Rorug01G0438600

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000140
Physical Location & Seq
Forward (+)
53738345 .. 53741874
3530 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0438600.1

Sequence Viewer

Length: 1932 bp
ATGGCTTCCTCCGAAGACCACCATCCCTACCGCCCCACATCGAAACCCTCCAAGCCTTTTTCCCTTACCAACTTTTCCACATGGAAAATAAAACCCAACAACGCCTACACCTTGCCACTCATCCTCTTCCTGTGCATCTTCTCTTACTACTTCGGCCTCTGGCAACACGGCAGCACCGCCCCAGCAACCACCACCACCGCCGGCCTCAACCAACTTCCATGTAACTCCCCCGACACAACCCTAGCCAAAAACCCTCAACAAGCCTTAGATTTCACCACCCACCACAACCCTAACTTCGCCATCAACATTTCCAAACACAACACTCCAAAAACCTACCCTCCCTGCGACGTCAAGTACAGTGAGTACACCCCATGCGAGGACGCGAAGCGATCCTTGAAATTCGAGAGGGACAGACTGATATACAGGGAGAGGCACTGTCCAGCTCAGGATGAGCTGCTCAAGTGCCGTGTTCCGGCACCTCACGGCTACCGGAACACGTTTACTTGGCCCAAAAGTAGAGATCTGGCGTGGTACGCCAATGTTCCGCACAAGGAGTTGACAGTGGAGAAGGCGGTGCAGAATTGGATTATATACCAAGGCGACCGGTTTAAGTTCCCCGGCGGTGGAACCATGTTTCCGAATGGCGCCGATGCCTACATTGATGATATTGGGAAGTTGATCAATCTCAAGGACGGGTCCATTCGGACCGCCATTGATACAGGCTGTGGGGTTGCTAGTTGGGGAGCTTATCTATTGTCCCGGGATATTCTACCAATGTCTTTCGCGCCAAGAGACACACATGAAGCCCAAGTCCAATTCGCTCTCGAGCGAGGAGTACCCGCCCTCATCGGCGTCATTGCGTCGAAAAGACTTCCTTACCCTTCTAGAGCCTTTGACATGGCTCATTGCTCTCGTTGCCTCATTCCTTGGGGACAATACGATGGAGTTTACTTGACGGAGGTTGATAGAGTTCTGAGGCCTGGTGGGTACTGGATTCTATCCGGCCCACCAATCCGCTGGAAGAAATACTGGAAGGGTTGGGAAAGAACACAGGAAGACTTGAACGAAGAACAAACTGGCATAGAGGATGTAGCCACTAGCCTTTGCTGGAAGAAGTTGGTGGAGAAGGACGACATTGCAATTTGGCAAAAACCAACTAATCACTTAAACTGCAAAATGAACCGAAAGCTTGCCAAGAATCGCAACTTCTGCCCTGCTCAGGATCCTGATCAAGCTTGGTACACAAAGTTGGAGACTTGTTTGACTCCTTTACCGGAAGTTTCTGGCGAAGATGATGTTGCTGGTGGGAAGTTGGCAAAGTGGCCGGCGAGACTAACCTCAGTGCCGCCGAGAATTAGTAGGGGAACTGTGAAGGGTGTCACAGCTGAAGATTTTCAACAAGATTCGGAGCTATGGCGAAAAAGGGTAACACATTATAAAACAGTGAATAATCAACTTGCGCAGCCCGGAAGGTATAGAAACCTTCTGGATATGAATGCTTACTTGGGTGGATTTGCTGCTGCCCTAGTTGATCTGCCTGTTTGGGTCATGAATATGGTTCCCGTCGACGTGAAGATTAACACACTCGGAGTCATCTATGAACGTGGATTGATCGGATCATATCAAAACTGGTGTGAAGCAATGTCTACATATCCAAGAACTTATGACCTCATTCATGCTGATACAGTGTTTAGTCTCTACAAGGACAGGTGCGAAGTAGAAGACATTTTGCTAGAGATGGATAGAATTCTAAGGCCAGAGGGAAGCGTGATCATCCGAGACGACGTAGATTTGTTGGTGAAGATCAAGAGCATTATCGACCACATGGATTGGGATAGTCAAATTATTGATCACGAAGACGGACCTCATGAGAGGGAAAAGCTACTATTCGCGGTGAAAAAGTACTGGACTGCTCCCGCTCCGGCAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

