AT4G00160

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000140
Physical Location & Seq
Forward (+)
63410 .. 65479
2070 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G00160.1

Sequence Viewer

Length: 1362 bp
ATGGAACAAGGTGAAAGTTTGCGAATTAGAGTTGTTATGGGTAAAGACAGGATCAGTGAGTTGCCTGATGCTTTGCTTATAAAGATACTGTCTTTTCTTCCAACAAAGATTGTCGTAGCCACGAGTGTTTTTTCTAAACAATGGAGGCCTCTTTGGAAGTTGGTGCCAAATCTCGAGTTCGATTCTGAGGATTACGACGACAAAGAACAGTATACATTTTCAGAGATAGTTTGCAAATCTTTCCTTTCACATAAAGCCCCGGTTCTAGAGAGCTTTCGTCTTGAGTTTGAATCAGAAAAAGTTGATCCTGTAGATATTGGACTTTGGGTTGGAATTGCGTTTTCTAGACATCTGCGTGAATTGGTGCTCGTTGCTGCTGATACCGGGACGGGGACGGCTTTCAAATTTCCGAGTAGCTTGTGTACTTGCAACACACTTGAGACTTTGAGACTCGTACTTTTGATTCTTGTTGATATCTCTTCTCCGGTAGTAATGAAGTCTCTTAGGACTCTCCATCTTGAGCTTGTGAGCTACAAAGACGAATCATCTATCCGTAACCTTTTATCAGGCTGCCCTATTCTTGAAGAATTGCTTGTGATTCGAGGTGAAGATTCTGATATTGAGGTTTTCACTATTGATGAGGTCCCTTCTTTGAAGAGATTAACGATTAATGACGACCATGATGGACAAGAGTTTTGGGGATATGTGATAAATGCTCCTTCTTTGAAATACTTACTGATTGAAGACTTAAGATGTCCCGGGTTTTGTCTGAATGCGCCGGAGCTAATGGAGGCAAATATTTTTGATGGTACATCTATAACCAATGACAACTTTCTTGGATATCTCACTTCAGTCAAACGGTTGTTGTTGAATTTATCACCTTGGAAGATTACATATCCTACTGGAAGTATCTTCTATCAGCTGGTATCTCTAGAGATGTATACACGTGAAATAGATTGGTGGGATCTACTTACGCTCATGCTCGAACATTCTCCTAAACTACAAGTTCTCAAGCTCACTGATAATTGTGTGAAATTTCATAAAAATGGTTTGCCGGGCGGCAAATGGAATGAGCCAAAGTATGTCCCTGAATGTTTGTTGTCGCATTTAGAGACATTTGTGTGGAGAAGATTCGATTGGGGAAGAGAAGAAGAGAAAGAAATAGCTACATACATTCTAAAGAACGCAAGACGATTGAACAAGGCAACTTTCTCGACAAATCCTGTTAACTCGGAAGAGCTCGACAAGTTGAAAGAGAGACGTAAGGTGCACAACGAATTAGATGGTGTGGTCAGGGCTTCAAATTCATGCCAGTTTGTATTCAAATTCGATACATCTTATCATGTATCAGACTCTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

453

Amino Acids

52.06

Weight (kDa)

5.28

Isoelectric Point (pI)

48.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 57 6.4e-07 F-box domain
LRR_At5g56370 PF24758 109 - 252 2e-11 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 167 - 192 2.4e-08 Leucine Rich Repeat
FBD PF08387 358 - 404 1e-20 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05080 AT1G19410 AT1G22000 AT1G26815 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G32375 AT1G32375 AT1G50980 AT1G51055 AT1G55030 AT1G55030 AT1G55660 AT1G55660 AT2G04230 AT2G26860 AT2G26860 AT3G10750 AT3G26920 AT3G26920 AT3G26920 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26930 AT3G26930 AT3G49020 AT3G49030 AT3G49030 AT3G49040 AT3G49045 AT3G49480 AT3G49480 AT3G50710 