AT4G10410

microtubule motor activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000140
Physical Location & Seq
Reverse (-)
6448983 .. 6449998
1016 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G10410.1

Sequence Viewer

Length: 792 bp
ATGTCGTTAGCTCCGACTAAAGTTGCTGTATCAACTAGTATCTTGTCGAAACGATGGGAGTTTCTTTGGATGTGGTTGACGAAACTTGAGTTTGGTGATGAACTTTATTCAGAGTCTGAATTCAAGAGTTTACAGTGTTTTCTTGATAGAAATCTGCCATTACATAGAGCTCCAGTTATAGAAAGCTTCCGTCTTGAGCTTAGTGGTTTATATTTTAACCCTGAAGATATCAGAATGTGGGTTGTAGTAGTTGTTTCTCGCTACGTACGTGAGCTGGAGATTTACTGTCCAGAGAAGCAACACATATTGCCAAGTAGCTTGTATACCTGCAAGTCTCTCGTGATCTTGAAACTCGATGGTGGGATTATCTTGGATGTTCCTCCGATGGTTTGTCTTCCCTCTCTGAGAACTTTGGAACTTAAAGGTTATACTTGTGATGTAGATGAGTTTGTCATAGATACTCCTTCTTTAGAGTATTTCAAACTTGAGGATCGTAATTATGATAGTCACCCATGTTTGATCGAGAATATGCCTAAGCTAACGGTAGCATACGTCGATGTTAGATCCACTGATCTTCAGAGTCTCATCGGATCAATCACTTCTGTCAAGTATCTAACAATATCCTCTAAGGCTATGTTTGGTGACGGTTTTATTTTCAACCACCTTGAGCATCTGACGCTACCTGTATGGGATGATTATCCGTGGAATGTCCTTGTCCAGGTCCTCAAAGACTCTCCTAACTTACGTGAACTAAGCTGCCTCTCTGAAATGAATGTAAGTTCCTTCGTTTAA

Protein Analysis

263

Amino Acids

30.34

Weight (kDa)

4.95

Isoelectric Point (pI)