643

Amino Acids

73.41

Weight (kDa)

7.53

Isoelectric Point (pI)

33.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_29 PF03141 121 - 633 6.2e-228 Putative S-adenosyl-L-methionine-dependent methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05080 AT1G19410 AT1G22000 AT1G26815 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G32375 AT1G32375 AT1G50980 AT1G51055 AT1G55030 AT1G55030 AT1G55660 AT1G55660 AT2G04230 AT2G26860 AT2G26860 AT3G10750 AT3G26920 AT3G26920 AT3G26920 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26930 AT3G26930 AT3G49020 AT3G49030 AT3G49030 AT3G49040 AT3G49045 AT3G49480 AT3G49480 AT3G50710 AT3G51530 AT3G52680 AT3G52680 AT3G52690 AT3G53550 AT3G54910 AT3G54910 AT3G54910 AT3G55670 AT4G00160 AT4G00315 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G10400 AT4G10400 AT4G10400 AT4G10410 AT4G10420 AT4G13965 AT4G15060 AT4G15060 AT4G15075 AT4G26340 AT4G26350 AT5G11370 AT5G38565 AT5G38570 AT5G38580 AT5G38590 AT5G38590 AT5G38590 AT5G38590 AT5G40750 AT5G44850 AT5G50270 AT5G50270 AT5G52460 AT5G52460 AT5G56325 AT5G56370 AT5G56370 AT5G56370 AT5G56380 AT5G56380 AT5G56390 AT5G56400 AT5G56410 AT5G56420 AT5G56420 AT5G56420 AT5G56430 AT5G56440 AT5G56452 AT5G56452 AT5G56555 AT5G56560 AT5G56560 AT5G56570 AT5G56690 AT5G56700 AT5G56700 AT5G56800 AT5G56810 AT5G56810 AT5G56820 AT5G60610 AT5G60610 AT5G62970
malus_domestica MD10G1316000.v1.1
prunus_persica Prupe.4G024600_v2.0.a1
pyrus_communis pycom10g26820
rosa_chinensis RchiOBHm_Chr1g0383101 RchiOBHm_Chr5g0003811 RchiOBHm_Chr5g0069761 RchiOBHm_Chr5g0069771 RchiOBHm_Chr5g0069781 RchiOBHm_Chr5g0069791 RchiOBHm_Chr5g0069821 RchiOBHm_Chr5g0069831
rosa_laevigata RLG00000026130 RLG00000026375 RLG00000031193 RLG00000036088 RLG00000036089 RLG00000036090 RLG00000036095 RLG00000036096 RLG00000036097 RLG00000036099 RLG00000036100
rosa_multiflora Rmu_co8192842.1_g000001 Rmu_co8209784.1_g000001 Rmu_sc0000726.1_g000001 Rmu_sc0000726.1_g000003 Rmu_sc0000726.1_g000007 Rmu_sc0000726.1_g000008 Rmu_sc0000738.1_g000009 Rmu_sc0000738.1_g000010 Rmu_sc0000738.1_g000011 Rmu_sc0000738.1_g000015 Rmu_sc0000738.1_g000018 Rmu_sc0000738.1_g000019 Rmu_sc0004212.1_g000009 Rmu_sc0017283.1_g000003 Rmu_sc0024481.1_g000001