AT3G51530 AT3G52680 AT3G52680 AT3G52690 AT3G53550 AT3G54910 AT3G54910 AT3G54910 AT3G55670 AT4G00160 AT4G00315 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G10400 AT4G10400 AT4G10400 AT4G10410 AT4G10420 AT4G13965 AT4G15060 AT4G15060 AT4G15075 AT4G26340 AT4G26350 AT5G11370 AT5G38565 AT5G38570 AT5G38580 AT5G38590 AT5G38590 AT5G38590 AT5G38590 AT5G40750 AT5G44850 AT5G50270 AT5G50270 AT5G52460 AT5G52460 AT5G56325 AT5G56370 AT5G56370 AT5G56370 AT5G56380 AT5G56380 AT5G56390 AT5G56400 AT5G56410 AT5G56420 AT5G56420 AT5G56420 AT5G56430 AT5G56440 AT5G56452 AT5G56452 AT5G56555 AT5G56560 AT5G56560 AT5G56570 AT5G56690 AT5G56700 AT5G56700 AT5G56800 AT5G56810 AT5G56810 AT5G56820 AT5G60610 AT5G60610 AT5G62970
malus_domestica MD10G1316000.v1.1
prunus_persica Prupe.4G024600_v2.0.a1
pyrus_communis pycom10g26820
rosa_chinensis RchiOBHm_Chr1g0383101 RchiOBHm_Chr5g0003811 RchiOBHm_Chr5g0069761 RchiOBHm_Chr5g0069771 RchiOBHm_Chr5g0069781 RchiOBHm_Chr5g0069791 RchiOBHm_Chr5g0069821 RchiOBHm_Chr5g0069831
rosa_laevigata RLG00000026130 RLG00000026375 RLG00000031193 RLG00000036088 RLG00000036089 RLG00000036090 RLG00000036095 RLG00000036096 RLG00000036097 RLG00000036099 RLG00000036100
rosa_multiflora Rmu_co8192842.1_g000001 Rmu_co8209784.1_g000001 Rmu_sc0000726.1_g000001 Rmu_sc0000726.1_g000003 Rmu_sc0000726.1_g000007 Rmu_sc0000726.1_g000008 Rmu_sc0000738.1_g000009 Rmu_sc0000738.1_g000010 Rmu_sc0000738.1_g000011 Rmu_sc0000738.1_g000015 Rmu_sc0000738.1_g000018 Rmu_sc0000738.1_g000019 Rmu_sc0004212.1_g000009 Rmu_sc0017283.1_g000003 Rmu_sc0024481.1_g000001
rosa_roxburghii Rroxscaffold_1G00011240 Rroxscaffold_1G00011270 Rroxscaffold_1G00011280 Rroxscaffold_1G00011300 Rroxscaffold_1G00011310 Rroxscaffold_1G00011320 Rroxscaffold_4G00277590
rosa_rugosa Rorug01G0413100 Rorug01G0438500 Rorug01G0438600 Rorug04G0406800 Rorug05G0399300 Rorug05G0399400 Rorug05G0399500 Rorug05G0399600 Rorug05G0399700 Rorug05G0399900.1 Rorug05G0400000 Rorug05G0400100
rosa_samantha Rh1AG436100 Rh1AG464200 Rh1BG421500 Rh1CG434900 Rh1DG454100 Rh5AG034000 Rh5AG034100 Rh5AG456400 Rh5AG456500 Rh5AG456600 Rh5AG456800 Rh5AG457000 Rh5BG032600 Rh5BG475500 Rh5BG475600 Rh5BG475800 Rh5BG475900 Rh5CG036600 Rh5CG036700 Rh5CG499100 Rh5CG499200 Rh5CG499400 Rh5CG499600 Rh5DG032800 Rh5DG487000 Rh5DG487100 Rh5DG487200 Rh5DG487400 Rh5DG487500
