RchiOBHm_Chr5g0069831

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000140
Physical Location & Seq
Forward (+)
75656737 .. 75661289
4553 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34520

Sequence Viewer

Length: 2025 bp
ATGTTATATCAGGGAAAAGATAGGACTATGGATGCAAGTTCTCGAATGGTACAATATAAAAAGCAGAAGTTGGATCGAGCAGAAGAGATGATAGGAGGCAGCAAGAGTTTAAGCAATTTACCGGATGTGCTTATTGTAAAAATTCTCTCCTTGCTTCCAACCAAAGATGCTATCAGGACAAGCATTCTGTCTAAAAGATGGGAATACATATGGACATCACTTCCCAATCTCAAGTTTATTCAATGGAAGTTTGAGAACAAGAGAACTCTCTTGGTGAATGCTGTGGAAAGAGCGCTTATTCTTCGTGGCCCTGCTGATATTAAAGAGTTCAGTCTTTCATTTGAAGTGTTGGGGGATGCATTACGTGTTAATACATGGATCTCTGCTGTATTACAGCACAATGTTGAAGATCTTTCTTTAGTCCTGCACAGTTTCAAGGACCCAGTTTCTTTGCCTCGTTCTTTATTTATGTCTGCGACATTGAAAGTGCTCCTGCTGGAACTGCCCTGTATTTTCAAAGTTCCTTCTACTATTTGTTTCTCAAGCCTAAGGAGCTTAACTCTTTCGTCCGTGGTGTTTTCTGACGACTACTCGGCCCAGCAGTTGTTTTCTGGTTGCTCAGTTCTTGAGGAAATATTTCTATATGGTTGCAATTGGGCAAATCTCAACTTTGTGAGTATTTCTGCTCCGAAGCTTTTGAGGTTTACCATAGATGAAGGGGATTCACAAATTTTAAGAGGTTCAGATGGTTGTCAGATTATGGTACTTGGAGTTAGACTCGCATATTTTTCTTACACAGGTGAGTTCCTAGATGACTATTGCTTTTATAACTCATCAGCAAATGAAGCTCTGATATCTCTTAATTCTATCAAGAGGGTCCAACATGTTAGTTACCGGTTGAATAAGCTTCTTAATGGGCTCTCTAGTGTGAAGCACCTAACCATCTGTGATACTTCCTTTGAGGGGATTGGTTTGTACTCAGATGATGCAAAAGATGATGGGATGTTGGAGCCACTGCCTCCATGTTTCTTGAATAGTCTTGAAGAGATTGATGTCTTAGAATTTTGTGGAGATGAGGATGAGCTTCATGCAATGAAGGTCTTGCTAAAATGTGCAATGGTCTTGAAAAAGGTGACTATTAATTGGTGCAGCGGTGTTCAAGTGGAACCAAAAACGATGAAGGACATTAACAAACAGTTATTAGATCTCCCCAGAGGGTCAGGAAACTGCAAAGTTGTTTGTTTATCCCCCTTGGTGAATATTATTGAAAGAGCACTTGTTCTGCGTGGCTCTGCTGATATAAAACAGTTCCGTCTTTTGTTTCCTGTGCTTAATGATGCATCTCGTGTTAATGCATGGATCTCTTCCTTAGTACGGCTCAATGTTGAGAATCTTTCTATAGACCTGTGTAGCTTGAAGGAACCAATTTTGTTGCCTCATTCTCTATTTACGTCTGCCACACTGAAAGTGCTGGTGCTTGATCTGCCCTGTATTTTCAAAGTCCCTTGTACTATTTGCTTCTCAAGTTTAAGGAGCCTGACACTTATGGAGGTGGTGTTTTCTGATTACTTCTCAAGCCAGCAGTTGTTTTCTGGTTGGCCGCTTTTGAGAGATGAAGGGGATTCACAAATTTCAAGAGGTTCAGATGGTTGCCAGATTATGGTATTTGGAGTTAGTCTCACATCTTTTTCTTACTGGGGTGAGTTCCTAGATGACTATTCCTTTTATAACTCATCCGCAAGTGAAGCTCATGTATCTCTTAATTCTATGAGGGTCAGACATGTTAGTTATCGGTTGTATAAGCTCCTTAGAGGCCTTTCTAATGTGATGGACCTAACTATCTGTTATACTTGCTTTGAGGTATGTGGTTCAGACCAATGCTCCAGAACTTCTTGCCAGATGCCCTTGTTCTATAATCTAACCGCTTTGGTATTGTATCCGCTGCAAGTAGATCTTGGCTGTAAAGGACTATTGACCATGCTCCGAAACTGTCCTTGTCTTCAAGCTTGTACATTCTGGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

