650, 729, 765, 896, 923
BmsI GCATC 3 cut(s) 342, 991, 1176
BpiI GAAGAC 1 cut(s) 1181
BplI GAGNNNNNCTC 2 cut(s) 1127, 1159
BpmI CTGGAG 3 cut(s) 237, 677, 810
Bpu10I CCTNAGC 1 cut(s) 706
BpuMI CCSGG 3 cut(s) 203, 650, 923
BsaHI GRCGYC 2 cut(s) 365, 564
BsaJI CCNNGG 5 cut(s) 287, 444, 728, 910, 1190
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bsc4I CCNNNNNNNGG 5 cut(s) 86, 208, 644, 655, 764
Bse1I ACTGG 4 cut(s) 220, 380, 568, 660
Bse21I CCTNAGG 1 cut(s) 1239
Bse3DI GCAATG 1 cut(s) 21
BseBI CCWGG 3 cut(s) 729, 765, 896
BseDI CCNNGG 5 cut(s) 287, 444, 728, 910, 1190
BseGI GGATG 3 cut(s) 80, 384, 1006
BseLI CCNNNNNNNGG 5 cut(s) 86, 208, 644, 655, 764
BseMI GCAATG 1 cut(s) 21
BseMII CTCAG 1 cut(s) 1158
BseNI ACTGG 4 cut(s) 220, 380, 568, 660
BseRI GAGGAG 2 cut(s) 674, 686
BseX3I CGGCCG 1 cut(s) 255
BseXI GCAGC 2 cut(s) 44, 1189
BseYI CCCAGC 1 cut(s) 843
Bsh1236I CGCG 1 cut(s) 136
Bsh1285I CGRYCG 1 cut(s) 258
BshNI GGYRCC 1 cut(s) 352
BsiEI CGRYCG 1 cut(s) 258
BsiSI CCGG 8 cut(s) 202, 254, 401, 481, 645, 650, 758, 922
BslFI GGGAC 3 cut(s) 152, 745, 1029
BslI CCNNNNNNNGG 5 cut(s) 86, 208, 644, 655, 764
BsmAI GTCTC 3 cut(s) 32, 824, 850
BsmBI CGTCTC 1 cut(s) 32
BsmFI GGGAC 3 cut(s) 152, 745, 1029
Bsp143I GATC 6 cut(s) 173, 250, 342, 410, 510, 711
Bsp19I CCATGG 1 cut(s) 287
BspACI CCGC 6 cut(s) 21, 50, 136, 151, 680, 1109
BspCNI CTCAG 1 cut(s) 1157
BspFNI CGCG 1 cut(s) 136
BspLI GGNNCC 7 cut(s) 306, 354, 396, 733, 756, 762, 1158
BspPI GGATC 3 cut(s) 245, 350, 706
BspT107I GGYRCC 1 cut(s) 352
BsrBI CCGCTC 1 cut(s) 153
BsrDI GCAATG 1 cut(s) 21
BsrI ACTGG 4 cut(s) 220, 380, 568, 660
BssECI CCNNGG 5 cut(s) 287, 444, 728, 910, 1190
BssMI GATC 6 cut(s) 173, 250, 342, 410, 510, 711
BssNI GRCGYC 2 cut(s) 365, 564
BssT1I CCWWGG 2 cut(s) 287, 910
Bst2UI CCWGG 3 cut(s) 729, 765, 896
Bst4CI ACNGT 4 cut(s) 230, 445, 609, 1020
Bst6I CTCTTC 2 cut(s) 53, 663
BstACI GRCGYC 2 cut(s) 365, 564
BstAPI GCANNNNNTGC 1 cut(s) 11
BstC8I GCNNGC 1 cut(s) 849
BstDEI CTNAG 4 cut(s) 706, 1128, 1144, 1239
BstDSI CCRYGG 2 cut(s) 287, 444
BstF5I GGATG 3 cut(s) 80, 384, 1006
BstFNI CGCG 1 cut(s) 136
BstHHI GCGC 2 cut(s) 136, 498
BstKTI GATC 6 cut(s) 176, 253, 345, 413, 513, 714
BstMAI GTCTC 3 cut(s) 32, 824, 850
BstMBI GATC 6 cut(s) 173, 250, 342, 410, 510, 711
BstMCI CGRYCG 1 cut(s) 258
BstMWI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 41, 311, 447, 639, 1036
BstNI CCWGG 3 cut(s) 729, 765, 896
BstSCI CCNGG 6 cut(s) 201, 648, 727, 763, 894, 921
BstUI CGCG 1 cut(s) 136
BstV1I GCAGC 2 cut(s) 44, 1189
BstV2I GAAGAC 1 cut(s) 1181
BstX2I RGATCY 2 cut(s) 250, 342
BstYI RGATCY 2 cut(s) 250, 342
BstZI CGGCCG 1 cut(s) 255
Bsu36I CCTNAGG 1 cut(s) 1239
BtgI CCRYGG 2 cut(s) 287, 444
BtrI CACGTC 1 cut(s) 26
BtsCI GGATG 3 cut(s) 80, 384, 1006
Cac8I GCNNGC 1 cut(s) 849
