Rh5CG499400

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000140
Physical Location & Seq
Forward (+)
69436806 .. 69454737
17932 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG499400.1

Sequence Viewer

Length: 2103 bp
ATGCTAAGACGTAATGTTGAAGAGCTTATACTTCGCCTGTCTAACTCTAAGGAGCTTTCACTGCCTCGTTCTTTATTTACTTCTGCAACACTCACGTACTTGGACATAATTGTGCCCTGTATTTTCAAAGTTCCTTCTACTGTTTGTCTATCAAGTTTAAGGATGTTGAGACTTCAATGCGTGGTGTTTTCTGATGACTGCTCAACCCAGCAGCTGTTTTCGGGTTGTCCAGTCCTTGAGGACTTGATACTAGGAGAATGCAGCTGGGGCAATTGCAAGTTTGTGAGTATTTGTGCCCCGAAACTTTTGAGATTGGAAATTGATGAAGACATTGACTTTTATCCCAAAGGTTCAGATGGTTGCCAGATTATGATATTTGGTGTTAGTCTCACAAACTTTTATTACTCGGGTGAATTCCGAAATCATTATTGCTTCAATAACTCGTCAGTAGATAAGGCTCGTATTTTTCATTTCTCTAATGAGAAGTCGAGGCATATGAGTTATGGGTTTAATAAGCTTCTTGGAGGACTATCTAGTGTAAAGAAACTAGCTATCAATTCTGATTCCCTTGAGGTGATTCAGATTCATGCAACAGAACTGCTTACCCAGATGCCCCTGTTGAATCACCTAACCACTTTGAAATTGGAAGCAGAGGAAGTAGTTCCCTGTAGCAAAGCACTATTGAGAATGCTTGGAAACTGTCCTTGCCTTCAAACTCTGATATTCTTTCAGGAGATTAACCTGTCCTCAGATGATGCTAACAACGATGGGGTGTTGGAGCCACTGCCTCCATGTTTCCTGACTGGTGTTAAACAGATTGAAGTTCGTGCATTCTATGGAGACGAGAATAATCTTTGTGCAATAAAGATTTTGCTAAAGAATGCCATGGTCTTGGAGAAGATGATCTTAACTTGCATGCACAATTTTGTTGGAGGATCAGAGAAGAAAAAGGATGTTAACAAACAGCTATCAGATCTCCCAAAAGGGTCAGAAAGCTTTATGGCATCTGATATGAGGCACAGAAGAGGAAAAAGATTGTTGCAACAAAATGATAGTGAAGGTCTTAATCGTGACTCAGAGATAGAAACAAGAAACAACAGTGAGAATTTTTATACCATCCGAGCCCGAACTGATAGTGGGGGTTTTGGTACAGAGGGAATGCATCAAAGAAGATCAAGAAGGCCAAGACATGTTCCTGAACCTCCAATAACAGAGAAAAATTACACCTCTGAACACTTGAATAGAAGAGTTAGACCTGCTGAAGAAAACAACACTCTGTTGTTAAATGAAACTTCTGTTAACAGTGAAGATTCGCATGTTAGTCATACAGAGTGTAATTGGGAGAATATCAAGTTTGTGAGTATTTGTGCTCCTAAACTTCTGAGTTTGAGCATCGATGAAAGCGAGTTGCCAATTTCCAAAGGCTCAAATGTGTGTCAGATTATGGTGTTTGGAGCTAGTCTGGCATATTTTTATTACTCAGGTCAGTTGCTGAATGACTATTGTTTGTGTAACTCATCAGTACATGAGGCTCATATTAGTATTGATGATACAAAGGGCTCCAGACTTGATAGTTACCTGTTGCATAAGCTTCTTAGAGGGCTCTCTACTGTGAAGAGCCTAACTATATTTCATCAGAACTTTGAGGTGGCTCTAACTGGTGCATCAGAACTTCTTGCCCAGATGCCCATGTTCAATGATCTAACCACCTTGATATTCGACGGGAGTGTGATAGAACTTGATAGTATGGTACTATTGAGGATACTCCAAAACTGTCCTTGTCTTAGGGATCTGTCATTTCATGAGGGGGTTAGGCTGTGCTCAGATGATGCAAAAGATGATGGGAATCATGGGATGTTGGATATTCCACTGCCTCCATGTTTCTCGACCAGTCTTAAAGAGATTGGAGTCACTGAATTTTGTGGAAACCAGAATGAGCTTCGTGCATTAAGGATTTTGCTAAAGAATGCAATTGTCTTGGAGAATATGTTTGTAAGCTACCGCGGTACCCTAGAAGGAAATACAGAGAAGAAAAGGGATCTTAACAAACAGATATCAGATCTCCCAAAAGGGTCACAAAGCTGTGAAATTGATTGTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