674

Amino Acids

75.86

Weight (kDa)

6.02

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 37 - 77 2.4e-09 F-box domain
LRR_At1g61320_AtMIF1 PF23622 107 - 316 2.7e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 124 - 232 3e-12 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05080 AT1G19410 AT1G22000 AT1G26815 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G26890 AT1G32375 AT1G32375 AT1G50980 AT1G51055 AT1G55030 AT1G55030 AT1G55660 AT1G55660 AT2G04230 AT2G26860 AT2G26860 AT3G10750 AT3G26920 AT3G26920 AT3G26920 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26922 AT3G26930 AT3G26930 AT3G49020 AT3G49030 AT3G49030 AT3G49040 AT3G49045 AT3G49480 AT3G49480 AT3G50710 AT3G51530 AT3G52680 AT3G52680 AT3G52690 AT3G53550 AT3G54910 AT3G54910 AT3G54910 AT3G55670 AT4G00160 AT4G00315 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G09920 AT4G10400 AT4G10400 AT4G10400 AT4G10410 AT4G10420 AT4G13965 AT4G15060 AT4G15060 AT4G15075 AT4G26340 AT4G26350 AT5G11370 AT5G38565 AT5G38570 AT5G38580 AT5G38590 AT5G38590 AT5G38590 AT5G38590 AT5G40750 AT5G44850 AT5G50270 AT5G50270 AT5G52460 AT5G52460 AT5G56325 AT5G56370 AT5G56370 AT5G56370 AT5G56380 AT5G56380 AT5G56390 AT5G56400 AT5G56410 AT5G56420 AT5G56420 AT5G56420 AT5G56430 AT5G56440 AT5G56452 AT5G56452 AT5G56555 AT5G56560 AT5G56560 AT5G56570 AT5G56690 AT5G56700 AT5G56700 AT5G56800 AT5G56810 AT5G56810 AT5G56820 AT5G60610 AT5G60610 AT5G62970
malus_domestica MD10G1316000.v1.1
prunus_persica Prupe.4G024600_v2.0.a1
pyrus_communis pycom10g26820
rosa_chinensis RchiOBHm_Chr1g0383101 RchiOBHm_Chr5g0003811 RchiOBHm_Chr5g0069761 RchiOBHm_Chr5g0069771 RchiOBHm_Chr5g0069781 RchiOBHm_Chr5g0069791 RchiOBHm_Chr5g0069821 RchiOBHm_Chr5g0069831
rosa_laevigata RLG00000026130 RLG00000026375 RLG00000031193 RLG00000036088 RLG00000036089 RLG00000036090 RLG00000036095 RLG00000036096 RLG00000036097 RLG00000036099 RLG00000036100
rosa_multiflora Rmu_co8192842.1_g000001 Rmu_co8209784.1_g000001 Rmu_sc0000726.1_g000001 Rmu_sc0000726.1_g000003 Rmu_sc0000726.1_g000007 Rmu_sc0000726.1_g000008 Rmu_sc0000738.1_g000009 Rmu_sc0000738.1_g000010 Rmu_sc0000738.1_g000011 Rmu_sc0000738.1_g000015 Rmu_sc0000738.1_g000018 Rmu_sc0000738.1_g000019 Rmu_sc0004212.1_g000009 Rmu_sc0017283.1_g000003 Rmu_sc0024481.1_g000001
