Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000052

Physical Location & Seq

Genomic Coordinates Reverse (-)

74245485 .. 74257926

Gene Structure 12442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG519000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2619 bp

ATGAGTAGTACTGAAGTACTAGTTGTAGCATCAGAAGCACCCATTGTAGCAACAGAAGCACCCATAGCAAAGCCTAATTGTCCATCGCATTGTGGAGGCATTGAAATCCCATACCCTTTTGGGATAGGAGCAGGTTGTTACATTCATGACGACTGGTTTCAAGTATTCTGTGACAACTCCACTGGCTCTCCTACACCTTTCTTGAACGGCACCAATCTGGAGGTACTAGATATTTCTGTTGAAGGCACTCTAAAGGTCAGAAACCCAATCACCTTCTCTAATTGCACTGATAAGCCAAATCGTCAAGCAGTCAACTTGGAGGGAAGCCCTTTTATGTTCTCCCAGAAGAACATGTTCACTGCAGTAGGTTGCGGAGTTATGGCCACAATCACCTCAAACTCAAATGGCGTTACCATTTCAGCCGGGTGCAGGTCCGAATGTTATGATTATACTGATAGTAAAAATAGTAGCAGCCATAATACCTGCAATGGTGTGGATTGCTGCCAGACTGTCATCCCTCATTCCCTCTCTGCCTTCAATACTAGTTTCCAGCAGGCTAATGATAATTACACAAAAAGTTCATGTAATTATGCATTTTTGGTTGATGGTGATTGGTTTGAGTCATTTGCCAAAAATTCAACAAATATTTCTGCCACCAGTGATATGGACCAAGTCCCCGTGGAGCTAAAATGGAACTTGTACCATTCAACAACTGATGTTTTTGGGACCTTTAAAGAAACAAATGTATCGGTGCGGTATGCTGATGACCTAGATGGTTATTGCAAGACTTACAACGACAGCTCTTCATCATATGAATCCTTAAGGCTTGAATGTTCCTGTGGAGGGGGCTCTACGGGAAATCCATATCTTCCTCAAGGATGCATAGATATCAATGAATGTGAGGATCCCGAAAAAAGAGCTGAATGTTCTCCAGGGTACGTTTGTGTCAATGATTTTCGTGGATATGGATGCACCCTCCCAGAAACCGGCAAGGCGCGGGTTAAAGTAACTTCATATGTACTCCTGAGCTTCCTTTTGGGTCAGTTACCGTCGTTTCAACATCATCAAGTAGTGGTGTCTCAGTCGGCTGAGATAACCATGGGGTTGTCGGAGCAGTACCAGCCGCTACTCCTCGGACCTGACTCATATTCCCGGATTCCTGACTTGTCACCCGCTGCAATTGAAATTTTTTTGGAGCGAAGGCCTATAGCACTAAGGTGGTGGCCTAGGCTAGTGGTATGGGAGTCGAGGCTGCTATGGATTTTATCCGGTTCATCTATCGTAGTTTCGCTTTTCAATTACATGCTCAGCTTTGTCACATTGATGTTTTGTGGCCATCTGAGTGCATTGGAGCTTGCTGGGGCCTCTATTGCAAGTGTGGGAATCCAAGGTCTTGCTTATGGGATTATGTTGGGCATGGCGAGTGCTGTACAAACTGTTTGTGGGCAAGCCTACGGAGCCAAACACTACGGAGCATTGGGGATAATATGCCAAAGAGCAATCGTCTTGCACTTGGGAGCAGCAATCCTGCTTACATTTTTGTACTGGTGGTCAGGTCCAATACTCGTAGCCATGGGACAATCAGAAAGTATAGCAGAACAGGGTCAAATCTTTGCGCGCGGCTTAATCCCTCAACTCTATGCATTTGCCATAAACTGCCCACAACAGAGGTTCCTTCAGGCACAGAACATAGTGAACCCTTTGGCATACATGTCCATTGGAGTTTTCCTCCTTCACACTACTCTCACTTGGTTGGTGGTTTATGTTGTGGACTATGGACTAATAGGTGCTGCTCTTACACTGAGTTTTTCTTGGTTTTTGCTTGTGATTACGTATGGGATTTACATTTTAGTAAGCCCCAACTGCAAGGAAACTTGGACTGGTTTCTCATGGAAAGCCTTTTCGGGACTTTGGCCTTACTTTAAGCTAACTCTTGCTTCTGCCATCATGTTGTGTTTGGAGATTTGGTACAATCAAGGTTTAGTGCTTATATCAGGGCTCCTAGCCAACCCTACAATCTCATTGGACTCCATTTCTATCTGCATGAACTACTTGAACTGGGACATGCAATTTATGCTAGGCCTCGCTGCTGCAGCAAGCGTTCGAGTGAGTAATGAGCTAGGTGCTGGTCATCCAAAGGTGGCCAAATTTTCTGTGTTTGTAGTGAATGGGACCAGCATCCTGATTAGCATAGTGTTCAGTGCTATTGTGCTGATATTCAAAGTGGGATTGAGCAAGCTATTTACAAGTGACGCCGATGTTATTGAGGCAGTATCTGAATTGACCCCCTTGCTAGCCATCTCTGTTTTCTTGAATGGCATTCAACCTATACTCTCAGGTGTGGCAATTGGAAGTGGATGGCAAGCTGTTGTAGCTTATGTGAACCTGACTTGTTATTATATTATCGGTCTTCCAATTGGGTGTGTTCTTGGCTTCAAAACTAGTATGGGAGTAGCAGGTATTTGGTGGGGGATGATTATTGGAGTATCTTTACAGACAGCAACTCTAATTGTTCTCACTGCCAGAACCAACTGGGATGCTGAGGTTGTGAACGCGGCTGAGAGATTGAAGAGATCTGCAAGTGTAGAACAATTGCTCTTGGAGGAAAACGGCGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0015075 GO:0015077 GO:0015078 GO:0015238 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015672 GO:0015893 GO:0016020 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0021700 GO:0022414 GO:0022611 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0032501 GO:0032502 GO:0032504 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071695 GO:0071704 GO:0097437 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

872

Amino Acids

94.73

Weight (kDa)

5.03

Isoelectric Point (pI)

34.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	27 - 86	1e-10	Wall-associated receptor kinase galacturonan-binding
MatE	PF01554	426 - 585	1.4e-28	MatE
MatE	PF01554	647 - 807	1.1e-25	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca	FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica	MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica	Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis	pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis	RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata	RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora	Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii	Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa	Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha	Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana	Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	4 cut(s)	122, 420, 491, 2447