700

Amino Acids

78.79

Weight (kDa)

5.72

Isoelectric Point (pI)

52.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 3 - 103 2.1e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05080 AT1G19410 AT1G22000 AT1G26815 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G32375 AT1G32375 AT1G50980 AT1G51055 AT1G55030 AT1G55030 AT1G55660 AT1G55660 AT2G04230 AT2G26860 AT2G26860 AT3G10750 AT3G26920 AT3G26920 AT3G26920 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26930 AT3G26930 AT3G49020 AT3G49030 AT3G49030 AT3G49040 AT3G49045 AT3G49480 AT3G49480 AT3G50710 AT3G51530 AT3G52680 AT3G52680 AT3G52690 AT3G53550 AT3G54910 AT3G54910 AT3G54910 AT3G55670 AT4G00160 AT4G00315 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G10400 AT4G10400 AT4G10400 AT4G10410 AT4G10420 AT4G13965 AT4G15060 AT4G15060 AT4G15075 AT4G26340 AT4G26350 AT5G11370 AT5G38565 AT5G38570 AT5G38580 AT5G38590 AT5G38590 AT5G38590 AT5G38590 AT5G40750 AT5G44850 AT5G50270 AT5G50270 AT5G52460 AT5G52460 AT5G56325 AT5G56370 AT5G56370 AT5G56370 AT5G56380 AT5G56380 AT5G56390 AT5G56400 AT5G56410 AT5G56420 AT5G56420 AT5G56420 AT5G56430 AT5G56440 AT5G56452 AT5G56452 AT5G56555 AT5G56560 AT5G56560 AT5G56570 AT5G56690 AT5G56700 AT5G56700 AT5G56800 AT5G56810 AT5G56810 AT5G56820 AT5G60610 AT5G60610 AT5G62970
malus_domestica MD10G1316000.v1.1
prunus_persica Prupe.4G024600_v2.0.a1
pyrus_communis pycom10g26820
rosa_chinensis RchiOBHm_Chr1g0383101 RchiOBHm_Chr5g0003811 RchiOBHm_Chr5g0069761 RchiOBHm_Chr5g0069771 RchiOBHm_Chr5g0069781 RchiOBHm_Chr5g0069791 RchiOBHm_Chr5g0069821 RchiOBHm_Chr5g0069831
rosa_laevigata RLG00000026130 RLG00000026375 RLG00000031193 RLG00000036088 RLG00000036089 RLG00000036090 RLG00000036095 RLG00000036096 RLG00000036097 RLG00000036099 RLG00000036100
