Rorug02G0435300

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
55617071 .. 55619611
2541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0435300.1

Sequence Viewer

Length: 2541 bp
ATGCTCACTGTAATCTATGCAAGCCCTACCAATTCTGTTAGAGCTAATCTGTGGCCTTATCTTGATAATCTTATTGTTGATGTTAATCTTCCTAGCATGTTCATTGGTGATTTTAATGAGTTGATTTCCGTTAAGGACAAAAGTTGTGGCTCCCTTACTGGAAGATTTGGTGGATTAAGAGATTGGGTTAACAGGAATGCCTTGATTGATATGGGGTTCCAAGGGTCTTGTTTCACTTGGAGTAATAATAGAATTAAGGAGAGATTGGACAGAGGGTTCTGTAATTGCTCTTGGAGGTCTTCTTTTGCTGAGGCATTTATTCAACATCTTCCCAAGACTAGATCTGATCATTGCCCTATTTTGATGCAGCTCTATTCTAATAATTCTGTCAATAGAGAAGCTACTGCTTTTAGATTCCAGGCCATGTGGTTCTCCCATGCTAAGTACTTTGAATTTGTCTCTACTACTTGGAATGCACTAACTGGTGATTTCTCTAATAAAATTAAAGCTCTCTCTGTGGCCCTTGCTCAATGGAACAAAGATGTTTTTGGTCACTTGTTTCACAGGAAAAGGAAGCTCTTGGCTAGAATTGGGGGTATACGGAAGGCTAGGGATAGACATGAAAATCCTTTCTTAATTAATCTGGAAGCTGATCTTATTCAGGAATATGAGGCCATCAGAGATCAAGAGAATTTATTCTGGAGGCAGAAATCCAGGGACAATTGGCTGCAAGGTGGAGATCGAAATACCAGGTTCTTTCATCTAACTACTCTTGTTAGAAGAAGGAAAAATAAAATTGAGGGTTTATTTGATAAAGATGGGAACTGGTTTATTGATTCTACAAGCATGAAGAATATTTCTGTTGATTTTTTTGTTGACTTGTTCTCTCTTAAAAATGATGAGGATATTAGATTCACCATCCCTTGGCTTTTCCCTACTATTGATCAGATGACTTTAGACACCATAAGTAAGCCTATCACTTTGCTGGAGGTTAAAAACTTCTTATTTGCCATTGGTGGTCTCAAGGCTCCTGGCCATGATGGTTTTCCTGCCATTTTCTATCAGAATCATTGGCAAACATATTCTGGTGAAATTTTTAGAGTTGTTCATGAAGCCTTCAGATCCTGCAAAATTCCCCCAGGTTTGAATCACACTATCATTGCTCTTATTCCAAAAATTGATGGCCCCCAGCATATGGCCAATTTCAGACCCATCAGCTTGTGTACAACCATCTATAAGGTCATTTCTAAGATCATTGTTGCTAGAATCAGGCCTTTGATGCAGCACCTAATTAGCCCTAATCAGGTTAGTTATGTCTCGGGCAGGCATATTTCAGATAATATTATGATTGCTCAAGAAATGCTCTTCAAATTTAAAAGATCCTCTGGAAAGCTGGGATTTTTTGCTTGGAAATTTGACCTCTCTAAAGCTTATGATAGACTGAGATGGGATTTTATTGAGATGGTCCTATATGAAGCCCAATTTCCTCAGCCTCTTGTTAAGCTAATTATGCACTGTATTACATCAACTAGCTTTCAGATTTGTTTTAATGATGAGCTAACTGATTCTTTTGTAGCTCAACGAGGCATTAGACAAGGTGACCCCCTTTCTCCCTACATTTTTGTTCTTTGCATGGAGAAGCTCTCACACCTCATCCAATCTAATGTTGATATTGGGAGTTGGAAACCTGTTAGAGCATCTCAATCTGGCCCTAAGATCTCCCATCTGTTTTTTGCTGATGATTTAATGTTGTTTGCTGAGGCTTCTTCTCTTCAGGCTTGTAAACTCAAGAAATGTCTTGATCTGTTTTGCTCCTTGTCTGGCCAAGCTGTTAGCTATGAGAAGTCCCTTATCTACTGCTCCCCTAACACTTGCAAGAGAACTGCTGCTGAAATCAGTAGAATTTGTGGTTCTCCCTTGACCAATGATCTTGGTAAATACTTAGGCAAGCCCCTCATCCATTCCAGGGTCAATAAGCATACTTATGCTAGTATATTTGACAAGATTCAATGCAGGCTGTCTAGTTGGAAAAGTAAAGTCTTGAGCATGGCTGGCAGACTCACTCTGGTGCAATCTGTTACTTCTGCTATTCCTAACTATGCCATGCAGACTGCCAAGTTGCCTGTGAGTTTGTGTGATAAAATTGATAAACTAAATAGAGATTTCATTTGGGGTGACACTGATGAGAAAAAGAAAGTCCATTTAGTTAATTGGGATACTGTCTGTCAAACTAAGCAGTTGGGGGGCCTTGGTATTAAGAAAACTGCGGAGATGAATCAGGCTATGCTTGCTAAAGCCAGTTGGAGGATCTTTCAAAATGACACTGGTCTTTGGGCTTCTATGTATGCTGCTAAATATCTGCAGAATTCCAGTATTATTGATACAAGCTATAAACCCCCTCTTGACTGCTCCAGTACTTGGAGGAGTATCTCTCATGGTGCTGTTGTTTGGCTCCAATTTTGCTGCAGCTGGTCAACAGTCTCTTTTCTTGCGCGGGCGTGCCAGCACCATTCGAGTGCGGTCGTCGGGGGTGTCCCTTGA