rosa_roxburghii Rroxscaffold_1G00011240 Rroxscaffold_1G00011270 Rroxscaffold_1G00011280 Rroxscaffold_1G00011300 Rroxscaffold_1G00011310 Rroxscaffold_1G00011320 Rroxscaffold_4G00277590
rosa_rugosa Rorug01G0413100 Rorug01G0438500 Rorug01G0438600 Rorug04G0406800 Rorug05G0399300 Rorug05G0399400 Rorug05G0399500 Rorug05G0399600 Rorug05G0399700 Rorug05G0399900.1 Rorug05G0400000 Rorug05G0400100
rosa_samantha Rh1AG436100 Rh1AG464200 Rh1BG421500 Rh1CG434900 Rh1DG454100 Rh5AG034000 Rh5AG034100 Rh5AG456400 Rh5AG456500 Rh5AG456600 Rh5AG456800 Rh5AG457000 Rh5BG032600 Rh5BG475500 Rh5BG475600 Rh5BG475800 Rh5BG475900 Rh5CG036600 Rh5CG036700 Rh5CG499100 Rh5CG499200 Rh5CG499400 Rh5CG499600 Rh5DG032800 Rh5DG487000 Rh5DG487100 Rh5DG487200 Rh5DG487400 Rh5DG487500
rosa_wichuraiana Rw5G003130 Rw5G042610 Rw5G042630 Rw5G042650 Rw5G042660 Rw5G042670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1437
AatII GACGTC 1 cut(s) 351
Acc16I TGCGCA 1 cut(s) 1461
AccB1I GGYRCC 2 cut(s) 475, 644
AccBSI CCGCTC 1 cut(s) 1919
AccI GTMKAC 2 cut(s) 1566, 1646
AccII CGCG 3 cut(s) 383, 785, 1892
AclWI GGATC 4 cut(s) 384, 1217, 1230, 1624
AcoI YGGCCR 1 cut(s) 1322
AcsI RAATTY 2 cut(s) 398, 1746
AcuI CTGAAG 1 cut(s) 1407
AcyI GRCGYC 3 cut(s) 348, 645, 852
AfaI GTAC 7 cut(s) 356, 365, 533, 837, 989, 1241, 1904
AfiI CCNNNNNNNGG 4 cut(s) 376, 472, 623, 1219
AflIII ACRYGT 1 cut(s) 495
AgeI ACCGGT 1 cut(s) 603
AgsI TTSAA 3 cut(s) 397, 1063, 1397
AjiI CACGTC 1 cut(s) 1570
AjnI CCWGG 1 cut(s) 979
AjuI GAANNNNNNNTTGG 2 cut(s) 1487, 1519
AloI GAACNNNNNNTCC 2 cut(s) 619, 651
AluBI AGCT 8 cut(s) 443, 454, 746, 1189, 1235, 1385, 1411, 1882
AluI AGCT 8 cut(s) 443, 454, 746, 1189, 1235, 1385, 1411, 1882
Alw26I GTCTC 5 cut(s) 786, 1247, 1324, 1700, 1773
AlwI GGATC 4 cut(s) 384, 1217, 1230, 1624
Ama87I CYCGRG 2 cut(s) 759, 824
AoxI GGCC 7 cut(s) 154, 202, 506, 977, 1003, 1322, 1754
ApeKI GCWGC 5 cut(s) 171, 454, 1462, 1517, 1520
ApoI RAATTY 2 cut(s) 398, 1746
AsiGI ACCGGT 1 cut(s) 603
Asp700I GAANNNNTTC 1 cut(s) 1392
AspLEI GCGC 3 cut(s) 647, 787, 1462
AspS9I GGNCC 5 cut(s) 507, 696, 705, 1004, 1862