55.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05080 AT1G19410 AT1G22000 AT1G26815 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G32375 AT1G32375 AT1G50980 AT1G51055 AT1G55030 AT1G55030 AT1G55660 AT1G55660 AT2G04230 AT2G26860 AT2G26860 AT3G10750 AT3G26920 AT3G26920 AT3G26920 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26930 AT3G26930 AT3G49020 AT3G49030 AT3G49030 AT3G49040 AT3G49045 AT3G49480 AT3G49480 AT3G50710 AT3G51530 AT3G52680 AT3G52680 AT3G52690 AT3G53550 AT3G54910 AT3G54910 AT3G54910 AT3G55670 AT4G00160 AT4G00315 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G10400 AT4G10400 AT4G10400 AT4G10410 AT4G10420 AT4G13965 AT4G15060 AT4G15060 AT4G15075 AT4G26340 AT4G26350 AT5G11370 AT5G38565 AT5G38570 AT5G38580 AT5G38590 AT5G38590 AT5G38590 AT5G38590 AT5G40750 AT5G44850 AT5G50270 AT5G50270 AT5G52460 AT5G52460 AT5G56325 AT5G56370 AT5G56370 AT5G56370 AT5G56380 AT5G56380 AT5G56390 AT5G56400 AT5G56410 AT5G56420 AT5G56420 AT5G56420 AT5G56430 AT5G56440 AT5G56452 AT5G56452 AT5G56555 AT5G56560 AT5G56560 AT5G56570 AT5G56690 AT5G56700 AT5G56700 AT5G56800 AT5G56810 AT5G56810 AT5G56820 AT5G60610 AT5G60610 AT5G62970
malus_domestica MD10G1316000.v1.1
prunus_persica Prupe.4G024600_v2.0.a1
pyrus_communis pycom10g26820
rosa_chinensis RchiOBHm_Chr1g0383101 RchiOBHm_Chr5g0003811 RchiOBHm_Chr5g0069761 RchiOBHm_Chr5g0069771 RchiOBHm_Chr5g0069781 RchiOBHm_Chr5g0069791 RchiOBHm_Chr5g0069821 RchiOBHm_Chr5g0069831
rosa_laevigata RLG00000026130 RLG00000026375 RLG00000031193 RLG00000036088 RLG00000036089 RLG00000036090 RLG00000036095 RLG00000036096 RLG00000036097 RLG00000036099 RLG00000036100
rosa_multiflora Rmu_co8192842.1_g000001 Rmu_co8209784.1_g000001 Rmu_sc0000726.1_g000001 Rmu_sc0000726.1_g000003 Rmu_sc0000726.1_g000007 Rmu_sc0000726.1_g000008 Rmu_sc0000738.1_g000009 Rmu_sc0000738.1_g000010 Rmu_sc0000738.1_g000011 Rmu_sc0000738.1_g000015 Rmu_sc0000738.1_g000018 Rmu_sc0000738.1_g000019 Rmu_sc0004212.1_g000009 Rmu_sc0017283.1_g000003 Rmu_sc0024481.1_g000001
rosa_roxburghii Rroxscaffold_1G00011240 Rroxscaffold_1G00011270 Rroxscaffold_1G00011280 Rroxscaffold_1G00011300 Rroxscaffold_1G00011310 Rroxscaffold_1G00011320 Rroxscaffold_4G00277590
rosa_rugosa Rorug01G0413100 Rorug01G0438500 Rorug01G0438600 Rorug04G0406800 Rorug05G0399300 Rorug05G0399400 Rorug05G0399500 Rorug05G0399600 Rorug05G0399700 Rorug05G0399900.1 Rorug05G0400000 Rorug05G0400100