Protein Analysis

846

Amino Acids

96.65

Weight (kDa)

9.33

Isoelectric Point (pI)

33.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 391 - 647 1.6e-28 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 924, 1195, 2418
AccI GTMKAC 1 cut(s) 598
AccII CGCG 1 cut(s) 2494
AciI CCGC 3 cut(s) 2267, 2494, 2519
AclWI GGATC 3 cut(s) 1116, 1374, 2315
AcoI YGGCCR 3 cut(s) 1033, 1197, 1822
AcsI RAATTY 8 cut(s) 452, 691, 1092, 1131, 1370, 1412, 1902, 2365
AcuI CTGAAG 2 cut(s) 1102, 1757
AfaI GTAC 3 cut(s) 446, 1225, 2416
AfiI CCNNNNNNNGG 6 cut(s) 924, 1195, 1303, 1966, 2304, 2418
AgsI TTSAA 6 cut(s) 323, 452, 1147, 1369, 2009, 2315
AjnI CCWGG 6 cut(s) 417, 713, 749, 1030, 1138, 1964
AleI CACNNNNGTG 1 cut(s) 2066
AloI GAACNNNNNNTCC 2 cut(s) 260, 292
Alw26I GTCTC 4 cut(s) 463, 1025, 1321, 2485
AlwI GGATC 3 cut(s) 1116, 1374, 2315
AlwNI CAGNNNCTG 1 cut(s) 1125
Ama87I CYCGRG 1 cut(s) 1318
ApeKI GCWGC 7 cut(s) 367, 727, 1282, 1886, 2348, 2463, 2466
ApoI RAATTY 8 cut(s) 452, 691, 1092, 1131, 1370, 1412, 1902, 2365
AseI ATTAAT 1 cut(s) 639
Asp700I GAANNNNTTC 1 cut(s) 695
AspLEI GCGC 1 cut(s) 2494
AspS9I GGNCC 5 cut(s) 520, 1184, 1465, 1709, 2245
AsuHPI GGTGA 6 cut(s) 119, 497, 907, 1100, 1610, 2186
AvaI CYCGRG 1 cut(s) 1318
AvaII GGWCC 1 cut(s) 1465
BalI TGGCCA 3 cut(s) 1035, 1199, 1824
BbsI GAAGAC 1 cut(s) 291
BbvCI CCTCAGC 3 cut(s) 309, 1488, 1758
BbvI GCAGC 7 cut(s) 379, 714, 1294, 1873, 2335, 2450, 2478
BciT130I CCWGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
BciVI GTATCC 1 cut(s) 2209
BclI TGATCA 2 cut(s) 346, 943
BcoDI GTCTC 4 cut(s) 463, 1025, 1321, 2485
BfaI CTAG 8 cut(s) 93, 339, 585, 609, 1263, 1530, 1989, 2022
BfmI CTRYAG 2 cut(s) 2360, 2464
BfuI GTATCC 1 cut(s) 2209
BglII AGATCT 2 cut(s) 341, 1716
BisI GCNGC 7 cut(s) 368, 728, 1283, 1887, 2349, 2464, 2467
BlsI GCNGC 7 cut(s) 369, 729, 1284, 1888, 2350, 2465, 2468
BmcAI AGTACT 2 cut(s) 446, 2416
Bme1390I CCNGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
Bme18I GGWCC 1 cut(s) 1465
BmeT110I CYCGRG 1 cut(s) 1318
BmgT120I GGNCC 5 cut(s) 520, 1184, 1465, 1709, 2245
BmiI GGNNCC 6 cut(s) 151, 218, 1029, 1186, 2246, 2453
BmrFI CCNGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
BmsI GCATC 3 cut(s) 354, 1269, 1706
BoxI GACNNNNGTC 1 cut(s) 2325
BpiI GAAGAC 1 cut(s) 291
BplI GAGNNNNNCTC 4 cut(s) 1628, 1660, 2416, 2448