rosa_roxburghii Rroxscaffold_1G00011240 Rroxscaffold_1G00011270 Rroxscaffold_1G00011280 Rroxscaffold_1G00011300 Rroxscaffold_1G00011310 Rroxscaffold_1G00011320 Rroxscaffold_4G00277590
rosa_rugosa Rorug01G0413100 Rorug01G0438500 Rorug01G0438600 Rorug04G0406800 Rorug05G0399300 Rorug05G0399400 Rorug05G0399500 Rorug05G0399600 Rorug05G0399700 Rorug05G0399900.1 Rorug05G0400000 Rorug05G0400100
rosa_samantha Rh1AG436100 Rh1AG464200 Rh1BG421500 Rh1CG434900 Rh1DG454100 Rh5AG034000 Rh5AG034100 Rh5AG456400 Rh5AG456500 Rh5AG456600 Rh5AG456800 Rh5AG457000 Rh5BG032600 Rh5BG475500 Rh5BG475600 Rh5BG475800 Rh5BG475900 Rh5CG036600 Rh5CG036700 Rh5CG499100 Rh5CG499200 Rh5CG499400 Rh5CG499600 Rh5DG032800 Rh5DG487000 Rh5DG487100 Rh5DG487200 Rh5DG487400 Rh5DG487500
rosa_wichuraiana Rw5G003130 Rw5G042610 Rw5G042630 Rw5G042650 Rw5G042660 Rw5G042670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 828, 1728
AccB7I CCANNNNNTGG 1 cut(s) 1660
AciI CCGC 5 cut(s) 1152, 1601, 1737, 1923, 1940
AclWI GGATC 3 cut(s) 81, 386, 1367
AcoI YGGCCR 1 cut(s) 1598
AcsI RAATTY 4 cut(s) 141, 729, 1061, 1629
AfaI GTAC 6 cut(s) 51, 765, 977, 1374, 1510, 2011
AfeI AGCGCT 1 cut(s) 294
AfiI CCNNNNNNNGG 3 cut(s) 963, 1374, 1660
AflIII ACRYGT 3 cut(s) 364, 883, 1780
AgeI ACCGGT 1 cut(s) 894
AluBI AGCT 9 cut(s) 555, 694, 848, 907, 1084, 1413, 1748, 1804, 2006
AluI AGCT 9 cut(s) 555, 694, 848, 907, 1084, 1413, 1748, 1804, 2006
Alw21I GWGCWC 2 cut(s) 492, 1276
Alw26I GTCTC 1 cut(s) 1682
AlwI GGATC 3 cut(s) 81, 386, 1367
Aor51HI AGCGCT 1 cut(s) 294
AoxI GGCC 4 cut(s) 307, 594, 1598, 1813
ApeKI GCWGC 3 cut(s) 99, 1149, 1942
ApoI RAATTY 4 cut(s) 141, 729, 1061, 1629
AseI ATTAAT 1 cut(s) 1140
AsiGI ACCGGT 1 cut(s) 894
Asp700I GAANNNNTTC 1 cut(s) 636
AspLEI GCGC 1 cut(s) 295
AspS9I GGNCC 5 cut(s) 308, 439, 595, 877, 1831
AsuHPI GGTGA 5 cut(s) 286, 812, 1144, 1267, 1712
AvaII GGWCC 3 cut(s) 439, 877, 1831
AxyI CCTNAGG 1 cut(s) 548
BanII GRGCYC 1 cut(s) 921
BauI CACGAG 1 cut(s) 1344
BbsI GAAGAC 1 cut(s) 1991
Bbv12I GWGCWC 2 cut(s) 492, 1276
BbvI GCAGC 3 cut(s) 111, 1161, 1929
BccI CCATC 6 cut(s) 192, 740, 950, 992, 1640, 1822
BceAI ACGGC 1 cut(s) 1391
BciVI GTATCC 1 cut(s) 1947
