AT1G22000

Leucine Rich Repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000140
Physical Location & Seq
Forward (+)
7744094 .. 7745744
1651 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G22000.1

Sequence Viewer

Length: 1398 bp
ATGAGTTTCTTGTGGGATATTATGCCCATTGATAAGCATCTGTCAACTGTTCCAGAAACCGAAGGTTGTCAGCAGAGAATCGAAACTAGGATCTGTGCTTTGCCTGACGATTTGCTCTTGCAGATCTTGCCTCACGTCCCAACAAAAGAGGCAGTCGCCACTTCAATCTTGTCCAAACAATGGCGTTATGTCTGGCTGATGCTGCCTAAACTCGAGTTCAAAGACGAAGGCAGCGAGAGCGTTGGGTGGTTTATTAAAAAGTCATTGCAACTCCATAAGGCACCGAAACTAGATTGTTTGATTGTCGAACTCGGTCCACATTGTCCTATTGACGTCGATGTCAGAAAGTGGGTTGAGAACGCAGTTAATAGAGATGTTAAAGATTTAGATTTCACGCTCCTCTGGAGCGCAGCGCCTACAAGCTTTCCTAAGAGCCTTTACACATGTGACACGCTCGTTTGTTTAACTCTATCCAACCAGATTCTGGTGGATGTGTCTTCCCCGGCTAGTCTACCATCTCTCTTAGATTTGAGTCTTCATTACGTGGTGTATAAAGACGATGGCTCTCTTGTTAGGCTCTTATCAAGTTCCCCTGTTCTCAAGAGGCTGAGTGTGCATAGTCATGAGGATGACAACTTAAAAACCTTTACCGTGAAAGTTTCTTCCTTAGAATCATTAAATTATGATGAGAATTGGCTCAAGGATGAGGTAGAGGATAATGAGGTTGATGAGGTAGTGGATAATGAGGTAGAGGTTGATGATCTCAATGGATCGTTGGTAATAGATTCCCCTGCATTAAAAGAATTGCACTTATCTGAGGTTTGGGACTATTGCTTGATAGAGAATATGTCTTTCCTTGACGAGGCATTCATCAGCAATGTTCCTTACCCCGATGAAAAGTTTCTGAGATCTCTTTCTTCTGTCAAACATCTCTTCTTACTGTTTAGCAAATCAATGGTTGCATGCTGTAACGCCATCAAGTTCTCCTGGCTCATAGAGTTTTACTTTTTTCCAATTAGTTTGGTAGATTGGTTGATGCCGCTTATGTTTTTGCTTCAAAATTCTCCTAAACTTAAAACTCCTACGATTGACAATGACTTCGAGTGTCTCTCACTTTCCTGGAACCAGCCGAGTTCTATTCCCGGATGCTTGTTGTCTCATCTAGAGACCTTTAGGTGGAGAGGCTATGGAGGAAGAGAAGATGCGAAAAAACTACTGATGACATACATTCTCGCTAACTCAAAGTGTTTAAAGACAGTGGAGATCTCCCTCTTAGCAACCTGCAATCTTGAAGAGACACAAAAGGAGTTAAAATCTATGCCTAGGATTTCACAATCATCTCAACTTCTAATCTCCACTAAAAAGTTATGGAGAATTAACGAAAGAACTTATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

465

Amino Acids

53.25

Weight (kDa)

5.02

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 31 - 70 1.6e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 113 - 208 8.7e-06 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 115 - 234 2.9e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 376 - 422 1.7e-17 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05080 AT1G19410 AT1G22000 AT1G26815 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G32375 AT1G32375 AT1G50980 AT1G51055 AT1G55030 AT1G55030 AT1G55660 AT1G55660 AT2G04230 AT2G26860 AT2G26860 AT3G10750 AT3G26920 AT3G26920 AT3G26920 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26930 AT3G26930 AT3G49020 AT3G49030 AT3G49030 