AT1G05080

Leucine Rich Repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000140
Physical Location & Seq
Forward (+)
1459091 .. 1460579
1489 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G05080.1

Sequence Viewer

Length: 1320 bp
ATGGCGGAAGCCAAAATTGAAGAGATCGGTTGTGAAGACAGGATCAGTGTTTTACCGGAAGATTTACTCGTAGTGATATTGGATCTTCTCCCGACAAAAGACGTAGTAGCCACCATGATTCTGTCAAAACGATGGCTCTCGATTTGGACGATGGTAAGGACACTTGAGTATACAGATGACATGGATGATGAAAGCAAGAAGAGCGTTTGGTGGTTTCTTAACAAATCATTGCAACTCCACAAGGCGCCTGTAATAGACAGCTTGTGCATGGAACTTGGTCCACAGTGCCCTACCACTGATGATGTTGATATCGGAAAGTGGGTTGCAAAAGCTGTTGATTGTTTGGTGATGACGCTAACAATCAAGCTCCTCTGGTCCGCAGGTCCAACCAGCTTGCCCAAGAGCCTTTACTCTTGCACCTCTCTTTCTGAACTGACTCTCTCTGACCAGATTCTCGTGAATGTTCCTTCTTCCGCCTATCTCCCATCCCTTACAGAGCTCGAACTAATCTGTGTTGTGTATAAAGACGAGGATTCTCTTGTTAGCTTCTTATCGAGCTGCCCTGTTCTTGAGTTCTTGTTCGTGCTAAGGAAAATAGATGACAATGTGAAAACGTTTACTGTCAAAGTGCCTTCTTTATTGGAGTTAACGTATAAGAATCTCTGCTCTGATGTAGTAGACAATACCGATAGGTGTTTGGTTGTAAATGCTCCTGCAGTGAACACCTGTCAAATCACTGATTATTCACTAGAATCTTTCTCCATCGAGGATATGCCCTGTCTCCAGGATGCAACTATCGATGTAGATGAGGCTTATCATCCGGATGACAAATTTCTAACATCTTTTTCTTCAGTCTTGTCTCTTCGAATGCATTTGTCTGATGCAATGGTTATGCGTTGTACCACCATCAACTTCTCTCGACTAATAAAGTTAAGCATATATCCCTATGGACCAGACATGTTGGAAACACTCCTACGTTTACTTGGAAATGCTCCAAAACTAAAAGAGTTTTTGGTAGATTATCCCTCCCTTATTGCTTCTCAGAAATTTGTCTATAATCCCGAGGATCTCCCATGGTCATGGAAACAACCGAGTCATGTTCCCGAATGCTTGTCATCACAGCTCGAGATATTCGAGTGGAGAGACTATGGGGATAGAATAATAGAGGAAGAATTCTTGACATACGTTTTGGCCAACTCTAAGCGTTTAAAAACCGCAACAATCTCCCTGAGGTTAAATCTTGAAGATCCAGAGTTGATCATCGAGGAAATAAAAGACCTTCCTAGGGTTTCAACAACATCTCACCTTTTGTTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

439

Amino Acids

49.88

Weight (kDa)

4.58

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 53 1.2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 98 - 344 2.6e-06 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 122 - 238 8.4e-11 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 163 - 188 9.2e-06 Leucine Rich Repeat
