AT5G56440

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000140
Physical Location & Seq
Reverse (-)
22855742 .. 22857117
1376 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G56440.1

Sequence Viewer

Length: 1293 bp
ATGGATAGGATCAGTTTGTTGCCAGATGATGTAGTTTTTAAGATATTGTCATTCGTTCCAACCAAAGTTGTTGTATCCACTAACCTTTTGTCCAAGCGATGGCGTTATCTCTGGAAGCATGTGCCAAAGCTTGATTATCGTGATCCATCTCTTGTTGACACTGAGCATTGGAGAGCTTCACGATTTGTTGACAAGTTTTTGCTACTTCACGAAGCTCCAGTCTTGGAAACTCTGCATCTCTCACTTAGTCGAAATTGTCCTCCTTCAGATATTGAAACATGGATTAGTGTTGCGATTTCTCGTCGAGTGCGCAATCTTCATATTTACCGGTACATACCCAGTACAGGGCCCATACGGTTGCCTAGGAGCCTGTATACATGTGAAACCCTTGTGTCCTTATACCTCCTACTAGATTTCACTGTGGATGATGCTCCTTTCATGTTTTGTTTCCGGTCACTCAAGGTTCTGGTCCTTTTATTTGCGAAATTCTCAAGTGATGAGATTGTTAATAGACTTTTATCCGGTTGCCCTGTCCTTGAAGGACTGATATTGATTCGTCGAAATGACAACGTGAAAAATTTCACAATCGCGGCTCCTTCATTGCAGAGATTAATAGCCATAGACTGTCGCTCTCAAGTTCCTGGAGATGATGTTGGGTTTGTGATCAAAGCTCCGTCTTTAAAGTCGTTGACGTTGTTGAACTTTTCTCCCCATAGTGGGTTCCGTTCTTTAGTAAAAATGCCAGACCTCGTGAAGGCTTCTATCAAGGTTCGACATGGTGATTCTAAGATGTTTATGGGTTGTCTTACCTCAACCAAACGCCTTGCCTTATGTCTACAACCACCACTGGATTCATGTCCTATAGGCGTCTTCAATCAGCTAGTGTCTCTAAGTCTTTGTACATGCTCTTTAGGTTGGTGTCGTCTTATACTCAACCATACACCTAAACTCCGAGTTCTCAGATTCGAACAAAGACAAGCAAAATTTTATCAATTGCTAGATCCTCTTAAGAGATGTTGCAGCAGTTCCGTAGATGTTCAAACTCAATGGGAGCAGCCGAGTTCTGTTCCTAAGTGTTTGATTTCGAGTCTTGAAACTGTTGAGTGGATTGATTACAAAGGAAGAGAAGTAGAGAAAAAAGTGGTGATGTATTTGCTAGAAAACTCTCGACAGCTTAAGACAATGGCTATTAGATCCCTGAAATCGACCAATGATAACGAGAAACTCAAGATGCTGCAAGAGCTATCGTCCATACACAGGATTTGTACTAAATGTGGGCTTTCCTTCACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD LRR_2

Protein Analysis

430

Amino Acids

49.21

Weight (kDa)

9.4

Isoelectric Point (pI)

48.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 43 1.1e-06 F-box domain
LRR_At5g56370 PF24758 92 - 246 7.8e-18 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 152 - 177 8.6e-06 Leucine Rich Repeat