rosa_wichuraiana Rw5G003130 Rw5G042610 Rw5G042630 Rw5G042650 Rw5G042660 Rw5G042670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 80
AccB1I GGYRCC 1 cut(s) 163
AccI GTMKAC 2 cut(s) 212, 941
AciI CCGC 1 cut(s) 1059
AclWI GGATC 3 cut(s) 59, 299, 972
AcsI RAATTY 5 cut(s) 404, 871, 1034, 1303, 1325
AcuI CTGAAG 1 cut(s) 834
AcvI CACGTG 1 cut(s) 947
AfaI GTAC 3 cut(s) 424, 456, 811
AfiI CCNNNNNNNGG 1 cut(s) 390
AflII CTTAAG 1 cut(s) 748
AflIII ACRYGT 1 cut(s) 944
AjuI GAANNNNNNNTTGG 2 cut(s) 1120, 1152
AluBI AGCT 9 cut(s) 273, 417, 523, 531, 784, 922, 1015, 1166, 1240
AluI AGCT 9 cut(s) 273, 417, 523, 531, 784, 922, 1015, 1166, 1240
Alw21I GWGCWC 3 cut(s) 369, 1242, 1272
Alw26I GTCTC 5 cut(s) 434, 442, 504, 1106, 1252
Alw44I GTGCAC 1 cut(s) 1268
AlwI GGATC 3 cut(s) 59, 299, 972
Ama87I CYCGRG 2 cut(s) 173, 758
AoxI GGCC 1 cut(s) 146
ApaLI GTGCAC 1 cut(s) 1268
ApeKI GCWGC 2 cut(s) 374, 570
ApoI RAATTY 5 cut(s) 404, 871, 1034, 1303, 1325
ArsI GACNNNNNNTTYG 2 cut(s) 678, 710
AseI ATTAAT 1 cut(s) 669
AspLEI GCGC 1 cut(s) 778
AspS9I GGNCC 1 cut(s) 643
AsuC2I CCSGG 5 cut(s) 260, 385, 759, 760, 1056
AsuHPI GGTGA 3 cut(s) 23, 617, 870
AvaI CYCGRG 2 cut(s) 173, 758
AvaII GGWCC 1 cut(s) 643
BaeGI GKGCMC 1 cut(s) 1272
BanI GGYRCC 1 cut(s) 163
BanII GRGCYC 1 cut(s) 1242
BauI CACGAG 1 cut(s) 121
BbrPI CACGTG 1 cut(s) 947
BbsI GAAGAC 1 cut(s) 750
Bbv12I GWGCWC 3 cut(s) 369, 1242, 1272
BbvI GCAGC 2 cut(s) 361, 557
BccI CCATC 4 cut(s) 522, 677, 800, 1277
BceAI ACGGC 1 cut(s) 411
BcgI CGANNNNNNTGC 2 cut(s) 1194, 1228
BcnI CCSGG 5 cut(s) 260, 385, 759, 760, 1056
BcoDI GTCTC 5 cut(s) 434, 442, 504, 1106, 1252
BfaI CTAG 3 cut(s) 266, 345, 932
BfmI CTRYAG 1 cut(s) 309
BfrI CTTAAG 1 cut(s) 748
BisI GCNGC 3 cut(s) 375, 571, 1060
BlsI GCNGC 3 cut(s) 376, 572, 1061
Bme1390I CCNGG 5 cut(s) 260, 385, 759, 760, 1056
Bme18I GGWCC 1 cut(s) 643
BmeT110I CYCGRG 2 cut(s) 173, 758
BmgT120I GGNCC 1 cut(s) 643
BmiI GGNNCC 2 cut(s) 165, 645
BmrFI CCNGG 5 cut(s) 260, 385, 759, 760, 1056
BmsI GCATC 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 750
BpuEI CTTGAG 4 cut(s) 302, 458, 539, 995
BpuMI CCSGG 5 cut(s) 260, 385, 759, 760, 1056
BsaAI YACGTR 1 cut(s) 947
BsaJI CCNNGG 3 cut(s) 258, 758, 881
BsaWI WCCGGW 1 cut(s) 484
Bsc4I CCNNNNNNNGG 1 cut(s) 390
Bse1I ACTGG 2 cut(s) 907, 1312
BseDI CCNNGG 3 cut(s) 258, 758, 881
BseLI CCNNNNNNNGG 1 cut(s) 390
BseMII CTCAG 1 cut(s) 177
BseNI ACTGG 2 cut(s) 907, 1312
BseSI GKGCMC 1 cut(s) 1272