FBD PF08387 363 - 408 3.2e-18 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05080 AT1G19410 AT1G22000 AT1G26815 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G32375 AT1G32375 AT1G50980 AT1G51055 AT1G55030 AT1G55030 AT1G55660 AT1G55660 AT2G04230 AT2G26860 AT2G26860 AT3G10750 AT3G26920 AT3G26920 AT3G26920 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26930 AT3G26930 AT3G49020 AT3G49030 AT3G49030 AT3G49040 AT3G49045 AT3G49480 AT3G49480 AT3G50710 AT3G51530 AT3G52680 AT3G52680 AT3G52690 AT3G53550 AT3G54910 AT3G54910 AT3G54910 AT3G55670 AT4G00160 AT4G00315 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G10400 AT4G10400 AT4G10400 AT4G10410 AT4G10420 AT4G13965 AT4G15060 AT4G15060 AT4G15075 AT4G26340 AT4G26350 AT5G11370 AT5G38565 AT5G38570 AT5G38580 AT5G38590 AT5G38590 AT5G38590 AT5G38590 AT5G40750 AT5G44850 AT5G50270 AT5G50270 AT5G52460 AT5G52460 AT5G56325 AT5G56370 AT5G56370 AT5G56370 AT5G56380 AT5G56380 AT5G56390 AT5G56400 AT5G56410 AT5G56420 AT5G56420 AT5G56420 AT5G56430 AT5G56440 AT5G56452 AT5G56452 AT5G56555 AT5G56560 AT5G56560 AT5G56570 AT5G56690 AT5G56700 AT5G56700 AT5G56800 AT5G56810 AT5G56810 AT5G56820 AT5G60610 AT5G60610 AT5G62970
malus_domestica MD10G1316000.v1.1
prunus_persica Prupe.4G024600_v2.0.a1
pyrus_communis pycom10g26820
rosa_chinensis RchiOBHm_Chr1g0383101 RchiOBHm_Chr5g0003811 RchiOBHm_Chr5g0069761 RchiOBHm_Chr5g0069771 RchiOBHm_Chr5g0069781 RchiOBHm_Chr5g0069791 RchiOBHm_Chr5g0069821 RchiOBHm_Chr5g0069831
rosa_laevigata RLG00000026130 RLG00000026375 RLG00000031193 RLG00000036088 RLG00000036089 RLG00000036090 RLG00000036095 RLG00000036096 RLG00000036097 RLG00000036099 RLG00000036100
rosa_multiflora Rmu_co8192842.1_g000001 Rmu_co8209784.1_g000001 Rmu_sc0000726.1_g000001 Rmu_sc0000726.1_g000003 Rmu_sc0000726.1_g000007 Rmu_sc0000726.1_g000008 Rmu_sc0000738.1_g000009 Rmu_sc0000738.1_g000010 Rmu_sc0000738.1_g000011 Rmu_sc0000738.1_g000015 Rmu_sc0000738.1_g000018 Rmu_sc0000738.1_g000019 Rmu_sc0004212.1_g000009 Rmu_sc0017283.1_g000003 Rmu_sc0024481.1_g000001
rosa_roxburghii Rroxscaffold_1G00011240 Rroxscaffold_1G00011270 Rroxscaffold_1G00011280 Rroxscaffold_1G00011300 Rroxscaffold_1G00011310 Rroxscaffold_1G00011320 Rroxscaffold_4G00277590
rosa_rugosa Rorug01G0413100 Rorug01G0438500 Rorug01G0438600 Rorug04G0406800 Rorug05G0399300 Rorug05G0399400 Rorug05G0399500 Rorug05G0399600 Rorug05G0399700 Rorug05G0399900.1 Rorug05G0400000 Rorug05G0400100