FBD PF08387 352 - 397 4.4e-21 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05080 AT1G19410 AT1G22000 AT1G26815 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G32375 AT1G32375 AT1G50980 AT1G51055 AT1G55030 AT1G55030 AT1G55660 AT1G55660 AT2G04230 AT2G26860 AT2G26860 AT3G10750 AT3G26920 AT3G26920 AT3G26920 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26930 AT3G26930 AT3G49020 AT3G49030 AT3G49030 AT3G49040 AT3G49045 AT3G49480 AT3G49480 AT3G50710 AT3G51530 AT3G52680 AT3G52680 AT3G52690 AT3G53550 AT3G54910 AT3G54910 AT3G54910 AT3G55670 AT4G00160 AT4G00315 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G10400 AT4G10400 AT4G10400 AT4G10410 AT4G10420 AT4G13965 AT4G15060 AT4G15060 AT4G15075 AT4G26340 AT4G26350 AT5G11370 AT5G38565 AT5G38570 AT5G38580 AT5G38590 AT5G38590 AT5G38590 AT5G38590 AT5G40750 AT5G44850 AT5G50270 AT5G50270 AT5G52460 AT5G52460 AT5G56325 AT5G56370 AT5G56370 AT5G56370 AT5G56380 AT5G56380 AT5G56390 AT5G56400 AT5G56410 AT5G56420 AT5G56420 AT5G56420 AT5G56430 AT5G56440 AT5G56452 AT5G56452 AT5G56555 AT5G56560 AT5G56560 AT5G56570 AT5G56690 AT5G56700 AT5G56700 AT5G56800 AT5G56810 AT5G56810 AT5G56820 AT5G60610 AT5G60610 AT5G62970
malus_domestica MD10G1316000.v1.1
prunus_persica Prupe.4G024600_v2.0.a1
pyrus_communis pycom10g26820
rosa_chinensis RchiOBHm_Chr1g0383101 RchiOBHm_Chr5g0003811 RchiOBHm_Chr5g0069761 RchiOBHm_Chr5g0069771 RchiOBHm_Chr5g0069781 RchiOBHm_Chr5g0069791 RchiOBHm_Chr5g0069821 RchiOBHm_Chr5g0069831
rosa_laevigata RLG00000026130 RLG00000026375 RLG00000031193 RLG00000036088 RLG00000036089 RLG00000036090 RLG00000036095 RLG00000036096 RLG00000036097 RLG00000036099 RLG00000036100
rosa_multiflora Rmu_co8192842.1_g000001 Rmu_co8209784.1_g000001 Rmu_sc0000726.1_g000001 Rmu_sc0000726.1_g000003 Rmu_sc0000726.1_g000007 Rmu_sc0000726.1_g000008 Rmu_sc0000738.1_g000009 Rmu_sc0000738.1_g000010 Rmu_sc0000738.1_g000011 Rmu_sc0000738.1_g000015 Rmu_sc0000738.1_g000018 Rmu_sc0000738.1_g000019 Rmu_sc0004212.1_g000009 Rmu_sc0017283.1_g000003 Rmu_sc0024481.1_g000001
rosa_roxburghii Rroxscaffold_1G00011240 Rroxscaffold_1G00011270 Rroxscaffold_1G00011280 Rroxscaffold_1G00011300 Rroxscaffold_1G00011310 Rroxscaffold_1G00011320 Rroxscaffold_4G00277590
rosa_rugosa Rorug01G0413100 Rorug01G0438500 Rorug01G0438600 Rorug04G0406800 Rorug05G0399300 Rorug05G0399400 Rorug05G0399500 Rorug05G0399600 Rorug05G0399700 Rorug05G0399900.1 Rorug05G0400000 Rorug05G0400100