BcoDI GTCTC 1 cut(s) 1682
BfaI CTAG 3 cut(s) 809, 924, 1709
BfmI CTRYAG 1 cut(s) 1398
BfoI RGCGCY 1 cut(s) 296
BfuI GTATCC 1 cut(s) 1947
BglII AGATCT 3 cut(s) 409, 1204, 1951
BisI GCNGC 4 cut(s) 100, 1150, 1601, 1943
BlsI GCNGC 4 cut(s) 101, 1151, 1602, 1944
Bme18I GGWCC 3 cut(s) 439, 877, 1831
BmgT120I GGNCC 5 cut(s) 308, 439, 595, 877, 1831
BmiI GGNNCC 6 cut(s) 441, 878, 1011, 1167, 1422, 1535
BmrI ACTGGG 2 cut(s) 437, 1705
BmsI GCATC 7 cut(s) 22, 157, 346, 976, 1327, 1349, 1890
BmuI ACTGGG 2 cut(s) 437, 1705
BpiI GAAGAC 1 cut(s) 1991
BplI GAGNNNNNCTC 6 cut(s) 544, 576, 762, 794, 1662, 1694
BpmI CTGGAG 1 cut(s) 1867
BpuEI CTTGAG 5 cut(s) 215, 526, 647, 1507, 1558
BsaAI YACGTR 1 cut(s) 365
BsaJI CCNNGG 2 cut(s) 570, 1251
BsaWI WCCGGW 2 cut(s) 121, 894
BsaXI ACNNNNNCTCC 4 cut(s) 1541, 1571, 1865, 1895
Bsc4I CCNNNNNNNGG 3 cut(s) 963, 1374, 1660
Bse118I RCCGGY 1 cut(s) 894
Bse1I ACTGG 2 cut(s) 443, 1700
Bse21I CCTNAGG 1 cut(s) 548
Bse3DI GCAATG 2 cut(s) 1098, 1122
BseDI CCNNGG 2 cut(s) 570, 1251
BseGI GGATG 6 cut(s) 37, 130, 361, 1008, 1084, 1733
BseLI CCNNNNNNNGG 3 cut(s) 963, 1374, 1660
BseMI GCAATG 2 cut(s) 1098, 1122
BseMII CTCAG 2 cut(s) 633, 993
BseNI ACTGG 2 cut(s) 443, 1700
BseXI GCAGC 3 cut(s) 111, 1161, 1929
BseYI CCCAGC 1 cut(s) 597
BsgI GTGCAG 2 cut(s) 410, 1168
BshFI GGCC 4 cut(s) 309, 596, 1600, 1815
BshTI ACCGGT 1 cut(s) 894
BsiHKAI GWGCWC 2 cut(s) 492, 1276
BsiSI CCGG 2 cut(s) 122, 895
BslFI GGGAC 1 cut(s) 1487
BslI CCNNNNNNNGG 3 cut(s) 963, 1374, 1660
BsmAI GTCTC 1 cut(s) 1682
BsmFI GGGAC 1 cut(s) 1487
BsmI GAATGC 2 cut(s) 183, 283
BsnI GGCC 4 cut(s) 309, 596, 1600, 1815
Bsp1286I GDGCHC 3 cut(s) 492, 921, 1276
Bsp1407I TGTACA 1 cut(s) 2009
Bsp143I GATC 7 cut(s) 73, 378, 409, 1204, 1359, 1480, 1951
BspACI CCGC 5 cut(s) 1152, 1601, 1737, 1923, 1940
BspANI GGCC 4 cut(s) 309, 596, 1600, 1815
BspCNI CTCAG 2 cut(s) 632, 992
BspLI GGNNCC 6 cut(s) 441, 878, 1011, 1167, 1422, 1535
BspPI GGATC 3 cut(s) 81, 386, 1367
BsrDI GCAATG 2 cut(s) 1098, 1122
BsrFI RCCGGY 1 cut(s) 894
BsrGI TGTACA 1 cut(s) 2009
BsrI ACTGG 2 cut(s) 443, 1700
BssAI RCCGGY 1 cut(s) 894
BssECI CCNNGG 2 cut(s) 570, 1251
BssMI GATC 7 cut(s) 73, 378, 409, 1204, 1359, 1480, 1951
BssSI CACGAG 1 cut(s) 1344
BssT1I CCWWGG 1 cut(s) 1251
