LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 4 - 39 | 1.7e-08 | F-box domain |
| LRR_At1g61320_AtMIF1 | PF23622 | 75 - 380 | 3.8e-09 | At1g61320/AtMIF1, LRR domain |
| LRR_At5g56370 | PF24758 | 93 - 234 | 5.6e-12 | FBD-associated F-box protein At5g56370, LRR repeats |
| LRR_2 | PF07723 | 151 - 176 | 1.9e-06 | Leucine Rich Repeat |
| FBD | PF08387 | 343 - 387 | 1.1e-19 | FBD |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 165, 221 |
| AatII | GACGTC | 1 cut(s) | 711 |
| AccB1I | GGYRCC | 1 cut(s) | 592 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 99 |
| AccI | GTMKAC | 2 cut(s) | 890, 1172 |
| AciI | CCGC | 1 cut(s) | 258 |
| AclWI | GGATC | 1 cut(s) | 921 |
| AcoI | YGGCCR | 1 cut(s) | 75 |
| AcuI | CTGAAG | 2 cut(s) | 420, 847 |
| AcyI | GRCGYC | 1 cut(s) | 708 |
| AfaI | GTAC | 4 cut(s) | 137, 331, 677, 1221 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 99, 606 |
| AflII | CTTAAG | 1 cut(s) | 470 |
| AflIII | ACRYGT | 1 cut(s) | 748 |
| AgsI | TTSAA | 3 cut(s) | 536, 673, 1233 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 996, 1028 |
| AleI | CACNNNNGTG | 2 cut(s) | 156, 587 |
| AluBI | AGCT | 7 cut(s) | 147, 171, 313, 871, 1024, 1229, 1246 |
| AluI | AGCT | 7 cut(s) | 147, 171, 313, 871, 1024, 1229, 1246 |
| Alw26I | GTCTC | 5 cut(s) | 111, 386, 394, 449, 456 |
| AlwI | GGATC | 1 cut(s) | 921 |
| Ama87I | CYCGRG | 1 cut(s) | 1040 |
| AoxI | GGCC | 2 cut(s) | 75, 244 |
| ApeKI | GCWGC | 2 cut(s) | 1024, 1136 |
| AseI | ATTAAT | 1 cut(s) | 321 |
| AspLEI | GCGC | 1 cut(s) | 309 |
| AspS9I | GGNCC | 2 cut(s) | 4, 245 |
| AsuC2I | CCSGG | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| AvaI | CYCGRG | 1 cut(s) | 1040 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BalI | TGGCCA | 1 cut(s) | 77 |
| BanI | GGYRCC | 1 cut(s) | 592 |
| BanII | GRGCYC | 1 cut(s) | 793 |
| BbsI | GAAGAC | 1 cut(s) | 495 |
| BbvI | GCAGC | 2 cut(s) | 1011, 1123 |
| BceAI | ACGGC | 1 cut(s) | 285 |
| BciVI | GTATCC | 1 cut(s) | 1076 |
| BclI | TGATCA | 1 cut(s) | 559 |
| BcnI | CCSGG | 1 cut(s) | 60 |
| BcoDI | GTCTC | 5 cut(s) | 111, 386, 394, 449, 456 |
| BfaI | CTAG | 1 cut(s) | 1061 |
| BfmI | CTRYAG | 3 cut(s) | 261, 891, 1224 |
| BfrI | CTTAAG | 1 cut(s) | 470 |
| BfuI | GTATCC | 1 cut(s) | 1076 |
| BisI | GCNGC | 2 cut(s) | 1025, 1137 |
| BlsI | GCNGC | 2 cut(s) | 1026, 1138 |
| Bme1390I | CCNGG | 1 cut(s) | 60 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmeT110I | CYCGRG | 1 cut(s) | 1040 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 245 |
| BmiI | GGNNCC | 1 cut(s) | 594 |
| BmrFI | CCNGG | 1 cut(s) | 60 |