AT3G49040 AT3G49045 AT3G49480 AT3G49480 AT3G50710 AT3G51530 AT3G52680 AT3G52680 AT3G52690 AT3G53550 AT3G54910 AT3G54910 AT3G54910 AT3G55670 AT4G00160 AT4G00315 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G10400 AT4G10400 AT4G10400 AT4G10410 AT4G10420 AT4G13965 AT4G15060 AT4G15060 AT4G15075 AT4G26340 AT4G26350 AT5G11370 AT5G38565 AT5G38570 AT5G38580 AT5G38590 AT5G38590 AT5G38590 AT5G38590 AT5G40750 AT5G44850 AT5G50270 AT5G50270 AT5G52460 AT5G52460 AT5G56325 AT5G56370 AT5G56370 AT5G56370 AT5G56380 AT5G56380 AT5G56390 AT5G56400 AT5G56410 AT5G56420 AT5G56420 AT5G56420 AT5G56430 AT5G56440 AT5G56452 AT5G56452 AT5G56555 AT5G56560 AT5G56560 AT5G56570 AT5G56690 AT5G56700 AT5G56700 AT5G56800 AT5G56810 AT5G56810 AT5G56820 AT5G60610 AT5G60610 AT5G62970
malus_domestica MD10G1316000.v1.1
prunus_persica Prupe.4G024600_v2.0.a1
pyrus_communis pycom10g26820
rosa_chinensis RchiOBHm_Chr1g0383101 RchiOBHm_Chr5g0003811 RchiOBHm_Chr5g0069761 RchiOBHm_Chr5g0069771 RchiOBHm_Chr5g0069781 RchiOBHm_Chr5g0069791 RchiOBHm_Chr5g0069821 RchiOBHm_Chr5g0069831
rosa_laevigata RLG00000026130 RLG00000026375 RLG00000031193 RLG00000036088 RLG00000036089 RLG00000036090 RLG00000036095 RLG00000036096 RLG00000036097 RLG00000036099 RLG00000036100
rosa_multiflora Rmu_co8192842.1_g000001 Rmu_co8209784.1_g000001 Rmu_sc0000726.1_g000001 Rmu_sc0000726.1_g000003 Rmu_sc0000726.1_g000007 Rmu_sc0000726.1_g000008 Rmu_sc0000738.1_g000009 Rmu_sc0000738.1_g000010 Rmu_sc0000738.1_g000011 Rmu_sc0000738.1_g000015 Rmu_sc0000738.1_g000018 Rmu_sc0000738.1_g000019 Rmu_sc0004212.1_g000009 Rmu_sc0017283.1_g000003 Rmu_sc0024481.1_g000001
rosa_roxburghii Rroxscaffold_1G00011240 Rroxscaffold_1G00011270 Rroxscaffold_1G00011280 Rroxscaffold_1G00011300 Rroxscaffold_1G00011310 Rroxscaffold_1G00011320 Rroxscaffold_4G00277590
rosa_rugosa Rorug01G0413100 Rorug01G0438500 Rorug01G0438600 Rorug04G0406800 Rorug05G0399300 Rorug05G0399400 Rorug05G0399500 Rorug05G0399600 Rorug05G0399700 Rorug05G0399900.1 Rorug05G0400000 Rorug05G0400100
rosa_samantha Rh1AG436100 Rh1AG464200 Rh1BG421500 Rh1CG434900 Rh1DG454100 Rh5AG034000 Rh5AG034100 Rh5AG456400 Rh5AG456500 Rh5AG456600 Rh5AG456800 Rh5AG457000 Rh5BG032600 Rh5BG475500 Rh5BG475600 Rh5BG475800 Rh5BG475900 Rh5CG036600 Rh5CG036700 Rh5CG499100 Rh5CG499200 Rh5CG499400 Rh5CG499600 Rh5DG032800 Rh5DG487000 Rh5DG487100 Rh5DG487200 Rh5DG487400 Rh5DG487500