BpmI CTGGAG 3 cut(s) 721, 1007, 2395
Bpu10I CCTNAGC 3 cut(s) 309, 1488, 1758
BpuEI CTTGAG 4 cut(s) 1007, 1338, 1772, 2062
BsaBI GATNNNNATC 1 cut(s) 84
BsaI GGTCTC 1 cut(s) 1025
BsaJI CCNNGG 6 cut(s) 220, 714, 923, 1138, 1965, 2248
Bsc4I CCNNNNNNNGG 6 cut(s) 924, 1195, 1303, 1966, 2304, 2418
Bse1I ACTGG 7 cut(s) 163, 487, 830, 2298, 2329, 2370, 2412
Bse3DI GCAATG 2 cut(s) 349, 1158
Bse8I GATNNNNATC 1 cut(s) 84
BseBI CCWGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
BseDI CCNNGG 6 cut(s) 220, 714, 923, 1138, 1965, 2248
BseGI GGATG 3 cut(s) 918, 1653, 1956
BseJI GATNNNNATC 1 cut(s) 84
BseLI CCNNNNNNNGG 6 cut(s) 924, 1195, 1303, 1966, 2304, 2418
BseMI GCAATG 2 cut(s) 349, 1158
BseMII CTCAG 4 cut(s) 300, 1433, 1502, 1749
BseNI ACTGG 7 cut(s) 163, 487, 830, 2298, 2329, 2370, 2412
BseRI GAGGAG 1 cut(s) 2437
BseXI GCAGC 7 cut(s) 379, 714, 1294, 1873, 2335, 2450, 2478
BseYI CCCAGC 2 cut(s) 1188, 1393
Bsh1236I CGCG 1 cut(s) 2494
Bsh1285I CGRYCG 1 cut(s) 2523
BsiEI CGRYCG 1 cut(s) 2523
BsiHKCI CYCGRG 1 cut(s) 1318
BslFI GGGAC 3 cut(s) 731, 1831, 2519
BslI CCNNNNNNNGG 6 cut(s) 924, 1195, 1303, 1966, 2304, 2418
BsmAI GTCTC 4 cut(s) 463, 1025, 1321, 2485
BsmFI GGGAC 3 cut(s) 731, 1831, 2519
BsmI GAATGC 2 cut(s) 202, 478
Bso31I GGTCTC 1 cut(s) 1025
BsoBI CYCGRG 1 cut(s) 1318
Bsp1407I TGTACA 1 cut(s) 1223
BspACI CCGC 3 cut(s) 2267, 2494, 2519
BspCNI CTCAG 4 cut(s) 301, 1434, 1501, 1750
BspFNI CGCG 1 cut(s) 2494
BspHI TCATGA 1 cut(s) 1108
BspLI GGNNCC 6 cut(s) 151, 218, 1029, 1186, 2246, 2453
BspMAI CTGCAG 2 cut(s) 2364, 2468
BspPI GGATC 3 cut(s) 1116, 1374, 2315
BspQI GCTCTTC 1 cut(s) 1370
BspTNI GGTCTC 1 cut(s) 1025
BsrDI GCAATG 2 cut(s) 349, 1158
BsrGI TGTACA 1 cut(s) 1223
BsrI ACTGG 7 cut(s) 163, 487, 830, 2298, 2329, 2370, 2412
BssECI CCNNGG 6 cut(s) 220, 714, 923, 1138, 1965, 2248
BssNAI GTATAC 1 cut(s) 599
BssT1I CCWWGG 3 cut(s) 220, 923, 2248
Bst1107I GTATAC 1 cut(s) 599
Bst2UI CCWGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
Bst4CI ACNGT 4 cut(s) 10, 1517, 2221, 2479
Bst6I CTCTTC 2 cut(s) 1370, 1776
BstAUI TGTACA 1 cut(s) 1223
BstC8I GCNNGC 9 cut(s) 22, 1325, 1949, 2015, 2053, 2289, 2496, 2500, 2504
BstDEI CTNAG 9 cut(s) 309, 441, 1248, 1442, 1488, 1713, 1758, 1942, 2232
BstEII GGTNACC 1 cut(s) 1598
BstF5I GGATG 3 cut(s) 918, 1653, 1956