rosa_samantha Rh1AG436100 Rh1AG464200 Rh1BG421500 Rh1CG434900 Rh1DG454100 Rh5AG034000 Rh5AG034100 Rh5AG456400 Rh5AG456500 Rh5AG456600 Rh5AG456800 Rh5AG457000 Rh5BG032600 Rh5BG475500 Rh5BG475600 Rh5BG475800 Rh5BG475900 Rh5CG036600 Rh5CG036700 Rh5CG499100 Rh5CG499200 Rh5CG499400 Rh5CG499600 Rh5DG032800 Rh5DG487000 Rh5DG487100 Rh5DG487200 Rh5DG487400 Rh5DG487500
rosa_wichuraiana Rw5G003130 Rw5G042610 Rw5G042630 Rw5G042650 Rw5G042660 Rw5G042670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 311
AccB7I CCANNNNNTGG 1 cut(s) 99
AccI GTMKAC 2 cut(s) 374, 835
AccII CGCG 1 cut(s) 590
AciI CCGC 1 cut(s) 590
AclWI GGATC 4 cut(s) 17, 137, 995, 1188
AcsI RAATTY 3 cut(s) 485, 577, 983
AcuI CTGAAG 1 cut(s) 249
AcyI GRCGYC 1 cut(s) 867
AfaI GTAC 4 cut(s) 332, 343, 901, 1267
AfiI CCNNNNNNNGG 7 cut(s) 99, 344, 345, 716, 717, 754, 1257
AflII CTTAAG 2 cut(s) 1007, 1175
AflIII ACRYGT 1 cut(s) 377
AgeI ACCGGT 1 cut(s) 327
AgsI TTSAA 6 cut(s) 275, 539, 700, 874, 1040, 1094
AjnI CCWGG 1 cut(s) 640
AluBI AGCT 7 cut(s) 130, 176, 215, 671, 880, 1174, 1243
AluI AGCT 7 cut(s) 130, 176, 215, 671, 880, 1174, 1243
Alw26I GTCTC 1 cut(s) 891
AlwI GGATC 4 cut(s) 17, 137, 995, 1188
AoxI GGCC 1 cut(s) 347
ApaI GGGCCC 1 cut(s) 351
ApeKI GCWGC 3 cut(s) 1020, 1054, 1234
ApoI RAATTY 3 cut(s) 485, 577, 983
ArsI GACNNNNNNTTYG 2 cut(s) 204, 236
AseI ATTAAT 1 cut(s) 611
AsiGI ACCGGT 1 cut(s) 327
Asp700I GAANNNNTTC 1 cut(s) 578
AspA2I CCTAGG 1 cut(s) 362
AspLEI GCGC 1 cut(s) 312
AspS9I GGNCC 3 cut(s) 347, 348, 469
AsuHPI GGTGA 3 cut(s) 791, 1156, 1279
AsuII TTCGAA 1 cut(s) 966
AvaII GGWCC 1 cut(s) 469
AvrII CCTAGG 1 cut(s) 362
BaeGI GKGCMC 1 cut(s) 351
BanII GRGCYC 1 cut(s) 351
BauI CACGAG 1 cut(s) 749
BbsI GAAGAC 1 cut(s) 862
BbvI GCAGC 3 cut(s) 1032, 1066, 1221
BccI CCATC 2 cut(s) 93, 154
BciT130I CCWGG 1 cut(s) 642
BciVI GTATCC 1 cut(s) 85
BclI TGATCA 1 cut(s) 663
BcoDI GTCTC 1 cut(s) 891
BfaI CTAG 5 cut(s) 363, 410, 881, 998, 1157
BfmI CTRYAG 1 cut(s) 861
BfrI CTTAAG 2 cut(s) 1007, 1175
BfuI GTATCC 1 cut(s) 85
BisI GCNGC 4 cut(s) 591, 1021, 1055, 1235
BlnI CCTAGG 1 cut(s) 362
BlsI GCNGC 4 cut(s) 592, 1022, 1056, 1236
Bme1390I CCNGG 1 cut(s) 642
Bme18I GGWCC 1 cut(s) 469
