RLG00000002941

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
42056375 .. 42064927
8553 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002941

Sequence Viewer

Length: 2340 bp
ATGCTAGTGCTAGTTCAACATATCATATTTATAGTACTTCTATGGGGCATAAATAGTAGAGCTGCATCAGCAGAGTTAGCTCCACCGGTAGCAAAGCCGAATTGCACAGCGCGCTGTGGAGATGTGAGCATCCCATACCCTTTCGGAATTGGATCGAATAGAGATTGTTACTTTGATGAATGGTTTCAAATAGACTGCCACAATTCTACAACCCCTATTTTGAGGCGCTCCAAACTAGAGGTGCTGAATATTTCCACTGATGATGGGCTGAATATTTCCCCTTCTGTGTTGAATATTTCCGCTGATCCATTTACGCTTCGGGTTAAGAACCCTGTCACTTTCTTCAACTGCAAGGGAAAGGAAGTTCGACAAGCGGCAAACTTGACAGGAAGCCCTTTCGTTTACTCTCCGGAAAGAAATAAGTTCATTGCGGTGAGCTGTGGCTTCCTTGCCTCCGTGAGCACGGATCATGAGAACGTCATTGGTGCCTGCTCATCAATTTGTGTAGACAATTCGGACCGAGACTATGAGGGCTGCGATATTGGTATCAACTGTTGCCGGACTACTATTCCTCCTTATCTGACGGTTATCAACAGTAGCATACAAGCACTTGAGGATGCTGTTGATGCAGTGACCGAAGGATCACGAACGCCCGATTGCAACGACTATGCTTTCCTGGTAGACCAAGAGTGGTTTGACAAAGATATAAAAAAATTTACGGCTGTAAAGAAAATGGACAGCGTTCCTGTTGTTCTGGAATGGAGCTTAAGCTTAGACAGCAATAAGTCGCTGAACAAAACATTTGAGGGATTCATTTTTTCCAATCAAAATCGAAGTATTTTCAAGAATGACTCAAGACCCTTTTGCGAATTTTTGAATGCCACTAATTTGCCGAACAATACTGGGTTGAAGGTTGAGTGTTGGTGTCCAATGGGCTTTGAAGGAAATCCATTTCTGCTCCAACCTTGTCGAGATATTGACGAATGCAAGTTCCTCAAGCAGTGTATTCCCGACTCTCCATTATGGAGCAATGCGTGGAATATTAGTAACGCTACATGTGAGAACATTCCTGGGGGTCATATATGCTCCAATTCAACAGGCGCTACGTGTGAGTTGATGGCCGTCGGTATTGGTTCGGGCCCTGGAGTATTGTTACTAGTTATAGGTGCGTGGTCGGCACACAAAGCAGTAAAGAAAAGGAAAGATATCAAGCGCAAGGAAATGTTTTTCAAACAAAATGGTGGATTGTTGTTAGAACAACAAATATCGTCCGGGAAAGTTAACGTTGAGAAAATCAAGTTGTTTAACTCAAGTGAGTTAGAGAAGTCGACAGACAATTTTAACATTGATAGAGTTCTAGGTCAGGGAGGACAAGGTATTGTTTTCAAAGGCATGCTAGCAGATGGAACAATCGTTGCGGTGAAAAAGTCGAAAATAGACGATAAAGGAAAAGTTTCAGAGTTCATAAATGAGGTTGTCATTCTTTCACAAATCAACCATAGGAATATTGTTCAACTATTGGGTTGTTGTCTAGAGACTGAAGTTCCCCTTTTGGTATATGAATTTATACCTAACGGAACTCTCTCCCAGTATATTTATGAGCAAAATGAGGAGTTCCCACTTACATGGGAAATGCGCTTACGAATTGCAACCGAAATTGCAGGAGCTCTATCCTATTTGCATACGGCAGCTTCATGTCCCATTTACCATAGAGATATCAAGTCCACGAACATACTCTTAGATGAGAAATATAGAGCGAAAATCGCTGATTTTGGAACTTCAAGATCGGTTGCTATTGATCAAACTCACCTGACCACGAATGTTCATGGCACATTTGGTTACTTGGATCCTGAATACTTCCAATCAAGTCAATTTACGGAGAAAAGTGATGTATACAGTTTTGGAGTGGTTCTTGTTGAGCTCTTGACTGGACAAAAACCAATTTCTGCTGTAACAAGATCCATAGAAGAAGAAGAAGAAGAAGAAAAAGAATACAAAAGCCTTGCAACACATTTCATTGTTTCGATGCAGGAAGATCGCCTATTCAACATTCTTGATGCCCGAGTTGTGAAGGAAGGTTCTAAAGAAGATATTGTGACAGTTACTAACTTGGCAAGACGATGCTTGAATTTGAATGGAAGAAATCGCCCAACAATGAGAGAGGTCACAGCCGTGTTGGAAGCTATCCAAATCTCAAACACGACTCCTCAGGGGACAGAATTCATTCCCGAACATAACCCAACTGAGCACTGGGAGGACGTCGTTTCAAGCTCAACCGGATCAACTTGGGATAGTGGTCCGGCTTCATCATTACTTGAACCTCCACAATCATTTATGTAG

Protein Analysis

780

Amino Acids

86.58

Weight (kDa)

5.17

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 88 1.5e-12 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 448 - 723 3.8e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 448 - 724 1.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2262
AccB1I GGYRCC 1 cut(s) 485
AccI GTMKAC 4 cut(s) 507, 681, 1328, 1893
AccII CGCG 1 cut(s) 112
AccIII TCCGGA 1 cut(s) 409
AciI CCGC 4 cut(s) 300, 374, 431, 1418
AclI AACGTT 1 cut(s) 1284
AclWI GGATC 8 cut(s) 160, 299, 474, 649, 1841, 1854, 1953, 2287
AcoI YGGCCR 1 cut(s) 1119
AcsI RAATTY 5 cut(s) 713, 869, 1562, 2128, 2219
AcuI CTGAAG 1 cut(s) 1560
AcyI GRCGYC 1 cut(s) 2259
AfaI GTAC 1 cut(s) 36
AflII CTTAAG 1 cut(s) 766
AflIII ACRYGT 2 cut(s) 1055, 1106
AgeI ACCGGT 1 cut(s) 85
AhlI ACTAGT 1 cut(s) 1156
AjnI CCWGG 3 cut(s) 675, 1069, 1141
AleI CACNNNNGTG 1 cut(s) 2171
AloI GAACNNNNNNTCC 2 cut(s) 348, 380
Alw21I GWGCWC 4 cut(s) 464, 1669, 1923, 2250
Alw26I GTCTC 2 cut(s) 516, 1529
AlwI GGATC 8 cut(s) 160, 299, 474, 649, 1841, 1854, 1953, 2287
Ama87I CYCGRG 1 cut(s) 2061
Aor13HI TCCGGA 1 cut(s) 409
AoxI GGCC 2 cut(s) 1119, 1138
ApaI GGGCCC 1 cut(s) 1142
ApeKI GCWGC 3 cut(s) 62, 534, 1688
ApoI RAATTY 5 cut(s) 713, 869, 1562, 2128, 2219
AsiGI ACCGGT 1 cut(s) 85
Asp700I GAANNNNTTC 3 cut(s) 183, 1453, 2223
AspLEI GCGC 6 cut(s) 112, 114, 228, 1103, 1215, 1638
AspS9I GGNCC 4 cut(s) 517, 1138, 1139, 2297
AsuC2I CCSGG 1 cut(s) 1273