rosa_samantha Rh1AG436100 Rh1AG464200 Rh1BG421500 Rh1CG434900 Rh1DG454100 Rh5AG034000 Rh5AG034100 Rh5AG456400 Rh5AG456500 Rh5AG456600 Rh5AG456800 Rh5AG457000 Rh5BG032600 Rh5BG475500 Rh5BG475600 Rh5BG475800 Rh5BG475900 Rh5CG036600 Rh5CG036700 Rh5CG499100 Rh5CG499200 Rh5CG499400 Rh5CG499600 Rh5DG032800 Rh5DG487000 Rh5DG487100 Rh5DG487200 Rh5DG487400 Rh5DG487500
rosa_wichuraiana Rw5G003130 Rw5G042610 Rw5G042630 Rw5G042650 Rw5G042660 Rw5G042670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 335
AccI GTMKAC 1 cut(s) 323
AclWI GGATC 3 cut(s) 498, 558, 598
AcsI RAATTY 1 cut(s) 119
AcuI CTGAAG 2 cut(s) 243, 560
AfaI GTAC 1 cut(s) 267
AfiI CCNNNNNNNGG 1 cut(s) 718
AgsI TTSAA 4 cut(s) 124, 349, 481, 658
AhlI ACTAGT 1 cut(s) 35
AjnI CCWGG 1 cut(s) 717
AluBI AGCT 8 cut(s) 11, 170, 186, 199, 274, 318, 538, 756
AluI AGCT 8 cut(s) 11, 170, 186, 199, 274, 318, 538, 756
Alw21I GWGCWC 1 cut(s) 172
Alw26I GTCTC 2 cut(s) 339, 587
AlwI GGATC 3 cut(s) 498, 558, 598
AlwNI CAGNNNCTG 1 cut(s) 116
ApeKI GCWGC 1 cut(s) 756
ApoI RAATTY 1 cut(s) 119
AspS9I GGNCC 1 cut(s) 721
AsuHPI GGTGA 3 cut(s) 107, 500, 653
AvaII GGWCC 1 cut(s) 721
BanII GRGCYC 1 cut(s) 172
BauI CACGAG 1 cut(s) 338
BbsI GAAGAC 1 cut(s) 386
Bbv12I GWGCWC 1 cut(s) 172
BbvI GCAGC 1 cut(s) 743
BccI CCATC 3 cut(s) 48, 350, 379
BcgI CGANNNNNNTGC 2 cut(s) 319, 353
BciT130I CCWGG 1 cut(s) 719
BcoDI GTCTC 2 cut(s) 339, 587
BcuI ACTAGT 1 cut(s) 35
BfaI CTAG 1 cut(s) 36
BfuAI ACCTGC 1 cut(s) 335
BisI GCNGC 1 cut(s) 757
BlsI GCNGC 1 cut(s) 758
Bme1390I CCNGG 1 cut(s) 719
Bme18I GGWCC 1 cut(s) 721
BmgT120I GGNCC 1 cut(s) 721
BmrFI CCNGG 1 cut(s) 719
BmsI GCATC 1 cut(s) 679
BpiI GAAGAC 1 cut(s) 386
BpmI CTGGAG 2 cut(s) 156, 296
Bpu10I CCTNAGC 1 cut(s) 534
BpuEI CTTGAG 4 cut(s) 107, 215, 506, 686
BsaAI YACGTR 3 cut(s) 265, 269, 746
BsaBI GATNNNNATC 2 cut(s) 150, 696
BsaJI CCNNGG 1 cut(s) 701
Bsc4I CCNNNNNNNGG 1 cut(s) 718
Bse1I ACTGG 1 cut(s) 173
Bse8I GATNNNNATC 2 cut(s) 150, 696
BseBI CCWGG 1 cut(s) 719
BseDI CCNNGG 1 cut(s) 701
BseGI GGATG 3 cut(s) 75, 379, 697
BseJI GATNNNNATC 2 cut(s) 150, 696
BseLI CCNNNNNNNGG 1 cut(s) 718
BseMII CTCAG 1 cut(s) 395
BseNI ACTGG 1 cut(s) 173
BseXI GCAGC 1 cut(s) 743
BsiHKAI GWGCWC 1 cut(s) 172
BsiWI CGTACG 1 cut(s) 265
BslI CCNNNNNNNGG 1 cut(s) 718
BsmAI GTCTC 2 cut(s) 339, 587
Bsp1286I GDGCHC 1 cut(s) 172
Bsp143I GATC 6 cut(s) 342, 490, 519, 563, 571, 590
BspCNI CTCAG 1 cut(s) 396
BspMI ACCTGC 1 cut(s) 335
BspPI GGATC 3 cut(s) 498, 558, 598
BsrI ACTGG 1 cut(s) 173
BssECI CCNNGG 1 cut(s) 701
BssMI GATC 6 cut(s) 342, 490, 519, 563, 571, 590
BssNAI GTATAC 1 cut(s) 324
