Rw2G039410

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
64611845 .. 64614344
2500 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G039410.1

Sequence Viewer

Length: 2283 bp
ATGGAGGTCCAGTTGCTCCTACTTGAGATTACTCTCATGACCTTGTTGTTTTTGAGCTGTAGTGCAATACTTGGCGTAGCATCATCACCCTCGTTAGCAAAGCCTGGTTGTCAATCCCATTGTGGAGGCATAGAAATCCCATACCCTTTTGGGATTGGACCGAATTGTTACCTGCTGAAGAACGGCAGCCGTTGTTACCAAATATTCTGTGACTACTCGACCAACCCTCCCAAACCTTTCTTGAACCTTAACGACAGTCGACCGGAGGTTCTGGAGATATCTCTTGCGGGCACATTAAAAATAAAAAATCCTATCACCTTCTCCGATTGCCGTAACAAGCCAAACCACCGCCAGACACCCAACCTGTTGCCAACCCCTTTTTGGTTCTCCGATAGGAACAAGTTCACTTCAGTGAGTTGCGGGAGGATTGCATCGCTGATGTCCAAGTCATCAGCGATAATATGGGCTGTCTGTTTGTCCATTTGCGATTATCTCAGATCAGTAAATAATAGCTGCGGTGGTATCAACTGTTGTCAGACATCCCTTTCGTCACCCATTTTTTCAACCTTCAAAATTAGTTTTGGACCGTGGGCACTAAATGATGCCAGTGAAAGAACTTGTAAATATGCATTCCTGGTAGACCCAGAGTGGTTTACGTCTAATTCAACAAATATTTCTGCCATTGCTGAGATGGACGACGTCCCCATAGTGCTACATTGGATGATTACGGGAAAAATAGATAATTCTACCGAGGATGACGTGAACAGGAATTGCACATCTTCACGAGGTCCATGTTCCTGCTTAAAGGGCTATCAAGGAAACCCCTATTTGCGTGGTGGATGTCAAGATATCAATGAATGCGAGGATCAAAATCGCCCTAATATATGTGGTTTCGGCAAGATTTGTCACAATTTAGATGGGACCTTTGAATGCTACACCCCACCGCCCCCACAACCTCGGCCATTGCAGCCGATTAAACTGGCCATTATAAGTTATACGAAACAAATATTTGTTAGGTTCTTGATCAAGTTACTACATTATTCTAATTTTATTGAGCAATTCAGTTCCCTGCAGTGTCTTTGGGACTTTGGACTGTTGTTTCATATCATTGGCGCATGGTGGTTGCACAAAGTCATAAAGAAAAGGAAAAACATTAAGCGAAAGCAAAAGTTTTTTAGACTGAATGGAGGTTTGTTGTTGGAGCAACAGTTATCTTCTGGCGAAGTCAATGTTGAGAAGATTAAGCTGTTCAATGCCAAGGAGTTAGCGAAAGCCACAGACCGGTTTAATGTACACAGAGTTCTTGGTGAAGGAGGACAAGGTACTGTTTATAAAGGAATGTTGACAGATGGAAGAAATGTTGCTGTCAAGAAGTCAAAAGTAGTAGATGGAGGAGAAGTGAGTCAATTCATTAACGAGATTGTCATTCTTTCACAAATTAACCACAGGAATGTGGTTAAACTCTTGGGATGTTGTTTAGAGAGCGAAGTTCCCCTATTGGTCTATGAATTTTTGCCCAACGGAACCCTTTCTCAATACATTCACAGCCGCGATGAGGATTTCCCTCTAACTTGGGAAATGCGATTACGAGTTAGTACCGAAGTTGCTGGAGCCCTTTCCTACTTACATTCATCTGCTTCAATGCCCATTTACCATCGAGACATTAAGTCTTCAAACATACTCTTGGATGATAAATATAGAGCAAAAGTTGCAGACTTTGGGACATCAAGAACTGTTTCCATTGACAAAACACATCTTACCATGACACATGTAAACGGAACATTTGGTTATTTGGACCCTGAGTACTTCCAGTCTAGCCAATTTACAGACAAGAGCGACGTTTATAGCTTCGGAGTAGTCCTTGCCGAACTCTTGACTGGACAAAAACCAGTTTCTGTAACAAGATCGCAGGAAGGGAAACAAGATGGGAGAAGCCTAGCAACACATTTTATTGTGTCCATGGAGGAGGGTTGTTTGTTTGATATTCTTGATGCTGAAGTTATGAAGGGAGGTAAGAAAGAAGAGATAGTGGCGGTTGCTAATCTTGCAAAACGTTGCTTGAATATGAAAGGAAAGAAGCGTCCAACTATGAAAGAAATAGCAGTTGAGTTGGAGGGAATTCTAATGTCAAGTAAATCTTCTGATGTCGAACACATTGCAGAGGTTGAACATGTCCAGACGGAAATAGCCGAGGTTTGGGATGTTTCTACATCAACAGGCTCTCATATGGACACCGGTTCTTCATTCGATGTACAACCACTACTGTCTTTCAAGTCTCGCTGA

Protein Analysis

760

Amino Acids

84.86

Weight (kDa)

7.87

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 37 - 101 6.3e-09 Wall-associated receptor kinase galacturonan-binding
WAK PF08488 169 - 243 1.1e-06 Wall-associated kinase
Pkinase PF00069 429 - 700 1.1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 430 - 703 3.2e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 989, 1332
AatII GACGTC 1 cut(s) 702
Acc36I ACCTGC 1 cut(s) 180
AccI GTMKAC 2 cut(s) 259, 639
AccII CGCG 1 cut(s) 1551
AciI CCGC 7 cut(s) 287, 349, 420, 516, 944, 1549, 2033
AclI AACGTT 1 cut(s) 2053
AclWI GGATC 1 cut(s) 873
AcoI YGGCCR 2 cut(s) 959, 981
AcsI RAATTY 2 cut(s) 1508, 2118
AcuI CTGAAG 3 cut(s) 197, 393, 2016
AcyI GRCGYC 1 cut(s) 699
AfaI GTAC 5 cut(s) 1293, 1324, 1597, 1805, 2253
AfiI CCNNNNNNNGG 4 cut(s) 381, 1281, 1555, 2196
AflIII ACRYGT 2 cut(s) 1768, 2170
AgeI ACCGGT 2 cut(s) 1281, 2234
AhdI GACNNNNNGTC 1 cut(s) 1666
AjiI CACGTC 1 cut(s) 760
AjnI CCWGG 2 cut(s) 103, 633
AleI CACNNNNGTG 1 cut(s) 410
AluBI AGCT 4 cut(s) 57, 513, 1246, 1848
AluI AGCT 4 cut(s) 57, 513, 1246, 1848
Alw26I GTCTC 1 cut(s) 1653
AlwI GGATC 1 cut(s) 873
AlwNI CAGNNNCTG 1 cut(s) 1895
AoxI GGCC 2 cut(s) 959, 981
ApeKI GCWGC 3 cut(s) 186, 513, 967
ApoI RAATTY 2 cut(s) 1508, 2118
ArsI GACNNNNNNTTYG 2 cut(s) 529, 561
AsiGI ACCGGT 2 cut(s) 1281, 2234
Asp700I GAANNNNTTC 3 cut(s) 401, 1528, 1735
AspLEI GCGC 1 cut(s) 1115
AspS9I GGNCC 6 cut(s) 7, 158, 584, 788, 921, 1795
AsuHPI GGTGA 4 cut(s) 78, 307, 543, 1319
AvaII GGWCC 6 cut(s) 7, 158, 584, 788, 921, 1795
BaeGI GKGCMC 2 cut(s) 293, 595
BalI TGGCCA 1 cut(s) 983
BanII GRGCYC 1 cut(s) 1615
BauI CACGAG 1 cut(s) 783
BbsI GAAGAC 1 cut(s) 1662
BbvI GCAGC 3 cut(s) 198, 500, 979
BccI CCATC 6 cut(s) 685, 911, 1343, 1382, 1662, 1919
