RchiOBHm_Chr7g0225971

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
48953935 .. 48956802
2868 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20240

Sequence Viewer

Length: 1863 bp
ATGAGGTCAAATAATCAAACTGTTGGCGGCTGTATGTCAACTTGTGGTGACAACACCGTCGGCAATGGTTGTATTGGTACTAACTGTTGCCAGACTATTCTTCCTCAATATCTCAGTGAGATAAGTACTAAGTTGCAATCTGAATCTGCAGAAGCAGATAGCGGAAAGCAACCAGATGCAATATTATCTGCCCATAGCTATGCATTTATGGTTGACCAAGAATGGTTTCAAAATAATATATCATATTTTGGAGACATCAAGGATATGGACAACGTTCCTGTGGTGCTAGAATGGAGGTTAAGCTTAGACAAGAACAGTTCATCATTCACATCGTATGAAAAATTCATTGCAAAGACATATTTGGGTTTTACTTTATCGAGTATACCATATATGGGTAATTCGTTATTTGATTCCTTACAATATTTTCGGAATATAACGTTGCGACAAGATGATGACCCAACACCGTATTGCAATTTATTTAATGCCACTTCTCCGACAAACAATCTTCCAATGCTTCAGTGTTTCTGTCCGGCCGGCTATGATGGAAACCCCTTTCTCGTCCAACCTTGTCAAGATATCGATGAGTGTCAGGAAGACATTCCGTGTATGGGCTATGATACTGCTGCTCAAAAATGGAATTTCAGTGGTGGTTCTTGTCAAAATACTGATGGGGGTCATATATGCTACTCGAGTATAGATAGCGTTGCTTGTGAATTTCATGGTGGATGGAGTGGACAAGAATGTGGTATATACCTGGGTTTTGCATTGTTGTTACTATTCATTGCTGCACGGTATGTTTACACAGCCATAAACAAAAAGAAACATATTATCCGCAAGAAAATGTTTTTCAAGAGAAATGGAGGCTTATTGTTAGAGCAACAATTACGGTTTGCTAAAATTAATGGTGAGAAGATCAAGCTCTTCAAATCAAAAGAATTAGAGAAGTCCACTGACAATTTTAGTATAAATAGAATTCTTGGACATGGAGGTCATGGTACTGTGTATAAAGGGATGTTGAAGGATGGAAGAATTGTTGCTGTAAAGAAGTCTAAACTGGTAGATGAAAGCAAGCTTGCAGAATTCATCAATGAAGTTGTCATTCTTTCAGAAATCAAACACAGGAATGTAGTTAAATTGCTGGGTTGTTGTTTAGAGACTGAAATTCCTATTGTAGTGTATGAATTCATACCTAATGGAACGCTCTTCCAGTATATCCATGATGAGAAGAATGAGGAATTTCCACTTACATGGAAAATGCGCTTACGTATTGCCACAGAAATTGCAGGAGCTCTTTCCTACTTACATGCTACAGCTTCATGTCCCATTTATCACAGAGACATTAAGTCTACCAACATCCTCTTAGATGAAAAATATAGAGCTAAAATTGCTGACTTTGGAACTTCTAGATCAGTTGCTATTGACCAAACTCACTTGACCACACTTGTACATGGGACATTTGGTTACTTGGACCCTGAGTACTTCCGATCAAGCAAATTTACAGAGAAAAGTGATGTGTATAGCTTCGGGGTTGTCCTCGTTGAGCTCTTAACAGGGAAGAAACCAGTTTCCGCGATAAAAGTGTTGAAACAAGAAGAAGAATACCAGAGTCTTGTTGCATGTTTCATTATATTGATGCAAGAAAATCGTTTATTTGACATTGTTGATGAACAGGTTTCAAAGGAGGGTTCTAAAAAAGATATTAGAATAGTTGCTAACCTTGCAGAGAAATGTTTGGATTTGAATGGAAGGAAGCGCCCTACAATGAGAGAAGTCACAACTGAGTTGGAAGTCATCCAAATGTCAAAAACGACTTCAATTATTGAACAAATTTATGAAGATGTTGAACTTCCATGTCAAGGATAG