AsuC2I CCSGG 4 cut(s) 618, 760, 761, 1467
AsuHPI GGTGA 3 cut(s) 265, 1810, 1906
AvaI CYCGRG 2 cut(s) 759, 824
AvaII GGWCC 3 cut(s) 696, 705, 1862
BamHI GGATCC 1 cut(s) 1222
BanI GGYRCC 2 cut(s) 475, 644
BbsI GAAGAC 4 cut(s) 21, 1062, 1728, 1863
BbvI GCAGC 5 cut(s) 183, 441, 1474, 1504, 1507
BccI CCATC 4 cut(s) 30, 308, 935, 1732
BceAI ACGGC 3 cut(s) 184, 450, 499
BciT130I CCWGG 1 cut(s) 981
BclI TGATCA 4 cut(s) 678, 1228, 1770, 1849
BcnI CCSGG 4 cut(s) 618, 760, 761, 1467
BcoDI GTCTC 5 cut(s) 786, 1247, 1324, 1700, 1773
BfaI CTAG 6 cut(s) 242, 735, 885, 1098, 1526, 1733
BfoI RGCGCY 1 cut(s) 648
BglII AGATCT 1 cut(s) 520
BisI GCNGC 6 cut(s) 172, 455, 1346, 1463, 1518, 1521
BlsI GCNGC 6 cut(s) 173, 456, 1347, 1464, 1519, 1522
BmcAI AGTACT 1 cut(s) 1904
Bme1390I CCNGG 5 cut(s) 618, 760, 761, 981, 1467
Bme18I GGWCC 3 cut(s) 696, 705, 1862
BmeT110I CYCGRG 2 cut(s) 759, 824
BmgBI CACGTC 1 cut(s) 1570
BmgT120I GGNCC 5 cut(s) 507, 696, 705, 1004, 1862
BmiI GGNNCC 6 cut(s) 477, 628, 646, 697, 1224, 1560
BmrFI CCNGG 5 cut(s) 618, 760, 761, 981, 1467
BmsI GCATC 2 cut(s) 144, 640
BpiI GAAGAC 4 cut(s) 21, 1062, 1728, 1863
Bpu10I CCTNAGC 2 cut(s) 444, 1218
BpuEI CTTGAG 2 cut(s) 443, 671
BpuMI CCSGG 4 cut(s) 618, 760, 761, 1467
BsaBI GATNNNNATC 1 cut(s) 1227
BsaHI GRCGYC 3 cut(s) 348, 645, 852
BsaJI CCNNGG 4 cut(s) 595, 616, 759, 926
BsaWI WCCGGW 3 cut(s) 489, 603, 1273
BsaXI ACNNNNNCTCC 2 cut(s) 322, 352
Bsc4I CCNNNNNNNGG 4 cut(s) 376, 472, 623, 1219
Bse118I RCCGGY 3 cut(s) 200, 603, 1324
Bse1I ACTGG 5 cut(s) 995, 1034, 1081, 1634, 1910
Bse3DI GCAATG 4 cut(s) 855, 904, 1134, 1647
Bse8I GATNNNNATC 1 cut(s) 1227
BseBI CCWGG 1 cut(s) 981
BseDI CCNNGG 4 cut(s) 595, 616, 759, 926
BseGI GGATG 5 cut(s) 22, 120, 454, 1093, 1773
BseJI GATNNNNATC 1 cut(s) 1227
BseLI CCNNNNNNNGG 4 cut(s) 376, 472, 623, 1219
BseMI GCAATG 4 cut(s) 855, 904, 1134, 1647
BseMII CTCAG 4 cut(s) 458, 965, 1232, 1353
BseNI ACTGG 5 cut(s) 995, 1034, 1081, 1634, 1910
BseRI GAGGAG 1 cut(s) 846
BseXI GCAGC 5 cut(s) 183, 441, 1474, 1504, 1507
BseYI CCCAGC 1 cut(s) 181
BsgI GTGCAG 1 cut(s) 596
Bsh1236I CGCG 3 cut(s) 383, 785, 1892
Bsh1285I CGRYCG 1 cut(s) 604