rosa_multiflora Rmu_co8192842.1_g000001 Rmu_co8209784.1_g000001 Rmu_sc0000726.1_g000001 Rmu_sc0000726.1_g000003 Rmu_sc0000726.1_g000007 Rmu_sc0000726.1_g000008 Rmu_sc0000738.1_g000009 Rmu_sc0000738.1_g000010 Rmu_sc0000738.1_g000011 Rmu_sc0000738.1_g000015 Rmu_sc0000738.1_g000018 Rmu_sc0000738.1_g000019 Rmu_sc0004212.1_g000009 Rmu_sc0017283.1_g000003 Rmu_sc0024481.1_g000001
rosa_roxburghii Rroxscaffold_1G00011240 Rroxscaffold_1G00011270 Rroxscaffold_1G00011280 Rroxscaffold_1G00011300 Rroxscaffold_1G00011310 Rroxscaffold_1G00011320 Rroxscaffold_4G00277590
rosa_rugosa Rorug01G0413100 Rorug01G0438500 Rorug01G0438600 Rorug04G0406800 Rorug05G0399300 Rorug05G0399400 Rorug05G0399500 Rorug05G0399600 Rorug05G0399700 Rorug05G0399900.1 Rorug05G0400000 Rorug05G0400100
rosa_samantha Rh1AG436100 Rh1AG464200 Rh1BG421500 Rh1CG434900 Rh1DG454100 Rh5AG034000 Rh5AG034100 Rh5AG456400 Rh5AG456500 Rh5AG456600 Rh5AG456800 Rh5AG457000 Rh5BG032600 Rh5BG475500 Rh5BG475600 Rh5BG475800 Rh5BG475900 Rh5CG036600 Rh5CG036700 Rh5CG499100 Rh5CG499200 Rh5CG499400 Rh5CG499600 Rh5DG032800 Rh5DG487000 Rh5DG487100 Rh5DG487200 Rh5DG487400 Rh5DG487500
rosa_wichuraiana Rw5G003130 Rw5G042610 Rw5G042630 Rw5G042650 Rw5G042660 Rw5G042670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1264
Acc65I GGTACC 1 cut(s) 2006
AccB1I GGYRCC 1 cut(s) 2006
AccII CGCG 1 cut(s) 2004
AciI CCGC 2 cut(s) 2002, 2004
AclWI GGATC 3 cut(s) 943, 1797, 2046
AcsI RAATTY 3 cut(s) 413, 1105, 1916
AcuI CTGAAG 1 cut(s) 1281
AfaI GTAC 5 cut(s) 98, 1150, 1524, 1752, 2008
AflIII ACRYGT 1 cut(s) 1189
Alw21I GWGCWC 2 cut(s) 1372, 1823
Alw26I GTCTC 3 cut(s) 163, 392, 834
AlwI GGATC 3 cut(s) 943, 1797, 2046
AlwNI CAGNNNCTG 2 cut(s) 214, 1492
Ama87I CYCGRG 1 cut(s) 406
AoxI GGCC 1 cut(s) 1181
ApeKI GCWGC 2 cut(s) 211, 261
ApoI RAATTY 3 cut(s) 413, 1105, 1916
Asp700I GAANNNNTTC 1 cut(s) 660
Asp718I GGTACC 1 cut(s) 2006
AsuHPI GGTGA 3 cut(s) 422, 586, 617
AvaI CYCGRG 1 cut(s) 406
BaeGI GKGCMC 2 cut(s) 117, 298
BaeI ACNNNNGTAYC 2 cut(s) 1990, 2023
BanI GGYRCC 1 cut(s) 2006
BanII GRGCYC 3 cut(s) 1126, 1562, 1605
BarI GAAGNNNNNNTAC 2 cut(s) 12, 44
BbsI GAAGAC 1 cut(s) 333
Bbv12I GWGCWC 2 cut(s) 1372, 1823
BbvI GCAGC 2 cut(s) 223, 273