| BmsI | GCATC | 4 cut(s) | 241, 334, 506, 1223 |
| BoxI | GACNNNNGTC | 1 cut(s) | 711 |
| BpiI | GAAGAC | 1 cut(s) | 495 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 160, 192 |
| BpmI | CTGGAG | 1 cut(s) | 1149 |
| BpuEI | CTTGAG | 4 cut(s) | 152, 418, 747, 1187 |
| BpuMI | CCSGG | 1 cut(s) | 60 |
| Bsa29I | ATCGAT | 2 cut(s) | 646, 969 |
| BsaHI | GRCGYC | 1 cut(s) | 708 |
| BsaI | GGTCTC | 1 cut(s) | 386 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 99, 606 |
| Bse1I | ACTGG | 1 cut(s) | 160 |
| BseCI | ATCGAT | 2 cut(s) | 646, 969 |
| BseGI | GGATG | 4 cut(s) | 31, 120, 430, 583 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 99, 606 |
| BseMII | CTCAG | 4 cut(s) | 191, 723, 776, 846 |
| BseNI | ACTGG | 1 cut(s) | 160 |
| BseRI | GAGGAG | 1 cut(s) | 1113 |
| BseXI | GCAGC | 2 cut(s) | 1011, 1123 |
| BshFI | GGCC | 2 cut(s) | 77, 246 |
| BshNI | GGYRCC | 1 cut(s) | 592 |
| BshVI | ATCGAT | 2 cut(s) | 646, 969 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1040 |
| BsiSI | CCGG | 1 cut(s) | 59 |
| BslFI | GGGAC | 2 cut(s) | 240, 647 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 99, 606 |
| BsmAI | GTCTC | 5 cut(s) | 111, 386, 394, 449, 456 |
| BsmBI | CGTCTC | 1 cut(s) | 456 |
| BsmFI | GGGAC | 2 cut(s) | 240, 647 |
| BsmI | GAATGC | 1 cut(s) | 1138 |
| BsnI | GGCC | 2 cut(s) | 77, 246 |
| Bso31I | GGTCTC | 1 cut(s) | 386 |
| BsoBI | CYCGRG | 1 cut(s) | 1040 |
| Bsp1286I | GDGCHC | 1 cut(s) | 793 |
| Bsp143I | GATC | 4 cut(s) | 559, 618, 643, 913 |
| BspACI | CCGC | 1 cut(s) | 258 |
| BspANI | GGCC | 2 cut(s) | 77, 246 |
| BspCNI | CTCAG | 4 cut(s) | 190, 724, 777, 845 |
| BspDI | ATCGAT | 2 cut(s) | 646, 969 |
| BspLI | GGNNCC | 1 cut(s) | 594 |
| BspPI | GGATC | 1 cut(s) | 921 |
| BspT107I | GGYRCC | 1 cut(s) | 592 |
| BspTI | CTTAAG | 1 cut(s) | 470 |
| BspTNI | GGTCTC | 1 cut(s) | 386 |
| BsrI | ACTGG | 1 cut(s) | 160 |
| BssMI | GATC | 4 cut(s) | 559, 618, 643, 913 |
| BssNI | GRCGYC | 1 cut(s) | 708 |
| Bst4CI | ACNGT | 5 cut(s) | 8, 254, 478, 609, 895 |
| Bst6I | CTCTTC | 2 cut(s) | 507, 531 |
| BstACI | GRCGYC | 1 cut(s) | 708 |
| BstAFI | CTTAAG | 1 cut(s) | 470 |
| BstC8I | GCNNGC | 1 cut(s) | 311 |
| BstDEI | CTNAG | 6 cut(s) | 177, 568, 732, 785, 832, 1242 |
| BstF5I | GGATG | 4 cut(s) | 31, 120, 430, 583 |
| BstHHI | GCGC | 1 cut(s) | 309 |
| BstKTI | GATC | 4 cut(s) | 562, 621, 646, 916 |
| BstMAI | GTCTC | 5 cut(s) | 111, 386, 394, 449, 456 |
| BstMBI | GATC | 4 cut(s) | 559, 618, 643, 913 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 306 |
| BstNSI | RCATGY | 2 cut(s) | 730, 752 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 711 |