AccB1I	GGYRCC	1 cut(s)	209
AccII	CGCG	4 cut(s)	997, 1618, 1620, 2555
AciI	CCGC	7 cut(s)	372, 754, 997, 1124, 1173, 1620, 2555
AclWI	GGATC	2 cut(s)	899, 912
AcoI	YGGCCR	3 cut(s)	381, 1333, 2142
AcsI	RAATTY	3 cut(s)	634, 1185, 2147
AcuI	CTGAAG	2 cut(s)	33, 1661
AcyI	GRCGYC	1 cut(s)	2253
AfiI	CCNNNNNNNGG	3 cut(s)	429, 843, 986
AflII	CTTAAG	1 cut(s)	820
AflIII	ACRYGT	2 cut(s)	351, 1710
AhlI	ACTAGT	3 cut(s)	19, 542, 2441
AjnI	CCWGG	1 cut(s)	931
AleI	CACNNNNGTG	1 cut(s)	1216
Alw26I	GTCTC	1 cut(s)	1083
AlwI	GGATC	2 cut(s)	899, 912
AlwNI	CAGNNNCTG	1 cut(s)	2276
AoxI	GGCC	8 cut(s)	381, 1202, 1223, 1333, 1362, 1913, 2080, 2142
ApeKI	GCWGC	9 cut(s)	471, 501, 1175, 1252, 1520, 1790, 2087, 2090, 2093
ApoI	RAATTY	3 cut(s)	634, 1185, 2147
Asp700I	GAANNNNTTC	1 cut(s)	353
AspA2I	CCTAGG	1 cut(s)	1226
AspLEI	GCGC	3 cut(s)	997, 1618, 1620
AspS9I	GGNCC	7 cut(s)	432, 667, 726, 1136, 1362, 1556, 2172
AsuC2I	CCSGG	2 cut(s)	424, 1153
AsuHPI	GGTGA	4 cut(s)	262, 382, 620, 1161
AsuNHI	GCTAGC	1 cut(s)	2293
AvaII	GGWCC	6 cut(s)	432, 667, 726, 1136, 1556, 2172
AvrII	CCTAGG	1 cut(s)	1226
BaeI	ACNNNNGTAYC	4 cut(s)	729, 762, 928, 961
BalI	TGGCCA	3 cut(s)	383, 1335, 2144
BamHI	GGATCC	1 cut(s)	904
BanI	GGYRCC	1 cut(s)	209
BanII	GRGCYC	2 cut(s)	851, 2001
BbsI	GAAGAC	1 cut(s)	2402
BbvCI	CCTCAGC	1 cut(s)	2541
BbvI	GCAGC	9 cut(s)	483, 488, 1162, 1239, 1532, 1777, 2074, 2077, 2105
BccI	CCATC	7 cut(s)	91, 599, 767, 1344, 1952, 2306, 2352
BceAI	ACGGC	1 cut(s)	223
BciT130I	CCWGG	1 cut(s)	933
BcnI	CCSGG	2 cut(s)	424, 1153
BcoDI	GTCTC	1 cut(s)	1083
BcuI	ACTAGT	3 cut(s)	19, 542, 2441
BfmI	CTRYAG	3 cut(s)	360, 1206, 2091
BfrI	CTTAAG	1 cut(s)	820
BfuAI	ACCTGC	4 cut(s)	122, 420, 491, 2447
BglII	AGATCT	1 cut(s)	2573
BlnI	CCTAGG	1 cut(s)	1226
BlpI	GCTNAGC	1 cut(s)	1307
BmcAI	AGTACT	2 cut(s)	10, 18
Bme1390I	CCNGG	3 cut(s)	424, 933, 1153
Bme18I	GGWCC	6 cut(s)	432, 667, 726, 1136, 1556, 2172
BmgT120I	GGNCC	7 cut(s)	432, 667, 726, 1136, 1362, 1556, 2172
BmiI	GGNNCC	8 cut(s)	211, 727, 906, 1363, 1459, 1673, 2000, 2173
BmrFI	CCNGG	3 cut(s)	424, 933, 1153
BmrI	ACTGGG	2 cut(s)	2068, 2542