rosa_samantha Rh1AG436100 Rh1AG464200 Rh1BG421500 Rh1CG434900 Rh1DG454100 Rh5AG034000 Rh5AG034100 Rh5AG456400 Rh5AG456500 Rh5AG456600 Rh5AG456800 Rh5AG457000 Rh5BG032600 Rh5BG475500 Rh5BG475600 Rh5BG475800 Rh5BG475900 Rh5CG036600 Rh5CG036700 Rh5CG499100 Rh5CG499200 Rh5CG499400 Rh5CG499600 Rh5DG032800 Rh5DG487000 Rh5DG487100 Rh5DG487200 Rh5DG487400 Rh5DG487500
rosa_wichuraiana Rw5G003130 Rw5G042610 Rw5G042630 Rw5G042650 Rw5G042660 Rw5G042670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 371
AccB1I GGYRCC 1 cut(s) 244
AccI GTMKAC 2 cut(s) 170, 678
AccIII TCCGGA 1 cut(s) 820
AciI CCGC 4 cut(s) 5, 378, 474, 1215
AclI AACGTT 1 cut(s) 614
AclWI GGATC 4 cut(s) 50, 90, 1074, 1241
AcoI YGGCCR 1 cut(s) 1191
AcsI RAATTY 3 cut(s) 830, 1046, 1172
AcuI CTGAAG 1 cut(s) 834
AcyI GRCGYC 1 cut(s) 245
AfaI GTAC 1 cut(s) 901
AfiI CCNNNNNNNGG 1 cut(s) 1285
AflIII ACRYGT 1 cut(s) 957
AgsI TTSAA 4 cut(s) 20, 1244, 1293, 1315
AjnI CCWGG 1 cut(s) 783
AluBI AGCT 8 cut(s) 261, 332, 367, 393, 499, 546, 558, 1123
AluI AGCT 8 cut(s) 261, 332, 367, 393, 499, 546, 558, 1123
Alw21I GWGCWC 1 cut(s) 501
Alw26I GTCTC 3 cut(s) 785, 864, 1137
AlwI GGATC 4 cut(s) 50, 90, 1074, 1241
Ama87I CYCGRG 2 cut(s) 1061, 1124
Aor13HI TCCGGA 1 cut(s) 820
AoxI GGCC 1 cut(s) 1191
ApeKI GCWGC 1 cut(s) 558
ApoI RAATTY 3 cut(s) 830, 1046, 1172
ArsI GACNNNNNNTTYG 2 cut(s) 1171, 1203
AspA2I CCTAGG 1 cut(s) 1283
AspLEI GCGC 1 cut(s) 247
AspS9I GGNCC 4 cut(s) 278, 375, 383, 950
AsuHPI GGTGA 2 cut(s) 358, 1295
AsuII TTCGAA 1 cut(s) 865
AvaI CYCGRG 2 cut(s) 1061, 1124
AvaII GGWCC 4 cut(s) 278, 375, 383, 950
AvrII CCTAGG 1 cut(s) 1283
AxyI CCTNAGG 1 cut(s) 1229
BaeGI GKGCMC 1 cut(s) 290
BalI TGGCCA 1 cut(s) 1193
BanI GGYRCC 1 cut(s) 244
BanII GRGCYC 1 cut(s) 501
BauI CACGAG 1 cut(s) 455
BbsI GAAGAC 1 cut(s) 42
Bbv12I GWGCWC 1 cut(s) 501
BbvI GCAGC 1 cut(s) 545
BccI CCATC 5 cut(s) 126, 145, 493, 770, 914
BciT130I CCWGG 1 cut(s) 785
BclI TGATCA 1 cut(s) 1257
BcoDI GTCTC 3 cut(s) 785, 864, 1137
BfaI CTAG 2 cut(s) 749, 1284
BfmI CTRYAG 1 cut(s) 714
BfoI RGCGCY 1 cut(s) 248
BfuAI ACCTGC 1 cut(s) 371
BisI GCNGC 1 cut(s) 559
BlnI CCTAGG 1 cut(s) 1283
BlsI GCNGC 1 cut(s) 560
Bme1390I CCNGG 1 cut(s) 785
Bme18I GGWCC 4 cut(s) 278, 375, 383, 950
BmeT110I CYCGRG 2 cut(s) 1061, 1124
BmgT120I GGNCC 4 cut(s) 278, 375, 383, 950
BmiI GGNNCC 1 cut(s) 246
BmrFI CCNGG 1 cut(s) 785
BmsI GCATC 2 cut(s) 778, 871
