Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000052

Physical Location & Seq

Genomic Coordinates Forward (+)

5522602 .. 5525452

Gene Structure 2851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G16120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGAAGACAAAGACTAGCATCTTCCAATTTATTGTAGCATCTGTCCTTACTCTGCTCATCAATGACTCATCAGCAGCAACACCTCCACCTCCAATTAGCAATTCTTCAACGTCTTGTAACAAAACCTGTGGAGGAATCTCGATCCCGTTCCCATTCGGAATTGGCGGGAAAGATTGTTATCTCAACGGTTGGTACGAGGTTATCTGCAACACAACCACTTCCGATTCTAACACAACTGTTCCTTTACTCTCTATGATCAATCGGGAAGTGGTGAATATCTCTCTCCCAGACAGTAACGAACCATACGGACTTGTTCAAATCAAAGGTCCTGTGACATCGTTGGGTTGTTCTAGTAATACTAGTGAAGGACCCCAAAACTCGCTCCCGGTTTTGAATGTCACAGGTAAGGGCAGCCCATATTTCCTGACCGACGAGAACCGTCTTGTGGCGGTTGGTTGTGGTATAAAGGCATTGATGACAGATACAGAATCAGAGATCTTGGGTTGTGAATCGAGCTGCGAACACAGAAAGAGTGGTGAAGAAGTAACAAATTTGATCTGTACTGGTTACAGATGCTGCCAGGCGAGGCTACCGGTGGGGCGTCCTCAGGCTATAACCGTAAATATAGAGAACTCTAGTGGAGGAGAAGAAACGTGCAAAGTTGCGTTCTTGACGGACAAGAGGTATTCGCCGTCTAATGTTACAGAGCCAGAACAGTTTCATAACAATGGATATGTGGTGCTAGAGTTAGGATGGTACTTTGCCACTTCGAACTCTCGCTTTAAGAGCCTCTTGGGTTGTACAAATATGAGCCGAAAAGGTTCTGGGTTCTCGGATGATAATTGCAGTTGCGAGTATGATTACTTCTCCGGGATGAGTTATAGGAATTGTTATTGCGACTATGGCTACACAGGGAACCCATACCTTCGAGGTGGCTGCGTAGATACTGATTCATGCGAAGGAAATCACAACTGTGGGGAAGATGCTCATTGTGTTAACATGCCTGGACCAATGTCCATGTGCAGGCCTAACCCCAAGATAACCAAACCTACCAAACCCCCGGTGCTTCAAGGCATTCTTATAGGTTTGTCAGGATTAGTATTTTTTGTTGGGCTATTCTGGCTATTTAAACTCATAAAGAAGCGAAGGAACATCAACCGCAGCAAGAAGTTTTTCAAACGGAACGGAGGCTTGCTGTTGAAACAACAATTAACTACAAAGGACGGAAATGTAGAAATGTCTAAGATTTTCAGTTCAAAGGAGTTAAGAAAAGCCACTGATAACTTCAGCATAGATAGAGTGCTTGGGCAAGGCGGTCAAGGCACTGTGTACAAAGGAATGTTGGTAGATGGGAGCATCGTTGCGGTTAAAAGATCCAAAGTTGTGGATGAAGACAAAATGGAAGAGTTTATCAATGAGATTGTTCTTCTGTCACAAATCAATCACCGCAACATTGTGAAACTCTTGGGATGTTGCTTGGAGACAGAAGTTCCAATCTTGGTGTACGAATATATTCCCAATGGAGATCTGTTCAAGCGGCTTCATGATGAATCTGATGATTACACCATGACTTGGGAAGTGCGGCTTCGCATAGCCATAGAGATAGCAGGAGCTCTTACATACATGCACTCAGCTGCAAGTTTTCCAATATTCCATAGAGATATTAAGACTACCAATATCCTACTGGACGAGAAATACCGAGCCAAAGTGTCTGACTTTGGAACTTCAAGATCAGTAACCTTAGATCAAACTCACTTGACAACATTAGTTGCAGGAACTTTTGGTTACATGGATCCAGAGTACTTCTTGTCAAGCCAATACACTCACAAGAGCGATGTTTATAGTTTCGGGGTCGTCTTGGTGGAGCTCATAACCGGAGAAAAACCATTGTCCCGTGTCCGGTCTGAAGAAGGTAGAGGCTTGGCAACTCATTTCCTCGAGGCCATGAAAGAGAACAGAGTGATTGACATAATTGATATTCGGATCAAAGACGAAAGCAAACTGGAGCAAGTAATGGCGGTAGCAAAACTCGCCAGAAAATGTCTTAACCGGAAAGGGAAGAACCGGCCAAACATGAAAGAGGTTTCAAATGAGCTAGAGAGGATCCGTTCATCACCCGAAGATTTAGATGTCCGTACCGAAAACGAAGACGAAGAAGAGGATCAACCAATGGCAATCAACAACAAAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004383 