| BstSCI | CCNGG | 1 cut(s) | 58 |
| BstSFI | CTRYAG | 3 cut(s) | 261, 891, 1224 |
| BstV1I | GCAGC | 2 cut(s) | 1011, 1123 |
| BstV2I | GAAGAC | 1 cut(s) | 495 |
| BstX2I | RGATCY | 1 cut(s) | 913 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1017 |
| BstYI | RGATCY | 1 cut(s) | 913 |
| Bsu15I | ATCGAT | 2 cut(s) | 646, 969 |
| BsuI | GTATCC | 1 cut(s) | 1076 |
| BsuRI | GGCC | 2 cut(s) | 77, 246 |
| BsuTUI | ATCGAT | 2 cut(s) | 646, 969 |
| BtsCI | GGATG | 4 cut(s) | 31, 120, 430, 583 |
| BtsIMutI | CAGTG | 1 cut(s) | 153 |
| Cac8I | GCNNGC | 1 cut(s) | 311 |
| CfoI | GCGC | 1 cut(s) | 309 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 245 |
| ClaI | ATCGAT | 2 cut(s) | 646, 969 |
| CseI | GACGC | 3 cut(s) | 336, 503, 704 |
| Csp6I | GTAC | 4 cut(s) | 136, 330, 676, 1220 |
| CviAII | CATG | 5 cut(s) | 557, 616, 727, 749, 980 |
| CviQI | GTAC | 4 cut(s) | 136, 330, 676, 1220 |
| DdeI | CTNAG | 6 cut(s) | 177, 568, 732, 785, 832, 1242 |
| DpnI | GATC | 4 cut(s) | 561, 620, 645, 915 |
| DpnII | GATC | 4 cut(s) | 559, 618, 643, 913 |
| EaeI | YGGCCR | 1 cut(s) | 75 |
| Eam1104I | CTCTTC | 2 cut(s) | 507, 531 |
| EarI | CTCTTC | 2 cut(s) | 507, 531 |
| Eco24I | GRGCYC | 1 cut(s) | 793 |
| Eco31I | GGTCTC | 1 cut(s) | 386 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco57I | CTGAAG | 2 cut(s) | 420, 847 |
| Eco88I | CYCGRG | 1 cut(s) | 1040 |
| EcoT38I | GRGCYC | 1 cut(s) | 793 |
| Esp3I | CGTCTC | 1 cut(s) | 456 |
| FaeI | CATG | 5 cut(s) | 560, 619, 730, 752, 983 |
| FaqI | GGGAC | 2 cut(s) | 240, 647 |
| FatI | CATG | 5 cut(s) | 556, 615, 726, 748, 979 |
| FauI | CCCGC | 1 cut(s) | 265 |
| FauNDI | CATATG | 2 cut(s) | 1120, 1197 |
| FbaI | TGATCA | 1 cut(s) | 559 |
| FblI | GTMKAC | 2 cut(s) | 890, 1172 |
| Fnu4HI | GCNGC | 2 cut(s) | 1025, 1137 |
| FokI | GGATG | 4 cut(s) | 38, 127, 437, 590 |
| FriOI | GRGCYC | 1 cut(s) | 793 |
| Fsp4HI | GCNGC | 2 cut(s) | 1025, 1137 |
| FspBI | CTAG | 1 cut(s) | 1061 |
| GlaI | GCGC | 1 cut(s) | 308 |
| GluI | GCNGC | 2 cut(s) | 1025, 1137 |
| GsuI | CTGGAG | 1 cut(s) | 1149 |
| HaeIII | GGCC | 2 cut(s) | 77, 246 |
| HapII | CCGG | 1 cut(s) | 59 |
| HgaI | GACGC | 3 cut(s) | 336, 503, 704 |
| HhaI | GCGC | 1 cut(s) | 309 |
| Hin1I | GRCGYC | 1 cut(s) | 708 |
| Hin1II | CATG | 5 cut(s) | 560, 619, 730, 752, 983 |
| Hin6I | GCGC | 1 cut(s) | 307 |
| HinP1I | GCGC | 1 cut(s) | 307 |
| HincII | GTYRAC | 2 cut(s) | 17, 754 |
| HindII | GTYRAC | 2 cut(s) | 17, 754 |
| HindIII | AAGCTT | 1 cut(s) | 1244 |
| HinfI | GANTC | 5 cut(s) | 238, 402, 938, 983, 1169 |