AsuHPI GGTGA 3 cut(s) 445, 1432, 1799
AsuNHI GCTAGC 1 cut(s) 1396
AvaI CYCGRG 1 cut(s) 2061
AvaII GGWCC 2 cut(s) 517, 2297
AxyI CCTNAGG 1 cut(s) 2208
BaeGI GKGCMC 1 cut(s) 1142
BamHI GGATCC 1 cut(s) 1846
BanI GGYRCC 1 cut(s) 485
BanII GRGCYC 3 cut(s) 1142, 1669, 1923
Bbv12I GWGCWC 4 cut(s) 464, 1669, 1923, 2250
BbvI GCAGC 3 cut(s) 49, 521, 1700
BccI CCATC 3 cut(s) 257, 1111, 1397
BceAI ACGGC 4 cut(s) 735, 1106, 1701, 2156
BcgI CGANNNNNNTGC 2 cut(s) 2018, 2052
BciT130I CCWGG 3 cut(s) 677, 1071, 1143
BclI TGATCA 1 cut(s) 1798
BcnI CCSGG 1 cut(s) 1273
BcoDI GTCTC 2 cut(s) 516, 1529
BcuI ACTAGT 1 cut(s) 1156
BfaI CTAG 7 cut(s) 5, 11, 236, 1157, 1358, 1397, 1532
BfoI RGCGCY 2 cut(s) 229, 1104
BfrI CTTAAG 1 cut(s) 766
BisI GCNGC 4 cut(s) 63, 375, 535, 1689
BlsI GCNGC 4 cut(s) 64, 376, 536, 1690
BmcAI AGTACT 1 cut(s) 36
Bme1390I CCNGG 4 cut(s) 677, 1071, 1143, 1273
Bme18I GGWCC 2 cut(s) 517, 2297
BmeT110I CYCGRG 1 cut(s) 2061
BmgT120I GGNCC 4 cut(s) 517, 1138, 1139, 2297
BmiI GGNNCC 3 cut(s) 487, 1140, 1848
BmrFI CCNGG 4 cut(s) 677, 1071, 1143, 1273
BmrI ACTGGG 3 cut(s) 912, 1582, 2260
BmsI GCATC 7 cut(s) 74, 138, 607, 616, 2016, 2047, 2111
BmtI GCTAGC 1 cut(s) 1400
BmuI ACTGGG 3 cut(s) 912, 1582, 2260
BpmI CTGGAG 1 cut(s) 1164
BpuEI CTTGAG 4 cut(s) 632, 838, 980, 1294
BpuMI CCSGG 1 cut(s) 1273
BsaAI YACGTR 1 cut(s) 1107
BsaHI GRCGYC 1 cut(s) 2259
BsaJI CCNNGG 2 cut(s) 1070, 1141
BsaWI WCCGGW 3 cut(s) 85, 409, 2276
BsaXI ACNNNNNCTCC 2 cut(s) 556, 586
Bse118I RCCGGY 1 cut(s) 85
Bse1I ACTGG 4 cut(s) 907, 1588, 1933, 2255
Bse21I CCTNAGG 1 cut(s) 2208
Bse3DI GCAATG 2 cut(s) 426, 1036
BseAI TCCGGA 1 cut(s) 409
BseBI CCWGG 3 cut(s) 677, 1071, 1143
BseDI CCNNGG 2 cut(s) 1070, 1141
BseGI GGATG 2 cut(s) 129, 622
BseMI GCAATG 2 cut(s) 426, 1036
BseMII CTCAG 2 cut(s) 2222, 2235
BseNI ACTGG 4 cut(s) 907, 1588, 1933, 2255
BsePI GCGCGC 1 cut(s) 110
BseRI GAGGAG 2 cut(s) 1625, 2196
BseSI GKGCMC 1 cut(s) 1142
BseXI GCAGC 3 cut(s) 49, 521, 1700
Bsh1236I CGCG 1 cut(s) 112
BshFI GGCC 2 cut(s) 1121, 1140