Bst2BI CACGAG 1 cut(s) 1344
Bst4CI ACNGT 4 cut(s) 431, 1197, 1308, 1991
Bst6I CTCTTC 3 cut(s) 78, 1038, 1369
BstAUI TGTACA 1 cut(s) 2009
BstBAI YACGTR 1 cut(s) 365
BstC8I GCNNGC 1 cut(s) 1580
BstDEI CTNAG 6 cut(s) 548, 619, 979, 1057, 1369, 1808
BstDSI CCRYGG 1 cut(s) 570
BstF5I GGATG 6 cut(s) 37, 130, 361, 1008, 1084, 1733
BstH2I RGCGCY 1 cut(s) 296
BstHHI GCGC 1 cut(s) 295
BstKTI GATC 7 cut(s) 76, 381, 412, 1207, 1362, 1483, 1954
BstMAI GTCTC 1 cut(s) 1682
BstMBI GATC 7 cut(s) 73, 378, 409, 1204, 1359, 1480, 1951
BstMWI GCNNNNNNNGC 5 cut(s) 502, 552, 845, 1483, 1745
BstNSI RCATGY 2 cut(s) 887, 1784
BstSFI CTRYAG 1 cut(s) 1398
BstV1I GCAGC 3 cut(s) 111, 1161, 1929
BstV2I GAAGAC 1 cut(s) 1991
BstX2I RGATCY 5 cut(s) 378, 409, 1204, 1359, 1951
BstYI RGATCY 5 cut(s) 378, 409, 1204, 1359, 1951
Bsu36I CCTNAGG 1 cut(s) 548
BsuI GTATCC 1 cut(s) 1947
BsuRI GGCC 4 cut(s) 309, 596, 1600, 1815
BtgI CCRYGG 1 cut(s) 570
BtsCI GGATG 6 cut(s) 37, 130, 361, 1008, 1084, 1733
BtsI GCAGTG 1 cut(s) 1013
BtsIMutI CAGTG 2 cut(s) 1013, 1460
Cac8I GCNNGC 1 cut(s) 1580
CfoI GCGC 1 cut(s) 295
Cfr10I RCCGGY 1 cut(s) 894
Cfr13I GGNCC 5 cut(s) 308, 439, 595, 877, 1831
Csp6I GTAC 6 cut(s) 50, 764, 976, 1373, 1509, 2010
CspAI ACCGGT 1 cut(s) 894
CviAII CATG 8 cut(s) 375, 884, 1023, 1088, 1356, 1751, 1781, 1978
CviQI GTAC 6 cut(s) 50, 764, 976, 1373, 1509, 2010
DdeI CTNAG 6 cut(s) 548, 619, 979, 1057, 1369, 1808
DpnI GATC 7 cut(s) 75, 380, 411, 1206, 1361, 1482, 1953
DpnII GATC 7 cut(s) 73, 378, 409, 1204, 1359, 1480, 1951
EaeI YGGCCR 1 cut(s) 1598
Eam1104I CTCTTC 3 cut(s) 78, 1038, 1369
EarI CTCTTC 3 cut(s) 78, 1038, 1369
Eco130I CCWWGG 1 cut(s) 1251
Eco147I AGGCCT 1 cut(s) 1815
Eco24I GRGCYC 1 cut(s) 921
Eco32I GATATC 1 cut(s) 855
Eco47I GGWCC 3 cut(s) 439, 877, 1831
Eco47III AGCGCT 1 cut(s) 294
Eco81I CCTNAGG 1 cut(s) 548
EcoO109I RGGNCCY 1 cut(s) 439
EcoRV GATATC 1 cut(s) 855
EcoT14I CCWWGG 1 cut(s) 1251
EcoT22I ATGCAT 3 cut(s) 361, 1342, 1357
EcoT38I GRGCYC 1 cut(s) 921
ErhI CCWWGG 1 cut(s) 1251
FaeI CATG 8 cut(s) 378, 887, 1026, 1091, 1359, 1754, 1784, 1981
FalI AAGNNNNNCTT 2 cut(s) 1938, 1970
FaqI GGGAC 1 cut(s) 1487
FatI CATG 8 cut(s) 374, 883, 1022, 1087, 1355, 1750, 1780, 1977
FauNDI CATATG 1 cut(s) 209