BmsI	GCATC	5 cut(s)	38, 869, 959, 2187, 2527
BmtI	GCTAGC	1 cut(s)	2297
BmuI	ACTGGG	2 cut(s)	2068, 2542
BpiI	GAAGAC	1 cut(s)	2402
BplI	GAGNNNNNCTC	2 cut(s)	1713, 1745
BpmI	CTGGAG	2 cut(s)	239, 915
Bpu10I	CCTNAGC	2 cut(s)	1025, 2541
Bpu1102I	GCTNAGC	1 cut(s)	1307
BpuEI	CTTGAG	1 cut(s)	858
BpuMI	CCSGG	2 cut(s)	424, 1153
BsaAI	YACGTR	1 cut(s)	1833
BsaHI	GRCGYC	1 cut(s)	2253
BsaJI	CCNNGG	7 cut(s)	678, 932, 1098, 1132, 1226, 1387, 1572
BsaWI	WCCGGW	1 cut(s)	1268
BsaXI	ACNNNNNCTCC	4 cut(s)	172, 202, 1952, 1982
Bsc4I	CCNNNNNNNGG	3 cut(s)	429, 843, 986
Bse118I	RCCGGY	1 cut(s)	986
Bse1I	ACTGG	7 cut(s)	158, 187, 657, 1550, 1885, 2063, 2537
Bse3DI	GCAATG	1 cut(s)	493
BseBI	CCWGG	1 cut(s)	933
BseDI	CCNNGG	7 cut(s)	678, 932, 1098, 1132, 1226, 1387, 1572
BseGI	GGATG	8 cut(s)	513, 884, 974, 2131, 2178, 2363, 2478, 2542
BseLI	CCNNNNNNNGG	3 cut(s)	429, 843, 986
BseMI	GCAATG	1 cut(s)	493
BseMII	CTCAG	9 cut(s)	1016, 1080, 1094, 1321, 1331, 1793, 2349, 2532, 2550
BseNI	ACTGG	7 cut(s)	158, 187, 657, 1550, 1885, 2063, 2537
BsePI	GCGCGC	1 cut(s)	1616
BseRI	GAGGAG	1 cut(s)	1121
BseXI	GCAGC	9 cut(s)	483, 488, 1162, 1239, 1532, 1777, 2074, 2077, 2105
BseYI	CCCAGC	1 cut(s)	1358
BsgI	GTGCAG	1 cut(s)	448
Bsh1236I	CGCG	4 cut(s)	997, 1618, 1620, 2555
BshFI	GGCC	8 cut(s)	383, 1204, 1225, 1335, 1364, 1915, 2082, 2144
BshNI	GGYRCC	1 cut(s)	209
BsiSI	CCGG	4 cut(s)	423, 987, 1153, 1269
BslFI	GGGAC	6 cut(s)	659, 739, 1590, 1920, 2075, 2185
BslI	CCNNNNNNNGG	3 cut(s)	429, 843, 986
BsmAI	GTCTC	1 cut(s)	1083
BsmFI	GGGAC	6 cut(s)	659, 739, 1590, 1920, 2075, 2185
BsmI	GAATGC	1 cut(s)	2319
BsnI	GGCC	8 cut(s)	383, 1204, 1225, 1335, 1364, 1915, 2082, 2144
Bsp1286I	GDGCHC	2 cut(s)	851, 2001
Bsp1407I	TGTACA	1 cut(s)	1429
Bsp143I	GATC	2 cut(s)	904, 2573
Bsp1720I	GCTNAGC	1 cut(s)	1307
Bsp19I	CCATGG	2 cut(s)	1098, 1572
BspACI	CCGC	7 cut(s)	372, 754, 997, 1124, 1173, 1620, 2555
BspANI	GGCC	8 cut(s)	383, 1204, 1225, 1335, 1364, 1915, 2082, 2144
BspCNI	CTCAG	9 cut(s)	1017, 1081, 1093, 1320, 1332, 1794, 2348, 2533, 2551
BspFNI	CGCG	4 cut(s)	997, 1618, 1620, 2555
BspHI	TCATGA	1 cut(s)	145
BspLI	GGNNCC	8 cut(s)	211, 727, 906, 1363, 1459, 1673, 2000, 2173
BspMAI	CTGCAG	2 cut(s)	364, 2095