BshNI GGYRCC 1 cut(s) 485
BshTI ACCGGT 1 cut(s) 85
BsiHKAI GWGCWC 4 cut(s) 464, 1669, 1923, 2250
BsiHKCI CYCGRG 1 cut(s) 2061
BsiSI CCGG 6 cut(s) 86, 410, 559, 1272, 2277, 2300
BslFI GGGAC 2 cut(s) 1683, 2227
BsmAI GTCTC 2 cut(s) 516, 1529
BsmFI GGGAC 2 cut(s) 1683, 2227
BsmI GAATGC 2 cut(s) 883, 989
BsnI GGCC 2 cut(s) 1121, 1140
BsoBI CYCGRG 1 cut(s) 2061
Bsp120I GGGCCC 1 cut(s) 1138
Bsp1286I GDGCHC 5 cut(s) 464, 1142, 1669, 1923, 2250
Bsp13I TCCGGA 1 cut(s) 409
BspACI CCGC 4 cut(s) 300, 374, 431, 1418
BspANI GGCC 2 cut(s) 1121, 1140
BspCNI CTCAG 2 cut(s) 2221, 2236
BspEI TCCGGA 1 cut(s) 409
BspFNI CGCG 1 cut(s) 112
BspHI TCATGA 1 cut(s) 469
BspLI GGNNCC 3 cut(s) 487, 1140, 1848
BspOI GCTAGC 1 cut(s) 1400
BspPI GGATC 8 cut(s) 160, 299, 474, 649, 1841, 1854, 1953, 2287
BspT107I GGYRCC 1 cut(s) 485
BspTI CTTAAG 1 cut(s) 766
BsrDI GCAATG 2 cut(s) 426, 1036
BsrFI RCCGGY 1 cut(s) 85
BsrI ACTGG 4 cut(s) 907, 1588, 1933, 2255
BssAI RCCGGY 1 cut(s) 85
BssECI CCNNGG 2 cut(s) 1070, 1141
BssHII GCGCGC 1 cut(s) 110
BssNAI GTATAC 1 cut(s) 1894
BssNI GRCGYC 1 cut(s) 2259
Bst1107I GTATAC 1 cut(s) 1894
Bst2UI CCWGG 3 cut(s) 677, 1071, 1143
Bst4CI ACNGT 5 cut(s) 554, 586, 596, 1898, 2101
BstACI GRCGYC 1 cut(s) 2259
BstAFI CTTAAG 1 cut(s) 766
BstBAI YACGTR 1 cut(s) 1107
BstC8I GCNNGC 4 cut(s) 112, 490, 1394, 1398
BstDEI CTNAG 4 cut(s) 772, 1738, 2208, 2244
BstF5I GGATG 2 cut(s) 129, 622
BstFNI CGCG 1 cut(s) 112
BstH2I RGCGCY 2 cut(s) 229, 1104
BstHHI GCGC 6 cut(s) 112, 114, 228, 1103, 1215, 1638
BstMAI GTCTC 2 cut(s) 516, 1529
BstMWI GCNNNNNNNGC 8 cut(s) 68, 77, 111, 626, 777, 1175, 1184, 1763
BstNI CCWGG 3 cut(s) 677, 1071, 1143
BstNSI RCATGY 2 cut(s) 1059, 1396
BstSCI CCNGG 4 cut(s) 675, 1069, 1141, 1271
BstSLI GKGCMC 1 cut(s) 1142
BstUI CGCG 1 cut(s) 112
BstV1I GCAGC 3 cut(s) 49, 521, 1700
BstX2I RGATCY 2 cut(s) 1846, 1958
BstXI CCANNNNNNTGG 1 cut(s) 1626
BstYI RGATCY 2 cut(s) 1846, 1958
BstZ17I GTATAC 1 cut(s) 1894
Bsu36I CCTNAGG 1 cut(s) 2208
BsuRI GGCC 2 cut(s) 1121, 1140