Protein Analysis

620

Amino Acids

69.86

Weight (kDa)

5.76

Isoelectric Point (pI)

39.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 321 - 592 1.4e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 322 - 595 1.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 56, 987
AccI GTMKAC 2 cut(s) 382, 1346
AccII CGCG 1 cut(s) 1571
AciI CCGC 4 cut(s) 27, 162, 832, 1569
AclI AACGTT 2 cut(s) 273, 437
AcoI YGGCCR 1 cut(s) 531
AcuI CTGAAG 1 cut(s) 500
AfaI GTAC 5 cut(s) 79, 127, 997, 1446, 1478
AfiI CCNNNNNNNGG 3 cut(s) 392, 608, 1856
AhdI GACNNNNNGTC 1 cut(s) 1342
AjnI CCWGG 1 cut(s) 753
AjuI GAANNNNNNNTTGG 2 cut(s) 210, 242
AluBI AGCT 9 cut(s) 198, 303, 919, 1072, 1289, 1313, 1379, 1521, 1543
AluI AGCT 9 cut(s) 198, 303, 919, 1072, 1289, 1313, 1379, 1521, 1543
Alw21I GWGCWC 2 cut(s) 1291, 1545
Alw26I GTCTC 3 cut(s) 246, 1148, 1329
Ama87I CYCGRG 1 cut(s) 688
AoxI GGCC 1 cut(s) 531
ApeKI GCWGC 2 cut(s) 623, 785
AseI ATTAAT 1 cut(s) 900
Asp700I GAANNNNTTC 2 cut(s) 225, 597
AspLEI GCGC 2 cut(s) 1260, 1755
AspS9I GGNCC 1 cut(s) 1468
AsuHPI GGTGA 2 cut(s) 59, 917
AvaI CYCGRG 1 cut(s) 688
AvaII GGWCC 1 cut(s) 1468
BanII GRGCYC 2 cut(s) 1291, 1545
BbsI GAAGAC 1 cut(s) 600
Bbv12I GWGCWC 2 cut(s) 1291, 1545
BbvI GCAGC 2 cut(s) 610, 772
BccI CCATC 4 cut(s) 536, 662, 720, 1016
BcgI CGANNNNNNTGC 2 cut(s) 1625, 1659
BciT130I CCWGG 1 cut(s) 755
BcoDI GTCTC 3 cut(s) 246, 1148, 1329
BfaI CTAG 2 cut(s) 287, 1404
BfmI CTRYAG 2 cut(s) 147, 1308
BfoI RGCGCY 1 cut(s) 1756
BisI GCNGC 3 cut(s) 28, 624, 786
BlsI GCNGC 3 cut(s) 29, 625, 787
BmcAI AGTACT 2 cut(s) 127, 1478
Bme1390I CCNGG 1 cut(s) 755
Bme18I GGWCC 1 cut(s) 1468
BmeRI GACNNNNNGTC 1 cut(s) 1342
BmeT110I CYCGRG 1 cut(s) 688
BmgT120I GGNCC 1 cut(s) 1468
BmiI GGNNCC 1 cut(s) 1470
BmrFI CCNGG 1 cut(s) 755
BmsI GCATC 2 cut(s) 166, 1623
BpiI GAAGAC 1 cut(s) 600
Bsa29I ATCGAT 1 cut(s) 579
BsaAI YACGTR 1 cut(s) 1265
BsaJI CCNNGG 1 cut(s) 754
Bsc4I CCNNNNNNNGG 3 cut(s) 392, 608, 1856
Bse118I RCCGGY 1 cut(s) 533
Bse1I ACTGG 3 cut(s) 1059, 1207, 1562
Bse3DI GCAATG 3 cut(s) 70, 345, 780