BseXI GCAGC 2 cut(s) 361, 557
BshFI GGCC 1 cut(s) 148
BshNI GGYRCC 1 cut(s) 163
BsiHKAI GWGCWC 3 cut(s) 369, 1242, 1272
BsiHKCI CYCGRG 2 cut(s) 173, 758
BsiSI CCGG 6 cut(s) 260, 384, 485, 759, 779, 1055
BslFI GGGAC 5 cut(s) 400, 406, 629, 741, 1070
BslI CCNNNNNNNGG 1 cut(s) 390
BsmAI GTCTC 5 cut(s) 434, 442, 504, 1106, 1252
BsmBI CGTCTC 1 cut(s) 1252
BsmFI GGGAC 5 cut(s) 400, 406, 629, 741, 1070
BsmI GAATGC 1 cut(s) 778
BsnI GGCC 1 cut(s) 148
BsoBI CYCGRG 2 cut(s) 173, 758
Bsp1286I GDGCHC 3 cut(s) 369, 1242, 1272
Bsp143I GATC 3 cut(s) 51, 304, 964
BspACI CCGC 1 cut(s) 1059
BspANI GGCC 1 cut(s) 148
BspCNI CTCAG 1 cut(s) 178
BspLI GGNNCC 2 cut(s) 165, 645
BspPI GGATC 3 cut(s) 59, 299, 972
BspQI GCTCTTC 1 cut(s) 1230
BspT107I GGYRCC 1 cut(s) 163
BspTI CTTAAG 1 cut(s) 748
BsrI ACTGG 2 cut(s) 907, 1312
BssECI CCNNGG 3 cut(s) 258, 758, 881
BssMI GATC 3 cut(s) 51, 304, 964
BssNAI GTATAC 2 cut(s) 213, 942
BssSI CACGAG 1 cut(s) 121
BssT1I CCWWGG 1 cut(s) 881
Bst1107I GTATAC 2 cut(s) 213, 942
Bst2BI CACGAG 1 cut(s) 121
Bst4CI ACNGT 3 cut(s) 90, 210, 861
Bst6I CTCTTC 5 cut(s) 484, 650, 1138, 1146, 1230
BstAFI CTTAAG 1 cut(s) 748
BstBAI YACGTR 1 cut(s) 947
BstDEI CTNAG 3 cut(s) 186, 503, 1359
BstHHI GCGC 1 cut(s) 778
BstKTI GATC 3 cut(s) 54, 307, 967
BstMAI GTCTC 5 cut(s) 434, 442, 504, 1106, 1252
BstMBI GATC 3 cut(s) 51, 304, 964
BstSCI CCNGG 5 cut(s) 258, 383, 757, 758, 1054
BstSFI CTRYAG 1 cut(s) 309
BstSLI GKGCMC 1 cut(s) 1272
BstV1I GCAGC 2 cut(s) 361, 557
BstV2I GAAGAC 1 cut(s) 750
BstX2I RGATCY 1 cut(s) 964
BstYI RGATCY 1 cut(s) 964
BstZ17I GTATAC 2 cut(s) 213, 942
BsuRI GGCC 1 cut(s) 148
BtsIMutI CAGTG 2 cut(s) 61, 1017
CfoI GCGC 1 cut(s) 778
Cfr13I GGNCC 1 cut(s) 643
Cfr9I CCCGGG 1 cut(s) 758
Csp6I GTAC 3 cut(s) 423, 455, 810
CviAII CATG 4 cut(s) 680, 979, 1308, 1343
CviQI GTAC 3 cut(s) 423, 455, 810
DdeI CTNAG 3 cut(s) 186, 503, 1359
DpnI GATC 3 cut(s) 53, 306, 966
DpnII GATC 3 cut(s) 51, 304, 964
Eam1104I CTCTTC 5 cut(s) 484, 650, 1138, 1146, 1230
EarI CTCTTC 5 cut(s) 484, 650, 1138, 1146, 1230
Ecl136II GAGCTC 1 cut(s) 1240
Eco130I CCWWGG 1 cut(s) 881
Eco147I AGGCCT 1 cut(s) 148
Eco24I GRGCYC 1 cut(s) 1242
Eco32I GATATC 2 cut(s) 475, 842
Eco47I GGWCC 1 cut(s) 643
Eco53kI GAGCTC 1 cut(s) 1240
Eco57I CTGAAG 1 cut(s) 834
Eco72I CACGTG 1 cut(s) 947
Eco88I CYCGRG 2 cut(s) 173, 758
EcoICRI GAGCTC 1 cut(s) 1240
EcoO109I RGGNCCY 1 cut(s) 643