BssSI CACGAG 1 cut(s) 338
Bst1107I GTATAC 1 cut(s) 324
Bst2BI CACGAG 1 cut(s) 338
Bst2UI CCWGG 1 cut(s) 719
Bst4CI ACNGT 4 cut(s) 135, 287, 544, 647
BstBAI YACGTR 3 cut(s) 265, 269, 746
BstDEI CTNAG 5 cut(s) 200, 404, 534, 627, 752
BstDSI CCRYGG 1 cut(s) 701
BstENI CCTNNNNNAGG 1 cut(s) 716
BstF5I GGATG 3 cut(s) 75, 379, 697
BstKTI GATC 6 cut(s) 345, 493, 522, 566, 574, 593
BstMAI GTCTC 2 cut(s) 339, 587
BstMBI GATC 6 cut(s) 342, 490, 519, 563, 571, 590
BstMWI GCNNNNNNNGC 1 cut(s) 676
BstNI CCWGG 1 cut(s) 719
BstSCI CCNGG 1 cut(s) 717
BstSNI TACGTA 1 cut(s) 265
BstV1I GCAGC 1 cut(s) 743
BstV2I GAAGAC 1 cut(s) 386
BstX2I RGATCY 1 cut(s) 563
BstYI RGATCY 1 cut(s) 563
BstZ17I GTATAC 1 cut(s) 324
BtgI CCRYGG 1 cut(s) 701
BtsCI GGATG 3 cut(s) 75, 379, 697
BtsIMutI CAGTG 2 cut(s) 140, 567
BveI ACCTGC 1 cut(s) 335
CaiI CAGNNNCTG 1 cut(s) 116
Cfr13I GGNCC 1 cut(s) 721
CseI GACGC 1 cut(s) 685
Csp6I GTAC 1 cut(s) 266
CviAII CATG 1 cut(s) 513
CviJI RGCY 9 cut(s) 11, 170, 186, 199, 274, 318, 538, 632, 756
CviKI_1 RGCY 9 cut(s) 11, 170, 186, 199, 274, 318, 538, 632, 756
CviQI GTAC 1 cut(s) 266
DdeI CTNAG 5 cut(s) 200, 404, 534, 627, 752
DpnI GATC 6 cut(s) 344, 492, 521, 565, 573, 592
DpnII GATC 6 cut(s) 342, 490, 519, 563, 571, 590
Ecl136II GAGCTC 1 cut(s) 170
Eco105I TACGTA 1 cut(s) 265
Eco24I GRGCYC 1 cut(s) 172
Eco32I GATATC 1 cut(s) 229
Eco47I GGWCC 1 cut(s) 721
Eco53kI GAGCTC 1 cut(s) 170
Eco57I CTGAAG 2 cut(s) 243, 560
EcoICRI GAGCTC 1 cut(s) 170
EcoNI CCTNNNNNAGG 1 cut(s) 716
EcoO109I RGGNCCY 1 cut(s) 721
EcoRI GAATTC 1 cut(s) 119
EcoRII CCWGG 1 cut(s) 717
EcoRV GATATC 1 cut(s) 229
EcoT38I GRGCYC 1 cut(s) 172
FaeI CATG 1 cut(s) 516
FatI CATG 1 cut(s) 512
FblI GTMKAC 1 cut(s) 323
Fnu4HI GCNGC 1 cut(s) 757
FokI GGATG 3 cut(s) 82, 386, 704
FriOI GRGCYC 1 cut(s) 172
Fsp4HI GCNGC 1 cut(s) 757
FspBI CTAG 1 cut(s) 36
GluI GCNGC 1 cut(s) 757
GsuI CTGGAG 2 cut(s) 156, 296
HgaI GACGC 1 cut(s) 685
Hin1II CATG 1 cut(s) 516
HincII GTYRAC 1 cut(s) 78
HindII GTYRAC 1 cut(s) 78
HindIII AAGCTT 1 cut(s) 184
HinfI GANTC 3 cut(s) 113, 580, 731
HphI GGTGA 3 cut(s) 107, 500, 653
Hpy166II GTNNAC 4 cut(s) 78, 131, 324, 749
Hpy188III TCNNGA 7 cut(s) 124, 143, 194, 290, 340, 346, 523
Hpy8I GTNNAC 4 cut(s) 78, 131, 324, 749
Hpy99I CGWCG 1 cut(s) 557
HpyAV CCTTC 1 cut(s) 474
HpyCH4III ACNGT 4 cut(s) 135, 287, 544, 647
HpyCH4IV ACGT 4 cut(s) 264, 268, 552, 745
HpyCH4V TGCA 1 cut(s) 330
HpyF10VI GCNNNNNNNGC 1 cut(s) 676
HpyF3I CTNAG 5 cut(s) 200, 404, 534, 627, 752