BceAI ACGGC 3 cut(s) 174, 199, 315
BcgI CGANNNNNNTGC 2 cut(s) 2138, 2172
BciT130I CCWGG 2 cut(s) 105, 635
BclI TGATCA 1 cut(s) 1023
BcoDI GTCTC 1 cut(s) 1653
BfaI CTAG 2 cut(s) 1815, 1937
BfmI CTRYAG 2 cut(s) 58, 1070
BfuAI ACCTGC 1 cut(s) 180
BisI GCNGC 4 cut(s) 187, 514, 968, 1549
BlsI GCNGC 4 cut(s) 188, 515, 969, 1550
BmcAI AGTACT 1 cut(s) 1805
Bme1390I CCNGG 2 cut(s) 105, 635
Bme18I GGWCC 6 cut(s) 7, 158, 584, 788, 921, 1795
BmeRI GACNNNNNGTC 1 cut(s) 1666
BmgBI CACGTC 1 cut(s) 760
BmgT120I GGNCC 6 cut(s) 7, 158, 584, 788, 921, 1795
BmiI GGNNCC 4 cut(s) 922, 1525, 1612, 1797
BmrFI CCNGG 2 cut(s) 105, 635
BmsI GCATC 4 cut(s) 89, 440, 592, 1981
BpiI GAAGAC 1 cut(s) 1662
BpmI CTGGAG 2 cut(s) 293, 1629
BpuEI CTTGAG 1 cut(s) 44
BsaBI GATNNNNATC 1 cut(s) 870
BsaHI GRCGYC 1 cut(s) 699
BsaJI CCNNGG 6 cut(s) 587, 750, 956, 1257, 1959, 2190
BsaWI WCCGGW 3 cut(s) 262, 1281, 2234
BsaXI ACNNNNNCTCC 7 cut(s) 26, 211, 241, 1193, 1223, 1383, 1413
Bsc4I CCNNNNNNNGG 4 cut(s) 381, 1281, 1555, 2196
Bse118I RCCGGY 2 cut(s) 1281, 2234
Bse1I ACTGG 6 cut(s) 10, 606, 984, 1810, 1882, 1889
Bse3DI GCAATG 3 cut(s) 681, 962, 2154
Bse8I GATNNNNATC 1 cut(s) 870
BseBI CCWGG 2 cut(s) 105, 635
BseDI CCNNGG 6 cut(s) 587, 750, 956, 1257, 1959, 2190
BseGI GGATG 7 cut(s) 539, 726, 760, 845, 1475, 1693, 2206
BseJI GATNNNNATC 1 cut(s) 870
BseLI CCNNNNNNNGG 4 cut(s) 381, 1281, 1555, 2196
BseMI GCAATG 3 cut(s) 681, 962, 2154
BseMII CTCAG 3 cut(s) 508, 678, 1791
BseNI ACTGG 6 cut(s) 10, 606, 984, 1810, 1882, 1889
BseRI GAGGAG 2 cut(s) 1407, 1979
BseSI GKGCMC 2 cut(s) 293, 595
BseXI GCAGC 3 cut(s) 198, 500, 979
Bsh1236I CGCG 1 cut(s) 1551
Bsh1285I CGRYCG 1 cut(s) 263
BshFI GGCC 2 cut(s) 961, 983
BshTI ACCGGT 2 cut(s) 1281, 2234
BsiEI CGRYCG 1 cut(s) 263
BsiSI CCGG 3 cut(s) 263, 1282, 2235
BslFI GGGAC 4 cut(s) 686, 934, 1097, 1735
BslI CCNNNNNNNGG 4 cut(s) 381, 1281, 1555, 2196
BsmAI GTCTC 1 cut(s) 1653
BsmFI GGGAC 4 cut(s) 686, 934, 1097, 1735
BsmI GAATGC 3 cut(s) 629, 863, 935
BsnI GGCC 2 cut(s) 961, 983
Bsp1286I GDGCHC 3 cut(s) 293, 595, 1615
Bsp1407I TGTACA 2 cut(s) 1291, 2251
Bsp143I GATC 4 cut(s) 497, 865, 1023, 1904