BspMI	ACCTGC	4 cut(s)	122, 420, 491, 2447
BspOI	GCTAGC	1 cut(s)	2297
BspPI	GGATC	2 cut(s)	899, 912
BspQI	GCTCTTC	1 cut(s)	808
BspT107I	GGYRCC	1 cut(s)	209
BspTI	CTTAAG	1 cut(s)	820
BsrDI	GCAATG	1 cut(s)	493
BsrFI	RCCGGY	1 cut(s)	986
BsrGI	TGTACA	1 cut(s)	1429
BsrI	ACTGG	7 cut(s)	158, 187, 657, 1550, 1885, 2063, 2537
BssAI	RCCGGY	1 cut(s)	986
BssECI	CCNNGG	7 cut(s)	678, 932, 1098, 1132, 1226, 1387, 1572
BssHII	GCGCGC	1 cut(s)	1616
BssMI	GATC	2 cut(s)	904, 2573
BssNI	GRCGYC	1 cut(s)	2253
BssT1I	CCWWGG	4 cut(s)	1098, 1226, 1387, 1572
Bst2UI	CCWGG	1 cut(s)	933
Bst4CI	ACNGT	3 cut(s)	511, 1050, 1438
Bst6I	CTCTTC	2 cut(s)	808, 2564
BstACI	GRCGYC	1 cut(s)	2253
BstAFI	CTTAAG	1 cut(s)	820
BstAPI	GCANNNNNTGC	1 cut(s)	2074
BstAUI	TGTACA	1 cut(s)	1429
BstBAI	YACGTR	1 cut(s)	1833
BstC8I	GCNNGC	8 cut(s)	555, 1356, 1449, 1618, 2098, 2237, 2295, 2364
BstDSI	CCRYGG	3 cut(s)	678, 1098, 1572
BstF5I	GGATG	8 cut(s)	513, 884, 974, 2131, 2178, 2363, 2478, 2542
BstFNI	CGCG	4 cut(s)	997, 1618, 1620, 2555
BstHHI	GCGC	3 cut(s)	997, 1618, 1620
BstKTI	GATC	2 cut(s)	907, 2576
BstMAI	GTCTC	1 cut(s)	1083
BstMBI	GATC	2 cut(s)	904, 2573
BstNI	CCWGG	1 cut(s)	933
BstNSI	RCATGY	4 cut(s)	355, 1306, 1714, 2068
BstSCI	CCNGG	3 cut(s)	422, 931, 1151
BstSFI	CTRYAG	3 cut(s)	360, 1206, 2091
BstSNI	TACGTA	1 cut(s)	1833
BstUI	CGCG	4 cut(s)	997, 1618, 1620, 2555
BstV1I	GCAGC	9 cut(s)	483, 488, 1162, 1239, 1532, 1777, 2074, 2077, 2105
BstV2I	GAAGAC	1 cut(s)	2402
BstX2I	RGATCY	2 cut(s)	904, 2573
BstXI	CCANNNNNNTGG	1 cut(s)	664
BstYI	RGATCY	2 cut(s)	904, 2573
BsuRI	GGCC	8 cut(s)	383, 1204, 1225, 1335, 1364, 1915, 2082, 2144
BtgI	CCRYGG	3 cut(s)	678, 1098, 1572
BtgZI	GCGATG	1 cut(s)	69
BtsCI	GGATG	8 cut(s)	513, 884, 974, 2131, 2178, 2363, 2478, 2542
BtsI	GCAGTG	2 cut(s)	357, 2517
BtsIMutI	CAGTG	7 cut(s)	180, 285, 357, 664, 1799, 2206, 2517
BveI	ACCTGC	4 cut(s)	122, 420, 491, 2447
Cac8I	GCNNGC	8 cut(s)	555, 1356, 1449, 1618, 2098, 2237, 2295, 2364
CaiI	CAGNNNCTG	1 cut(s)	2276
CciI	TCATGA	1 cut(s)	145
CfoI	GCGC	3 cut(s)	997, 1618, 1620
Cfr10I	RCCGGY	1 cut(s)	986
Cfr13I	GGNCC	7 cut(s)	432, 667, 726, 1136, 1362, 1556, 2172
CseI	GACGC	1 cut(s)	2261