GO:0004672 GO:0004674 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006464 GO:0006468 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009751 GO:0009975 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0023052 GO:0030312 GO:0034641 GO:0034654 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044464 GO:0046068 GO:0046390 GO:0046483 GO:0046677 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052652 GO:0055086 GO:0065007 GO:0071704 GO:0071944 GO:0072521 GO:0072522 GO:0090407 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

730

Amino Acids

81.21

Weight (kDa)

6.33

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	39 - 96	9.6e-08	Wall-associated receptor kinase galacturonan-binding
WAK	PF08488	184 - 261	5.5e-34	Wall-associated kinase
Pkinase	PF00069	430 - 697	8.5e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	431 - 699	3.5e-50	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca	FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica	MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica	Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis	pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis	RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata	RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora	Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii	Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa	Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha	Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana	Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1937
AccB7I	CCANNNNNTGG	1 cut(s)	1572
AciI	CCGC	9 cut(s)	165, 449, 1159, 1314, 1364, 1447, 1537, 1582, 2018
AclWI	GGATC	8 cut(s)	136, 1368, 1787, 1800, 1991, 2098, 2111, 2169
AcoI	YGGCCR	1 cut(s)	2066
AcsI	RAATTY	1 cut(s)	550
AcuI	CTGAAG	2 cut(s)	1270, 1926
AcyI	GRCGYC	1 cut(s)	601
AfaI	GTAC	8 cut(s)	194, 562, 758, 802, 1331, 1505, 1802, 2137
AfiI	CCNNNNNNNGG	4 cut(s)	445, 1023, 1572, 1899
AgeI	ACCGGT	1 cut(s)	592
AhlI	ACTAGT	1 cut(s)	359
AjnI	CCWGG	2 cut(s)	579, 1003
AjuI	GAANNNNNNNTTGG	2 cut(s)	85, 117
AleI	CACNNNNGTG	1 cut(s)	972
AluBI	AGCT	5 cut(s)	516, 1613, 1634, 1867, 2095
AluI	AGCT	5 cut(s)	516, 1613, 1634, 1867, 2095
Alw21I	GWGCWC	2 cut(s)	1615, 1869
Alw26I	GTCTC	1 cut(s)	1475
AlwI	GGATC	8 cut(s)	136, 1368, 1787, 1800, 1991, 2098, 2111, 2169
AlwNI	CAGNNNCTG	1 cut(s)	576
Ama87I	CYCGRG	1 cut(s)	1937
AoxI	GGCC	3 cut(s)	1025, 1941, 2066
ApeKI	GCWGC	7 cut(s)	74, 411, 516, 576, 936, 1161, 1634
ApoI	RAATTY	1 cut(s)	550
ArsI	GACNNNNNNTTYG	2 cut(s)	310, 342
AsiGI	ACCGGT	1 cut(s)	592
Asp700I	GAANNNNTTC	4 cut(s)	717, 820, 1172, 1512
AspS9I	GGNCC	3 cut(s)	326, 368, 1007
AsuC2I	CCSGG	3 cut(s)	386, 871, 1061
AsuHPI	GGTGA	4 cut(s)	283, 548, 1436, 2106
AsuII	TTCGAA	1 cut(s)	770
AvaI	CYCGRG	1 cut(s)	1937
AvaII	GGWCC	3 cut(s)	326, 368, 1007
AxyI	CCTNAGG	1 cut(s)	606
BamHI	GGATCC	2 cut(s)	1792, 2103
BanII	GRGCYC	2 cut(s)	1615, 1869
BarI	GAAGNNNNNNTAC	2 cut(s)	848, 880
BbsI	GAAGAC	3 cut(s)	11, 1398, 2154
Bbv12I	GWGCWC	2 cut(s)	1615, 1869
BbvI	GCAGC	7 cut(s)	86, 423, 503, 563, 923, 1173, 1621
BccI	CCATC	2 cut(s)	747, 1343
BceAI	ACGGC	1 cut(s)	676
BcgI	CGANNNNNNTGC	2 cut(s)	918, 952
BciT130I	CCWGG	2 cut(s)	581, 1005
BclI	TGATCA	1 cut(s)	255
BcnI	CCSGG	3 cut(s)	386, 871, 1061
BcoDI	GTCTC	1 cut(s)	1475
BcuI	ACTAGT	1 cut(s)	359
BfaI	CTAG	6 cut(s)	15, 351, 360, 636, 743, 2096
BglII	AGATCT	2 cut(s)	495, 1525
BisI	GCNGC	9 cut(s)	75, 412, 517, 577, 937, 1162, 1538, 1583, 1635
BlsI	GCNGC	9 cut(s)	76, 413, 518, 578, 938, 1163, 1539, 1584, 1636
BmcAI	AGTACT	1 cut(s)	1802
Bme1390I	CCNGG	5 cut(s)	386, 581, 871, 1005, 1061
Bme18I	GGWCC	3 cut(s)	326, 368, 1007
BmeT110I	CYCGRG	1 cut(s)	1937
BmgT120I	GGNCC	3 cut(s)	326, 368, 1007
BmiI	GGNNCC	4 cut(s)	370, 917, 1794, 2105
BmrFI	CCNGG	5 cut(s)	386, 581, 871, 1005, 1061
BmsI	GCATC	5 cut(s)	27, 47, 563, 973, 1365
BoxI	GACNNNNGTC	1 cut(s)	1012
BpiI	GAAGAC	3 cut(s)	11, 1398, 2154
BpmI	CTGGAG	1 cut(s)	2024
Bpu14I	TTCGAA	1 cut(s)	770
BpuMI	CCSGG	3 cut(s)	386, 871, 1061
BsaBI	GATNNNNATC	1 cut(s)	177
BsaHI	GRCGYC	1 cut(s)	601
BsaJI	CCNNGG	1 cut(s)	1059
BsaWI	WCCGGW	4 cut(s)	592, 1874, 1899, 2049
Bsc4I	CCNNNNNNNGG	4 cut(s)	445, 1023, 1572, 1899
Bse118I	RCCGGY	2 cut(s)	592, 2064
Bse1I	ACTGG	3 cut(s)	568, 1689, 2007
Bse21I	CCTNAGG	1 cut(s)	606
Bse8I	GATNNNNATC	1 cut(s)	177
BseBI	CCWGG	2 cut(s)	581, 1005
BseDI	CCNNGG	1 cut(s)	1059
BseGI	GGATG	5 cut(s)	758, 841, 879, 1393, 1475
BseJI	GATNNNNATC	1 cut(s)	177