BpiI GAAGAC 1 cut(s) 42
BpmI CTGGAG 1 cut(s) 767
Bpu10I CCTNAGC 1 cut(s) 587
Bpu14I TTCGAA 1 cut(s) 865
BpuEI CTTGAG 2 cut(s) 185, 590
Bsa29I ATCGAT 1 cut(s) 798
BsaHI GRCGYC 1 cut(s) 245
BsaJI CCNNGG 3 cut(s) 1062, 1073, 1283
BsaWI WCCGGW 2 cut(s) 55, 820
BsaXI ACNNNNNCTCC 2 cut(s) 635, 665
Bsc4I CCNNNNNNNGG 1 cut(s) 1285
Bse21I CCTNAGG 1 cut(s) 1229
Bse3DI GCAATG 2 cut(s) 227, 891
BseAI TCCGGA 1 cut(s) 820
BseBI CCWGG 1 cut(s) 785
BseCI ATCGAT 1 cut(s) 798
BseDI CCNNGG 3 cut(s) 1062, 1073, 1283
BseGI GGATG 5 cut(s) 190, 485, 793, 817, 829
BseLI CCNNNNNNNGG 1 cut(s) 1285
BseMI GCAATG 2 cut(s) 227, 891
BseMII CTCAG 2 cut(s) 1055, 1220
BseRI GAGGAG 1 cut(s) 359
BseSI GKGCMC 1 cut(s) 290
BseXI GCAGC 1 cut(s) 545
BshFI GGCC 1 cut(s) 1193
BshNI GGYRCC 1 cut(s) 244
BshVI ATCGAT 1 cut(s) 798
BsiHKAI GWGCWC 1 cut(s) 501
BsiHKCI CYCGRG 2 cut(s) 1061, 1124
BsiSI CCGG 2 cut(s) 56, 821
BslI CCNNNNNNNGG 1 cut(s) 1285
BsmAI GTCTC 3 cut(s) 785, 864, 1137
BsmI GAATGC 2 cut(s) 873, 1112
BsnI GGCC 1 cut(s) 1193
BsoBI CYCGRG 2 cut(s) 1061, 1124
Bsp119I TTCGAA 1 cut(s) 865
Bsp1286I GDGCHC 2 cut(s) 290, 501
Bsp13I TCCGGA 1 cut(s) 820
Bsp143I GATC 6 cut(s) 24, 42, 82, 1066, 1246, 1257
Bsp19I CCATGG 1 cut(s) 1073
BspACI CCGC 4 cut(s) 5, 378, 474, 1215
BspANI GGCC 1 cut(s) 1193
BspCNI CTCAG 2 cut(s) 1054, 1221
BspDI ATCGAT 1 cut(s) 798
BspEI TCCGGA 1 cut(s) 820
BspLI GGNNCC 1 cut(s) 246
BspMAI CTGCAG 1 cut(s) 718
BspMI ACCTGC 1 cut(s) 371
BspPI GGATC 4 cut(s) 50, 90, 1074, 1241
BspQI GCTCTTC 1 cut(s) 194
BspT104I TTCGAA 1 cut(s) 865
BspT107I GGYRCC 1 cut(s) 244
BsrDI GCAATG 2 cut(s) 227, 891
BssECI CCNNGG 3 cut(s) 1062, 1073, 1283
BssMI GATC 6 cut(s) 24, 42, 82, 1066, 1246, 1257
BssNAI GTATAC 1 cut(s) 171
BssNI GRCGYC 1 cut(s) 245
BssSI CACGAG 1 cut(s) 455
BssT1I CCWWGG 2 cut(s) 1073, 1283
Bst1107I GTATAC 1 cut(s) 171
Bst2BI CACGAG 1 cut(s) 455
Bst2UI CCWGG 1 cut(s) 785
Bst4CI ACNGT 2 cut(s) 285, 622
Bst6I CTCTTC 3 cut(s) 15, 194, 867
BstACI GRCGYC 1 cut(s) 245
BstBI TTCGAA 1 cut(s) 865
BstC8I GCNNGC 1 cut(s) 395
BstDEI CTNAG 4 cut(s) 587, 1041, 1200, 1229
BstDSI CCRYGG 1 cut(s) 1073
BstF5I GGATG 5 cut(s) 190, 485, 793, 817, 829
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 1 cut(s) 247
BstKTI GATC 6 cut(s) 27, 45, 85, 1069, 1249, 1260