rosa_wichuraiana Rw5G003130 Rw5G042610 Rw5G042630 Rw5G042650 Rw5G042660 Rw5G042670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 338
AatII GACGTC 1 cut(s) 336
Acc36I ACCTGC 1 cut(s) 1289
AccB1I GGYRCC 1 cut(s) 280
AccB7I CCANNNNNTGG 2 cut(s) 180, 484
AccI GTMKAC 1 cut(s) 511
AciI CCGC 1 cut(s) 1040
AclWI GGATC 2 cut(s) 98, 778
AcsI RAATTY 1 cut(s) 1060
AcyI GRCGYC 1 cut(s) 333
AfiI CCNNNNNNNGG 4 cut(s) 180, 484, 862, 1176
AflIII ACRYGT 1 cut(s) 443
AgsI TTSAA 4 cut(s) 165, 220, 1058, 1292
AjiI CACGTC 1 cut(s) 136
AjnI CCWGG 2 cut(s) 986, 1118
AluBI AGCT 1 cut(s) 423
AluI AGCT 1 cut(s) 423
Alw26I GTCTC 4 cut(s) 1112, 1160, 1161, 1289
AlwI GGATC 2 cut(s) 98, 778
AlwNI CAGNNNCTG 1 cut(s) 484
Ama87I CYCGRG 1 cut(s) 212
ApeKI GCWGC 3 cut(s) 202, 231, 410
ApoI RAATTY 1 cut(s) 1060
ArsI GACNNNNNNTTYG 2 cut(s) 1082, 1114
Asp700I GAANNNNTTC 1 cut(s) 900
AspA2I CCTAGG 1 cut(s) 1322
AspLEI GCGC 2 cut(s) 410, 415
AspS9I GGNCC 1 cut(s) 314
AsuC2I CCSGG 2 cut(s) 503, 1143
AvaI CYCGRG 1 cut(s) 212
AvaII GGWCC 1 cut(s) 314
AvrII CCTAGG 1 cut(s) 1322
BanI GGYRCC 1 cut(s) 280
BbsI GAAGAC 2 cut(s) 489, 527
BbvI GCAGC 3 cut(s) 189, 243, 422
BccI CCATC 3 cut(s) 523, 554, 983
BciT130I CCWGG 2 cut(s) 988, 1120
BcnI CCSGG 2 cut(s) 503, 1143
BcoDI GTCTC 4 cut(s) 1112, 1160, 1161, 1289
BfaI CTAG 5 cut(s) 87, 290, 507, 1163, 1323
BfoI RGCGCY 1 cut(s) 416
BfuAI ACCTGC 1 cut(s) 1289
BglII AGATCT 3 cut(s) 123, 908, 1263
BisI GCNGC 4 cut(s) 203, 232, 411, 1040
BlnI CCTAGG 1 cut(s) 1322
BlsI GCNGC 4 cut(s) 204, 233, 412, 1041
Bme1390I CCNGG 4 cut(s) 503, 988, 1120, 1143
Bme18I GGWCC 1 cut(s) 314
BmeT110I CYCGRG 1 cut(s) 212
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 314
BmiI GGNNCC 2 cut(s) 282, 1124
BmrFI CCNGG 4 cut(s) 503, 988, 1120, 1143
BmsI GCATC 5 cut(s) 46, 189, 1026, 1136, 1192
BpiI GAAGAC 2 cut(s) 489, 527
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
BpmI CTGGAG 1 cut(s) 424
BpuEI CTTGAG 2 cut(s) 584, 683
BpuMI CCSGG 2 cut(s) 503, 1143
BsaAI YACGTR 1 cut(s) 544
BsaBI GATNNNNATC 1 cut(s) 36
BsaHI GRCGYC 1 cut(s) 333
BsaI GGTCTC 1 cut(s) 1160
BsaJI CCNNGG 2 cut(s) 501, 1322
Bsc4I CCNNNNNNNGG 4 cut(s) 180, 484, 862, 1176
Bse3DI GCAATG 2 cut(s) 263, 883
Bse8I GATNNNNATC 1 cut(s) 36
BseBI CCWGG 2 cut(s) 988, 1120
BseDI CCNNGG 2 cut(s) 501, 1322
BseGI GGATG 4 cut(s) 496, 634, 709, 1151
BseJI GATNNNNATC 1 cut(s) 36
BseLI CCNNNNNNNGG 4 cut(s) 180, 484, 862, 1176
BseMI GCAATG 2 cut(s) 263, 883
