ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 479 |
| AccII | CGCG | 1 cut(s) | 13 |
| AciI | CCGC | 2 cut(s) | 479, 488 |
| AclWI | GGATC | 1 cut(s) | 71 |
| AcoI | YGGCCR | 1 cut(s) | 388 |
| AcuI | CTGAAG | 1 cut(s) | 257 |
| AfaI | GTAC | 3 cut(s) | 273, 374, 507 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 334, 437 |
| AgsI | TTSAA | 3 cut(s) | 86, 353, 571 |
| AjiI | CACGTC | 1 cut(s) | 495 |
| AluBI | AGCT | 1 cut(s) | 602 |
| AluI | AGCT | 1 cut(s) | 602 |
| AlwI | GGATC | 1 cut(s) | 71 |
| AoxI | GGCC | 4 cut(s) | 388, 406, 424, 440 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 368, 400 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 603 |
| AspLEI | GCGC | 2 cut(s) | 13, 199 |
| AspS9I | GGNCC | 2 cut(s) | 440, 484 |
| AvaII | GGWCC | 1 cut(s) | 484 |
| BanII | GRGCYC | 1 cut(s) | 184 |
| BceAI | ACGGC | 2 cut(s) | 176, 312 |
| BciVI | GTATCC | 1 cut(s) | 164 |
| BfaI | CTAG | 1 cut(s) | 410 |
| BfmI | CTRYAG | 1 cut(s) | 186 |
| BfuI | GTATCC | 1 cut(s) | 164 |
| BmcAI | AGTACT | 1 cut(s) | 507 |
| Bme18I | GGWCC | 1 cut(s) | 484 |
| BmgBI | CACGTC | 1 cut(s) | 495 |
| BmgT120I | GGNCC | 2 cut(s) | 440, 484 |
| BmiI | GGNNCC | 2 cut(s) | 183, 486 |
| BmsI | GCATC | 1 cut(s) | 454 |
| Bpu10I | CCTNAGC | 1 cut(s) | 436 |
| BsaWI | WCCGGW | 1 cut(s) | 23 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 334, 437 |
| Bse118I | RCCGGY | 2 cut(s) | 277, 390 |
| Bse1I | ACTGG | 1 cut(s) | 470 |
| Bse3DI | GCAATG | 1 cut(s) | 260 |
| BseGI | GGATG | 2 cut(s) | 245, 261 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 334, 437 |
| BseMI | GCAATG | 1 cut(s) | 260 |
| BseMII | CTCAG | 2 cut(s) | 450, 590 |
| BseNI | ACTGG | 1 cut(s) | 470 |
| Bsh1236I | CGCG | 1 cut(s) | 13 |
| BshFI | GGCC | 4 cut(s) | 390, 408, 426, 442 |
| BsiSI | CCGG | 5 cut(s) | 24, 218, 278, 391, 443 |
| BslFI | GGGAC | 1 cut(s) | 528 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 334, 437 |
| BsmFI | GGGAC | 1 cut(s) | 528 |
| BsnI | GGCC | 4 cut(s) | 390, 408, 426, 442 |
| Bsp1286I | GDGCHC | 1 cut(s) | 184 |
| Bsp143I | GATC | 3 cut(s) | 63, 294, 564 |
| BspACI | CCGC | 2 cut(s) | 479, 488 |
| BspANI | GGCC | 4 cut(s) | 390, 408, 426, 442 |
| BspCNI | CTCAG | 2 cut(s) | 449, 589 |
| BspFNI | CGCG | 1 cut(s) | 13 |
| BspLI | GGNNCC | 2 cut(s) | 183, 486 |
| BspPI | GGATC | 1 cut(s) | 71 |
| BsrBI | CCGCTC | 1 cut(s) | 479 |
| BsrDI | GCAATG | 1 cut(s) | 260 |
| BsrFI | RCCGGY | 2 cut(s) | 277, 390 |
| BsrI | ACTGG | 1 cut(s) | 470 |
| BssAI | RCCGGY | 2 cut(s) | 277, 390 |
| BssMI | GATC | 3 cut(s) | 63, 294, 564 |
| Bst4CI | ACNGT | 1 cut(s) | 209 |