BmgT120I GGNCC 3 cut(s) 347, 348, 469
BmiI GGNNCC 4 cut(s) 349, 368, 594, 722
BmrFI CCNGG 1 cut(s) 642
BmrI ACTGGG 1 cut(s) 333
BmsI GCATC 3 cut(s) 244, 418, 1221
BmuI ACTGGG 1 cut(s) 333
BpiI GAAGAC 1 cut(s) 862
BpmI CTGGAG 2 cut(s) 201, 663
Bpu14I TTCGAA 1 cut(s) 966
BpuEI CTTGAG 4 cut(s) 443, 475, 618, 1211
BsaHI GRCGYC 1 cut(s) 867
BsaJI CCNNGG 1 cut(s) 362
BsaWI WCCGGW 3 cut(s) 327, 450, 521
BsaXI ACNNNNNCTCC 4 cut(s) 636, 666, 933, 963
Bsc4I CCNNNNNNNGG 7 cut(s) 99, 344, 345, 716, 717, 754, 1257
Bse118I RCCGGY 1 cut(s) 327
Bse1I ACTGG 3 cut(s) 218, 339, 852
Bse3DI GCAATG 1 cut(s) 599
BseBI CCWGG 1 cut(s) 642
BseDI CCNNGG 1 cut(s) 362
BseGI GGATG 1 cut(s) 430
BseLI CCNNNNNNNGG 7 cut(s) 99, 344, 345, 716, 717, 754, 1257
BseMI GCAATG 1 cut(s) 599
BseMII CTCAG 2 cut(s) 153, 973
BseNI ACTGG 3 cut(s) 218, 339, 852
BseSI GKGCMC 1 cut(s) 351
BseXI GCAGC 3 cut(s) 1032, 1066, 1221
Bsh1236I CGCG 1 cut(s) 590
BshFI GGCC 1 cut(s) 349
BshTI ACCGGT 1 cut(s) 327
BsiSI CCGG 3 cut(s) 328, 451, 522
BslI CCNNNNNNNGG 7 cut(s) 99, 344, 345, 716, 717, 754, 1257
BsmAI GTCTC 1 cut(s) 891
BsnI GGCC 1 cut(s) 349
Bsp119I TTCGAA 1 cut(s) 966
Bsp120I GGGCCC 1 cut(s) 347
Bsp1286I GDGCHC 1 cut(s) 351
Bsp1407I TGTACA 1 cut(s) 899
Bsp143I GATC 5 cut(s) 9, 142, 663, 1000, 1193
BspACI CCGC 1 cut(s) 590
BspANI GGCC 1 cut(s) 349
BspCNI CTCAG 2 cut(s) 154, 972
BspFNI CGCG 1 cut(s) 590
BspLI GGNNCC 4 cut(s) 349, 368, 594, 722
BspPI GGATC 4 cut(s) 17, 137, 995, 1188
BspT104I TTCGAA 1 cut(s) 966
BspTI CTTAAG 2 cut(s) 1007, 1175
BsrDI GCAATG 1 cut(s) 599
BsrFI RCCGGY 1 cut(s) 327
BsrGI TGTACA 1 cut(s) 899
BsrI ACTGG 3 cut(s) 218, 339, 852
BssAI RCCGGY 1 cut(s) 327
BssECI CCNNGG 1 cut(s) 362
BssMI GATC 5 cut(s) 9, 142, 663, 1000, 1193
BssNAI GTATAC 1 cut(s) 375
BssNI GRCGYC 1 cut(s) 867
BssSI CACGAG 1 cut(s) 749
BssT1I CCWWGG 1 cut(s) 362
Bst1107I GTATAC 1 cut(s) 375
Bst2BI CACGAG 1 cut(s) 749
Bst2UI CCWGG 1 cut(s) 642
Bst4CI ACNGT 4 cut(s) 357, 421, 626, 1099
Bst6I CTCTTC 1 cut(s) 1117
BstACI GRCGYC 1 cut(s) 867
BstAFI CTTAAG 2 cut(s) 1007, 1175
BstAUI TGTACA 1 cut(s) 899
BstBI TTCGAA 1 cut(s) 966
BstDEI CTNAG 6 cut(s) 162, 245, 786, 890, 959, 1071