Fnu4HI GCNGC 4 cut(s) 100, 1150, 1601, 1943
FokI GGATG 6 cut(s) 44, 137, 368, 1015, 1091, 1720
FriOI GRGCYC 1 cut(s) 921
Fsp4HI GCNGC 4 cut(s) 100, 1150, 1601, 1943
FspBI CTAG 3 cut(s) 809, 924, 1709
GlaI GCGC 1 cut(s) 294
GluI GCNGC 4 cut(s) 100, 1150, 1601, 1943
GsaI CCCAGC 1 cut(s) 601
GsuI CTGGAG 1 cut(s) 1867
HaeII RGCGCY 1 cut(s) 296
HaeIII GGCC 4 cut(s) 309, 596, 1600, 1815
HapII CCGG 2 cut(s) 122, 895
HhaI GCGC 1 cut(s) 295
Hin1II CATG 8 cut(s) 378, 887, 1026, 1091, 1359, 1754, 1784, 1981
Hin6I GCGC 1 cut(s) 293
HinP1I GCGC 1 cut(s) 293
HindIII AAGCTT 3 cut(s) 692, 905, 2004
HinfI GANTC 4 cut(s) 722, 777, 1390, 1622
HpaII CCGG 2 cut(s) 122, 895
HphI GGTGA 5 cut(s) 286, 812, 1144, 1267, 1712
Hpy166II GTNNAC 1 cut(s) 705
Hpy8I GTNNAC 1 cut(s) 705
HpyAV CCTTC 6 cut(s) 534, 710, 1090, 1174, 1411, 1610
HpyCH4III ACNGT 4 cut(s) 431, 1197, 1308, 1991
HpyCH4IV ACGT 2 cut(s) 364, 1451
HpyF10VI GCNNNNNNNGC 5 cut(s) 502, 552, 845, 1483, 1745
HpyF3I CTNAG 6 cut(s) 548, 619, 979, 1057, 1369, 1808
HpySE526I ACGT 2 cut(s) 364, 1451
Hsp92II CATG 8 cut(s) 378, 887, 1026, 1091, 1359, 1754, 1784, 1981
HspAI GCGC 1 cut(s) 293
Kzo9I GATC 7 cut(s) 73, 378, 409, 1204, 1359, 1480, 1951
LmnI GCTCC 8 cut(s) 495, 552, 691, 1009, 1533, 1809, 1886, 1986
Lsp1109I GCAGC 3 cut(s) 111, 1161, 1929
LweI GCATC 7 cut(s) 22, 157, 346, 976, 1327, 1349, 1890
MaeI CTAG 3 cut(s) 809, 924, 1709
MaeII ACGT 2 cut(s) 364, 1451
MaeIII GTNAC 2 cut(s) 890, 1132
MalI GATC 7 cut(s) 75, 380, 411, 1206, 1361, 1482, 1953
MboI GATC 7 cut(s) 73, 378, 409, 1204, 1359, 1480, 1951
MboII GAAGA 6 cut(s) 95, 293, 419, 1055, 1356, 1991
MfeI CAATTG 1 cut(s) 652
MflI RGATCY 5 cut(s) 378, 409, 1204, 1359, 1951
MhlI GDGCHC 3 cut(s) 492, 921, 1276
MlyI GAGTC 1 cut(s) 771
MmeI TCCRAC 4 cut(s) 51, 182, 904, 987
Mph1103I ATGCAT 3 cut(s) 361, 1342, 1357
MroXI GAANNNNTTC 1 cut(s) 636
MspA1I CMGCKG 2 cut(s) 1152, 1942
MspI CCGG 2 cut(s) 122, 895
MunI CAATTG 1 cut(s) 652
Mva1269I GAATGC 2 cut(s) 183, 283
MwoI GCNNNNNNNGC 5 cut(s) 502, 552, 845, 1483, 1745
NdeI CATATG 1 cut(s) 209
NdeII GATC 7 cut(s) 73, 378, 409, 1204, 1359, 1480, 1951
NlaIII CATG 8 cut(s) 378, 887, 1026, 1091, 1359, 1754, 1784, 1981
NlaIV GGNNCC 6 cut(s) 441, 878, 1011, 1167, 1422, 1535
NmeAIII GCCGAG 1 cut(s) 572