BseLI	CCNNNNNNNGG	4 cut(s)	445, 1023, 1572, 1899
BseMII	CTCAG	2 cut(s)	620, 1644
BseNI	ACTGG	3 cut(s)	568, 1689, 2007
BseRI	GAGGAG	1 cut(s)	657
BseXI	GCAGC	7 cut(s)	86, 423, 503, 563, 923, 1173, 1621
BsgI	GTGCAG	1 cut(s)	1042
BshFI	GGCC	3 cut(s)	1027, 1943, 2068
BshTI	ACCGGT	1 cut(s)	592
BsiHKAI	GWGCWC	2 cut(s)	1615, 1869
BsiHKCI	CYCGRG	1 cut(s)	1937
BsiSI	CCGG	8 cut(s)	386, 593, 870, 1061, 1875, 1900, 2050, 2065
BslFI	GGGAC	1 cut(s)	1876
BslI	CCNNNNNNNGG	4 cut(s)	445, 1023, 1572, 1899
BsmAI	GTCTC	1 cut(s)	1475
BsmFI	GGGAC	1 cut(s)	1876
BsmI	GAATGC	1 cut(s)	1074
BsnI	GGCC	3 cut(s)	1027, 1943, 2068
BsoBI	CYCGRG	1 cut(s)	1937
Bsp119I	TTCGAA	1 cut(s)	770
Bsp1286I	GDGCHC	2 cut(s)	1615, 1869
Bsp1407I	TGTACA	2 cut(s)	800, 1329
BspACI	CCGC	9 cut(s)	165, 449, 1159, 1314, 1364, 1447, 1537, 1582, 2018
BspANI	GGCC	3 cut(s)	1027, 1943, 2068
BspCNI	CTCAG	2 cut(s)	619, 1643
BspHI	TCATGA	1 cut(s)	1543
BspLI	GGNNCC	4 cut(s)	370, 917, 1794, 2105
BspPI	GGATC	8 cut(s)	136, 1368, 1787, 1800, 1991, 2098, 2111, 2169
BspT104I	TTCGAA	1 cut(s)	770
BsrFI	RCCGGY	2 cut(s)	592, 2064
BsrGI	TGTACA	2 cut(s)	800, 1329
BsrI	ACTGG	3 cut(s)	568, 1689, 2007
BssAI	RCCGGY	2 cut(s)	592, 2064
BssECI	CCNNGG	1 cut(s)	1059
BssNI	GRCGYC	1 cut(s)	601
Bst2UI	CCWGG	2 cut(s)	581, 1005
Bst4CI	ACNGT	8 cut(s)	188, 238, 293, 440, 619, 717, 974, 1327
Bst6I	CTCTTC	2 cut(s)	1398, 2151
BstACI	GRCGYC	1 cut(s)	601
BstAUI	TGTACA	2 cut(s)	800, 1329
BstBI	TTCGAA	1 cut(s)	770
BstC8I	GCNNGC	2 cut(s)	1025, 1193
BstDEI	CTNAG	4 cut(s)	606, 1242, 1630, 1741
BstF5I	GGATG	5 cut(s)	758, 841, 879, 1393, 1475
BstMAI	GTCTC	1 cut(s)	1475
BstMWI	GCNNNNNNNGC	5 cut(s)	786, 903, 1120, 1320, 2030
BstNI	CCWGG	2 cut(s)	581, 1005
BstNSI	RCATGY	2 cut(s)	1003, 1627
BstPAI	GACNNNNGTC	1 cut(s)	1012
BstSCI	CCNGG	5 cut(s)	384, 579, 869, 1003, 1059
BstV1I	GCAGC	7 cut(s)	86, 423, 503, 563, 923, 1173, 1621
BstV2I	GAAGAC	3 cut(s)	11, 1398, 2154
BstX2I	RGATCY	5 cut(s)	495, 1373, 1525, 1792, 2103
BstXI	CCANNNNNNTGG	1 cut(s)	1384
BstYI	RGATCY	5 cut(s)	495, 1373, 1525, 1792, 2103
Bsu36I	CCTNAGG	1 cut(s)	606
BsuRI	GGCC	3 cut(s)	1027, 1943, 2068
BtgZI	GCGATG	1 cut(s)	1848
BtsCI	GGATG	5 cut(s)	758, 841, 879, 1393, 1475
BtsIMutI	CAGTG	2 cut(s)	1275, 1323
Cac8I	GCNNGC	2 cut(s)	1025, 1193
CaiI	CAGNNNCTG	1 cut(s)	576
CciI	TCATGA	1 cut(s)	1543
Cfr10I	RCCGGY	2 cut(s)	592, 2064