Bsp19I CCATGG 1 cut(s) 1959
BspACI CCGC 7 cut(s) 287, 349, 420, 516, 944, 1549, 2033
BspANI GGCC 2 cut(s) 961, 983
BspCNI CTCAG 3 cut(s) 507, 679, 1792
BspFNI CGCG 1 cut(s) 1551
BspHI TCATGA 1 cut(s) 36
BspLI GGNNCC 4 cut(s) 922, 1525, 1612, 1797
BspMAI CTGCAG 1 cut(s) 1074
BspMI ACCTGC 1 cut(s) 180
BspPI GGATC 1 cut(s) 873
BsrDI GCAATG 3 cut(s) 681, 962, 2154
BsrFI RCCGGY 2 cut(s) 1281, 2234
BsrGI TGTACA 2 cut(s) 1291, 2251
BsrI ACTGG 6 cut(s) 10, 606, 984, 1810, 1882, 1889
BssAI RCCGGY 2 cut(s) 1281, 2234
BssECI CCNNGG 6 cut(s) 587, 750, 956, 1257, 1959, 2190
BssMI GATC 4 cut(s) 497, 865, 1023, 1904
BssNI GRCGYC 1 cut(s) 699
BssSI CACGAG 1 cut(s) 783
BssT1I CCWWGG 2 cut(s) 1257, 1959
Bst2BI CACGAG 1 cut(s) 783
Bst2UI CCWGG 2 cut(s) 105, 635
Bst4CI ACNGT 8 cut(s) 257, 530, 588, 1095, 1209, 1327, 1735, 2265
Bst6I CTCTTC 1 cut(s) 2016
BstACI GRCGYC 1 cut(s) 699
BstAPI GCANNNNNTGC 1 cut(s) 1709
BstAUI TGTACA 2 cut(s) 1291, 2251
BstC8I GCNNGC 1 cut(s) 289
BstDEI CTNAG 3 cut(s) 494, 687, 1800
BstDSI CCRYGG 2 cut(s) 587, 1959
BstF5I GGATG 7 cut(s) 539, 726, 760, 845, 1475, 1693, 2206
BstFNI CGCG 1 cut(s) 1551
BstHHI GCGC 1 cut(s) 1115
BstKTI GATC 4 cut(s) 500, 868, 1026, 1907
BstMAI GTCTC 1 cut(s) 1653
BstMBI GATC 4 cut(s) 497, 865, 1023, 1904
BstMCI CGRYCG 1 cut(s) 263
BstMWI GCNNNNNNNGC 4 cut(s) 807, 967, 1709, 2045
BstNI CCWGG 2 cut(s) 105, 635
BstNSI RCATGY 2 cut(s) 1772, 2174
BstSCI CCNGG 2 cut(s) 103, 633
BstSFI CTRYAG 2 cut(s) 58, 1070
BstSLI GKGCMC 2 cut(s) 293, 595
BstUI CGCG 1 cut(s) 1551
BstV1I GCAGC 3 cut(s) 198, 500, 979
BstV2I GAAGAC 1 cut(s) 1662
BsuRI GGCC 2 cut(s) 961, 983
BtgI CCRYGG 2 cut(s) 587, 1959
BtgZI GCGATG 2 cut(s) 417, 1566
BtrI CACGTC 1 cut(s) 760
BtsCI GGATG 7 cut(s) 539, 726, 760, 845, 1475, 1693, 2206
BtsI GCAGTG 1 cut(s) 1079
BtsIMutI CAGTG 3 cut(s) 417, 613, 1079
BveI ACCTGC 1 cut(s) 180
Cac8I GCNNGC 1 cut(s) 289
CaiI CAGNNNCTG 1 cut(s) 1895
CciI TCATGA 1 cut(s) 36
CfoI GCGC 1 cut(s) 1115
Cfr10I RCCGGY 2 cut(s) 1281, 2234
Cfr13I GGNCC 6 cut(s) 7, 158, 584, 788, 921, 1795
CseI GACGC 1 cut(s) 2069
Csp6I GTAC 5 cut(s) 1292, 1323, 1596, 1804, 2252