| HpaII | CCGG | 1 cut(s) | 59 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy166II | GTNNAC | 6 cut(s) | 17, 187, 703, 754, 891, 1173 |
| Hpy188I | TCNGA | 8 cut(s) | 25, 127, 237, 382, 786, 806, 835, 882 |
| Hpy188III | TCNNGA | 5 cut(s) | 533, 563, 1040, 1061, 1166 |
| Hpy8I | GTNNAC | 6 cut(s) | 17, 187, 703, 754, 891, 1173 |
| Hpy99I | CGWCG | 3 cut(s) | 497, 609, 710 |
| HpyAV | CCTTC | 4 cut(s) | 441, 606, 675, 858 |
| HpyCH4III | ACNGT | 5 cut(s) | 8, 254, 478, 609, 895 |
| HpyCH4IV | ACGT | 1 cut(s) | 708 |
| HpyCH4V | TGCA | 3 cut(s) | 40, 212, 232 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 306 |
| HpyF3I | CTNAG | 6 cut(s) | 177, 568, 732, 785, 832, 1242 |
| HpySE526I | ACGT | 1 cut(s) | 708 |
| Hsp92I | GRCGYC | 1 cut(s) | 708 |
| Hsp92II | CATG | 5 cut(s) | 560, 619, 730, 752, 983 |
| HspAI | GCGC | 1 cut(s) | 307 |
| Ksp22I | TGATCA | 1 cut(s) | 559 |
| Kzo9I | GATC | 4 cut(s) | 559, 618, 643, 913 |
| LmnI | GCTCC | 2 cut(s) | 550, 936 |
| LpnPI | CCDG | 9 cut(s) | 72, 141, 175, 228, 261, 323, 744, 837, 1179 |
| Lsp1109I | GCAGC | 2 cut(s) | 1011, 1123 |
| LweI | GCATC | 4 cut(s) | 241, 334, 506, 1223 |
| MaeI | CTAG | 1 cut(s) | 1061 |
| MaeII | ACGT | 1 cut(s) | 708 |
| MaeIII | GTNAC | 2 cut(s) | 580, 769 |
| MalI | GATC | 4 cut(s) | 561, 620, 645, 915 |
| MboI | GATC | 4 cut(s) | 559, 618, 643, 913 |
| MboII | GAAGA | 7 cut(s) | 327, 426, 494, 500, 548, 853, 908 |
| MfeI | CAATTG | 1 cut(s) | 1011 |
| MflI | RGATCY | 1 cut(s) | 913 |
| MhlI | GDGCHC | 1 cut(s) | 793 |
| MlsI | TGGCCA | 1 cut(s) | 77 |
| MluCI | AATT | 5 cut(s) | 318, 409, 628, 717, 1011 |
| MluNI | TGGCCA | 1 cut(s) | 77 |
| MlyI | GAGTC | 3 cut(s) | 396, 992, 1178 |
| MmeI | TCCRAC | 3 cut(s) | 363, 829, 998 |
| MnlI | CCTC | 9 cut(s) | 388, 736, 780, 829, 1057, 1086, 1091, 1102, 1140 |
| Mox20I | TGGCCA | 1 cut(s) | 77 |
| MscI | TGGCCA | 1 cut(s) | 77 |
| MseI | TTAA | 4 cut(s) | 321, 471, 681, 900 |
| MslI | CAYNNNNRTG | 3 cut(s) | 156, 587, 1072 |
| Msp20I | TGGCCA | 1 cut(s) | 77 |
| MspA1I | CMGCKG | 1 cut(s) | 313 |
| MspCI | CTTAAG | 1 cut(s) | 470 |
| MspI | CCGG | 1 cut(s) | 59 |
| MspR9I | CCNGG | 1 cut(s) | 60 |
| MunI | CAATTG | 1 cut(s) | 1011 |
| Mva1269I | GAATGC | 1 cut(s) | 1138 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 306 |
| NciI | CCSGG | 1 cut(s) | 60 |
| NdeI | CATATG | 2 cut(s) | 1120, 1197 |
| NdeII | GATC | 4 cut(s) | 559, 618, 643, 913 |
| NlaIII | CATG | 5 cut(s) | 560, 619, 730, 752, 983 |
| NlaIV | GGNNCC | 1 cut(s) | 594 |
| NmeAIII | GCCGAG | 2 cut(s) | 387, 1053 |
| NmuCI | GTSAC | 1 cut(s) | 580 |
| NspI | RCATGY | 2 cut(s) | 730, 752 |