BccI CCATC 4 cut(s) 350, 761, 1124, 1835
BciVI GTATCC 1 cut(s) 1755
BcoDI GTCTC 3 cut(s) 163, 392, 834
BfaI CTAG 5 cut(s) 251, 534, 548, 1458, 2012
BfmI CTRYAG 1 cut(s) 667
BfuAI ACCTGC 1 cut(s) 1264
BfuI GTATCC 1 cut(s) 1755
BglII AGATCT 2 cut(s) 973, 2059
BisI GCNGC 2 cut(s) 212, 262
BlsI GCNGC 2 cut(s) 213, 263
BmeT110I CYCGRG 1 cut(s) 406
BmiI GGNNCC 3 cut(s) 780, 1561, 2008
BmsI GCATC 8 cut(s) 600, 745, 1013, 1171, 1401, 1673, 1674, 1819
BpiI GAAGAC 1 cut(s) 333
BpmI CTGGAG 1 cut(s) 1546
BpuEI CTTGAG 2 cut(s) 257, 590
Bsa29I ATCGAT 1 cut(s) 1395
BsaAI YACGTR 1 cut(s) 96
BsaBI GATNNNNATC 1 cut(s) 1845
BsaJI CCNNGG 2 cut(s) 885, 2002
BsaXI ACNNNNNCTCC 2 cut(s) 1973, 2003
Bse1I ACTGG 4 cut(s) 230, 808, 1663, 1890
Bse8I GATNNNNATC 1 cut(s) 1845
BseCI ATCGAT 1 cut(s) 1395
BseDI CCNNGG 2 cut(s) 885, 2002
BseGI GGATG 4 cut(s) 168, 958, 1116, 1860
BseJI GATNNNNATC 1 cut(s) 1845
BseMII CTCAG 5 cut(s) 762, 1089, 1373, 1494, 1836
BseNI ACTGG 4 cut(s) 230, 808, 1663, 1890
BseSI GKGCMC 2 cut(s) 117, 298
BseXI GCAGC 2 cut(s) 223, 273
BseYI CCCAGC 2 cut(s) 207, 264
Bsh1236I CGCG 1 cut(s) 2004
BshFI GGCC 1 cut(s) 1183
BshNI GGYRCC 1 cut(s) 2006
BshVI ATCGAT 1 cut(s) 1395
BsiHKAI GWGCWC 2 cut(s) 1372, 1823
BsiHKCI CYCGRG 1 cut(s) 406
BsmAI GTCTC 3 cut(s) 163, 392, 834
BsmBI CGTCTC 1 cut(s) 834
BsmI GAATGC 6 cut(s) 263, 693, 830, 886, 1164, 1972
BsnI GGCC 1 cut(s) 1183
BsoBI CYCGRG 1 cut(s) 406
Bsp1286I GDGCHC 7 cut(s) 117, 298, 1126, 1372, 1562, 1605, 1823
Bsp143I GATC 8 cut(s) 903, 935, 973, 1172, 1699, 1789, 2038, 2059
Bsp19I CCATGG 1 cut(s) 885
BspACI CCGC 2 cut(s) 2002, 2004
BspANI GGCC 1 cut(s) 1183
BspCNI CTCAG 5 cut(s) 761, 1088, 1374, 1493, 1835
BspDI ATCGAT 1 cut(s) 1395
BspFNI CGCG 1 cut(s) 2004
BspHI TCATGA 1 cut(s) 1801
BspLI GGNNCC 3 cut(s) 780, 1561, 2008
BspMI ACCTGC 1 cut(s) 1264
BspPI GGATC 3 cut(s) 943, 1797, 2046
BspQI GCTCTTC 2 cut(s) 15, 1610
BspT107I GGYRCC 1 cut(s) 2006
BsrI ACTGG 4 cut(s) 230, 808, 1663, 1890
BssECI CCNNGG 2 cut(s) 885, 2002
BssMI GATC 8 cut(s) 903, 935, 973, 1172, 1699, 1789, 2038, 2059
BssT1I CCWWGG 1 cut(s) 885
Bst4CI ACNGT 6 cut(s) 142, 701, 1100, 1304, 1612, 1775