BseMII CTCAG 3 cut(s) 599, 807, 896
BseRI GAGGAG 1 cut(s) 389
BseXI GCAGC 3 cut(s) 189, 243, 422
BshNI GGYRCC 1 cut(s) 280
BsiHKCI CYCGRG 1 cut(s) 212
BsiSI CCGG 2 cut(s) 503, 1143
BslFI GGGAC 2 cut(s) 122, 839
BslI CCNNNNNNNGG 4 cut(s) 180, 484, 862, 1176
BsmAI GTCTC 4 cut(s) 1112, 1160, 1161, 1289
BsmFI GGGAC 2 cut(s) 122, 839
BsmI GAATGC 1 cut(s) 866
Bso31I GGTCTC 1 cut(s) 1160
BsoBI CYCGRG 1 cut(s) 212
Bsp143I GATC 6 cut(s) 90, 123, 760, 770, 908, 1263
BspACI CCGC 1 cut(s) 1040
BspCNI CTCAG 3 cut(s) 600, 808, 897
BspHI TCATGA 1 cut(s) 622
BspLI GGNNCC 2 cut(s) 282, 1124
BspMI ACCTGC 1 cut(s) 1289
BspPI GGATC 2 cut(s) 98, 778
BspT107I GGYRCC 1 cut(s) 280
BspTNI GGTCTC 1 cut(s) 1160
BsrDI GCAATG 2 cut(s) 263, 883
BssECI CCNNGG 2 cut(s) 501, 1322
BssMI GATC 6 cut(s) 90, 123, 760, 770, 908, 1263
BssNI GRCGYC 1 cut(s) 333
BssT1I CCWWGG 1 cut(s) 1322
Bst2UI CCWGG 2 cut(s) 988, 1120
Bst4CI ACNGT 4 cut(s) 49, 652, 942, 1258
Bst6I CTCTTC 3 cut(s) 938, 1189, 1287
BstACI GRCGYC 1 cut(s) 333
BstAPI GCANNNNNTGC 1 cut(s) 127
BstBAI YACGTR 1 cut(s) 544
BstC8I GCNNGC 1 cut(s) 964
BstDEI CTNAG 7 cut(s) 429, 523, 608, 667, 816, 905, 1273
BstENI CCTNNNNNAGG 1 cut(s) 860
BstF5I GGATG 4 cut(s) 496, 634, 709, 1151
BstH2I RGCGCY 1 cut(s) 416
BstHHI GCGC 2 cut(s) 410, 415
BstKTI GATC 6 cut(s) 93, 126, 763, 773, 911, 1266
BstMAI GTCTC 4 cut(s) 1112, 1160, 1161, 1289
BstMBI GATC 6 cut(s) 90, 123, 760, 770, 908, 1263
BstMWI GCNNNNNNNGC 4 cut(s) 127, 202, 237, 613
BstNI CCWGG 2 cut(s) 988, 1120
BstNSI RCATGY 2 cut(s) 447, 966
BstSCI CCNGG 4 cut(s) 501, 986, 1118, 1141
BstV1I GCAGC 3 cut(s) 189, 243, 422
BstV2I GAAGAC 2 cut(s) 489, 527
BstX2I RGATCY 4 cut(s) 90, 123, 908, 1263
BstYI RGATCY 4 cut(s) 90, 123, 908, 1263
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 4 cut(s) 496, 634, 709, 1151
BtsIMutI CAGTG 1 cut(s) 1263
BveI ACCTGC 1 cut(s) 1289
Cac8I GCNNGC 1 cut(s) 964
CaiI CAGNNNCTG 1 cut(s) 484
CciI TCATGA 1 cut(s) 622
CfoI GCGC 2 cut(s) 410, 415
Cfr13I GGNCC 1 cut(s) 314
CviAII CATG 3 cut(s) 444, 623, 963
DdeI CTNAG 7 cut(s) 429, 523, 608, 667, 816, 905, 1273
DpnI GATC 6 cut(s) 92, 125, 762, 772, 910, 1265
DpnII GATC 6 cut(s) 90, 123, 760, 770, 908, 1263
DraI TTTAAA 1 cut(s) 1251
DrdI GACNNNNNNGTC 1 cut(s) 338
DseDI GACNNNNNNGTC 1 cut(s) 338
Eam1104I CTCTTC 3 cut(s) 938, 1189, 1287
EarI CTCTTC 3 cut(s) 938, 1189, 1287
Eco130I CCWWGG 1 cut(s) 1322
Eco31I GGTCTC 1 cut(s) 1160