BseBI CCWGG 1 cut(s) 755
BseCI ATCGAT 1 cut(s) 579
BseDI CCNNGG 1 cut(s) 754
BseGI GGATG 5 cut(s) 731, 1017, 1027, 1353, 1791
BseLI CCNNNNNNNGG 3 cut(s) 392, 608, 1856
BseMI GCAATG 3 cut(s) 70, 345, 780
BseMII CTCAG 3 cut(s) 127, 1464, 1770
BseNI ACTGG 3 cut(s) 1059, 1207, 1562
BseX3I CGGCCG 1 cut(s) 531
BseXI GCAGC 2 cut(s) 610, 772
BseYI CCCAGC 1 cut(s) 1138
BsgI GTGCAG 1 cut(s) 771
Bsh1236I CGCG 1 cut(s) 1571
Bsh1285I CGRYCG 1 cut(s) 534
BshFI GGCC 1 cut(s) 533
BshVI ATCGAT 1 cut(s) 579
BsiEI CGRYCG 1 cut(s) 534
BsiHKAI GWGCWC 2 cut(s) 1291, 1545
BsiHKCI CYCGRG 1 cut(s) 688
BsiSI CCGG 2 cut(s) 530, 534
BslFI GGGAC 2 cut(s) 1305, 1465
BslI CCNNNNNNNGG 3 cut(s) 392, 608, 1856
BsmAI GTCTC 3 cut(s) 246, 1148, 1329
BsmFI GGGAC 2 cut(s) 1305, 1465
BsnI GGCC 1 cut(s) 533
BsoBI CYCGRG 1 cut(s) 688
Bsp1286I GDGCHC 2 cut(s) 1291, 1545
Bsp1407I TGTACA 1 cut(s) 1444
Bsp143I GATC 3 cut(s) 912, 1406, 1484
BspACI CCGC 4 cut(s) 27, 162, 832, 1569
BspANI GGCC 1 cut(s) 533
BspCNI CTCAG 3 cut(s) 126, 1465, 1771
BspDI ATCGAT 1 cut(s) 579
BspFNI CGCG 1 cut(s) 1571
BspLI GGNNCC 1 cut(s) 1470
BspMAI CTGCAG 1 cut(s) 151
BspQI GCTCTTC 2 cut(s) 926, 1208
BsrDI GCAATG 3 cut(s) 70, 345, 780
BsrFI RCCGGY 1 cut(s) 533
BsrGI TGTACA 1 cut(s) 1444
BsrI ACTGG 3 cut(s) 1059, 1207, 1562
BssAI RCCGGY 1 cut(s) 533
BssECI CCNNGG 1 cut(s) 754
BssMI GATC 3 cut(s) 912, 1406, 1484
BssNAI GTATAC 1 cut(s) 383
Bst1107I GTATAC 1 cut(s) 383
Bst2UI CCWGG 1 cut(s) 755
Bst4CI ACNGT 8 cut(s) 22, 58, 86, 317, 465, 792, 888, 1000
Bst6I CTCTTC 2 cut(s) 926, 1208
BstAUI TGTACA 1 cut(s) 1444
BstBAI YACGTR 1 cut(s) 1265
BstC8I GCNNGC 3 cut(s) 535, 1070, 1074
BstDEI CTNAG 6 cut(s) 113, 129, 304, 1360, 1473, 1779
BstF5I GGATG 5 cut(s) 731, 1017, 1027, 1353, 1791
BstFNI CGCG 1 cut(s) 1571
BstH2I RGCGCY 1 cut(s) 1756
BstHHI GCGC 2 cut(s) 1260, 1755
BstKTI GATC 3 cut(s) 915, 1409, 1487
BstMAI GTCTC 3 cut(s) 246, 1148, 1329
BstMBI GATC 3 cut(s) 912, 1406, 1484
BstMCI CGRYCG 1 cut(s) 534
BstMWI GCNNNNNNNGC 2 cut(s) 1385, 1718
BstNI CCWGG 1 cut(s) 755
BstNSI RCATGY 2 cut(s) 1307, 1620