Cfr13I	GGNCC	3 cut(s)	326, 368, 1007
CseI	GACGC	1 cut(s)	590
Csp6I	GTAC	8 cut(s)	193, 561, 757, 801, 1330, 1504, 1801, 2136
CspAI	ACCGGT	1 cut(s)	592
CspCI	CAANNNNNGTGG	2 cut(s)	109, 144
CviAII	CATG	9 cut(s)	954, 1000, 1018, 1544, 1567, 1624, 1789, 1945, 2074
CviQI	GTAC	8 cut(s)	193, 561, 757, 801, 1330, 1504, 1801, 2136
DdeI	CTNAG	4 cut(s)	606, 1242, 1630, 1741
DraI	TTTAAA	1 cut(s)	1129
EaeI	YGGCCR	1 cut(s)	2066
Eam1104I	CTCTTC	2 cut(s)	1398, 2151
EarI	CTCTTC	2 cut(s)	1398, 2151
Ecl136II	GAGCTC	2 cut(s)	1613, 1867
Eco147I	AGGCCT	1 cut(s)	1027
Eco24I	GRGCYC	2 cut(s)	1615, 1869
Eco47I	GGWCC	3 cut(s)	326, 368, 1007
Eco53kI	GAGCTC	2 cut(s)	1613, 1867
Eco57I	CTGAAG	2 cut(s)	1270, 1926
Eco81I	CCTNAGG	1 cut(s)	606
Eco88I	CYCGRG	1 cut(s)	1937
EcoICRI	GAGCTC	2 cut(s)	1613, 1867
EcoO109I	RGGNCCY	2 cut(s)	326, 368
EcoRII	CCWGG	2 cut(s)	579, 1003
EcoT38I	GRGCYC	2 cut(s)	1615, 1869
FaeI	CATG	9 cut(s)	957, 1003, 1021, 1547, 1570, 1627, 1792, 1948, 2077
FalI	AAGNNNNNCTT	6 cut(s)	776, 808, 1062, 1094, 1569, 1601
FaqI	GGGAC	1 cut(s)	1876
FatI	CATG	9 cut(s)	953, 999, 1017, 1543, 1566, 1623, 1788, 1944, 2073
FauI	CCCGC	1 cut(s)	158
FbaI	TGATCA	1 cut(s)	255
Fnu4HI	GCNGC	9 cut(s)	75, 412, 517, 577, 937, 1162, 1538, 1583, 1635
FokI	GGATG	5 cut(s)	765, 848, 886, 1400, 1482
FriOI	GRGCYC	2 cut(s)	1615, 1869
Fsp4HI	GCNGC	9 cut(s)	75, 412, 517, 577, 937, 1162, 1538, 1583, 1635
FspBI	CTAG	6 cut(s)	15, 351, 360, 636, 743, 2096
GluI	GCNGC	9 cut(s)	75, 412, 517, 577, 937, 1162, 1538, 1583, 1635
GsuI	CTGGAG	1 cut(s)	2024
HaeIII	GGCC	3 cut(s)	1027, 1943, 2068
HapII	CCGG	8 cut(s)	386, 593, 870, 1061, 1875, 1900, 2050, 2065
HgaI	GACGC	1 cut(s)	590
Hin1I	GRCGYC	1 cut(s)	601
Hin1II	CATG	9 cut(s)	957, 1003, 1021, 1547, 1570, 1627, 1792, 1948, 2077
HincII	GTYRAC	1 cut(s)	997
HindII	GTYRAC	1 cut(s)	997
HinfI	GANTC	7 cut(s)	65, 135, 224, 488, 509, 950, 1550
HpaI	GTTAAC	1 cut(s)	997
HpaII	CCGG	8 cut(s)	386, 593, 870, 1061, 1875, 1900, 2050, 2065
HphI	GGTGA	4 cut(s)	283, 548, 1436, 2106
Hpy166II	GTNNAC	3 cut(s)	997, 1330, 1504
Hpy188I	TCNGA	8 cut(s)	158, 223, 493, 835, 1555, 1714, 1906, 1983
Hpy188III	TCNNGA	8 cut(s)	139, 263, 424, 670, 1092, 1544, 1728, 1796
Hpy8I	GTNNAC	3 cut(s)	997, 1330, 1504
Hpy99I	CGWCG	1 cut(s)	434
HpyAV	CCTTC	5 cut(s)	359, 935, 953, 1140, 1904
HpyCH4III	ACNGT	8 cut(s)	188, 238, 293, 440, 619, 717, 974, 1327