BstENI CCTNNNNNAGG 1 cut(s) 752
BstF5I GGATG 1 cut(s) 430
BstFNI CGCG 1 cut(s) 590
BstHHI GCGC 1 cut(s) 312
BstKTI GATC 5 cut(s) 12, 145, 666, 1003, 1196
BstMAI GTCTC 1 cut(s) 891
BstMBI GATC 5 cut(s) 9, 142, 663, 1000, 1193
BstMWI GCNNNNNNNGC 1 cut(s) 1240
BstNI CCWGG 1 cut(s) 642
BstNSI RCATGY 3 cut(s) 122, 381, 906
BstSCI CCNGG 1 cut(s) 640
BstSFI CTRYAG 1 cut(s) 861
BstSLI GKGCMC 1 cut(s) 351
BstUI CGCG 1 cut(s) 590
BstV1I GCAGC 3 cut(s) 1032, 1066, 1221
BstV2I GAAGAC 1 cut(s) 862
BstX2I RGATCY 2 cut(s) 1000, 1193
BstYI RGATCY 2 cut(s) 1000, 1193
BstZ17I GTATAC 1 cut(s) 375
BsuI GTATCC 1 cut(s) 85
BsuRI GGCC 1 cut(s) 349
BtgZI GCGATG 1 cut(s) 112
BtsCI GGATG 1 cut(s) 430
BtsIMutI CAGTG 3 cut(s) 159, 417, 845
CfoI GCGC 1 cut(s) 312
Cfr10I RCCGGY 1 cut(s) 327
Cfr13I GGNCC 3 cut(s) 347, 348, 469
CseI GACGC 1 cut(s) 856
Csp6I GTAC 4 cut(s) 331, 342, 900, 1266
CspAI ACCGGT 1 cut(s) 327
CviAII CATG 7 cut(s) 119, 279, 378, 439, 776, 855, 903
CviQI GTAC 4 cut(s) 331, 342, 900, 1266
DdeI CTNAG 6 cut(s) 162, 245, 786, 890, 959, 1071
DpnI GATC 5 cut(s) 11, 144, 665, 1002, 1195
DpnII GATC 5 cut(s) 9, 142, 663, 1000, 1193
DraI TTTAAA 1 cut(s) 681
Eam1104I CTCTTC 1 cut(s) 1117
EarI CTCTTC 1 cut(s) 1117
Eco130I CCWWGG 1 cut(s) 362
Eco24I GRGCYC 1 cut(s) 351
Eco47I GGWCC 1 cut(s) 469
Eco57I CTGAAG 1 cut(s) 249
EcoNI CCTNNNNNAGG 1 cut(s) 752
EcoO109I RGGNCCY 1 cut(s) 347
EcoRII CCWGG 1 cut(s) 640
EcoT14I CCWWGG 1 cut(s) 362
EcoT38I GRGCYC 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 362
FaeI CATG 7 cut(s) 122, 282, 381, 442, 779, 858, 906
FatI CATG 7 cut(s) 118, 278, 377, 438, 775, 854, 902
FbaI TGATCA 1 cut(s) 663
FblI GTMKAC 2 cut(s) 374, 835
Fnu4HI GCNGC 4 cut(s) 591, 1021, 1055, 1235
FokI GGATG 1 cut(s) 437
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 4 cut(s) 591, 1021, 1055, 1235
FspBI CTAG 5 cut(s) 363, 410, 881, 998, 1157
FspI TGCGCA 1 cut(s) 311
GlaI GCGC 1 cut(s) 311
GluI GCNGC 4 cut(s) 591, 1021, 1055, 1235
GsuI CTGGAG 2 cut(s) 201, 663
HaeIII GGCC 1 cut(s) 349
HapII CCGG 3 cut(s) 328, 451, 522
HgaI GACGC 1 cut(s) 856
HhaI GCGC 1 cut(s) 312
Hin1I GRCGYC 1 cut(s) 867
Hin1II CATG 7 cut(s) 122, 282, 381, 442, 779, 858, 906