DpnI	GATC	2 cut(s)	906, 2575
DpnII	GATC	2 cut(s)	904, 2573
DraI	TTTAAA	1 cut(s)	733
EaeI	YGGCCR	3 cut(s)	381, 1333, 2142
Eam1104I	CTCTTC	2 cut(s)	808, 2564
EarI	CTCTTC	2 cut(s)	808, 2564
Eco105I	TACGTA	1 cut(s)	1833
Eco130I	CCWWGG	4 cut(s)	1098, 1226, 1387, 1572
Eco147I	AGGCCT	2 cut(s)	1204, 2082
Eco24I	GRGCYC	2 cut(s)	851, 2001
Eco32I	GATATC	1 cut(s)	889
Eco47I	GGWCC	6 cut(s)	432, 667, 726, 1136, 1556, 2172
Eco57I	CTGAAG	2 cut(s)	33, 1661
EcoO109I	RGGNCCY	2 cut(s)	726, 1362
EcoRII	CCWGG	1 cut(s)	931
EcoRV	GATATC	1 cut(s)	889
EcoT14I	CCWWGG	4 cut(s)	1098, 1226, 1387, 1572
EcoT22I	ATGCAT	3 cut(s)	595, 884, 1645
EcoT38I	GRGCYC	2 cut(s)	851, 2001
ErhI	CCWWGG	4 cut(s)	1098, 1226, 1387, 1572
FaqI	GGGAC	6 cut(s)	659, 739, 1590, 1920, 2075, 2185
FauI	CCCGC	2 cut(s)	990, 1180
FauNDI	CATATG	2 cut(s)	811, 1015
FokI	GGATG	8 cut(s)	500, 891, 981, 2118, 2165, 2370, 2485, 2549
FriOI	GRGCYC	2 cut(s)	851, 2001
GlaI	GCGC	3 cut(s)	996, 1617, 1619
GsaI	CCCAGC	1 cut(s)	1362
GsuI	CTGGAG	2 cut(s)	239, 915
HaeIII	GGCC	8 cut(s)	383, 1204, 1225, 1335, 1364, 1915, 2082, 2144
HapII	CCGG	4 cut(s)	423, 987, 1153, 1269
HgaI	GACGC	1 cut(s)	2261
HhaI	GCGC	3 cut(s)	997, 1618, 1620
Hin1I	GRCGYC	1 cut(s)	2253
Hin6I	GCGC	3 cut(s)	995, 1616, 1618
HinP1I	GCGC	3 cut(s)	995, 1616, 1618
HincII	GTYRAC	1 cut(s)	313
HindII	GTYRAC	1 cut(s)	313
HinfI	GANTC	7 cut(s)	620, 815, 1142, 1156, 1244, 1383, 2027
HpaII	CCGG	4 cut(s)	423, 987, 1153, 1269
HphI	GGTGA	4 cut(s)	262, 382, 620, 1161
Hpy166II	GTNNAC	6 cut(s)	313, 357, 1696, 1771, 2383, 2551
Hpy188I	TCNGA	8 cut(s)	34, 260, 436, 1111, 1136, 1341, 1585, 2278
Hpy188III	TCNNGA	9 cut(s)	146, 202, 218, 908, 1024, 1160, 1905, 2182, 2311
Hpy8I	GTNNAC	6 cut(s)	313, 357, 1696, 1771, 2383, 2551
Hpy99I	CGWCG	1 cut(s)	1054
HpyAV	CCTTC	6 cut(s)	236, 283, 544, 1194, 1685, 1742
HpyCH4III	ACNGT	3 cut(s)	511, 1050, 1438
HpyCH4IV	ACGT	2 cut(s)	939, 1832
HpySE526I	ACGT	2 cut(s)	939, 1832
Hsp92I	GRCGYC	1 cut(s)	2253
HspAI	GCGC	3 cut(s)	995, 1616, 1618
Kzo9I	GATC	2 cut(s)	904, 2573
LguI	GCTCTTC	1 cut(s)	808
LmnI	GCTCC	9 cut(s)	128, 682, 1111, 1195, 1351, 1457, 1472, 1517, 2004
Lsp1109I	GCAGC	9 cut(s)	483, 488, 1162, 1239, 1532, 1777, 2074, 2077, 2105