BshFI GGCC 7 cut(s) 156, 204, 508, 979, 1005, 1324, 1756
BshNI GGYRCC 2 cut(s) 475, 644
BshTI ACCGGT 1 cut(s) 603
BsiEI CGRYCG 1 cut(s) 604
BsiHKCI CYCGRG 2 cut(s) 759, 824
BslFI GGGAC 3 cut(s) 422, 742, 945
BslI CCNNNNNNNGG 4 cut(s) 376, 472, 623, 1219
BsmAI GTCTC 5 cut(s) 786, 1247, 1324, 1700, 1773
BsmBI CGTCTC 1 cut(s) 1773
BsmFI GGGAC 3 cut(s) 422, 742, 945
BsmI GAATGC 1 cut(s) 1501
BsnI GGCC 7 cut(s) 156, 204, 508, 979, 1005, 1324, 1756
BsoBI CYCGRG 2 cut(s) 759, 824
BspANI GGCC 7 cut(s) 156, 204, 508, 979, 1005, 1324, 1756
BspCNI CTCAG 4 cut(s) 457, 966, 1231, 1352
BspFNI CGCG 3 cut(s) 383, 785, 1892
BspHI TCATGA 2 cut(s) 1548, 1867
BspLI GGNNCC 6 cut(s) 477, 628, 646, 697, 1224, 1560
BspPI GGATC 4 cut(s) 384, 1217, 1230, 1624
BspT107I GGYRCC 2 cut(s) 475, 644
BsrBI CCGCTC 1 cut(s) 1919
BsrDI GCAATG 4 cut(s) 855, 904, 1134, 1647
BsrFI RCCGGY 3 cut(s) 200, 603, 1324
BsrI ACTGG 5 cut(s) 995, 1034, 1081, 1634, 1910
BssAI RCCGGY 3 cut(s) 200, 603, 1324
BssECI CCNNGG 4 cut(s) 595, 616, 759, 926
BssNI GRCGYC 3 cut(s) 348, 645, 852
BssT1I CCWWGG 2 cut(s) 595, 926
Bst2UI CCWGG 1 cut(s) 981
Bst4CI ACNGT 6 cut(s) 359, 437, 562, 1369, 1444, 1687
Bst6I CTCTTC 1 cut(s) 131
BstACI GRCGYC 3 cut(s) 348, 645, 852
BstAPI GCANNNNNTGC 1 cut(s) 1209
BstC8I GCNNGC 3 cut(s) 202, 1191, 1326
BstDEI CTNAG 6 cut(s) 265, 444, 974, 1218, 1339, 1751
BstF5I GGATG 5 cut(s) 22, 120, 454, 1093, 1773
BstFNI CGCG 3 cut(s) 383, 785, 1892
BstH2I RGCGCY 1 cut(s) 648
BstHHI GCGC 3 cut(s) 647, 787, 1462
BstMAI GTCTC 5 cut(s) 786, 1247, 1324, 1700, 1773
BstMCI CGRYCG 1 cut(s) 604
BstMWI GCNNNNNNNGC 3 cut(s) 533, 915, 1209
BstNI CCWGG 1 cut(s) 981
BstSCI CCNGG 5 cut(s) 616, 758, 759, 979, 1465
BstUI CGCG 3 cut(s) 383, 785, 1892
BstV1I GCAGC 5 cut(s) 183, 441, 1474, 1504, 1507
BstV2I GAAGAC 4 cut(s) 21, 1062, 1728, 1863
BstX2I RGATCY 2 cut(s) 520, 1222
BstXI CCANNNNNNTGG 1 cut(s) 1017
BstYI RGATCY 2 cut(s) 520, 1222
BsuRI GGCC 7 cut(s) 156, 204, 508, 979, 1005, 1324, 1756
BtrI CACGTC 1 cut(s) 1570
BtsCI GGATG 5 cut(s) 22, 120, 454, 1093, 1773
BtsIMutI CAGTG 6 cut(s) 364, 433, 567, 1347, 1449, 1692
Cac8I GCNNGC 3 cut(s) 202, 1191, 1326
CciI TCATGA 2 cut(s) 1548, 1867