Hin6I GCGC 1 cut(s) 310
HinP1I GCGC 1 cut(s) 310
HincII GTYRAC 3 cut(s) 157, 190, 690
HindII GTYRAC 3 cut(s) 157, 190, 690
HindIII AAGCTT 1 cut(s) 128
HinfI GANTC 5 cut(s) 553, 782, 851, 963, 1087
HpaII CCGG 3 cut(s) 328, 451, 522
HphI GGTGA 3 cut(s) 791, 1156, 1279
Hpy166II GTNNAC 5 cut(s) 157, 190, 375, 690, 836
Hpy188I TCNGA 3 cut(s) 268, 953, 962
Hpy188III TCNNGA 8 cut(s) 112, 140, 180, 209, 751, 1091, 1167, 1228
Hpy8I GTNNAC 5 cut(s) 157, 190, 375, 690, 836
Hpy99I CGWCG 2 cut(s) 306, 561
HpyAV CCTTC 4 cut(s) 273, 533, 606, 748
HpyCH4III ACNGT 4 cut(s) 357, 421, 626, 1099
HpyCH4IV ACGT 2 cut(s) 570, 692
HpyCH4V TGCA 4 cut(s) 235, 604, 1020, 1237
HpyF10VI GCNNNNNNNGC 1 cut(s) 1240
HpyF3I CTNAG 6 cut(s) 162, 245, 786, 890, 959, 1071
HpySE526I ACGT 2 cut(s) 570, 692
Hsp92I GRCGYC 1 cut(s) 867
Hsp92II CATG 7 cut(s) 122, 282, 381, 442, 779, 858, 906
HspAI GCGC 1 cut(s) 310
Ksp22I TGATCA 1 cut(s) 663
Kzo9I GATC 5 cut(s) 9, 142, 663, 1000, 1193
LmnI GCTCC 6 cut(s) 220, 366, 436, 598, 676, 1051
Lsp1109I GCAGC 3 cut(s) 1032, 1066, 1221
LweI GCATC 3 cut(s) 244, 418, 1221
MaeI CTAG 5 cut(s) 363, 410, 881, 998, 1157
MaeII ACGT 2 cut(s) 570, 692
MaeIII GTNAC 1 cut(s) 453
MalI GATC 5 cut(s) 11, 144, 665, 1002, 1195
MboI GATC 5 cut(s) 9, 142, 663, 1000, 1193
MboII GAAGA 3 cut(s) 308, 862, 1134
MfeI CAATTG 1 cut(s) 992
MflI RGATCY 2 cut(s) 1000, 1193
MhlI GDGCHC 1 cut(s) 351
MluCI AATT 5 cut(s) 253, 485, 577, 983, 992
MlyI GAGTC 1 cut(s) 1096
MmeI TCCRAC 1 cut(s) 83
MnlI CCTC 5 cut(s) 270, 413, 758, 820, 1014
MroXI GAANNNNTTC 1 cut(s) 578
MseI TTAA 6 cut(s) 39, 507, 611, 680, 1008, 1176
MspCI CTTAAG 2 cut(s) 1007, 1175
MspI CCGG 3 cut(s) 328, 451, 522
MspR9I CCNGG 1 cut(s) 642
MunI CAATTG 1 cut(s) 992
MvaI CCWGG 1 cut(s) 642
MvnI CGCG 1 cut(s) 590
MwoI GCNNNNNNNGC 1 cut(s) 1240
NdeII GATC 5 cut(s) 9, 142, 663, 1000, 1193
NlaIII CATG 7 cut(s) 122, 282, 381, 442, 779, 858, 906
NlaIV GGNNCC 4 cut(s) 349, 368, 594, 722
NmeAIII GCCGAG 1 cut(s) 1083
NmuCI GTSAC 1 cut(s) 453
NsbI TGCGCA 1 cut(s) 311
NspI RCATGY 3 cut(s) 122, 381, 906
NspV TTCGAA 1 cut(s) 966
PciI ACATGT 1 cut(s) 377
PdmI GAANNNNTTC 1 cut(s) 578