LweI	GCATC	5 cut(s)	38, 869, 959, 2187, 2527
MaeII	ACGT	2 cut(s)	939, 1832
MaeIII	GTNAC	8 cut(s)	137, 170, 409, 1006, 1044, 1167, 1315, 2249
MalI	GATC	2 cut(s)	906, 2575
MboI	GATC	2 cut(s)	904, 2573
MboII	GAAGA	5 cut(s)	358, 795, 860, 2402, 2581
MfeI	CAATTG	4 cut(s)	1179, 2346, 2415, 2591
MflI	RGATCY	2 cut(s)	904, 2573
MhlI	GDGCHC	2 cut(s)	851, 2001
MlsI	TGGCCA	3 cut(s)	383, 1335, 2144
MluNI	TGGCCA	3 cut(s)	383, 1335, 2144
MlyI	GAGTC	4 cut(s)	629, 1136, 1253, 2021
MmeI	TCCRAC	1 cut(s)	1089
Mox20I	TGGCCA	3 cut(s)	383, 1335, 2144
Mph1103I	ATGCAT	3 cut(s)	595, 884, 1645
MroXI	GAANNNNTTC	1 cut(s)	353
MscI	TGGCCA	3 cut(s)	383, 1335, 2144
MseI	TTAA	5 cut(s)	732, 821, 1002, 1625, 1923
MslI	CAYNNNNRTG	3 cut(s)	1216, 1322, 1341
Msp20I	TGGCCA	3 cut(s)	383, 1335, 2144
MspA1I	CMGCKG	1 cut(s)	1175
MspCI	CTTAAG	1 cut(s)	820
MspI	CCGG	4 cut(s)	423, 987, 1153, 1269
MspR9I	CCNGG	3 cut(s)	424, 933, 1153
MunI	CAATTG	4 cut(s)	1179, 2346, 2415, 2591
Mva1269I	GAATGC	1 cut(s)	2319
MvaI	CCWGG	1 cut(s)	933
MvnI	CGCG	4 cut(s)	997, 1618, 1620, 2555
NciI	CCSGG	2 cut(s)	424, 1153
NcoI	CCATGG	2 cut(s)	1098, 1572
NdeI	CATATG	2 cut(s)	811, 1015
NdeII	GATC	2 cut(s)	904, 2573
NheI	GCTAGC	1 cut(s)	2293
NlaIV	GGNNCC	8 cut(s)	211, 727, 906, 1363, 1459, 1673, 2000, 2173
NmuCI	GTSAC	4 cut(s)	170, 1167, 1315, 2249
NsiI	ATGCAT	3 cut(s)	595, 884, 1645
NspI	RCATGY	4 cut(s)	355, 1306, 1714, 2068
OliI	CACNNNNGTG	1 cut(s)	1216
PagI	TCATGA	1 cut(s)	145
PauI	GCGCGC	1 cut(s)	1616
PceI	AGGCCT	2 cut(s)	1204, 2082
PciI	ACATGT	2 cut(s)	351, 1710
PciSI	GCTCTTC	1 cut(s)	808
PctI	GAATGC	1 cut(s)	2319
PdmI	GAANNNNTTC	1 cut(s)	353
PfeI	GAWTC	3 cut(s)	815, 1156, 1383
PflFI	GACNNNGTC	1 cut(s)	671
PfoI	TCCNGGA	1 cut(s)	1151
PleI	GAGTC	4 cut(s)	628, 1136, 1252, 2021
PpsI	GAGTC	4 cut(s)	628, 1136, 1252, 2021
Ppu21I	YACGTR	1 cut(s)	1833
PpuMI	RGGWCCY	1 cut(s)	726
PscI	ACATGT	2 cut(s)	351, 1710
Psp5II	RGGWCCY	1 cut(s)	726
Psp6I	CCWGG	1 cut(s)	931
PspFI	CCCAGC	1 cut(s)	1358
PspGI	CCWGG	1 cut(s)	931
PspN4I	GGNNCC	8 cut(s)	211, 727, 906, 1363, 1459, 1673, 2000, 2173
PspPI	GGNCC	7 cut(s)	432, 667, 726, 1136, 1362, 1556, 2172
PspPPI	RGGWCCY	1 cut(s)	726