Eco47I GGWCC 1 cut(s) 314
Eco88I CYCGRG 1 cut(s) 212
EcoNI CCTNNNNNAGG 1 cut(s) 860
EcoRII CCWGG 2 cut(s) 986, 1118
EcoT14I CCWWGG 1 cut(s) 1322
ErhI CCWWGG 1 cut(s) 1322
FaeI CATG 3 cut(s) 447, 626, 966
FaqI GGGAC 2 cut(s) 122, 839
FatI CATG 3 cut(s) 443, 622, 962
FblI GTMKAC 1 cut(s) 511
Fnu4HI GCNGC 4 cut(s) 203, 232, 411, 1040
FokI GGATG 4 cut(s) 503, 641, 716, 1158
Fsp4HI GCNGC 4 cut(s) 203, 232, 411, 1040
FspBI CTAG 5 cut(s) 87, 290, 507, 1163, 1323
GlaI GCGC 2 cut(s) 409, 414
GluI GCNGC 4 cut(s) 203, 232, 411, 1040
GsuI CTGGAG 1 cut(s) 424
HaeII RGCGCY 1 cut(s) 416
HapII CCGG 2 cut(s) 503, 1143
HhaI GCGC 2 cut(s) 410, 415
Hin1I GRCGYC 1 cut(s) 333
Hin1II CATG 3 cut(s) 447, 626, 966
Hin6I GCGC 2 cut(s) 408, 413
HinP1I GCGC 2 cut(s) 408, 413
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 1 cut(s) 421
HinfI GANTC 5 cut(s) 78, 481, 532, 671, 785
HpaII CCGG 2 cut(s) 503, 1143
Hpy166II GTNNAC 3 cut(s) 45, 317, 512
Hpy188I TCNGA 3 cut(s) 344, 817, 906
Hpy188III TCNNGA 6 cut(s) 53, 403, 601, 623, 1163, 1289
Hpy8I GTNNAC 3 cut(s) 45, 317, 512
Hpy99I CGWCG 1 cut(s) 338
HpyAV CCTTC 2 cut(s) 56, 221
HpyCH4III ACNGT 4 cut(s) 49, 652, 942, 1258
HpyCH4IV ACGT 3 cut(s) 135, 333, 543
HpyCH4V TGCA 7 cut(s) 121, 268, 616, 794, 808, 962, 1284
HpyF10VI GCNNNNNNNGC 4 cut(s) 127, 202, 237, 613
HpyF3I CTNAG 7 cut(s) 429, 523, 608, 667, 816, 905, 1273
HpySE526I ACGT 3 cut(s) 135, 333, 543
Hsp92I GRCGYC 1 cut(s) 333
Hsp92II CATG 3 cut(s) 447, 626, 966
HspAI GCGC 2 cut(s) 408, 413
Kzo9I GATC 6 cut(s) 90, 123, 760, 770, 908, 1263
LmnI GCTCC 2 cut(s) 402, 405
Lsp1109I GCAGC 3 cut(s) 189, 243, 422
LweI GCATC 5 cut(s) 46, 189, 1026, 1136, 1192
MaeI CTAG 5 cut(s) 87, 290, 507, 1163, 1323
MaeII ACGT 3 cut(s) 135, 333, 543
MaeIII GTNAC 2 cut(s) 446, 968
MalI GATC 6 cut(s) 92, 125, 762, 772, 910, 1265
MboI GATC 6 cut(s) 90, 123, 760, 770, 908, 1263
MboII GAAGA 8 cut(s) 489, 527, 654, 909, 925, 1206, 1211, 1304
MflI RGATCY 4 cut(s) 90, 123, 908, 1263
MluCI AATT 6 cut(s) 679, 691, 803, 1014, 1060, 1374
MlyI GAGTC 1 cut(s) 541
MmeI TCCRAC 1 cut(s) 498
MroXI GAANNNNTTC 1 cut(s) 900
MslI CAYNNNNRTG 2 cut(s) 621, 627
MspI CCGG 2 cut(s) 503, 1143
MspR9I CCNGG 4 cut(s) 503, 988, 1120, 1143
MteI GCGCNGCGC 1 cut(s) 411
Mva1269I GAATGC 1 cut(s) 866
MvaI CCWGG 2 cut(s) 988, 1120
MwoI GCNNNNNNNGC 4 cut(s) 127, 202, 237, 613
NciI CCSGG 2 cut(s) 503, 1143