PfeI GAWTC 4 cut(s) 553, 782, 851, 963
PflMI CCANNNNNTGG 1 cut(s) 99
PfoI TCCNGGA 1 cut(s) 640
PinAI ACCGGT 1 cut(s) 327
PkrI GCNGC 4 cut(s) 592, 1022, 1056, 1236
PleI GAGTC 1 cut(s) 1095
PpsI GAGTC 1 cut(s) 1095
PscI ACATGT 1 cut(s) 377
PshBI ATTAAT 1 cut(s) 611
Psp6I CCWGG 1 cut(s) 640
PspGI CCWGG 1 cut(s) 640
PspN4I GGNNCC 4 cut(s) 349, 368, 594, 722
PspOMI GGGCCC 1 cut(s) 347
PspPI GGNCC 3 cut(s) 347, 348, 469
PsuI RGATCY 2 cut(s) 1000, 1193
RsaI GTAC 4 cut(s) 332, 343, 901, 1267
RsaNI GTAC 4 cut(s) 331, 342, 900, 1266
SaqAI TTAA 6 cut(s) 39, 507, 611, 680, 1008, 1176
SatI GCNGC 4 cut(s) 591, 1021, 1055, 1235
Sau3AI GATC 5 cut(s) 9, 142, 663, 1000, 1193
Sau96I GGNCC 3 cut(s) 347, 348, 469
SchI GAGTC 1 cut(s) 1096
ScrFI CCNGG 1 cut(s) 642
SduI GDGCHC 1 cut(s) 351
SfaNI GCATC 3 cut(s) 244, 418, 1221
SfcI CTRYAG 1 cut(s) 861
SfuI TTCGAA 1 cut(s) 966
SinI GGWCC 1 cut(s) 469
SmlI CTYRAG 6 cut(s) 458, 490, 633, 1007, 1175, 1226
SmoI CTYRAG 6 cut(s) 458, 490, 633, 1007, 1175, 1226
Sse9I AATT 5 cut(s) 253, 485, 577, 983, 992
SsiI CCGC 1 cut(s) 590
SspMI CTAG 5 cut(s) 363, 410, 881, 998, 1157
StyD4I CCNGG 1 cut(s) 640
StyI CCWWGG 1 cut(s) 362
TaaI ACNGT 4 cut(s) 357, 421, 626, 1099
TaiI ACGT 2 cut(s) 573, 695
TaqI TCGA 8 cut(s) 250, 304, 559, 772, 966, 1085, 1168, 1205
TasI AATT 5 cut(s) 253, 485, 577, 983, 992
TatI WGTACW 3 cut(s) 341, 899, 1265
TauI GCSGC 1 cut(s) 593
TfiI GAWTC 4 cut(s) 553, 782, 851, 963
Tru1I TTAA 6 cut(s) 39, 507, 611, 680, 1008, 1176
Tru9I TTAA 6 cut(s) 39, 507, 611, 680, 1008, 1176
TscAI CASTG 3 cut(s) 166, 424, 852
TseFI GTSAC 1 cut(s) 453
TseI GCWGC 3 cut(s) 1020, 1054, 1234
Tsp45I GTSAC 1 cut(s) 453
TspDTI ATGAA 4 cut(s) 308, 427, 588, 843
TspGWI ACGGA 3 cut(s) 663, 713, 1018
TspRI CASTG 3 cut(s) 166, 424, 852
Van91I CCANNNNNTGG 1 cut(s) 99
Vha464I CTTAAG 2 cut(s) 1007, 1175
VpaK11BI GGWCC 1 cut(s) 469
VspI ATTAAT 1 cut(s) 611
XagI CCTNNNNNAGG 1 cut(s) 752
XapI RAATTY 3 cut(s) 485, 577, 983
XceI RCATGY 3 cut(s) 122, 381, 906
XmaJI CCTAGG 1 cut(s) 362
XmiI GTMKAC 2 cut(s) 374, 835
XmnI GAANNNNTTC 1 cut(s) 578
XspI CTAG 5 cut(s) 363, 410, 881, 998, 1157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.