BstSCI CCNGG 1 cut(s) 753
BstSFI CTRYAG 2 cut(s) 147, 1308
BstSNI TACGTA 1 cut(s) 1265
BstUI CGCG 1 cut(s) 1571
BstV1I GCAGC 2 cut(s) 610, 772
BstV2I GAAGAC 1 cut(s) 600
BstXI CCANNNNNNTGG 1 cut(s) 1248
BstZ17I GTATAC 1 cut(s) 383
BstZI CGGCCG 1 cut(s) 531
Bsu15I ATCGAT 1 cut(s) 579
BsuRI GGCC 1 cut(s) 533
BsuTUI ATCGAT 1 cut(s) 579
BtsCI GGATG 5 cut(s) 731, 1017, 1027, 1353, 1791
BtsIMutI CAGTG 4 cut(s) 121, 524, 649, 948
Cac8I GCNNGC 3 cut(s) 535, 1070, 1074
CfoI GCGC 2 cut(s) 1260, 1755
Cfr10I RCCGGY 1 cut(s) 533
Cfr13I GGNCC 1 cut(s) 1468
ClaI ATCGAT 1 cut(s) 579
Csp6I GTAC 5 cut(s) 78, 126, 996, 1445, 1477
CspCI CAANNNNNGTGG 2 cut(s) 1261, 1296
CviQI GTAC 5 cut(s) 78, 126, 996, 1445, 1477
DdeI CTNAG 6 cut(s) 113, 129, 304, 1360, 1473, 1779
DpnI GATC 3 cut(s) 914, 1408, 1486
DpnII GATC 3 cut(s) 912, 1406, 1484
DrdI GACNNNNNNGTC 2 cut(s) 56, 987
DriI GACNNNNNGTC 1 cut(s) 1342
DseDI GACNNNNNNGTC 2 cut(s) 56, 987
EaeI YGGCCR 1 cut(s) 531
EagI CGGCCG 1 cut(s) 531
Eam1104I CTCTTC 2 cut(s) 926, 1208
Eam1105I GACNNNNNGTC 1 cut(s) 1342
EarI CTCTTC 2 cut(s) 926, 1208
Ecl136II GAGCTC 2 cut(s) 1289, 1543
EclXI CGGCCG 1 cut(s) 531
Eco105I TACGTA 1 cut(s) 1265
Eco24I GRGCYC 2 cut(s) 1291, 1545
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 1 cut(s) 1468
Eco52I CGGCCG 1 cut(s) 531
Eco53kI GAGCTC 2 cut(s) 1289, 1543
Eco57I CTGAAG 1 cut(s) 500
Eco88I CYCGRG 1 cut(s) 688
EcoICRI GAGCTC 2 cut(s) 1289, 1543
EcoRI GAATTC 3 cut(s) 972, 1079, 1181
EcoRII CCWGG 1 cut(s) 753
EcoRV GATATC 1 cut(s) 577
EcoT22I ATGCAT 1 cut(s) 205
EcoT38I GRGCYC 2 cut(s) 1291, 1545
FaqI GGGAC 2 cut(s) 1305, 1465
FblI GTMKAC 2 cut(s) 382, 1346
Fnu4HI GCNGC 3 cut(s) 28, 624, 786
FokI GGATG 5 cut(s) 738, 1024, 1034, 1340, 1778
FriOI GRGCYC 2 cut(s) 1291, 1545
Fsp4HI GCNGC 3 cut(s) 28, 624, 786
FspBI CTAG 2 cut(s) 287, 1404
GlaI GCGC 2 cut(s) 1259, 1754
GluI GCNGC 3 cut(s) 28, 624, 786
GsaI CCCAGC 1 cut(s) 1142
HaeII RGCGCY 1 cut(s) 1756
HaeIII GGCC 1 cut(s) 533
HapII CCGG 2 cut(s) 530, 534
HhaI GCGC 2 cut(s) 1260, 1755
Hin6I GCGC 2 cut(s) 1258, 1753