BstFNI CGCG 1 cut(s) 2494
BstHHI GCGC 1 cut(s) 2494
BstMAI GTCTC 4 cut(s) 463, 1025, 1321, 2485
BstMCI CGRYCG 1 cut(s) 2523
BstMWI GCNNNNNNNGC 4 cut(s) 1279, 1510, 2052, 2288
BstNI CCWGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
BstNSI RCATGY 1 cut(s) 100
BstPAI GACNNNNGTC 1 cut(s) 2325
BstPI GGTNACC 1 cut(s) 1598
BstSCI CCNGG 6 cut(s) 417, 713, 749, 1030, 1138, 1964
BstSFI CTRYAG 2 cut(s) 2360, 2464
BstUI CGCG 1 cut(s) 2494
BstV1I GCAGC 7 cut(s) 379, 714, 1294, 1873, 2335, 2450, 2478
BstV2I GAAGAC 1 cut(s) 291
BstX2I RGATCY 5 cut(s) 341, 1121, 1379, 1716, 2307
BstYI RGATCY 5 cut(s) 341, 1121, 1379, 1716, 2307
BstZ17I GTATAC 1 cut(s) 599
BsuI GTATCC 1 cut(s) 2209
BtsCI GGATG 3 cut(s) 918, 1653, 1956
BtsIMutI CAGTG 4 cut(s) 6, 1513, 2178, 2322
Cac8I GCNNGC 9 cut(s) 22, 1325, 1949, 2015, 2053, 2289, 2496, 2500, 2504
CaiI CAGNNNCTG 1 cut(s) 1125
CciI TCATGA 1 cut(s) 1108
CfoI GCGC 1 cut(s) 2494
Cfr13I GGNCC 5 cut(s) 520, 1184, 1465, 1709, 2245
CsiI ACCWGGT 1 cut(s) 749
Csp6I GTAC 3 cut(s) 445, 1224, 2415
CspCI CAANNNNNGTGG 2 cut(s) 127, 162
CviQI GTAC 3 cut(s) 445, 1224, 2415
DdeI CTNAG 9 cut(s) 309, 441, 1248, 1442, 1488, 1713, 1758, 1942, 2232
DraI TTTAAA 1 cut(s) 1375
EaeI YGGCCR 3 cut(s) 1033, 1197, 1822
Eam1104I CTCTTC 2 cut(s) 1370, 1776
EarI CTCTTC 2 cut(s) 1370, 1776
Eco130I CCWWGG 3 cut(s) 220, 923, 2248
Eco147I AGGCCT 1 cut(s) 1273
Eco31I GGTCTC 1 cut(s) 1025
Eco47I GGWCC 1 cut(s) 1465
Eco57I CTGAAG 2 cut(s) 1102, 1757
Eco88I CYCGRG 1 cut(s) 1318
Eco91I GGTNACC 1 cut(s) 1598
EcoO109I RGGNCCY 1 cut(s) 2245
EcoO65I GGTNACC 1 cut(s) 1598
EcoRI GAATTC 1 cut(s) 2365
EcoRII CCWGG 6 cut(s) 417, 713, 749, 1030, 1138, 1964
EcoT14I CCWWGG 3 cut(s) 220, 923, 2248
ErhI CCWWGG 3 cut(s) 220, 923, 2248
FalI AAGNNNNNCTT 2 cut(s) 639, 671
FaqI GGGAC 3 cut(s) 731, 1831, 2519
FauI CCCGC 1 cut(s) 2487
FauNDI CATATG 1 cut(s) 1194
FbaI TGATCA 2 cut(s) 346, 943
FblI GTMKAC 1 cut(s) 598
Fnu4HI GCNGC 7 cut(s) 368, 728, 1283, 1887, 2349, 2464, 2467
FokI GGATG 3 cut(s) 905, 1640, 1943
Fsp4HI GCNGC 7 cut(s) 368, 728, 1283, 1887, 2349, 2464, 2467
FspBI CTAG 8 cut(s) 93, 339, 585, 609, 1263, 1530, 1989, 2022
GlaI GCGC 1 cut(s) 2493
GluI GCNGC 7 cut(s) 368, 728, 1283, 1887, 2349, 2464, 2467
GsaI CCCAGC 2 cut(s) 1192, 1397
GsuI CTGGAG 3 cut(s) 721, 1007, 2395