PstI	CTGCAG	2 cut(s)	364, 2095
PstNI	CAGNNNCTG	1 cut(s)	2276
PsuI	RGATCY	2 cut(s)	904, 2573
PsyI	GACNNNGTC	1 cut(s)	671
PteI	GCGCGC	1 cut(s)	1616
RseI	CAYNNNNRTG	3 cut(s)	1216, 1322, 1341
SapI	GCTCTTC	1 cut(s)	808
SaqAI	TTAA	5 cut(s)	732, 821, 1002, 1625, 1923
Sau3AI	GATC	2 cut(s)	904, 2573
Sau96I	GGNCC	7 cut(s)	432, 667, 726, 1136, 1362, 1556, 2172
ScaI	AGTACT	2 cut(s)	10, 18
SchI	GAGTC	4 cut(s)	629, 1136, 1253, 2021
ScrFI	CCNGG	3 cut(s)	424, 933, 1153
SduI	GDGCHC	2 cut(s)	851, 2001
SfaNI	GCATC	5 cut(s)	38, 869, 959, 2187, 2527
SfcI	CTRYAG	3 cut(s)	360, 1206, 2091
SinI	GGWCC	6 cut(s)	432, 667, 726, 1136, 1556, 2172
SmiMI	CAYNNNNRTG	3 cut(s)	1216, 1322, 1341
SmlI	CTYRAG	2 cut(s)	820, 873
SmoI	CTYRAG	2 cut(s)	820, 873
SnaBI	TACGTA	1 cut(s)	1833
SpeI	ACTAGT	3 cut(s)	19, 542, 2441
SseBI	AGGCCT	2 cut(s)	1204, 2082
SsiI	CCGC	7 cut(s)	372, 754, 997, 1124, 1173, 1620, 2555
SspI	AATATT	1 cut(s)	646
StuI	AGGCCT	2 cut(s)	1204, 2082
StyD4I	CCNGG	3 cut(s)	422, 931, 1151
StyI	CCWWGG	4 cut(s)	1098, 1226, 1387, 1572
TaaI	ACNGT	3 cut(s)	511, 1050, 1438
TaiI	ACGT	2 cut(s)	942, 1835
TaqI	TCGA	2 cut(s)	1247, 2104
TaqII	GACCGA	1 cut(s)	2396
TatI	WGTACW	5 cut(s)	8, 16, 1018, 1429, 1542
TauI	GCSGC	3 cut(s)	1126, 1623, 2558
TfiI	GAWTC	3 cut(s)	815, 1156, 1383
Tru1I	TTAA	5 cut(s)	732, 821, 1002, 1625, 1923
Tru9I	TTAA	5 cut(s)	732, 821, 1002, 1625, 1923
TscAI	CASTG	7 cut(s)	187, 292, 364, 664, 1806, 2206, 2524
TseFI	GTSAC	4 cut(s)	170, 1167, 1315, 2249
TseI	GCWGC	9 cut(s)	471, 501, 1175, 1252, 1520, 1790, 2087, 2090, 2093
Tsp45I	GTSAC	4 cut(s)	170, 1167, 1315, 2249
TspDTI	ATGAA	8 cut(s)	134, 570, 795, 828, 909, 1002, 1263, 2060
TspGWI	ACGGA	2 cut(s)	1470, 1485
TspRI	CASTG	7 cut(s)	187, 292, 364, 664, 1806, 2206, 2524
Tth111I	GACNNNGTC	1 cut(s)	671
Vha464I	CTTAAG	1 cut(s)	820
VpaK11BI	GGWCC	6 cut(s)	432, 667, 726, 1136, 1556, 2172
XapI	RAATTY	3 cut(s)	634, 1185, 2147
XceI	RCATGY	4 cut(s)	355, 1306, 1714, 2068
XcmI	CCANNNNNNNNNTGG	1 cut(s)	661
XmaJI	CCTAGG	1 cut(s)	1226
XmnI	GAANNNNTTC	1 cut(s)	353
ZrmI	AGTACT	2 cut(s)	10, 18
Zsp2I	ATGCAT	3 cut(s)	595, 884, 1645

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.