HinP1I GCGC 2 cut(s) 1258, 1753
HincII GTYRAC 2 cut(s) 39, 214
HindII GTYRAC 2 cut(s) 39, 214
HindIII AAGCTT 2 cut(s) 301, 1070
HinfI GANTC 3 cut(s) 143, 410, 1606
HpaII CCGG 2 cut(s) 530, 534
HphI GGTGA 2 cut(s) 59, 917
Hpy166II GTNNAC 7 cut(s) 39, 214, 383, 734, 799, 948, 1347
Hpy188I TCNGA 5 cut(s) 142, 429, 495, 1108, 1484
Hpy188III TCNNGA 4 cut(s) 572, 590, 850, 1404
Hpy8I GTNNAC 7 cut(s) 39, 214, 383, 734, 799, 948, 1347
Hpy99I CGWCG 1 cut(s) 62
HpyAV CCTTC 2 cut(s) 1012, 1740
HpyCH4III ACNGT 8 cut(s) 22, 58, 86, 317, 465, 792, 888, 1000
HpyCH4IV ACGT 3 cut(s) 273, 437, 1264
HpyF10VI GCNNNNNNNGC 2 cut(s) 1385, 1718
HpyF3I CTNAG 6 cut(s) 113, 129, 304, 1360, 1473, 1779
HpySE526I ACGT 3 cut(s) 273, 437, 1264
HspAI GCGC 2 cut(s) 1258, 1753
KroI GCCGGC 1 cut(s) 533
KroNI GCCGGC 1 cut(s) 535
Kzo9I GATC 3 cut(s) 912, 1406, 1484
LguI GCTCTTC 2 cut(s) 926, 1208
LmnI GCTCC 1 cut(s) 1286
Lsp1109I GCAGC 2 cut(s) 610, 772
LweI GCATC 2 cut(s) 166, 1623
MaeI CTAG 2 cut(s) 287, 1404
MaeII ACGT 3 cut(s) 273, 437, 1264
MaeIII GTNAC 4 cut(s) 47, 771, 1460, 1771
MalI GATC 3 cut(s) 914, 1408, 1486
MboI GATC 3 cut(s) 912, 1406, 1484
MhlI GDGCHC 2 cut(s) 1291, 1545
MlyI GAGTC 1 cut(s) 1615
MmeI TCCRAC 3 cut(s) 518, 586, 1764
MnlI CCTC 8 cut(s) 114, 288, 854, 980, 1225, 1367, 1544, 1675
Mph1103I ATGCAT 1 cut(s) 205
MroNI GCCGGC 1 cut(s) 533
MroXI GAANNNNTTC 2 cut(s) 225, 597
MseI TTAA 6 cut(s) 299, 480, 900, 1131, 1341, 1547
MslI CAYNNNNRTG 4 cut(s) 198, 1122, 1246, 1796
MspI CCGG 2 cut(s) 530, 534
MspR9I CCNGG 1 cut(s) 755
MvaI CCWGG 1 cut(s) 755
MvnI CGCG 1 cut(s) 1571
MwoI GCNNNNNNNGC 2 cut(s) 1385, 1718
NaeI GCCGGC 1 cut(s) 535
NdeII GATC 3 cut(s) 912, 1406, 1484
NgoMIV GCCGGC 1 cut(s) 533
NlaIV GGNNCC 1 cut(s) 1470
NmuCI GTSAC 2 cut(s) 47, 1771
NsiI ATGCAT 1 cut(s) 205
NspI RCATGY 2 cut(s) 1307, 1620
PaeR7I CTCGAG 1 cut(s) 688
PciSI GCTCTTC 2 cut(s) 926, 1208
PdiI GCCGGC 1 cut(s) 535
PdmI GAANNNNTTC 2 cut(s) 225, 597
PfeI GAWTC 2 cut(s) 143, 410
PkrI GCNGC 3 cut(s) 29, 625, 787
PleI GAGTC 1 cut(s) 1614
PpsI GAGTC 1 cut(s) 1614