HhaI GCGC 1 cut(s) 2494
Hin6I GCGC 1 cut(s) 2492
HinP1I GCGC 1 cut(s) 2492
HincII GTYRAC 3 cut(s) 190, 877, 2475
HindII GTYRAC 3 cut(s) 190, 877, 2475
HindIII AAGCTT 1 cut(s) 1428
HpaI GTTAAC 1 cut(s) 190
HphI GGTGA 6 cut(s) 119, 497, 907, 1100, 1610, 2186
Hpy166II GTNNAC 6 cut(s) 190, 599, 877, 1224, 1784, 2475
Hpy188I TCNGA 8 cut(s) 346, 680, 948, 1065, 1121, 1208, 1336, 1539
Hpy8I GTNNAC 6 cut(s) 190, 599, 877, 1224, 1784, 2475
Hpy99I CGWCG 1 cut(s) 2528
HpyAV CCTTC 3 cut(s) 598, 777, 1126
HpyCH4III ACNGT 4 cut(s) 10, 1517, 2221, 2479
HpyF10VI GCNNNNNNNGC 4 cut(s) 1279, 1510, 2052, 2288
HpyF3I CTNAG 9 cut(s) 309, 441, 1248, 1442, 1488, 1713, 1758, 1942, 2232
HspAI GCGC 1 cut(s) 2492
Ksp22I TGATCA 2 cut(s) 346, 943
KspAI GTTAAC 1 cut(s) 190
LguI GCTCTTC 1 cut(s) 1370
LmnI GCTCC 6 cut(s) 155, 1033, 1817, 1865, 2414, 2457
Lsp1109I GCAGC 7 cut(s) 379, 714, 1294, 1873, 2335, 2450, 2478
LweI GCATC 3 cut(s) 354, 1269, 1706
MabI ACCWGGT 1 cut(s) 749
MaeI CTAG 8 cut(s) 93, 339, 585, 609, 1263, 1530, 1989, 2022
MaeIII GTNAC 4 cut(s) 551, 1598, 2077, 2174
MboII GAAGA 9 cut(s) 80, 174, 291, 320, 792, 862, 1357, 1758, 1763
MfeI CAATTG 1 cut(s) 721
MflI RGATCY 5 cut(s) 341, 1121, 1379, 1716, 2307
MlsI TGGCCA 3 cut(s) 1035, 1199, 1824
MluNI TGGCCA 3 cut(s) 1035, 1199, 1824
MlyI GAGTC 1 cut(s) 2052
MmeI TCCRAC 3 cut(s) 1661, 2006, 2282
Mox20I TGGCCA 3 cut(s) 1035, 1199, 1824
MroXI GAANNNNTTC 1 cut(s) 695
MscI TGGCCA 3 cut(s) 1035, 1199, 1824
MslI CAYNNNNRTG 3 cut(s) 1983, 2066, 2514
Msp20I TGGCCA 3 cut(s) 1035, 1199, 1824
MspA1I CMGCKG 1 cut(s) 2469
MspR9I CCNGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
MunI CAATTG 1 cut(s) 721
Mva1269I GAATGC 2 cut(s) 202, 478
MvaI CCWGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
MvnI CGCG 1 cut(s) 2494
MwoI GCNNNNNNNGC 4 cut(s) 1279, 1510, 2052, 2288
NdeI CATATG 1 cut(s) 1194
NlaIV GGNNCC 6 cut(s) 151, 218, 1029, 1186, 2246, 2453
NmuCI GTSAC 3 cut(s) 551, 1598, 2174
NspI RCATGY 1 cut(s) 100
OliI CACNNNNGTG 1 cut(s) 2066
PacI TTAATTAA 1 cut(s) 639
PagI TCATGA 1 cut(s) 1108
PceI AGGCCT 1 cut(s) 1273
PciSI GCTCTTC 1 cut(s) 1370
PctI GAATGC 2 cut(s) 202, 478
PdmI GAANNNNTTC 1 cut(s) 695
PfeI GAWTC 9 cut(s) 414, 836, 912, 1066, 1147, 1266, 1565, 2005, 2275
PflMI CCANNNNNTGG 3 cut(s) 924, 1195, 2418
PkrI GCNGC 7 cut(s) 369, 729, 1284, 1888, 2350, 2465, 2468