CfoI GCGC 3 cut(s) 647, 787, 1462
Cfr10I RCCGGY 3 cut(s) 200, 603, 1324
Cfr13I GGNCC 5 cut(s) 507, 696, 705, 1004, 1862
Cfr9I CCCGGG 1 cut(s) 759
CpoI CGGWCCG 1 cut(s) 705
CseI GACGC 3 cut(s) 389, 841, 849
Csp6I GTAC 7 cut(s) 355, 364, 532, 836, 988, 1240, 1903
CspAI ACCGGT 1 cut(s) 603
CspCI CAANNNNNGTGG 2 cut(s) 1811, 1846
CspI CGGWCCG 1 cut(s) 705
CviQI GTAC 7 cut(s) 355, 364, 532, 836, 988, 1240, 1903
DdeI CTNAG 6 cut(s) 265, 444, 974, 1218, 1339, 1751
DinI GGCGCC 1 cut(s) 646
EaeI YGGCCR 1 cut(s) 1322
Eam1104I CTCTTC 1 cut(s) 131
EarI CTCTTC 1 cut(s) 131
Eco130I CCWWGG 2 cut(s) 595, 926
Eco147I AGGCCT 1 cut(s) 979
Eco47I GGWCC 3 cut(s) 696, 705, 1862
Eco57I CTGAAG 1 cut(s) 1407
Eco88I CYCGRG 2 cut(s) 759, 824
EcoRI GAATTC 1 cut(s) 1746
EcoRII CCWGG 1 cut(s) 979
EcoT14I CCWWGG 2 cut(s) 595, 926
EgeI GGCGCC 1 cut(s) 646
EheI GGCGCC 1 cut(s) 646
ErhI CCWWGG 2 cut(s) 595, 926
Esp3I CGTCTC 1 cut(s) 1773
FalI AAGNNNNNCTT 4 cut(s) 377, 409, 859, 891
FaqI GGGAC 3 cut(s) 422, 742, 945
FauI CCCGC 2 cut(s) 847, 1924
FbaI TGATCA 4 cut(s) 678, 1228, 1770, 1849
FblI GTMKAC 2 cut(s) 1566, 1646
Fnu4HI GCNGC 6 cut(s) 172, 455, 1346, 1463, 1518, 1521
FokI GGATG 5 cut(s) 9, 107, 461, 1100, 1760
Fsp4HI GCNGC 6 cut(s) 172, 455, 1346, 1463, 1518, 1521
FspBI CTAG 6 cut(s) 242, 735, 885, 1098, 1526, 1733
FspI TGCGCA 1 cut(s) 1461
GlaI GCGC 3 cut(s) 646, 786, 1461
GluI GCNGC 6 cut(s) 172, 455, 1346, 1463, 1518, 1521
GsaI CCCAGC 1 cut(s) 185
HaeII RGCGCY 1 cut(s) 648
HaeIII GGCC 7 cut(s) 156, 204, 508, 979, 1005, 1324, 1756
HgaI GACGC 3 cut(s) 389, 841, 849
HhaI GCGC 3 cut(s) 647, 787, 1462
Hin1I GRCGYC 3 cut(s) 348, 645, 852
Hin6I GCGC 3 cut(s) 645, 785, 1460
HinP1I GCGC 3 cut(s) 645, 785, 1460
HincII GTYRAC 2 cut(s) 558, 1567
HindII GTYRAC 2 cut(s) 558, 1567
HindIII AAGCTT 2 cut(s) 1187, 1233
HinfI GANTC 5 cut(s) 994, 1198, 1264, 1403, 1590
HphI GGTGA 3 cut(s) 265, 1810, 1906
Hpy166II GTNNAC 7 cut(s) 366, 501, 558, 949, 1242, 1567, 1647
Hpy188I TCNGA 8 cut(s) 13, 639, 705, 975, 1408, 1589, 1616, 1778
Hpy8I GTNNAC 7 cut(s) 366, 501, 558, 949, 1242, 1567, 1647
Hpy99I CGWCG 5 cut(s) 350, 865, 1568, 1571, 1787
HpyAV CCTTC 7 cut(s) 562, 891, 1027, 1120, 1366, 1464, 1493