BtsCI GGATG 2 cut(s) 129, 622
BtsI GCAGTG 2 cut(s) 636, 1007
BtsIMutI CAGTG 4 cut(s) 255, 636, 1007, 2248
Cac8I GCNNGC 4 cut(s) 112, 490, 1394, 1398
CciI TCATGA 1 cut(s) 469
CfoI GCGC 6 cut(s) 112, 114, 228, 1103, 1215, 1638
Cfr10I RCCGGY 1 cut(s) 85
Cfr13I GGNCC 4 cut(s) 517, 1138, 1139, 2297
CpoI CGGWCCG 1 cut(s) 517
Csp6I GTAC 1 cut(s) 35
CspAI ACCGGT 1 cut(s) 85
CspI CGGWCCG 1 cut(s) 517
CviAII CATG 6 cut(s) 470, 1056, 1393, 1626, 1695, 1826
CviQI GTAC 1 cut(s) 35
DdeI CTNAG 4 cut(s) 772, 1738, 2208, 2244
EaeI YGGCCR 1 cut(s) 1119
Ecl136II GAGCTC 2 cut(s) 1667, 1921
Eco24I GRGCYC 3 cut(s) 1142, 1669, 1923
Eco32I GATATC 2 cut(s) 1207, 1717
Eco47I GGWCC 2 cut(s) 517, 2297
Eco53kI GAGCTC 2 cut(s) 1667, 1921
Eco57I CTGAAG 1 cut(s) 1560
Eco81I CCTNAGG 1 cut(s) 2208
Eco88I CYCGRG 1 cut(s) 2061
EcoICRI GAGCTC 2 cut(s) 1667, 1921
EcoO109I RGGNCCY 1 cut(s) 1139
EcoRI GAATTC 1 cut(s) 2219
EcoRII CCWGG 3 cut(s) 675, 1069, 1141
EcoRV GATATC 2 cut(s) 1207, 1717
EcoT38I GRGCYC 3 cut(s) 1142, 1669, 1923
FaeI CATG 6 cut(s) 473, 1059, 1396, 1629, 1698, 1829
FalI AAGNNNNNCTT 2 cut(s) 1533, 1565
FaqI GGGAC 2 cut(s) 1683, 2227
FatI CATG 6 cut(s) 469, 1055, 1392, 1625, 1694, 1825
FbaI TGATCA 1 cut(s) 1798
FblI GTMKAC 4 cut(s) 507, 681, 1328, 1893
Fnu4HI GCNGC 4 cut(s) 63, 375, 535, 1689
FokI GGATG 2 cut(s) 116, 629
FriOI GRGCYC 3 cut(s) 1142, 1669, 1923
Fsp4HI GCNGC 4 cut(s) 63, 375, 535, 1689
FspBI CTAG 7 cut(s) 5, 11, 236, 1157, 1358, 1397, 1532
GlaI GCGC 6 cut(s) 111, 113, 227, 1102, 1214, 1637
GluI GCNGC 4 cut(s) 63, 375, 535, 1689
GsuI CTGGAG 1 cut(s) 1164
HaeII RGCGCY 2 cut(s) 229, 1104
HaeIII GGCC 2 cut(s) 1121, 1140
HapII CCGG 6 cut(s) 86, 410, 559, 1272, 2277, 2300
HhaI GCGC 6 cut(s) 112, 114, 228, 1103, 1215, 1638
Hin1I GRCGYC 1 cut(s) 2259
Hin1II CATG 6 cut(s) 473, 1059, 1396, 1629, 1698, 1829
Hin6I GCGC 6 cut(s) 110, 112, 226, 1101, 1213, 1636
HinP1I GCGC 6 cut(s) 110, 112, 226, 1101, 1213, 1636
HincII GTYRAC 2 cut(s) 1282, 1329
HindII GTYRAC 2 cut(s) 1282, 1329
HindIII AAGCTT 1 cut(s) 769