PleI GAGTC 1 cut(s) 2052
PpsI GAGTC 1 cut(s) 2052
PshAI GACNNNNGTC 1 cut(s) 2325
PshBI ATTAAT 1 cut(s) 639
Psp6I CCWGG 6 cut(s) 417, 713, 749, 1030, 1138, 1964
PspEI GGTNACC 1 cut(s) 1598
PspFI CCCAGC 2 cut(s) 1188, 1393
PspGI CCWGG 6 cut(s) 417, 713, 749, 1030, 1138, 1964
PspN4I GGNNCC 6 cut(s) 151, 218, 1029, 1186, 2246, 2453
PspPI GGNCC 5 cut(s) 520, 1184, 1465, 1709, 2245
PstI CTGCAG 2 cut(s) 2364, 2468
PstNI CAGNNNCTG 1 cut(s) 1125
PsuI RGATCY 5 cut(s) 341, 1121, 1379, 1716, 2307
PvuII CAGCTG 1 cut(s) 2469
RsaI GTAC 3 cut(s) 446, 1225, 2416
RsaNI GTAC 3 cut(s) 445, 1224, 2415
RseI CAYNNNNRTG 3 cut(s) 1983, 2066, 2514
SapI GCTCTTC 1 cut(s) 1370
SatI GCNGC 7 cut(s) 368, 728, 1283, 1887, 2349, 2464, 2467
Sau96I GGNCC 5 cut(s) 520, 1184, 1465, 1709, 2245
ScaI AGTACT 2 cut(s) 446, 2416
SchI GAGTC 1 cut(s) 2052
ScrFI CCNGG 6 cut(s) 419, 715, 751, 1032, 1140, 1966
SexAI ACCWGGT 1 cut(s) 749
SfaNI GCATC 3 cut(s) 354, 1269, 1706
SfcI CTRYAG 2 cut(s) 2360, 2464
SinI GGWCC 1 cut(s) 1465
SmiMI CAYNNNNRTG 3 cut(s) 1983, 2066, 2514
SmlI CTYRAG 4 cut(s) 1022, 1353, 1787, 2041
SmoI CTYRAG 4 cut(s) 1022, 1353, 1787, 2041
SseBI AGGCCT 1 cut(s) 1273
SsiI CCGC 3 cut(s) 2267, 2494, 2519
SspI AATATT 2 cut(s) 856, 1342
SspMI CTAG 8 cut(s) 93, 339, 585, 609, 1263, 1530, 1989, 2022
StuI AGGCCT 1 cut(s) 1273
StyD4I CCNGG 6 cut(s) 417, 713, 749, 1030, 1138, 1964
StyI CCWWGG 3 cut(s) 220, 923, 2248
TaaI ACNGT 4 cut(s) 10, 1517, 2221, 2479
TaqI TCGA 2 cut(s) 742, 2513
TatI WGTACW 3 cut(s) 444, 1223, 2414
TfiI GAWTC 9 cut(s) 414, 836, 912, 1066, 1147, 1266, 1565, 2005, 2275
TscAI CASTG 4 cut(s) 13, 1520, 2185, 2329
TseFI GTSAC 3 cut(s) 551, 1598, 2174
TseI GCWGC 7 cut(s) 367, 727, 1282, 1886, 2348, 2463, 2466
Tsp45I GTSAC 3 cut(s) 551, 1598, 2174
TspDTI ATGAA 9 cut(s) 91, 636, 749, 863, 1097, 1125, 1488, 2155, 2288
TspGWI ACGGA 2 cut(s) 118, 616
TspRI CASTG 4 cut(s) 13, 1520, 2185, 2329
Van91I CCANNNNNTGG 3 cut(s) 924, 1195, 2418
VpaK11BI GGWCC 1 cut(s) 1465
VspI ATTAAT 1 cut(s) 639
XapI RAATTY 8 cut(s) 452, 691, 1092, 1131, 1370, 1412, 1902, 2365
XceI RCATGY 1 cut(s) 100
XmiI GTMKAC 1 cut(s) 598
XmnI GAANNNNTTC 1 cut(s) 695
XspI CTAG 8 cut(s) 93, 339, 585, 609, 1263, 1530, 1989, 2022
ZrmI AGTACT 2 cut(s) 446, 2416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.