CspAI ACCGGT 2 cut(s) 1281, 2234
CviAII CATG 7 cut(s) 37, 792, 1116, 1762, 1769, 1960, 2171
CviQI GTAC 5 cut(s) 1292, 1323, 1596, 1804, 2252
DdeI CTNAG 3 cut(s) 494, 687, 1800
DpnI GATC 4 cut(s) 499, 867, 1025, 1906
DpnII GATC 4 cut(s) 497, 865, 1023, 1904
DriI GACNNNNNGTC 1 cut(s) 1666
EaeI YGGCCR 2 cut(s) 959, 981
Eam1104I CTCTTC 1 cut(s) 2016
Eam1105I GACNNNNNGTC 1 cut(s) 1666
EarI CTCTTC 1 cut(s) 2016
Eco130I CCWWGG 2 cut(s) 1257, 1959
Eco24I GRGCYC 1 cut(s) 1615
Eco32I GATATC 2 cut(s) 279, 850
Eco47I GGWCC 6 cut(s) 7, 158, 584, 788, 921, 1795
Eco57I CTGAAG 3 cut(s) 197, 393, 2016
EcoO109I RGGNCCY 1 cut(s) 921
EcoRI GAATTC 1 cut(s) 2118
EcoRII CCWGG 2 cut(s) 103, 633
EcoRV GATATC 2 cut(s) 279, 850
EcoT14I CCWWGG 2 cut(s) 1257, 1959
EcoT22I ATGCAT 1 cut(s) 631
EcoT38I GRGCYC 1 cut(s) 1615
ErhI CCWWGG 2 cut(s) 1257, 1959
FaeI CATG 7 cut(s) 40, 795, 1119, 1765, 1772, 1963, 2174
FalI AAGNNNNNCTT 2 cut(s) 2122, 2154
FaqI GGGAC 4 cut(s) 686, 934, 1097, 1735
FatI CATG 7 cut(s) 36, 791, 1115, 1761, 1768, 1959, 2170
FauI CCCGC 2 cut(s) 280, 413
FauNDI CATATG 1 cut(s) 2226
FbaI TGATCA 1 cut(s) 1023
FblI GTMKAC 2 cut(s) 259, 639
Fnu4HI GCNGC 4 cut(s) 187, 514, 968, 1549
FokI GGATG 7 cut(s) 526, 733, 767, 852, 1482, 1700, 2213
FriOI GRGCYC 1 cut(s) 1615
Fsp4HI GCNGC 4 cut(s) 187, 514, 968, 1549
FspBI CTAG 2 cut(s) 1815, 1937
GlaI GCGC 1 cut(s) 1114
GluI GCNGC 4 cut(s) 187, 514, 968, 1549
GsuI CTGGAG 2 cut(s) 293, 1629
HaeIII GGCC 2 cut(s) 961, 983
HapII CCGG 3 cut(s) 263, 1282, 2235
HgaI GACGC 1 cut(s) 2069
HhaI GCGC 1 cut(s) 1115
Hin1I GRCGYC 1 cut(s) 699
Hin1II CATG 7 cut(s) 40, 795, 1119, 1765, 1772, 1963, 2174
Hin6I GCGC 1 cut(s) 1113
HinP1I GCGC 1 cut(s) 1113
HincII GTYRAC 2 cut(s) 260, 1344
HindII GTYRAC 2 cut(s) 260, 1344
HinfI GANTC 1 cut(s) 1402
HpaII CCGG 3 cut(s) 263, 1282, 2235
HphI GGTGA 4 cut(s) 78, 307, 543, 1319
Hpy166II GTNNAC 8 cut(s) 260, 405, 640, 654, 763, 1294, 1344, 1774
Hpy188I TCNGA 6 cut(s) 325, 391, 497, 537, 1853, 2143
Hpy8I GTNNAC 8 cut(s) 260, 405, 640, 654, 763, 1294, 1344, 1774
Hpy99I CGWCG 2 cut(s) 701, 1841
HpyAV CCTTC 5 cut(s) 328, 577, 1304, 1907, 1999