Bst6I CTCTTC 4 cut(s) 15, 1018, 1240, 1610
BstBAI YACGTR 1 cut(s) 96
BstC8I GCNNGC 1 cut(s) 917
BstDEI CTNAG 9 cut(s) 5, 48, 748, 1075, 1382, 1480, 1595, 1784, 1822
BstDSI CCRYGG 2 cut(s) 885, 2002
BstF5I GGATG 4 cut(s) 168, 958, 1116, 1860
BstFNI CGCG 1 cut(s) 2004
BstKTI GATC 8 cut(s) 906, 938, 976, 1175, 1702, 1792, 2041, 2062
BstMAI GTCTC 3 cut(s) 163, 392, 834
BstMBI GATC 8 cut(s) 903, 935, 973, 1172, 1699, 1789, 2038, 2059
BstMWI GCNNNNNNNGC 3 cut(s) 61, 267, 1463
BstNSI RCATGY 3 cut(s) 919, 1193, 1319
BstSFI CTRYAG 1 cut(s) 667
BstSLI GKGCMC 2 cut(s) 117, 298
BstUI CGCG 1 cut(s) 2004
BstV1I GCAGC 2 cut(s) 223, 273
BstV2I GAAGAC 1 cut(s) 333
BstX2I RGATCY 4 cut(s) 973, 1789, 2038, 2059
BstXI CCANNNNNNTGG 1 cut(s) 892
BstYI RGATCY 4 cut(s) 973, 1789, 2038, 2059
Bsu15I ATCGAT 1 cut(s) 1395
BsuI GTATCC 1 cut(s) 1755
BsuRI GGCC 1 cut(s) 1183
BsuTUI ATCGAT 1 cut(s) 1395
BtgI CCRYGG 2 cut(s) 885, 2002
BtsCI GGATG 4 cut(s) 168, 958, 1116, 1860
BtsI GCAGTG 3 cut(s) 59, 782, 1868
BtsIMutI CAGTG 6 cut(s) 59, 782, 1105, 1309, 1868, 1911
BveI ACCTGC 1 cut(s) 1264
Cac8I GCNNGC 1 cut(s) 917
CaiI CAGNNNCTG 2 cut(s) 214, 1492
CciI TCATGA 1 cut(s) 1801
Cfr42I CCGCGG 1 cut(s) 2005
ClaI ATCGAT 1 cut(s) 1395
Csp6I GTAC 5 cut(s) 97, 1149, 1523, 1751, 2007
CviQI GTAC 5 cut(s) 97, 1149, 1523, 1751, 2007
DdeI CTNAG 9 cut(s) 5, 48, 748, 1075, 1382, 1480, 1595, 1784, 1822
DpnI GATC 8 cut(s) 905, 937, 975, 1174, 1701, 1791, 2040, 2061
DpnII GATC 8 cut(s) 903, 935, 973, 1172, 1699, 1789, 2038, 2059
Eam1104I CTCTTC 4 cut(s) 15, 1018, 1240, 1610
EarI CTCTTC 4 cut(s) 15, 1018, 1240, 1610
Eco130I CCWWGG 1 cut(s) 885
Eco24I GRGCYC 3 cut(s) 1126, 1562, 1605
Eco32I GATATC 1 cut(s) 2055
Eco57I CTGAAG 1 cut(s) 1281
Eco88I CYCGRG 1 cut(s) 406
EcoRI GAATTC 1 cut(s) 413
EcoRV GATATC 1 cut(s) 2055
EcoT14I CCWWGG 1 cut(s) 885
EcoT22I ATGCAT 1 cut(s) 1164
EcoT38I GRGCYC 3 cut(s) 1126, 1562, 1605
ErhI CCWWGG 1 cut(s) 885
Esp3I CGTCTC 1 cut(s) 834
FalI AAGNNNNNCTT 2 cut(s) 890, 922
FauNDI CATATG 1 cut(s) 495
Fnu4HI GCNGC 2 cut(s) 212, 262
FokI GGATG 4 cut(s) 175, 965, 1103, 1867
FriOI GRGCYC 3 cut(s) 1126, 1562, 1605