BstMAI GTCTC 3 cut(s) 785, 864, 1137
BstMBI GATC 6 cut(s) 24, 42, 82, 1066, 1246, 1257
BstMWI GCNNNNNNNGC 1 cut(s) 201
BstNI CCWGG 1 cut(s) 785
BstNSI RCATGY 1 cut(s) 961
BstSCI CCNGG 1 cut(s) 783
BstSFI CTRYAG 1 cut(s) 714
BstSLI GKGCMC 1 cut(s) 290
BstV1I GCAGC 1 cut(s) 545
BstV2I GAAGAC 1 cut(s) 42
BstX2I RGATCY 3 cut(s) 82, 1066, 1246
BstXI CCANNNNNNTGG 1 cut(s) 1080
BstYI RGATCY 3 cut(s) 82, 1066, 1246
BstZ17I GTATAC 1 cut(s) 171
Bsu15I ATCGAT 1 cut(s) 798
Bsu36I CCTNAGG 1 cut(s) 1229
BsuRI GGCC 1 cut(s) 1193
BsuTUI ATCGAT 1 cut(s) 798
BtgI CCRYGG 1 cut(s) 1073
BtsCI GGATG 5 cut(s) 190, 485, 793, 817, 829
BtsI GCAGTG 1 cut(s) 723
BtsIMutI CAGTG 5 cut(s) 52, 290, 294, 723, 735
BveI ACCTGC 1 cut(s) 371
Cac8I GCNNGC 1 cut(s) 395
CfoI GCGC 1 cut(s) 247
Cfr13I GGNCC 4 cut(s) 278, 375, 383, 950
ClaI ATCGAT 1 cut(s) 798
CseI GACGC 1 cut(s) 361
Csp6I GTAC 1 cut(s) 900
CviAII CATG 7 cut(s) 115, 181, 268, 958, 1074, 1080, 1097
CviQI GTAC 1 cut(s) 900
DdeI CTNAG 4 cut(s) 587, 1041, 1200, 1229
DinI GGCGCC 1 cut(s) 246
DpnI GATC 6 cut(s) 26, 44, 84, 1068, 1248, 1259
DpnII GATC 6 cut(s) 24, 42, 82, 1066, 1246, 1257
DraI TTTAAA 1 cut(s) 1209
EaeI YGGCCR 1 cut(s) 1191
Eam1104I CTCTTC 3 cut(s) 15, 194, 867
EarI CTCTTC 3 cut(s) 15, 194, 867
EciI GGCGGA 2 cut(s) 20, 463
Ecl136II GAGCTC 1 cut(s) 499
Eco130I CCWWGG 2 cut(s) 1073, 1283
Eco24I GRGCYC 1 cut(s) 501
Eco32I GATATC 1 cut(s) 310
Eco47I GGWCC 4 cut(s) 278, 375, 383, 950
Eco53kI GAGCTC 1 cut(s) 499
Eco57I CTGAAG 1 cut(s) 834
Eco81I CCTNAGG 1 cut(s) 1229
Eco88I CYCGRG 2 cut(s) 1061, 1124
EcoICRI GAGCTC 1 cut(s) 499
EcoRI GAATTC 1 cut(s) 1172
EcoRII CCWGG 1 cut(s) 783
EcoRV GATATC 1 cut(s) 310
EcoT14I CCWWGG 2 cut(s) 1073, 1283
EcoT22I ATGCAT 1 cut(s) 873
EcoT38I GRGCYC 1 cut(s) 501
EgeI GGCGCC 1 cut(s) 246
EheI GGCGCC 1 cut(s) 246
ErhI CCWWGG 2 cut(s) 1073, 1283
FaeI CATG 7 cut(s) 118, 184, 271, 961, 1077, 1083, 1100
FatI CATG 7 cut(s) 114, 180, 267, 957, 1073, 1079, 1096
FbaI TGATCA 1 cut(s) 1257
FblI GTMKAC 2 cut(s) 170, 678
Fnu4HI GCNGC 1 cut(s) 559
FokI GGATG 5 cut(s) 197, 472, 800, 804, 836
FriOI GRGCYC 1 cut(s) 501
Fsp4HI GCNGC 1 cut(s) 559
FspBI CTAG 2 cut(s) 749, 1284
GlaI GCGC 1 cut(s) 246
GluI GCNGC 1 cut(s) 559
GsuI CTGGAG 1 cut(s) 767