HpyCH4III ACNGT 8 cut(s) 257, 530, 588, 1095, 1209, 1327, 1735, 2265
HpyCH4IV ACGT 5 cut(s) 656, 699, 759, 1839, 2053
HpyF10VI GCNNNNNNNGC 4 cut(s) 807, 967, 1709, 2045
HpyF3I CTNAG 3 cut(s) 494, 687, 1800
HpySE526I ACGT 5 cut(s) 656, 699, 759, 1839, 2053
Hsp92I GRCGYC 1 cut(s) 699
Hsp92II CATG 7 cut(s) 40, 795, 1119, 1765, 1772, 1963, 2174
HspAI GCGC 1 cut(s) 1113
Ksp22I TGATCA 1 cut(s) 1023
Kzo9I GATC 4 cut(s) 497, 865, 1023, 1904
LmnI GCTCC 3 cut(s) 21, 1201, 1610
Lsp1109I GCAGC 3 cut(s) 198, 500, 979
LweI GCATC 4 cut(s) 89, 440, 592, 1981
MaeI CTAG 2 cut(s) 1815, 1937
MaeII ACGT 5 cut(s) 656, 699, 759, 1839, 2053
MaeIII GTNAC 8 cut(s) 167, 194, 209, 332, 549, 905, 1029, 1897
MalI GATC 4 cut(s) 499, 867, 1025, 1906
MboI GATC 4 cut(s) 497, 865, 1023, 1904
MboII GAAGA 9 cut(s) 190, 771, 1206, 1249, 1365, 1662, 2033, 2130, 2232
MhlI GDGCHC 3 cut(s) 293, 595, 1615
MlsI TGGCCA 1 cut(s) 983
MluNI TGGCCA 1 cut(s) 983
MlyI GAGTC 1 cut(s) 1411
MmeI TCCRAC 3 cut(s) 1179, 2091, 2108
Mox20I TGGCCA 1 cut(s) 983
Mph1103I ATGCAT 1 cut(s) 631
MroXI GAANNNNTTC 3 cut(s) 401, 1528, 1735
MscI TGGCCA 1 cut(s) 983
MslI CAYNNNNRTG 2 cut(s) 410, 1449
Msp20I TGGCCA 1 cut(s) 983
MspI CCGG 3 cut(s) 263, 1282, 2235
MspR9I CCNGG 2 cut(s) 105, 635
Mva1269I GAATGC 3 cut(s) 629, 863, 935
MvaI CCWGG 2 cut(s) 105, 635
MvnI CGCG 1 cut(s) 1551
MwoI GCNNNNNNNGC 4 cut(s) 807, 967, 1709, 2045
NcoI CCATGG 1 cut(s) 1959
NdeI CATATG 1 cut(s) 2226
NdeII GATC 4 cut(s) 497, 865, 1023, 1904
NlaIII CATG 7 cut(s) 40, 795, 1119, 1765, 1772, 1963, 2174
NlaIV GGNNCC 4 cut(s) 922, 1525, 1612, 1797
NmeAIII GCCGAG 2 cut(s) 937, 2215
NmuCI GTSAC 3 cut(s) 209, 549, 905
NsiI ATGCAT 1 cut(s) 631
NspI RCATGY 2 cut(s) 1772, 2174
OliI CACNNNNGTG 1 cut(s) 410
PagI TCATGA 1 cut(s) 36
PciI ACATGT 2 cut(s) 1768, 2170
PctI GAATGC 3 cut(s) 629, 863, 935
PdmI GAANNNNTTC 3 cut(s) 401, 1528, 1735
PflFI GACNNNGTC 1 cut(s) 698
PinAI ACCGGT 2 cut(s) 1281, 2234
PkrI GCNGC 4 cut(s) 188, 515, 969, 1550
PleI GAGTC 1 cut(s) 1410
PpsI GAGTC 1 cut(s) 1410
PpuMI RGGWCCY 1 cut(s) 921
PscI ACATGT 2 cut(s) 1768, 2170
PsiI TTATAA 2 cut(s) 989, 1332