HpyCH4III ACNGT 6 cut(s) 359, 437, 562, 1369, 1444, 1687
HpyCH4IV ACGT 5 cut(s) 348, 497, 1569, 1603, 1785
HpyCH4V TGCA 4 cut(s) 135, 577, 1139, 1173
HpyF10VI GCNNNNNNNGC 3 cut(s) 533, 915, 1209
HpyF3I CTNAG 6 cut(s) 265, 444, 974, 1218, 1339, 1751
HpySE526I ACGT 5 cut(s) 348, 497, 1569, 1603, 1785
Hsp92I GRCGYC 3 cut(s) 348, 645, 852
HspAI GCGC 3 cut(s) 645, 785, 1460
KasI GGCGCC 1 cut(s) 644
KroI GCCGGC 2 cut(s) 200, 1324
KroNI GCCGGC 2 cut(s) 202, 1326
Ksp22I TGATCA 4 cut(s) 678, 1228, 1770, 1849
LmnI GCTCC 4 cut(s) 743, 1408, 1918, 1924
Lsp1109I GCAGC 5 cut(s) 183, 441, 1474, 1504, 1507
LweI GCATC 2 cut(s) 144, 640
MaeI CTAG 6 cut(s) 242, 735, 885, 1098, 1526, 1733
MaeII ACGT 5 cut(s) 348, 497, 1569, 1603, 1785
MaeIII GTNAC 3 cut(s) 221, 1378, 1426
MbiI CCGCTC 1 cut(s) 1919
MflI RGATCY 2 cut(s) 520, 1222
MluCI AATT 7 cut(s) 398, 580, 815, 1140, 1353, 1746, 1842
Mly113I GGCGCC 1 cut(s) 645
MlyI GAGTC 2 cut(s) 1258, 1599
MmeI TCCRAC 1 cut(s) 1230
MroNI GCCGGC 2 cut(s) 200, 1324
MroXI GAANNNNTTC 1 cut(s) 1392
MseI TTAA 3 cut(s) 609, 1166, 1578
MslI CAYNNNNRTG 1 cut(s) 1553
MspA1I CMGCKG 2 cut(s) 1017, 1385
MspR9I CCNGG 5 cut(s) 618, 760, 761, 981, 1467
Mva1269I GAATGC 1 cut(s) 1501
MvaI CCWGG 1 cut(s) 981
MvnI CGCG 3 cut(s) 383, 785, 1892
MwoI GCNNNNNNNGC 3 cut(s) 533, 915, 1209
NaeI GCCGGC 2 cut(s) 202, 1326
NarI GGCGCC 1 cut(s) 645
NciI CCSGG 4 cut(s) 618, 760, 761, 1467
NgoMIV GCCGGC 2 cut(s) 200, 1324
NlaIV GGNNCC 6 cut(s) 477, 628, 646, 697, 1224, 1560
NmeAIII GCCGAG 1 cut(s) 1374
NmuCI GTSAC 1 cut(s) 1378
NsbI TGCGCA 1 cut(s) 1461
PaeR7I CTCGAG 1 cut(s) 824
PagI TCATGA 2 cut(s) 1548, 1867
PceI AGGCCT 1 cut(s) 979
PctI GAATGC 1 cut(s) 1501
PdiI GCCGGC 2 cut(s) 202, 1326
PdmI GAANNNNTTC 1 cut(s) 1392
PfeI GAWTC 3 cut(s) 994, 1198, 1403
PinAI ACCGGT 1 cut(s) 603
PkrI GCNGC 6 cut(s) 173, 456, 1347, 1464, 1519, 1522
PleI GAGTC 2 cut(s) 1258, 1598
PluTI GGCGCC 1 cut(s) 648
PpsI GAGTC 2 cut(s) 1258, 1598
PsiI TTATAA 1 cut(s) 1437
Psp6I CCWGG 1 cut(s) 979
PspFI CCCAGC 1 cut(s) 181
PspGI CCWGG 1 cut(s) 979
PspN4I GGNNCC 6 cut(s) 477, 628, 646, 697, 1224, 1560
PspPI GGNCC 5 cut(s) 507, 696, 705, 1004, 1862