HpyCH4IV	ACGT	2 cut(s)	110, 653
HpyCH4V	TGCA	7 cut(s)	207, 657, 846, 1023, 1627, 1637, 1772
HpyF10VI	GCNNNNNNNGC	5 cut(s)	786, 903, 1120, 1320, 2030
HpyF3I	CTNAG	4 cut(s)	606, 1242, 1630, 1741
HpySE526I	ACGT	2 cut(s)	110, 653
Hsp92I	GRCGYC	1 cut(s)	601
Hsp92II	CATG	9 cut(s)	957, 1003, 1021, 1547, 1570, 1627, 1792, 1948, 2077
Ksp22I	TGATCA	1 cut(s)	255
KspAI	GTTAAC	1 cut(s)	997
LmnI	GCTCC	5 cut(s)	387, 1353, 1610, 1864, 2005
Lsp1109I	GCAGC	7 cut(s)	86, 423, 503, 563, 923, 1173, 1621
LweI	GCATC	5 cut(s)	27, 47, 563, 973, 1365
MaeI	CTAG	6 cut(s)	15, 351, 360, 636, 743, 2096
MaeII	ACGT	2 cut(s)	110, 653
MflI	RGATCY	5 cut(s)	495, 1373, 1525, 1792, 2103
MhlI	GDGCHC	2 cut(s)	1615, 1869
MluCI	AATT	9 cut(s)	26, 93, 100, 159, 550, 841, 886, 1208, 1971
MlyI	GAGTC	1 cut(s)	59
MroXI	GAANNNNTTC	4 cut(s)	717, 820, 1172, 1512
MseI	TTAA	8 cut(s)	783, 996, 1128, 1211, 1265, 1368, 1665, 2046
MslI	CAYNNNNRTG	2 cut(s)	726, 972
MspA1I	CMGCKG	1 cut(s)	1634
MspI	CCGG	8 cut(s)	386, 593, 870, 1061, 1875, 1900, 2050, 2065
MspR9I	CCNGG	5 cut(s)	386, 581, 871, 1005, 1061
Mva1269I	GAATGC	1 cut(s)	1074
MvaI	CCWGG	2 cut(s)	581, 1005
MwoI	GCNNNNNNNGC	5 cut(s)	786, 903, 1120, 1320, 2030
NciI	CCSGG	3 cut(s)	386, 871, 1061
NlaIII	CATG	9 cut(s)	957, 1003, 1021, 1547, 1570, 1627, 1792, 1948, 2077
NlaIV	GGNNCC	4 cut(s)	370, 917, 1794, 2105
NmuCI	GTSAC	3 cut(s)	331, 397, 1431
NspI	RCATGY	2 cut(s)	1003, 1627
NspV	TTCGAA	1 cut(s)	770
OliI	CACNNNNGTG	1 cut(s)	972
PaeR7I	CTCGAG	1 cut(s)	1937
PagI	TCATGA	1 cut(s)	1543
PceI	AGGCCT	1 cut(s)	1027
PcsI	WCGNNNNNNNCGW	1 cut(s)	192
PctI	GAATGC	1 cut(s)	1074
PdmI	GAANNNNTTC	4 cut(s)	717, 820, 1172, 1512
PfeI	GAWTC	6 cut(s)	135, 224, 488, 509, 950, 1550
PflMI	CCANNNNNTGG	1 cut(s)	1572
PfoI	TCCNGGA	1 cut(s)	869
PinAI	ACCGGT	1 cut(s)	592
PkrI	GCNGC	9 cut(s)	76, 413, 518, 578, 938, 1163, 1539, 1584, 1636
PleI	GAGTC	1 cut(s)	59
PpsI	GAGTC	1 cut(s)	59
PpuMI	RGGWCCY	2 cut(s)	326, 368
PshAI	GACNNNNGTC	1 cut(s)	1012
Psp124BI	GAGCTC	2 cut(s)	1615, 1869
Psp5II	RGGWCCY	2 cut(s)	326, 368
Psp6I	CCWGG	2 cut(s)	579, 1003
PspGI	CCWGG	2 cut(s)	579, 1003
PspN4I	GGNNCC	4 cut(s)	370, 917, 1794, 2105
PspPI	GGNCC	3 cut(s)	326, 368, 1007
PspPPI	RGGWCCY	2 cut(s)	326, 368
PspXI	VCTCGAGB	1 cut(s)	1937
PstNI	CAGNNNCTG	1 cut(s)	576
PsuI	RGATCY	5 cut(s)	495, 1373, 1525, 1792, 2103