Ppu21I YACGTR 1 cut(s) 1265
PshBI ATTAAT 1 cut(s) 900
Psp124BI GAGCTC 2 cut(s) 1291, 1545
Psp1406I AACGTT 2 cut(s) 273, 437
Psp6I CCWGG 1 cut(s) 753
PspFI CCCAGC 1 cut(s) 1138
PspGI CCWGG 1 cut(s) 753
PspN4I GGNNCC 1 cut(s) 1470
PspPI GGNCC 1 cut(s) 1468
PspXI VCTCGAGB 1 cut(s) 688
PstI CTGCAG 1 cut(s) 151
RsaI GTAC 5 cut(s) 79, 127, 997, 1446, 1478
RsaNI GTAC 5 cut(s) 78, 126, 996, 1445, 1477
RseI CAYNNNNRTG 4 cut(s) 198, 1122, 1246, 1796
SacI GAGCTC 2 cut(s) 1291, 1545
SapI GCTCTTC 2 cut(s) 926, 1208
SaqAI TTAA 6 cut(s) 299, 480, 900, 1131, 1341, 1547
SatI GCNGC 3 cut(s) 28, 624, 786
Sau3AI GATC 3 cut(s) 912, 1406, 1484
Sau96I GGNCC 1 cut(s) 1468
ScaI AGTACT 2 cut(s) 127, 1478
SchI GAGTC 1 cut(s) 1615
ScrFI CCNGG 1 cut(s) 755
SduI GDGCHC 2 cut(s) 1291, 1545
SfaNI GCATC 2 cut(s) 166, 1623
SfcI CTRYAG 2 cut(s) 147, 1308
Sfr274I CTCGAG 1 cut(s) 688
SinI GGWCC 1 cut(s) 1468
SlaI CTCGAG 1 cut(s) 688
SmiMI CAYNNNNRTG 4 cut(s) 198, 1122, 1246, 1796
SmlI CTYRAG 1 cut(s) 688
SmoI CTYRAG 1 cut(s) 688
SnaBI TACGTA 1 cut(s) 1265
SsiI CCGC 4 cut(s) 27, 162, 832, 1569
SspI AATATT 2 cut(s) 183, 422
SspMI CTAG 2 cut(s) 287, 1404
SstI GAGCTC 2 cut(s) 1291, 1545
StyD4I CCNGG 1 cut(s) 753
TaaI ACNGT 8 cut(s) 22, 58, 86, 317, 465, 792, 888, 1000
TaiI ACGT 3 cut(s) 276, 440, 1267
TaqI TCGA 3 cut(s) 377, 579, 689
TatI WGTACW 3 cut(s) 125, 1444, 1476
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 2 cut(s) 143, 410
Tru1I TTAA 6 cut(s) 299, 480, 900, 1131, 1341, 1547
Tru9I TTAA 6 cut(s) 299, 480, 900, 1131, 1341, 1547
TscAI CASTG 4 cut(s) 121, 524, 649, 955
TseFI GTSAC 2 cut(s) 47, 1771
TseI GCWGC 2 cut(s) 623, 785
Tsp45I GTSAC 2 cut(s) 47, 1771
TspGWI ACGGA 1 cut(s) 591
TspRI CASTG 4 cut(s) 121, 524, 649, 955
VpaK11BI GGWCC 1 cut(s) 1468
VspI ATTAAT 1 cut(s) 900
XbaI TCTAGA 1 cut(s) 1403
XceI RCATGY 2 cut(s) 1307, 1620
XhoI CTCGAG 1 cut(s) 688
XmiI GTMKAC 2 cut(s) 382, 1346
XmnI GAANNNNTTC 2 cut(s) 225, 597
XspI CTAG 2 cut(s) 287, 1404
ZrmI AGTACT 2 cut(s) 127, 1478
Zsp2I ATGCAT 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.