PsuI RGATCY 2 cut(s) 520, 1222
PvuII CAGCTG 1 cut(s) 1385
RsaI GTAC 7 cut(s) 356, 365, 533, 837, 989, 1241, 1904
RsaNI GTAC 7 cut(s) 355, 364, 532, 836, 988, 1240, 1903
RseI CAYNNNNRTG 1 cut(s) 1553
Rsr2I CGGWCCG 1 cut(s) 705
RsrII CGGWCCG 1 cut(s) 705
SalI GTCGAC 1 cut(s) 1565
SaqAI TTAA 3 cut(s) 609, 1166, 1578
SatI GCNGC 6 cut(s) 172, 455, 1346, 1463, 1518, 1521
Sau96I GGNCC 5 cut(s) 507, 696, 705, 1004, 1862
ScaI AGTACT 1 cut(s) 1904
SchI GAGTC 2 cut(s) 1258, 1599
ScrFI CCNGG 5 cut(s) 618, 760, 761, 981, 1467
SfaNI GCATC 2 cut(s) 144, 640
SfoI GGCGCC 1 cut(s) 646
Sfr274I CTCGAG 1 cut(s) 824
SgrDI CGTCGACG 1 cut(s) 1565
SinI GGWCC 3 cut(s) 696, 705, 1862
SlaI CTCGAG 1 cut(s) 824
SmaI CCCGGG 1 cut(s) 761
SmiMI CAYNNNNRTG 1 cut(s) 1553
SmlI CTYRAG 3 cut(s) 458, 686, 824
SmoI CTYRAG 3 cut(s) 458, 686, 824
Sse9I AATT 7 cut(s) 398, 580, 815, 1140, 1353, 1746, 1842
SseBI AGGCCT 1 cut(s) 979
SspDI GGCGCC 1 cut(s) 644
SspMI CTAG 6 cut(s) 242, 735, 885, 1098, 1526, 1733
StuI AGGCCT 1 cut(s) 979
StyD4I CCNGG 5 cut(s) 616, 758, 759, 979, 1465
StyI CCWWGG 2 cut(s) 595, 926
TaaI ACNGT 6 cut(s) 359, 437, 562, 1369, 1444, 1687
TaiI ACGT 5 cut(s) 351, 500, 1572, 1606, 1788
TaqI TCGA 6 cut(s) 41, 402, 825, 863, 1566, 1818
TasI AATT 7 cut(s) 398, 580, 815, 1140, 1353, 1746, 1842
TatI WGTACW 3 cut(s) 354, 363, 1902
TauI GCSGC 1 cut(s) 1348
TfiI GAWTC 3 cut(s) 994, 1198, 1403
Tru1I TTAA 3 cut(s) 609, 1166, 1578
Tru9I TTAA 3 cut(s) 609, 1166, 1578
TscAI CASTG 6 cut(s) 364, 440, 567, 1347, 1449, 1692
TseFI GTSAC 1 cut(s) 1378
TseI GCWGC 5 cut(s) 171, 454, 1462, 1517, 1520
Tsp45I GTSAC 1 cut(s) 1378
TspDTI ATGAA 6 cut(s) 816, 1193, 1508, 1565, 1614, 1664
TspGWI ACGGA 2 cut(s) 971, 1875
TspMI CCCGGG 1 cut(s) 759
TspRI CASTG 6 cut(s) 364, 440, 567, 1347, 1449, 1692
VpaK11BI GGWCC 3 cut(s) 696, 705, 1862
XapI RAATTY 2 cut(s) 398, 1746
XbaI TCTAGA 1 cut(s) 884
XcmI CCANNNNNNNNNTGG 1 cut(s) 1014
XhoI CTCGAG 1 cut(s) 824
XmaI CCCGGG 1 cut(s) 759
XmiI GTMKAC 2 cut(s) 1566, 1646
XmnI GAANNNNTTC 1 cut(s) 1392
XspI CTAG 6 cut(s) 242, 735, 885, 1098, 1526, 1733
ZraI GACGTC 1 cut(s) 349
ZrmI AGTACT 1 cut(s) 1904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.