| OliI | CACNNNNGTG | 2 cut(s) | 156, 587 |
| PciI | ACATGT | 1 cut(s) | 748 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 702 |
| PctI | GAATGC | 1 cut(s) | 1138 |
| PfeI | GAWTC | 2 cut(s) | 238, 938 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 99 |
| PfoI | TCCNGGA | 1 cut(s) | 58 |
| PkrI | GCNGC | 2 cut(s) | 1026, 1138 |
| PleI | GAGTC | 3 cut(s) | 396, 991, 1177 |
| PpsI | GAGTC | 3 cut(s) | 396, 991, 1177 |
| PscI | ACATGT | 1 cut(s) | 748 |
| PshAI | GACNNNNGTC | 1 cut(s) | 711 |
| PshBI | ATTAAT | 1 cut(s) | 321 |
| PsiI | TTATAA | 2 cut(s) | 165, 221 |
| PspN4I | GGNNCC | 1 cut(s) | 594 |
| PspPI | GGNCC | 2 cut(s) | 4, 245 |
| PsuI | RGATCY | 1 cut(s) | 913 |
| PvuII | CAGCTG | 1 cut(s) | 313 |
| RsaI | GTAC | 4 cut(s) | 137, 331, 677, 1221 |
| RsaNI | GTAC | 4 cut(s) | 136, 330, 676, 1220 |
| RseI | CAYNNNNRTG | 3 cut(s) | 156, 587, 1072 |
| SaqAI | TTAA | 4 cut(s) | 321, 471, 681, 900 |
| SatI | GCNGC | 2 cut(s) | 1025, 1137 |
| Sau3AI | GATC | 4 cut(s) | 559, 618, 643, 913 |
| Sau96I | GGNCC | 2 cut(s) | 4, 245 |
| SchI | GAGTC | 3 cut(s) | 396, 992, 1178 |
| ScrFI | CCNGG | 1 cut(s) | 60 |
| SduI | GDGCHC | 1 cut(s) | 793 |
| SfaNI | GCATC | 4 cut(s) | 241, 334, 506, 1223 |
| SfcI | CTRYAG | 3 cut(s) | 261, 891, 1224 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 156, 587, 1072 |
| SmlI | CTYRAG | 5 cut(s) | 131, 397, 470, 762, 1202 |
| SmoI | CTYRAG | 5 cut(s) | 131, 397, 470, 762, 1202 |
| Sse9I | AATT | 5 cut(s) | 318, 409, 628, 717, 1011 |
| SsiI | CCGC | 1 cut(s) | 258 |
| SspI | AATATT | 2 cut(s) | 45, 325 |
| SspMI | CTAG | 1 cut(s) | 1061 |
| StyD4I | CCNGG | 1 cut(s) | 58 |
| TaaI | ACNGT | 5 cut(s) | 8, 254, 478, 609, 895 |
| TaiI | ACGT | 1 cut(s) | 711 |
| TaqI | TCGA | 5 cut(s) | 621, 646, 741, 969, 1254 |
| TasI | AATT | 5 cut(s) | 318, 409, 628, 717, 1011 |
| TfiI | GAWTC | 2 cut(s) | 238, 938 |
| Tru1I | TTAA | 4 cut(s) | 321, 471, 681, 900 |
| Tru9I | TTAA | 4 cut(s) | 321, 471, 681, 900 |
| TscAI | CASTG | 1 cut(s) | 160 |
| TseFI | GTSAC | 1 cut(s) | 580 |
| TseI | GCWGC | 2 cut(s) | 1024, 1136 |
| Tsp45I | GTSAC | 1 cut(s) | 580 |
| TspDTI | ATGAA | 1 cut(s) | 866 |
| TspGWI | ACGGA | 1 cut(s) | 701 |
| TspRI | CASTG | 1 cut(s) | 160 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 99 |
| Vha464I | CTTAAG | 1 cut(s) | 470 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| VspI | ATTAAT | 1 cut(s) | 321 |
| XbaI | TCTAGA | 1 cut(s) | 1060 |
| XceI | RCATGY | 2 cut(s) | 730, 752 |
| XmiI | GTMKAC | 2 cut(s) | 890, 1172 |
| XspI | CTAG | 1 cut(s) | 1061 |
| ZraI | GACGTC | 1 cut(s) | 709 |