| Bst6I | CTCTTC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 3 cut(s) | 77, 436, 576 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 435 |
| BstF5I | GGATG | 2 cut(s) | 245, 261 |
| BstFNI | CGCG | 1 cut(s) | 13 |
| BstHHI | GCGC | 2 cut(s) | 13, 199 |
| BstKTI | GATC | 3 cut(s) | 66, 297, 567 |
| BstMBI | GATC | 3 cut(s) | 63, 294, 564 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 10, 188, 432 |
| BstNSI | RCATGY | 1 cut(s) | 46 |
| BstSFI | CTRYAG | 1 cut(s) | 186 |
| BstUI | CGCG | 1 cut(s) | 13 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 499 |
| BsuI | GTATCC | 1 cut(s) | 164 |
| BsuRI | GGCC | 4 cut(s) | 390, 408, 426, 442 |
| BtrI | CACGTC | 1 cut(s) | 495 |
| BtsCI | GGATG | 2 cut(s) | 245, 261 |
| BtsI | GCAGTG | 1 cut(s) | 6 |
| BtsIMutI | CAGTG | 3 cut(s) | 6, 214, 233 |
| CfoI | GCGC | 2 cut(s) | 13, 199 |
| Cfr10I | RCCGGY | 2 cut(s) | 277, 390 |
| Cfr13I | GGNCC | 2 cut(s) | 440, 484 |
| Csp6I | GTAC | 3 cut(s) | 272, 373, 506 |
| CviAII | CATG | 5 cut(s) | 43, 57, 358, 419, 518 |
| CviJI | RGCY | 9 cut(s) | 182, 191, 310, 390, 408, 426, 442, 575, 602 |
| CviKI_1 | RGCY | 9 cut(s) | 182, 191, 310, 390, 408, 426, 442, 575, 602 |
| CviQI | GTAC | 3 cut(s) | 272, 373, 506 |
| DdeI | CTNAG | 3 cut(s) | 77, 436, 576 |
| DpnI | GATC | 3 cut(s) | 65, 296, 566 |
| DpnII | GATC | 3 cut(s) | 63, 294, 564 |
| EaeI | YGGCCR | 1 cut(s) | 388 |
| Eam1104I | CTCTTC | 1 cut(s) | 81 |
| EarI | CTCTTC | 1 cut(s) | 81 |
| Eco24I | GRGCYC | 1 cut(s) | 184 |
| Eco47I | GGWCC | 1 cut(s) | 484 |
| Eco57I | CTGAAG | 1 cut(s) | 257 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 435 |
| EcoT38I | GRGCYC | 1 cut(s) | 184 |
| FaeI | CATG | 5 cut(s) | 46, 60, 361, 422, 521 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 299, 331, 591 |
| FaqI | GGGAC | 1 cut(s) | 528 |
| FatI | CATG | 5 cut(s) | 42, 56, 357, 418, 517 |
| FauI | CCCGC | 1 cut(s) | 495 |
| FokI | GGATG | 2 cut(s) | 232, 268 |
| FriOI | GRGCYC | 1 cut(s) | 184 |
| FspBI | CTAG | 1 cut(s) | 410 |
| GlaI | GCGC | 2 cut(s) | 12, 198 |
| HaeIII | GGCC | 4 cut(s) | 390, 408, 426, 442 |
| HapII | CCGG | 5 cut(s) | 24, 218, 278, 391, 443 |
| HhaI | GCGC | 2 cut(s) | 13, 199 |
| Hin1II | CATG | 5 cut(s) | 46, 60, 361, 422, 521 |
| Hin6I | GCGC | 2 cut(s) | 11, 197 |
| HinP1I | GCGC | 2 cut(s) | 11, 197 |
| HpaII | CCGG | 5 cut(s) | 24, 218, 278, 391, 443 |
| Hpy166II | GTNNAC | 3 cut(s) | 117, 484, 550 |
| Hpy188I | TCNGA | 2 cut(s) | 287, 579 |
| Hpy8I | GTNNAC | 3 cut(s) | 117, 484, 550 |
| HpyAV | CCTTC | 2 cut(s) | 141, 437 |
| HpyCH4III | ACNGT | 1 cut(s) | 209 |
| HpyCH4IV | ACGT | 1 cut(s) | 494 |
| HpyCH4V | TGCA | 5 cut(s) | 56, 265, 305, 364, 467 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 10, 188, 432 |