EcoRV GATATC 2 cut(s) 475, 842
EcoT14I CCWWGG 1 cut(s) 881
EcoT38I GRGCYC 1 cut(s) 1242
ErhI CCWWGG 1 cut(s) 881
Esp3I CGTCTC 1 cut(s) 1252
FaeI CATG 4 cut(s) 683, 982, 1311, 1346
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 5 cut(s) 400, 406, 629, 741, 1070
FatI CATG 4 cut(s) 679, 978, 1307, 1342
FblI GTMKAC 2 cut(s) 212, 941
Fnu4HI GCNGC 3 cut(s) 375, 571, 1060
FriOI GRGCYC 1 cut(s) 1242
Fsp4HI GCNGC 3 cut(s) 375, 571, 1060
FspBI CTAG 3 cut(s) 266, 345, 932
GlaI GCGC 1 cut(s) 777
GluI GCNGC 3 cut(s) 375, 571, 1060
HaeIII GGCC 1 cut(s) 148
HapII CCGG 6 cut(s) 260, 384, 485, 759, 779, 1055
HhaI GCGC 1 cut(s) 778
Hin1II CATG 4 cut(s) 683, 982, 1311, 1346
Hin6I GCGC 1 cut(s) 776
HinP1I GCGC 1 cut(s) 776
HincII GTYRAC 1 cut(s) 1228
HindII GTYRAC 1 cut(s) 1228
HpaI GTTAAC 1 cut(s) 1228
HpaII CCGG 6 cut(s) 260, 384, 485, 759, 779, 1055
HphI GGTGA 3 cut(s) 23, 617, 870
Hpy166II GTNNAC 5 cut(s) 213, 423, 942, 1228, 1270
Hpy188I TCNGA 8 cut(s) 187, 223, 295, 411, 616, 771, 1234, 1351
Hpy188III TCNNGA 8 cut(s) 173, 266, 281, 345, 518, 581, 932, 1213
Hpy8I GTNNAC 5 cut(s) 213, 423, 942, 1228, 1270
Hpy99I CGWCG 1 cut(s) 200
HpyAV CCTTC 2 cut(s) 657, 729
HpyCH4III ACNGT 3 cut(s) 90, 210, 861
HpyCH4IV ACGT 2 cut(s) 946, 1261
HpyCH4V TGCA 3 cut(s) 234, 429, 1270
HpyF3I CTNAG 3 cut(s) 186, 503, 1359
HpySE526I ACGT 2 cut(s) 946, 1261
Hsp92II CATG 4 cut(s) 683, 982, 1311, 1346
HspAI GCGC 1 cut(s) 776
KspAI GTTAAC 1 cut(s) 1228
Kzo9I GATC 3 cut(s) 51, 304, 964
LguI GCTCTTC 1 cut(s) 1230
LmnI GCTCC 2 cut(s) 721, 781
Lsp1109I GCAGC 2 cut(s) 361, 557
LweI GCATC 1 cut(s) 58
MaeI CTAG 3 cut(s) 266, 345, 932
MaeII ACGT 2 cut(s) 946, 1261
MaeIII GTNAC 1 cut(s) 554
MalI GATC 3 cut(s) 53, 306, 966
MboI GATC 3 cut(s) 51, 304, 964
MflI RGATCY 1 cut(s) 964
MhlI GDGCHC 3 cut(s) 369, 1242, 1272
MlyI GAGTC 3 cut(s) 444, 502, 1346
MmeI TCCRAC 2 cut(s) 125, 310
MnlI CCTC 7 cut(s) 138, 159, 181, 596, 616, 634, 784
MseI TTAA 4 cut(s) 662, 669, 749, 1227
MslI CAYNNNNRTG 3 cut(s) 354, 1044, 1120
MspA1I CMGCKG 1 cut(s) 922
MspCI CTTAAG 1 cut(s) 748
MspI CCGG 6 cut(s) 260, 384, 485, 759, 779, 1055
MspR9I CCNGG 5 cut(s) 260, 385, 759, 760, 1056
Mva1269I GAATGC 1 cut(s) 778
NciI CCSGG 5 cut(s) 260, 385, 759, 760, 1056
NdeII GATC 3 cut(s) 51, 304, 964
NlaIII CATG 4 cut(s) 683, 982, 1311, 1346
NlaIV GGNNCC 2 cut(s) 165, 645
PaeR7I CTCGAG 1 cut(s) 173
PceI AGGCCT 1 cut(s) 148