CfoI GCGC 2 cut(s) 136, 498
Cfr13I GGNCC 5 cut(s) 284, 647, 732, 767, 1028
CsiI ACCWGGT 1 cut(s) 894
Csp6I GTAC 5 cut(s) 325, 373, 863, 944, 1224
CviAII CATG 4 cut(s) 112, 288, 639, 1105
CviQI GTAC 5 cut(s) 325, 373, 863, 944, 1224
DdeI CTNAG 4 cut(s) 706, 1128, 1144, 1239
DpnI GATC 6 cut(s) 175, 252, 344, 412, 512, 713
DpnII GATC 6 cut(s) 173, 250, 342, 410, 510, 711
DriI GACNNNNNGTC 1 cut(s) 896
EaeI YGGCCR 2 cut(s) 18, 255
EagI CGGCCG 1 cut(s) 255
Eam1104I CTCTTC 2 cut(s) 53, 663
Eam1105I GACNNNNNGTC 1 cut(s) 896
EarI CTCTTC 2 cut(s) 53, 663
EciI GGCGGA 1 cut(s) 65
EclXI CGGCCG 1 cut(s) 255
Eco130I CCWWGG 2 cut(s) 287, 910
Eco147I AGGCCT 1 cut(s) 64
Eco47I GGWCC 1 cut(s) 732
Eco52I CGGCCG 1 cut(s) 255
Eco57I CTGAAG 1 cut(s) 687
Eco81I CCTNAGG 1 cut(s) 1239
EcoRII CCWGG 3 cut(s) 727, 763, 894
EcoT14I CCWWGG 2 cut(s) 287, 910
ErhI CCWWGG 2 cut(s) 287, 910
Esp3I CGTCTC 1 cut(s) 32
FaeI CATG 4 cut(s) 115, 291, 642, 1108
FaqI GGGAC 3 cut(s) 152, 745, 1029
FatI CATG 4 cut(s) 111, 287, 638, 1104
FauI CCCGC 3 cut(s) 129, 673, 1102
Fnu4HI GCNGC 4 cut(s) 21, 33, 151, 1203
FokI GGATG 3 cut(s) 67, 391, 1013
Fsp4HI GCNGC 4 cut(s) 21, 33, 151, 1203
FspBI CTAG 4 cut(s) 575, 750, 798, 1076
FspI TGCGCA 1 cut(s) 497
GlaI GCGC 2 cut(s) 135, 497
GluI GCNGC 4 cut(s) 21, 33, 151, 1203
GsaI CCCAGC 1 cut(s) 847
GsuI CTGGAG 3 cut(s) 237, 677, 810
HapII CCGG 8 cut(s) 202, 254, 401, 481, 645, 650, 758, 922
HhaI GCGC 2 cut(s) 136, 498
Hin1I GRCGYC 2 cut(s) 365, 564
Hin1II CATG 4 cut(s) 115, 291, 642, 1108
Hin6I GCGC 2 cut(s) 134, 496
HinP1I GCGC 2 cut(s) 134, 496
HincII GTYRAC 1 cut(s) 917
HindII GTYRAC 1 cut(s) 917
HindIII AAGCTT 1 cut(s) 122
HinfI GANTC 5 cut(s) 490, 772, 902, 994, 1142
HpaII CCGG 8 cut(s) 202, 254, 401, 481, 645, 650, 758, 922
HphI GGTGA 3 cut(s) 199, 947, 1151
Hpy166II GTNNAC 2 cut(s) 537, 917
Hpy188I TCNGA 5 cut(s) 173, 250, 338, 349, 415
Hpy188III TCNNGA 4 cut(s) 719, 809, 827, 998
Hpy8I GTNNAC 2 cut(s) 537, 917
Hpy99I CGWCG 2 cut(s) 370, 373
HpyAV CCTTC 5 cut(s) 271, 725, 1019, 1147, 1240
HpyCH4III ACNGT 4 cut(s) 230, 445, 609, 1020
HpyCH4IV ACGT 6 cut(s) 25, 76, 365, 383, 564, 627
HpyCH4V TGCA 4 cut(s) 14, 314, 320, 1004
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 41, 311, 447, 639, 1036
HpyF3I CTNAG 4 cut(s) 706, 1128, 1144, 1239
HpySE526I ACGT 6 cut(s) 25, 76, 365, 383, 564, 627
Hsp92I GRCGYC 2 cut(s) 365, 564
Hsp92II CATG 4 cut(s) 115, 291, 642, 1108
HspAI GCGC 2 cut(s) 134, 496
Kzo9I GATC 6 cut(s) 173, 250, 342, 410, 510, 711
LmnI GCTCC 5 cut(s) 310, 647, 743, 766, 874
Lsp1109I GCAGC 2 cut(s) 44, 1189
LweI GCATC 3 cut(s) 342, 991, 1176
MabI ACCWGGT 1 cut(s) 894
MaeI CTAG 4 cut(s) 575, 750, 798, 1076
MaeII ACGT 6 cut(s) 25, 76, 365, 383, 564, 627
MaeIII GTNAC 2 cut(s) 1006, 1139
MalI GATC 6 cut(s) 175, 252, 344, 412, 512, 713