NmuCI GTSAC 1 cut(s) 1132
NsiI ATGCAT 3 cut(s) 361, 1342, 1357
NspI RCATGY 2 cut(s) 887, 1784
PceI AGGCCT 1 cut(s) 1815
PciI ACATGT 2 cut(s) 883, 1780
PctI GAATGC 2 cut(s) 183, 283
PdmI GAANNNNTTC 1 cut(s) 636
PfeI GAWTC 3 cut(s) 722, 1390, 1622
PflMI CCANNNNNTGG 1 cut(s) 1660
PinAI ACCGGT 1 cut(s) 894
PkrI GCNGC 4 cut(s) 101, 1151, 1602, 1944
PleI GAGTC 1 cut(s) 771
PpsI GAGTC 1 cut(s) 771
Ppu21I YACGTR 1 cut(s) 365
PpuMI RGGWCCY 1 cut(s) 439
PscI ACATGT 2 cut(s) 883, 1780
PshBI ATTAAT 1 cut(s) 1140
PsiI TTATAA 2 cut(s) 828, 1728
Psp5II RGGWCCY 1 cut(s) 439
PspFI CCCAGC 1 cut(s) 597
PspN4I GGNNCC 6 cut(s) 441, 878, 1011, 1167, 1422, 1535
PspPI GGNCC 5 cut(s) 308, 439, 595, 877, 1831
PspPPI RGGWCCY 1 cut(s) 439
PsuI RGATCY 5 cut(s) 378, 409, 1204, 1359, 1951
RsaI GTAC 6 cut(s) 51, 765, 977, 1374, 1510, 2011
RsaNI GTAC 6 cut(s) 50, 764, 976, 1373, 1509, 2010
SatI GCNGC 4 cut(s) 100, 1150, 1601, 1943
Sau3AI GATC 7 cut(s) 73, 378, 409, 1204, 1359, 1480, 1951
Sau96I GGNCC 5 cut(s) 308, 439, 595, 877, 1831
SchI GAGTC 1 cut(s) 771
SduI GDGCHC 3 cut(s) 492, 921, 1276
SfaNI GCATC 7 cut(s) 22, 157, 346, 976, 1327, 1349, 1890
SfcI CTRYAG 1 cut(s) 1398
SinI GGWCC 3 cut(s) 439, 877, 1831
SmlI CTYRAG 5 cut(s) 230, 541, 626, 1522, 1573
SmoI CTYRAG 5 cut(s) 230, 541, 626, 1522, 1573
SseBI AGGCCT 1 cut(s) 1815
SsiI CCGC 5 cut(s) 1152, 1601, 1737, 1923, 1940
SspI AATATT 2 cut(s) 636, 1261
SspMI CTAG 3 cut(s) 809, 924, 1709
StuI AGGCCT 1 cut(s) 1815
StyI CCWWGG 1 cut(s) 1251
TaaI ACNGT 4 cut(s) 431, 1197, 1308, 1991
TaiI ACGT 2 cut(s) 367, 1454
TaqI TCGA 2 cut(s) 43, 76
TatI WGTACW 3 cut(s) 975, 1508, 2009
TauI GCSGC 1 cut(s) 1603
TfiI GAWTC 3 cut(s) 722, 1390, 1622
TscAI CASTG 2 cut(s) 1020, 1467
TseFI GTSAC 1 cut(s) 1132
TseI GCWGC 3 cut(s) 99, 1149, 1942
Tsp45I GTSAC 1 cut(s) 1132
TspDTI ATGAA 7 cut(s) 327, 729, 858, 1076, 1109, 1193, 1629
TspGWI ACGGA 2 cut(s) 559, 1301
TspRI CASTG 2 cut(s) 1020, 1467
Van91I CCANNNNNTGG 1 cut(s) 1660
VpaK11BI GGWCC 3 cut(s) 439, 877, 1831
VspI ATTAAT 1 cut(s) 1140
XapI RAATTY 4 cut(s) 141, 729, 1061, 1629
XceI RCATGY 2 cut(s) 887, 1784
XmnI GAANNNNTTC 1 cut(s) 636
XspI CTAG 3 cut(s) 809, 924, 1709
Zsp2I ATGCAT 3 cut(s) 361, 1342, 1357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.