NdeII GATC 6 cut(s) 90, 123, 760, 770, 908, 1263
NlaIII CATG 3 cut(s) 447, 626, 966
NlaIV GGNNCC 2 cut(s) 282, 1124
NmeAIII GCCGAG 1 cut(s) 1155
NmuCI GTSAC 1 cut(s) 446
NspI RCATGY 2 cut(s) 447, 966
PaeI GCATGC 1 cut(s) 966
PaeR7I CTCGAG 1 cut(s) 212
PagI TCATGA 1 cut(s) 622
PciI ACATGT 1 cut(s) 443
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PctI GAATGC 1 cut(s) 866
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 4 cut(s) 78, 481, 671, 785
PflMI CCANNNNNTGG 2 cut(s) 180, 484
PfoI TCCNGGA 2 cut(s) 1118, 1141
PkrI GCNGC 4 cut(s) 204, 233, 412, 1041
PleI GAGTC 1 cut(s) 540
PpsI GAGTC 1 cut(s) 540
Ppu21I YACGTR 1 cut(s) 544
PscI ACATGT 1 cut(s) 443
Psp6I CCWGG 2 cut(s) 986, 1118
PspGI CCWGG 2 cut(s) 986, 1118
PspN4I GGNNCC 2 cut(s) 282, 1124
PspPI GGNCC 1 cut(s) 314
PspXI VCTCGAGB 1 cut(s) 212
PstNI CAGNNNCTG 1 cut(s) 484
PsuI RGATCY 4 cut(s) 90, 123, 908, 1263
RseI CAYNNNNRTG 2 cut(s) 621, 627
SatI GCNGC 4 cut(s) 203, 232, 411, 1040
Sau3AI GATC 6 cut(s) 90, 123, 760, 770, 908, 1263
Sau96I GGNCC 1 cut(s) 314
SchI GAGTC 1 cut(s) 541
ScrFI CCNGG 4 cut(s) 503, 988, 1120, 1143
SfaNI GCATC 5 cut(s) 46, 189, 1026, 1136, 1192
Sfr274I CTCGAG 1 cut(s) 212
SinI GGWCC 1 cut(s) 314
SlaI CTCGAG 1 cut(s) 212
SmiMI CAYNNNNRTG 2 cut(s) 621, 627
SmlI CTYRAG 3 cut(s) 212, 599, 698
SmoI CTYRAG 3 cut(s) 212, 599, 698
SphI GCATGC 1 cut(s) 966
Sse9I AATT 6 cut(s) 679, 691, 803, 1014, 1060, 1374
SsiI CCGC 1 cut(s) 1040
SspMI CTAG 5 cut(s) 87, 290, 507, 1163, 1323
StyD4I CCNGG 4 cut(s) 501, 986, 1118, 1141
StyI CCWWGG 1 cut(s) 1322
TaaI ACNGT 4 cut(s) 49, 652, 942, 1258
TaiI ACGT 3 cut(s) 138, 336, 546
TaqI TCGA 5 cut(s) 81, 213, 306, 336, 1101
TaqII GACCGA 1 cut(s) 302
TasI AATT 6 cut(s) 679, 691, 803, 1014, 1060, 1374
TauI GCSGC 1 cut(s) 1042
TfiI GAWTC 4 cut(s) 78, 481, 671, 785
TscAI CASTG 1 cut(s) 1263
TseFI GTSAC 1 cut(s) 446
TseI GCWGC 3 cut(s) 202, 231, 410
Tsp45I GTSAC 1 cut(s) 446
TspDTI ATGAA 3 cut(s) 527, 859, 909
TspRI CASTG 1 cut(s) 1263
Van91I CCANNNNNTGG 2 cut(s) 180, 484
VpaK11BI GGWCC 1 cut(s) 314
XagI CCTNNNNNAGG 1 cut(s) 860
XapI RAATTY 1 cut(s) 1060
XbaI TCTAGA 1 cut(s) 1162
XceI RCATGY 2 cut(s) 447, 966
XcmI CCANNNNNNNNNTGG 1 cut(s) 481
XhoI CTCGAG 1 cut(s) 212
XmaJI CCTAGG 1 cut(s) 1322
XmiI GTMKAC 1 cut(s) 511
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 5 cut(s) 87, 290, 507, 1163, 1323
ZraI GACGTC 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.