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 1 cut(s) 1193
HapII CCGG 2 cut(s) 56, 821
HgaI GACGC 1 cut(s) 361
HhaI GCGC 1 cut(s) 247
Hin1I GRCGYC 1 cut(s) 245
Hin1II CATG 7 cut(s) 118, 184, 271, 961, 1077, 1083, 1100
Hin6I GCGC 1 cut(s) 245
HinP1I GCGC 1 cut(s) 245
HincII GTYRAC 1 cut(s) 648
HindII GTYRAC 1 cut(s) 648
HinfI GANTC 7 cut(s) 118, 436, 451, 533, 658, 752, 1093
HpaI GTTAAC 1 cut(s) 648
HpaII CCGG 2 cut(s) 56, 821
HphI GGTGA 2 cut(s) 358, 1295
Hpy166II GTNNAC 7 cut(s) 171, 281, 618, 648, 679, 721, 980
Hpy188I TCNGA 6 cut(s) 314, 430, 445, 670, 880, 1044
Hpy8I GTNNAC 7 cut(s) 171, 281, 618, 648, 679, 721, 980
HpyAV CCTTC 3 cut(s) 477, 642, 1289
HpyCH4III ACNGT 2 cut(s) 285, 622
HpyCH4IV ACGT 5 cut(s) 102, 614, 650, 976, 1185
HpyCH4V TGCA 8 cut(s) 232, 267, 326, 417, 716, 791, 871, 884
HpyF10VI GCNNNNNNNGC 1 cut(s) 201
HpyF3I CTNAG 4 cut(s) 587, 1041, 1200, 1229
HpySE526I ACGT 5 cut(s) 102, 614, 650, 976, 1185
Hsp92I GRCGYC 1 cut(s) 245
Hsp92II CATG 7 cut(s) 118, 184, 271, 961, 1077, 1083, 1100
HspAI GCGC 1 cut(s) 245
KasI GGCGCC 1 cut(s) 244
Kpn2I TCCGGA 1 cut(s) 820
Ksp22I TGATCA 1 cut(s) 1257
KspAI GTTAAC 1 cut(s) 648
Kzo9I GATC 6 cut(s) 24, 42, 82, 1066, 1246, 1257
LguI GCTCTTC 1 cut(s) 194
LmnI GCTCC 3 cut(s) 372, 715, 997
Lsp1109I GCAGC 1 cut(s) 545
LweI GCATC 2 cut(s) 778, 871
MaeI CTAG 2 cut(s) 749, 1284
MaeII ACGT 5 cut(s) 102, 614, 650, 976, 1185
MalI GATC 6 cut(s) 26, 44, 84, 1068, 1248, 1259
MboI GATC 6 cut(s) 24, 42, 82, 1066, 1246, 1257
MflI RGATCY 3 cut(s) 82, 1066, 1246
MhlI GDGCHC 2 cut(s) 290, 501
MlsI TGGCCA 1 cut(s) 1193
MluCI AATT 4 cut(s) 15, 830, 1046, 1172
MluNI TGGCCA 1 cut(s) 1193
Mly113I GGCGCC 1 cut(s) 245
MlyI GAGTC 2 cut(s) 430, 1102
MmeI TCCRAC 2 cut(s) 410, 942
Mox20I TGGCCA 1 cut(s) 1193
Mph1103I ATGCAT 1 cut(s) 873
MroI TCCGGA 1 cut(s) 820
MscI TGGCCA 1 cut(s) 1193
MseI TTAA 5 cut(s) 219, 647, 932, 1208, 1235
MslI CAYNNNNRTG 2 cut(s) 822, 1078
Msp20I TGGCCA 1 cut(s) 1193
MspI CCGG 2 cut(s) 56, 821
MspR9I CCNGG 1 cut(s) 785
Mva1269I GAATGC 2 cut(s) 873, 1112
MvaI CCWGG 1 cut(s) 785
MwoI GCNNNNNNNGC 1 cut(s) 201
NarI GGCGCC 1 cut(s) 245
NcoI CCATGG 1 cut(s) 1073
NdeII GATC 6 cut(s) 24, 42, 82, 1066, 1246, 1257
NlaIII CATG 7 cut(s) 118, 184, 271, 961, 1077, 1083, 1100
NlaIV GGNNCC 1 cut(s) 246