Psp1406I AACGTT 1 cut(s) 2053
Psp5II RGGWCCY 1 cut(s) 921
Psp6I CCWGG 2 cut(s) 103, 633
PspGI CCWGG 2 cut(s) 103, 633
PspN4I GGNNCC 4 cut(s) 922, 1525, 1612, 1797
PspPI GGNCC 6 cut(s) 7, 158, 584, 788, 921, 1795
PspPPI RGGWCCY 1 cut(s) 921
PsrI GAACNNNNNNTAC 2 cut(s) 1284, 1316
PstI CTGCAG 1 cut(s) 1074
PstNI CAGNNNCTG 1 cut(s) 1895
PsyI GACNNNGTC 1 cut(s) 698
RsaI GTAC 5 cut(s) 1293, 1324, 1597, 1805, 2253
RsaNI GTAC 5 cut(s) 1292, 1323, 1596, 1804, 2252
RseI CAYNNNNRTG 2 cut(s) 410, 1449
SalI GTCGAC 1 cut(s) 258
SatI GCNGC 4 cut(s) 187, 514, 968, 1549
Sau3AI GATC 4 cut(s) 497, 865, 1023, 1904
Sau96I GGNCC 6 cut(s) 7, 158, 584, 788, 921, 1795
ScaI AGTACT 1 cut(s) 1805
SchI GAGTC 1 cut(s) 1411
ScrFI CCNGG 2 cut(s) 105, 635
SduI GDGCHC 3 cut(s) 293, 595, 1615
SfaNI GCATC 4 cut(s) 89, 440, 592, 1981
SfcI CTRYAG 2 cut(s) 58, 1070
SinI GGWCC 6 cut(s) 7, 158, 584, 788, 921, 1795
SmiMI CAYNNNNRTG 2 cut(s) 410, 1449
SmlI CTYRAG 1 cut(s) 23
SmoI CTYRAG 1 cut(s) 23
SsiI CCGC 7 cut(s) 287, 349, 420, 516, 944, 1549, 2033
SspI AATATT 3 cut(s) 204, 673, 1008
SspMI CTAG 2 cut(s) 1815, 1937
StyD4I CCNGG 2 cut(s) 103, 633
StyI CCWWGG 2 cut(s) 1257, 1959
TaaI ACNGT 8 cut(s) 257, 530, 588, 1095, 1209, 1327, 1735, 2265
TaiI ACGT 5 cut(s) 659, 702, 762, 1842, 2056
TaqI TCGA 5 cut(s) 218, 259, 1657, 2148, 2247
TaqII GACCGA 1 cut(s) 175
TatI WGTACW 3 cut(s) 1291, 1803, 2251
TauI GCSGC 1 cut(s) 1551
TscAI CASTG 3 cut(s) 417, 613, 1079
TseFI GTSAC 3 cut(s) 209, 549, 905
TseI GCWGC 3 cut(s) 186, 513, 967
Tsp45I GTSAC 3 cut(s) 209, 549, 905
TspDTI ATGAA 9 cut(s) 870, 1091, 1399, 1521, 1620, 2018, 2081, 2105, 2232
TspGWI ACGGA 3 cut(s) 1536, 1791, 2195
TspRI CASTG 3 cut(s) 417, 613, 1079
Tth111I GACNNNGTC 1 cut(s) 698
VpaK11BI GGWCC 6 cut(s) 7, 158, 584, 788, 921, 1795
XapI RAATTY 2 cut(s) 1508, 2118
XceI RCATGY 2 cut(s) 1772, 2174
XcmI CCANNNNNNNNNTGG 2 cut(s) 378, 688
XmiI GTMKAC 2 cut(s) 259, 639
XmnI GAANNNNTTC 3 cut(s) 401, 1528, 1735
XspI CTAG 2 cut(s) 1815, 1937
ZraI GACGTC 1 cut(s) 700
ZrmI AGTACT 1 cut(s) 1805
Zsp2I ATGCAT 1 cut(s) 631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.