Fsp4HI GCNGC 2 cut(s) 212, 262
FspBI CTAG 5 cut(s) 251, 534, 548, 1458, 2012
GluI GCNGC 2 cut(s) 212, 262
GsaI CCCAGC 2 cut(s) 211, 268
GsuI CTGGAG 1 cut(s) 1546
HaeIII GGCC 1 cut(s) 1183
HincII GTYRAC 2 cut(s) 958, 1300
HindII GTYRAC 2 cut(s) 958, 1300
HindIII AAGCTT 3 cut(s) 515, 994, 1589
HinfI GANTC 8 cut(s) 563, 577, 583, 622, 1073, 1310, 1846, 1908
HpaI GTTAAC 2 cut(s) 958, 1300
HphI GGTGA 3 cut(s) 422, 586, 617
Hpy166II GTNNAC 2 cut(s) 958, 1300
Hpy188III TCNNGA 8 cut(s) 731, 799, 1070, 1176, 1196, 1563, 1802, 1885
Hpy8I GTNNAC 2 cut(s) 958, 1300
Hpy99I CGWCG 1 cut(s) 1724
HpyAV CCTTC 5 cut(s) 144, 719, 1052, 1173, 2009
HpyCH4III ACNGT 6 cut(s) 142, 701, 1100, 1304, 1612, 1775
HpyCH4IV ACGT 2 cut(s) 10, 95
HpyF10VI GCNNNNNNNGC 3 cut(s) 61, 267, 1463
HpyF3I CTNAG 9 cut(s) 5, 48, 748, 1075, 1382, 1480, 1595, 1784, 1822
HpySE526I ACGT 2 cut(s) 10, 95
KpnI GGTACC 1 cut(s) 2010
KspAI GTTAAC 2 cut(s) 958, 1300
KspI CCGCGG 1 cut(s) 2005
Kzo9I GATC 8 cut(s) 903, 935, 973, 1172, 1699, 1789, 2038, 2059
LguI GCTCTTC 2 cut(s) 15, 1610
LmnI GCTCC 5 cut(s) 52, 778, 1375, 1454, 1565
Lsp1109I GCAGC 2 cut(s) 223, 273
LweI GCATC 8 cut(s) 600, 745, 1013, 1171, 1401, 1673, 1674, 1819
MaeI CTAG 5 cut(s) 251, 534, 548, 1458, 2012
MaeII ACGT 2 cut(s) 10, 95
MaeIII GTNAC 5 cut(s) 1070, 1511, 1574, 1909, 2073
MalI GATC 8 cut(s) 905, 937, 975, 1174, 1701, 1791, 2040, 2061
MboI GATC 8 cut(s) 903, 935, 973, 1172, 1699, 1789, 2038, 2059
MfeI CAATTG 2 cut(s) 271, 1971
MflI RGATCY 4 cut(s) 973, 1789, 2038, 2059
MhlI GDGCHC 7 cut(s) 117, 298, 1126, 1372, 1562, 1605, 1823
MlyI GAGTC 2 cut(s) 1067, 1917
MmeI TCCRAC 3 cut(s) 756, 910, 1839
Mph1103I ATGCAT 1 cut(s) 1164
MroXI GAANNNNTTC 1 cut(s) 660
MslI CAYNNNNRTG 1 cut(s) 110
MspA1I CMGCKG 3 cut(s) 214, 264, 2004
MunI CAATTG 2 cut(s) 271, 1971
Mva1269I GAATGC 6 cut(s) 263, 693, 830, 886, 1164, 1972
MvnI CGCG 1 cut(s) 2004
MwoI GCNNNNNNNGC 3 cut(s) 61, 267, 1463
NcoI CCATGG 1 cut(s) 885
NdeI CATATG 1 cut(s) 495
NdeII GATC 8 cut(s) 903, 935, 973, 1172, 1699, 1789, 2038, 2059
NlaIV GGNNCC 3 cut(s) 780, 1561, 2008
NmuCI GTSAC 3 cut(s) 1070, 1909, 2073
NsiI ATGCAT 1 cut(s) 1164