NsiI ATGCAT 1 cut(s) 873
NspI RCATGY 1 cut(s) 961
NspV TTCGAA 1 cut(s) 865
PaeR7I CTCGAG 1 cut(s) 1124
PciI ACATGT 1 cut(s) 957
PciSI GCTCTTC 1 cut(s) 194
PcsI WCGNNNNNNNCGW 2 cut(s) 146, 1131
PctI GAATGC 2 cut(s) 873, 1112
PfeI GAWTC 5 cut(s) 118, 451, 533, 658, 752
PfoI TCCNGGA 1 cut(s) 783
PkrI GCNGC 1 cut(s) 560
PleI GAGTC 2 cut(s) 430, 1101
PluTI GGCGCC 1 cut(s) 248
PpsI GAGTC 2 cut(s) 430, 1101
PscI ACATGT 1 cut(s) 957
Psp124BI GAGCTC 1 cut(s) 501
Psp1406I AACGTT 1 cut(s) 614
Psp6I CCWGG 1 cut(s) 783
PspGI CCWGG 1 cut(s) 783
PspN4I GGNNCC 1 cut(s) 246
PspPI GGNCC 4 cut(s) 278, 375, 383, 950
PstI CTGCAG 1 cut(s) 718
PsuI RGATCY 3 cut(s) 82, 1066, 1246
RsaI GTAC 1 cut(s) 901
RsaNI GTAC 1 cut(s) 900
RseI CAYNNNNRTG 2 cut(s) 822, 1078
SacI GAGCTC 1 cut(s) 501
SapI GCTCTTC 1 cut(s) 194
SaqAI TTAA 5 cut(s) 219, 647, 932, 1208, 1235
SatI GCNGC 1 cut(s) 559
Sau3AI GATC 6 cut(s) 24, 42, 82, 1066, 1246, 1257
Sau96I GGNCC 4 cut(s) 278, 375, 383, 950
SchI GAGTC 2 cut(s) 430, 1102
ScrFI CCNGG 1 cut(s) 785
SduI GDGCHC 2 cut(s) 290, 501
SfaNI GCATC 2 cut(s) 778, 871
SfcI CTRYAG 1 cut(s) 714
SfoI GGCGCC 1 cut(s) 246
Sfr274I CTCGAG 1 cut(s) 1124
SfuI TTCGAA 1 cut(s) 865
SinI GGWCC 4 cut(s) 278, 375, 383, 950
SlaI CTCGAG 1 cut(s) 1124
SmiMI CAYNNNNRTG 2 cut(s) 822, 1078
SmlI CTYRAG 3 cut(s) 164, 569, 1124
SmoI CTYRAG 3 cut(s) 164, 569, 1124
Sse9I AATT 4 cut(s) 15, 830, 1046, 1172
SsiI CCGC 4 cut(s) 5, 378, 474, 1215
SspDI GGCGCC 1 cut(s) 244
SspMI CTAG 2 cut(s) 749, 1284
SstI GAGCTC 1 cut(s) 501
StyD4I CCNGG 1 cut(s) 783
StyI CCWWGG 2 cut(s) 1073, 1283
TaaI ACNGT 2 cut(s) 285, 622
TaiI ACGT 5 cut(s) 105, 617, 653, 979, 1188
TasI AATT 4 cut(s) 15, 830, 1046, 1172
TfiI GAWTC 5 cut(s) 118, 451, 533, 658, 752
Tru1I TTAA 5 cut(s) 219, 647, 932, 1208, 1235
Tru9I TTAA 5 cut(s) 219, 647, 932, 1208, 1235
TscAI CASTG 5 cut(s) 52, 290, 301, 723, 742
TseI GCWGC 1 cut(s) 558
TspDTI ATGAA 1 cut(s) 204
TspRI CASTG 5 cut(s) 52, 290, 301, 723, 742
VpaK11BI GGWCC 4 cut(s) 278, 375, 383, 950
XapI RAATTY 3 cut(s) 830, 1046, 1172
XceI RCATGY 1 cut(s) 961
XhoI CTCGAG 1 cut(s) 1124
XmaJI CCTAGG 1 cut(s) 1283
XmiI GTMKAC 2 cut(s) 170, 678
XspI CTAG 2 cut(s) 749, 1284
Zsp2I ATGCAT 1 cut(s) 873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.