HpySE526I ACGT 4 cut(s) 264, 268, 552, 745
Hsp92II CATG 1 cut(s) 516
Kzo9I GATC 6 cut(s) 342, 490, 519, 563, 571, 590
LmnI GCTCC 2 cut(s) 16, 175
LpnPI CCDG 8 cut(s) 186, 234, 260, 303, 340, 696, 704, 731
Lsp1109I GCAGC 1 cut(s) 743
LweI GCATC 1 cut(s) 679
MaeI CTAG 1 cut(s) 36
MaeII ACGT 4 cut(s) 264, 268, 552, 745
MaeIII GTNAC 2 cut(s) 506, 641
MalI GATC 6 cut(s) 344, 492, 521, 565, 573, 592
MboI GATC 6 cut(s) 342, 490, 519, 563, 571, 590
MboII GAAGA 3 cut(s) 236, 386, 566
MflI RGATCY 1 cut(s) 563
MhlI GDGCHC 1 cut(s) 172
MluCI AATT 2 cut(s) 119, 496
MlyI GAGTC 3 cut(s) 122, 589, 725
MmeI TCCRAC 1 cut(s) 38
MnlI CCTC 6 cut(s) 390, 409, 481, 634, 734, 770
MseI TTAA 3 cut(s) 216, 420, 790
MspR9I CCNGG 1 cut(s) 719
MvaI CCWGG 1 cut(s) 719
MwoI GCNNNNNNNGC 1 cut(s) 676
NdeII GATC 6 cut(s) 342, 490, 519, 563, 571, 590
NlaIII CATG 1 cut(s) 516
NmuCI GTSAC 2 cut(s) 506, 641
PcsI WCGNNNNNNNCGW 2 cut(s) 11, 265
Pfl23II CGTACG 1 cut(s) 265
PkrI GCNGC 1 cut(s) 758
PleI GAGTC 3 cut(s) 121, 588, 725
PpsI GAGTC 3 cut(s) 121, 588, 725
Ppu21I YACGTR 3 cut(s) 265, 269, 746
PpuMI RGGWCCY 1 cut(s) 721
Psp124BI GAGCTC 1 cut(s) 172
Psp5II RGGWCCY 1 cut(s) 721
Psp6I CCWGG 1 cut(s) 717
PspGI CCWGG 1 cut(s) 717
PspLI CGTACG 1 cut(s) 265
PspPI GGNCC 1 cut(s) 721
PspPPI RGGWCCY 1 cut(s) 721
PstNI CAGNNNCTG 1 cut(s) 116
PsuI RGATCY 1 cut(s) 563
RsaI GTAC 1 cut(s) 267
RsaNI GTAC 1 cut(s) 266
SacI GAGCTC 1 cut(s) 172
SaqAI TTAA 3 cut(s) 216, 420, 790
SatI GCNGC 1 cut(s) 757
Sau3AI GATC 6 cut(s) 342, 490, 519, 563, 571, 590
Sau96I GGNCC 1 cut(s) 721
SchI GAGTC 3 cut(s) 122, 589, 725
ScrFI CCNGG 1 cut(s) 719
SduI GDGCHC 1 cut(s) 172
SfaNI GCATC 1 cut(s) 679
SinI GGWCC 1 cut(s) 721
SmlI CTYRAG 4 cut(s) 86, 194, 485, 665
SmoI CTYRAG 4 cut(s) 86, 194, 485, 665
SnaBI TACGTA 1 cut(s) 265
SpeI ACTAGT 1 cut(s) 35
Sse9I AATT 2 cut(s) 119, 496
SspMI CTAG 1 cut(s) 36
SstI GAGCTC 1 cut(s) 172
StyD4I CCNGG 1 cut(s) 717
TaaI ACNGT 4 cut(s) 135, 287, 544, 647
TaiI ACGT 4 cut(s) 267, 271, 555, 748
TaqI TCGA 4 cut(s) 47, 354, 522, 555
TasI AATT 2 cut(s) 119, 496
Tru1I TTAA 3 cut(s) 216, 420, 790
Tru9I TTAA 3 cut(s) 216, 420, 790
TscAI CASTG 2 cut(s) 140, 574
TseFI GTSAC 2 cut(s) 506, 641
TseI GCWGC 1 cut(s) 756
Tsp45I GTSAC 2 cut(s) 506, 641
TspDTI ATGAA 2 cut(s) 114, 785
TspGWI ACGGA 2 cut(s) 179, 690
TspRI CASTG 2 cut(s) 140, 574
VpaK11BI GGWCC 1 cut(s) 721
XagI CCTNNNNNAGG 1 cut(s) 716
XapI RAATTY 1 cut(s) 119
XmiI GTMKAC 1 cut(s) 323
XspI CTAG 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.