| HpyF3I | CTNAG | 3 cut(s) | 77, 436, 576 |
| HpySE526I | ACGT | 1 cut(s) | 494 |
| Hsp92II | CATG | 5 cut(s) | 46, 60, 361, 422, 521 |
| HspAI | GCGC | 2 cut(s) | 11, 197 |
| Kzo9I | GATC | 3 cut(s) | 63, 294, 564 |
| LmnI | GCTCC | 2 cut(s) | 187, 476 |
| LweI | GCATC | 1 cut(s) | 454 |
| MaeI | CTAG | 1 cut(s) | 410 |
| MaeII | ACGT | 1 cut(s) | 494 |
| MaeIII | GTNAC | 1 cut(s) | 412 |
| MalI | GATC | 3 cut(s) | 65, 296, 566 |
| MbiI | CCGCTC | 1 cut(s) | 479 |
| MboI | GATC | 3 cut(s) | 63, 294, 564 |
| MboII | GAAGA | 7 cut(s) | 98, 110, 250, 353, 467, 559, 599 |
| MhlI | GDGCHC | 1 cut(s) | 184 |
| MluCI | AATT | 3 cut(s) | 50, 353, 365 |
| MmeI | TCCRAC | 1 cut(s) | 454 |
| MnlI | CCTC | 3 cut(s) | 152, 321, 445 |
| MroXI | GAANNNNTTC | 1 cut(s) | 603 |
| MseI | TTAA | 1 cut(s) | 528 |
| MspI | CCGG | 5 cut(s) | 24, 218, 278, 391, 443 |
| MvnI | CGCG | 1 cut(s) | 13 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 10, 188, 432 |
| NdeII | GATC | 3 cut(s) | 63, 294, 564 |
| NlaIII | CATG | 5 cut(s) | 46, 60, 361, 422, 521 |
| NlaIV | GGNNCC | 2 cut(s) | 183, 486 |
| NspI | RCATGY | 1 cut(s) | 46 |
| PdmI | GAANNNNTTC | 1 cut(s) | 603 |
| PflFI | GACNNNGTC | 1 cut(s) | 209 |
| PspN4I | GGNNCC | 2 cut(s) | 183, 486 |
| PspPI | GGNCC | 2 cut(s) | 440, 484 |
| PsyI | GACNNNGTC | 1 cut(s) | 209 |
| RsaI | GTAC | 3 cut(s) | 273, 374, 507 |
| RsaNI | GTAC | 3 cut(s) | 272, 373, 506 |
| SaqAI | TTAA | 1 cut(s) | 528 |
| Sau3AI | GATC | 3 cut(s) | 63, 294, 564 |
| Sau96I | GGNCC | 2 cut(s) | 440, 484 |
| ScaI | AGTACT | 1 cut(s) | 507 |
| SduI | GDGCHC | 1 cut(s) | 184 |
| SetI | ASST | 5 cut(s) | 497, 528, 563, 586, 604 |
| SfaNI | GCATC | 1 cut(s) | 454 |
| SfcI | CTRYAG | 1 cut(s) | 186 |
| SgrAI | CRCCGGYG | 1 cut(s) | 277 |
| SinI | GGWCC | 1 cut(s) | 484 |
| Sse9I | AATT | 3 cut(s) | 50, 353, 365 |
| SsiI | CCGC | 2 cut(s) | 479, 488 |
| SspI | AATATT | 1 cut(s) | 20 |
| SspMI | CTAG | 1 cut(s) | 410 |
| TaaI | ACNGT | 1 cut(s) | 209 |
| TaiI | ACGT | 1 cut(s) | 497 |
| TaqI | TCGA | 1 cut(s) | 297 |
| TasI | AATT | 3 cut(s) | 50, 353, 365 |
| TatI | WGTACW | 1 cut(s) | 505 |
| Tru1I | TTAA | 1 cut(s) | 528 |
| Tru9I | TTAA | 1 cut(s) | 528 |
| TscAI | CASTG | 3 cut(s) | 13, 214, 240 |
| TspDTI | ATGAA | 3 cut(s) | 346, 360, 534 |
| TspRI | CASTG | 3 cut(s) | 13, 214, 240 |
| Tth111I | GACNNNGTC | 1 cut(s) | 209 |
| VpaK11BI | GGWCC | 1 cut(s) | 484 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 435 |
| XceI | RCATGY | 1 cut(s) | 46 |
| XmnI | GAANNNNTTC | 1 cut(s) | 603 |
| XspI | CTAG | 1 cut(s) | 410 |
| ZrmI | AGTACT | 1 cut(s) | 507 |