PciSI GCTCTTC 1 cut(s) 1230
PctI GAATGC 1 cut(s) 778
PfeI GAWTC 7 cut(s) 182, 290, 463, 542, 598, 611, 1131
PkrI GCNGC 3 cut(s) 376, 572, 1061
PleI GAGTC 3 cut(s) 444, 502, 1346
PmaCI CACGTG 1 cut(s) 947
PmlI CACGTG 1 cut(s) 947
PpsI GAGTC 3 cut(s) 444, 502, 1346
Ppu21I YACGTR 1 cut(s) 947
PpuMI RGGWCCY 1 cut(s) 643
PshBI ATTAAT 1 cut(s) 669
PsiI TTATAA 1 cut(s) 80
Psp124BI GAGCTC 1 cut(s) 1242
Psp5II RGGWCCY 1 cut(s) 643
PspCI CACGTG 1 cut(s) 947
PspN4I GGNNCC 2 cut(s) 165, 645
PspPI GGNCC 1 cut(s) 643
PspPPI RGGWCCY 1 cut(s) 643
PsuI RGATCY 1 cut(s) 964
PvuII CAGCTG 1 cut(s) 922
RsaI GTAC 3 cut(s) 424, 456, 811
RsaNI GTAC 3 cut(s) 423, 455, 810
RseI CAYNNNNRTG 3 cut(s) 354, 1044, 1120
SacI GAGCTC 1 cut(s) 1242
SapI GCTCTTC 1 cut(s) 1230
SaqAI TTAA 4 cut(s) 662, 669, 749, 1227
SatI GCNGC 3 cut(s) 375, 571, 1060
Sau3AI GATC 3 cut(s) 51, 304, 964
Sau96I GGNCC 1 cut(s) 643
SchI GAGTC 3 cut(s) 444, 502, 1346
ScrFI CCNGG 5 cut(s) 260, 385, 759, 760, 1056
SduI GDGCHC 3 cut(s) 369, 1242, 1272
SfaNI GCATC 1 cut(s) 58
SfcI CTRYAG 1 cut(s) 309
Sfr274I CTCGAG 1 cut(s) 173
SinI GGWCC 1 cut(s) 643
SlaI CTCGAG 1 cut(s) 173
SmaI CCCGGG 1 cut(s) 760
SmiMI CAYNNNNRTG 3 cut(s) 354, 1044, 1120
SmlI CTYRAG 6 cut(s) 173, 281, 437, 518, 748, 1010
SmoI CTYRAG 6 cut(s) 173, 281, 437, 518, 748, 1010
SseBI AGGCCT 1 cut(s) 148
SsiI CCGC 1 cut(s) 1059
SspI AATATT 1 cut(s) 799
SspMI CTAG 3 cut(s) 266, 345, 932
SstI GAGCTC 1 cut(s) 1242
StuI AGGCCT 1 cut(s) 148
StyD4I CCNGG 5 cut(s) 258, 383, 757, 758, 1054
StyI CCWWGG 1 cut(s) 881
TaaI ACNGT 3 cut(s) 90, 210, 861
TaiI ACGT 2 cut(s) 949, 1264
TaqI TCGA 8 cut(s) 174, 180, 601, 984, 1134, 1214, 1242, 1329
TatI WGTACW 1 cut(s) 422
TauI GCSGC 1 cut(s) 1062
TfiI GAWTC 7 cut(s) 182, 290, 463, 542, 598, 611, 1131
Tru1I TTAA 4 cut(s) 662, 669, 749, 1227
Tru9I TTAA 4 cut(s) 662, 669, 749, 1227
TscAI CASTG 2 cut(s) 61, 1024
TseI GCWGC 2 cut(s) 374, 570
TspDTI ATGAA 3 cut(s) 509, 1028, 1296
TspGWI ACGGA 1 cut(s) 542
TspMI CCCGGG 1 cut(s) 758
TspRI CASTG 2 cut(s) 61, 1024
Vha464I CTTAAG 1 cut(s) 748
VneI GTGCAC 1 cut(s) 1268
VpaK11BI GGWCC 1 cut(s) 643
VspI ATTAAT 1 cut(s) 669
XapI RAATTY 5 cut(s) 404, 871, 1034, 1303, 1325
XbaI TCTAGA 3 cut(s) 265, 344, 931
XhoI CTCGAG 1 cut(s) 173
XmaI CCCGGG 1 cut(s) 758
XmiI GTMKAC 2 cut(s) 212, 941
XspI CTAG 3 cut(s) 266, 345, 932
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.