MbiI CCGCTC 1 cut(s) 153
MboI GATC 6 cut(s) 173, 250, 342, 410, 510, 711
MboII GAAGA 8 cut(s) 70, 233, 569, 680, 734, 772, 1162, 1186
MfeI CAATTG 2 cut(s) 6, 309
MflI RGATCY 2 cut(s) 250, 342
MluCI AATT 6 cut(s) 6, 309, 420, 968, 1091, 1212
MlyI GAGTC 4 cut(s) 484, 766, 911, 1136
MmeI TCCRAC 2 cut(s) 1002, 1257
MseI TTAA 1 cut(s) 1264
MslI CAYNNNNRTG 1 cut(s) 503
MspI CCGG 8 cut(s) 202, 254, 401, 481, 645, 650, 758, 922
MspR9I CCNGG 6 cut(s) 203, 650, 729, 765, 896, 923
MunI CAATTG 2 cut(s) 6, 309
MvaI CCWGG 3 cut(s) 729, 765, 896
MvnI CGCG 1 cut(s) 136
MwoI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 41, 311, 447, 639, 1036
NciI CCSGG 3 cut(s) 203, 650, 923
NcoI CCATGG 1 cut(s) 287
NdeII GATC 6 cut(s) 173, 250, 342, 410, 510, 711
NlaIII CATG 4 cut(s) 115, 291, 642, 1108
NlaIV GGNNCC 7 cut(s) 306, 354, 396, 733, 756, 762, 1158
NmeAIII GCCGAG 1 cut(s) 1215
NmuCI GTSAC 2 cut(s) 1006, 1139
NsbI TGCGCA 1 cut(s) 497
PceI AGGCCT 1 cut(s) 64
PfeI GAWTC 1 cut(s) 994
PflFI GACNNNGTC 1 cut(s) 367
PkrI GCNGC 4 cut(s) 22, 34, 152, 1204
PleI GAGTC 4 cut(s) 484, 766, 910, 1136
PpsI GAGTC 4 cut(s) 484, 766, 910, 1136
Psp6I CCWGG 3 cut(s) 727, 763, 894
PspFI CCCAGC 1 cut(s) 843
PspGI CCWGG 3 cut(s) 727, 763, 894
PspN4I GGNNCC 7 cut(s) 306, 354, 396, 733, 756, 762, 1158
PspPI GGNCC 5 cut(s) 284, 647, 732, 767, 1028
PsrI GAACNNNNNNTAC 2 cut(s) 738, 770
PsuI RGATCY 2 cut(s) 250, 342
PsyI GACNNNGTC 1 cut(s) 367
RsaI GTAC 5 cut(s) 326, 374, 864, 945, 1225
RsaNI GTAC 5 cut(s) 325, 373, 863, 944, 1224
RseI CAYNNNNRTG 1 cut(s) 503
SaqAI TTAA 1 cut(s) 1264
SatI GCNGC 4 cut(s) 21, 33, 151, 1203
Sau3AI GATC 6 cut(s) 173, 250, 342, 410, 510, 711
Sau96I GGNCC 5 cut(s) 284, 647, 732, 767, 1028
SchI GAGTC 4 cut(s) 484, 766, 911, 1136
ScrFI CCNGG 6 cut(s) 203, 650, 729, 765, 896, 923
SexAI ACCWGGT 1 cut(s) 894
SfaNI GCATC 3 cut(s) 342, 991, 1176
SinI GGWCC 1 cut(s) 732
SmiMI CAYNNNNRTG 1 cut(s) 503
Sse9I AATT 6 cut(s) 6, 309, 420, 968, 1091, 1212
SseBI AGGCCT 1 cut(s) 64
SsiI CCGC 6 cut(s) 21, 50, 136, 151, 680, 1109
SspMI CTAG 4 cut(s) 575, 750, 798, 1076
StuI AGGCCT 1 cut(s) 64
StyD4I CCNGG 6 cut(s) 201, 648, 727, 763, 894, 921
StyI CCWWGG 2 cut(s) 287, 910
TaaI ACNGT 4 cut(s) 230, 445, 609, 1020
TaiI ACGT 6 cut(s) 28, 79, 368, 386, 567, 630
TaqI TCGA 3 cut(s) 409, 513, 900
TasI AATT 6 cut(s) 6, 309, 420, 968, 1091, 1212
TauI GCSGC 2 cut(s) 23, 153
TfiI GAWTC 1 cut(s) 994
Tru1I TTAA 1 cut(s) 1264
Tru9I TTAA 1 cut(s) 1264
TseFI GTSAC 2 cut(s) 1006, 1139
TseI GCWGC 2 cut(s) 32, 1202
Tsp45I GTSAC 2 cut(s) 1006, 1139
TspDTI ATGAA 1 cut(s) 100
TspGWI ACGGA 2 cut(s) 355, 502
Tth111I GACNNNGTC 1 cut(s) 367
VpaK11BI GGWCC 1 cut(s) 732
XspI CTAG 4 cut(s) 575, 750, 798, 1076
ZraI GACGTC 2 cut(s) 366, 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.