NspI RCATGY 3 cut(s) 919, 1193, 1319
PaeI GCATGC 1 cut(s) 919
PagI TCATGA 1 cut(s) 1801
PciI ACATGT 1 cut(s) 1189
PciSI GCTCTTC 2 cut(s) 15, 1610
PcsI WCGNNNNNNNCGW 1 cut(s) 1401
PctI GAATGC 6 cut(s) 263, 693, 830, 886, 1164, 1972
PdmI GAANNNNTTC 1 cut(s) 660
PfeI GAWTC 6 cut(s) 563, 577, 583, 622, 1310, 1846
PkrI GCNGC 2 cut(s) 213, 263
PleI GAGTC 2 cut(s) 1067, 1916
PpsI GAGTC 2 cut(s) 1067, 1916
Ppu21I YACGTR 1 cut(s) 96
PscI ACATGT 1 cut(s) 1189
PspFI CCCAGC 2 cut(s) 207, 264
PspN4I GGNNCC 3 cut(s) 780, 1561, 2008
PstNI CAGNNNCTG 2 cut(s) 214, 1492
PsuI RGATCY 4 cut(s) 973, 1789, 2038, 2059
PvuII CAGCTG 2 cut(s) 214, 264
RsaI GTAC 5 cut(s) 98, 1150, 1524, 1752, 2008
RsaNI GTAC 5 cut(s) 97, 1149, 1523, 1751, 2007
RseI CAYNNNNRTG 1 cut(s) 110
SacII CCGCGG 1 cut(s) 2005
SapI GCTCTTC 2 cut(s) 15, 1610
SatI GCNGC 2 cut(s) 212, 262
Sau3AI GATC 8 cut(s) 903, 935, 973, 1172, 1699, 1789, 2038, 2059
SchI GAGTC 2 cut(s) 1067, 1917
SduI GDGCHC 7 cut(s) 117, 298, 1126, 1372, 1562, 1605, 1823
SfaNI GCATC 8 cut(s) 600, 745, 1013, 1171, 1401, 1673, 1674, 1819
SfcI CTRYAG 1 cut(s) 667
Sfr303I CCGCGG 1 cut(s) 2005
SgrBI CCGCGG 1 cut(s) 2005
SmiMI CAYNNNNRTG 1 cut(s) 110
SmlI CTYRAG 2 cut(s) 236, 569
SmoI CTYRAG 2 cut(s) 236, 569
SphI GCATGC 1 cut(s) 919
SsiI CCGC 2 cut(s) 2002, 2004
SspMI CTAG 5 cut(s) 251, 534, 548, 1458, 2012
StyI CCWWGG 1 cut(s) 885
TaaI ACNGT 6 cut(s) 142, 701, 1100, 1304, 1612, 1775
TaiI ACGT 2 cut(s) 13, 98
TaqI TCGA 4 cut(s) 488, 1395, 1719, 1886
TatI WGTACW 1 cut(s) 1522
TfiI GAWTC 6 cut(s) 563, 577, 583, 622, 1310, 1846
TscAI CASTG 6 cut(s) 66, 789, 1105, 1309, 1875, 1918
TseFI GTSAC 3 cut(s) 1070, 1909, 2073
TseI GCWGC 2 cut(s) 211, 261
Tsp45I GTSAC 3 cut(s) 1070, 1909, 2073
TspDTI ATGAA 7 cut(s) 339, 458, 575, 1302, 1413, 1622, 1790
TspRI CASTG 6 cut(s) 66, 789, 1105, 1309, 1875, 1918
XapI RAATTY 3 cut(s) 413, 1105, 1916
XceI RCATGY 3 cut(s) 919, 1193, 1319
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XmnI GAANNNNTTC 1 cut(s) 660
XspI CTAG 5 cut(s) 251, 534, 548, 1458, 2012
Zsp2I ATGCAT 1 cut(s) 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.