PvuII	CAGCTG	1 cut(s)	1634
RsaI	GTAC	8 cut(s)	194, 562, 758, 802, 1331, 1505, 1802, 2137
RsaNI	GTAC	8 cut(s)	193, 561, 757, 801, 1330, 1504, 1801, 2136
RseI	CAYNNNNRTG	2 cut(s)	726, 972
SacI	GAGCTC	2 cut(s)	1615, 1869
SaqAI	TTAA	8 cut(s)	783, 996, 1128, 1211, 1265, 1368, 1665, 2046
SatI	GCNGC	9 cut(s)	75, 412, 517, 577, 937, 1162, 1538, 1583, 1635
Sau96I	GGNCC	3 cut(s)	326, 368, 1007
ScaI	AGTACT	1 cut(s)	1802
SchI	GAGTC	1 cut(s)	59
ScrFI	CCNGG	5 cut(s)	386, 581, 871, 1005, 1061
SduI	GDGCHC	2 cut(s)	1615, 1869
SfaNI	GCATC	5 cut(s)	27, 47, 563, 973, 1365
Sfr274I	CTCGAG	1 cut(s)	1937
SfuI	TTCGAA	1 cut(s)	770
SinI	GGWCC	3 cut(s)	326, 368, 1007
SlaI	CTCGAG	1 cut(s)	1937
SmiMI	CAYNNNNRTG	2 cut(s)	726, 972
SmlI	CTYRAG	1 cut(s)	1937
SmoI	CTYRAG	1 cut(s)	1937
SpeI	ACTAGT	1 cut(s)	359
Sse9I	AATT	9 cut(s)	26, 93, 100, 159, 550, 841, 886, 1208, 1971
SseBI	AGGCCT	1 cut(s)	1027
SsiI	CCGC	9 cut(s)	165, 449, 1159, 1314, 1364, 1447, 1537, 1582, 2018
SspI	AATATT	1 cut(s)	1650
SspMI	CTAG	6 cut(s)	15, 351, 360, 636, 743, 2096
SstI	GAGCTC	2 cut(s)	1615, 1869
StuI	AGGCCT	1 cut(s)	1027
StyD4I	CCNGG	5 cut(s)	384, 579, 869, 1003, 1059
TaaI	ACNGT	8 cut(s)	188, 238, 293, 440, 619, 717, 974, 1327
TaiI	ACGT	2 cut(s)	113, 656
TaqI	TCGA	5 cut(s)	140, 512, 770, 928, 1938
TaqII	GACCGA	1 cut(s)	443
TasI	AATT	9 cut(s)	26, 93, 100, 159, 550, 841, 886, 1208, 1971
TatI	WGTACW	4 cut(s)	560, 800, 1329, 1800
TauI	GCSGC	2 cut(s)	1540, 1585
TfiI	GAWTC	6 cut(s)	135, 224, 488, 509, 950, 1550
Tru1I	TTAA	8 cut(s)	783, 996, 1128, 1211, 1265, 1368, 1665, 2046
Tru9I	TTAA	8 cut(s)	783, 996, 1128, 1211, 1265, 1368, 1665, 2046
TscAI	CASTG	2 cut(s)	1282, 1330
TseFI	GTSAC	3 cut(s)	331, 397, 1431
TseI	GCWGC	7 cut(s)	74, 411, 516, 576, 936, 1161, 1634
Tsp45I	GTSAC	3 cut(s)	331, 397, 1431
TspDTI	ATGAA	9 cut(s)	17, 710, 942, 1404, 1532, 1563, 1961, 2090, 2100
TspGWI	ACGGA	7 cut(s)	321, 689, 1195, 1200, 1239, 2096, 2123
TspRI	CASTG	2 cut(s)	1282, 1330
Van91I	CCANNNNNTGG	1 cut(s)	1572
VpaK11BI	GGWCC	3 cut(s)	326, 368, 1007
XapI	RAATTY	1 cut(s)	550
XceI	RCATGY	2 cut(s)	1003, 1627
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1681
XhoI	CTCGAG	1 cut(s)	1937
XmnI	GAANNNNTTC	4 cut(s)	717, 820, 1172, 1512
XspI	CTAG	6 cut(s)	15, 351, 360, 636, 743, 2096
ZrmI	AGTACT	1 cut(s)	1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.