HinfI GANTC 4 cut(s) 810, 851, 1013, 2203
HpaI GTTAAC 1 cut(s) 1282
HpaII CCGG 6 cut(s) 86, 410, 559, 1272, 2277, 2300
HphI GGTGA 3 cut(s) 445, 1432, 1799
Hpy166II GTNNAC 7 cut(s) 403, 508, 682, 1282, 1329, 1725, 1894
Hpy188I TCNGA 4 cut(s) 146, 517, 582, 1459
Hpy8I GTNNAC 7 cut(s) 403, 508, 682, 1282, 1329, 1725, 1894
Hpy99I CGWCG 2 cut(s) 1127, 2264
HpyAV CCTTC 6 cut(s) 291, 632, 904, 935, 2065, 2069
HpyCH4III ACNGT 5 cut(s) 554, 586, 596, 1898, 2101
HpyCH4IV ACGT 4 cut(s) 477, 1106, 1284, 2259
HpyF10VI GCNNNNNNNGC 8 cut(s) 68, 77, 111, 626, 777, 1175, 1184, 1763
HpyF3I CTNAG 4 cut(s) 772, 1738, 2208, 2244
HpySE526I ACGT 4 cut(s) 477, 1106, 1284, 2259
Hsp92I GRCGYC 1 cut(s) 2259
Hsp92II CATG 6 cut(s) 473, 1059, 1396, 1629, 1698, 1829
HspAI GCGC 6 cut(s) 110, 112, 226, 1101, 1213, 1636
Kpn2I TCCGGA 1 cut(s) 409
Ksp22I TGATCA 1 cut(s) 1798
KspAI GTTAAC 1 cut(s) 1282
LmnI GCTCC 7 cut(s) 85, 233, 762, 963, 1026, 1091, 1664
Lsp1109I GCAGC 3 cut(s) 49, 521, 1700
LweI GCATC 7 cut(s) 74, 138, 607, 616, 2016, 2047, 2111
MaeI CTAG 7 cut(s) 5, 11, 236, 1157, 1358, 1397, 1532
MaeII ACGT 4 cut(s) 477, 1106, 1284, 2259
MflI RGATCY 2 cut(s) 1846, 1958
MhlI GDGCHC 5 cut(s) 464, 1142, 1669, 1923, 2250
MlyI GAGTC 3 cut(s) 845, 1007, 2197
MmeI TCCRAC 2 cut(s) 985, 2157
MroI TCCGGA 1 cut(s) 409
MroXI GAANNNNTTC 3 cut(s) 183, 1453, 2223
MseI TTAA 5 cut(s) 324, 767, 1281, 1305, 1341
MslI CAYNNNNRTG 3 cut(s) 431, 1624, 2171
MspA1I CMGCKG 1 cut(s) 302
MspCI CTTAAG 1 cut(s) 766
MspI CCGG 6 cut(s) 86, 410, 559, 1272, 2277, 2300
MspR9I CCNGG 4 cut(s) 677, 1071, 1143, 1273
Mva1269I GAATGC 2 cut(s) 883, 989
MvaI CCWGG 3 cut(s) 677, 1071, 1143
MvnI CGCG 1 cut(s) 112
MwoI GCNNNNNNNGC 8 cut(s) 68, 77, 111, 626, 777, 1175, 1184, 1763
NciI CCSGG 1 cut(s) 1273
NheI GCTAGC 1 cut(s) 1396
NlaIII CATG 6 cut(s) 473, 1059, 1396, 1629, 1698, 1829
NlaIV GGNNCC 3 cut(s) 487, 1140, 1848
NmuCI GTSAC 4 cut(s) 334, 631, 2095, 2164
NspI RCATGY 2 cut(s) 1059, 1396
OliI CACNNNNGTG 1 cut(s) 2171
PaeI GCATGC 1 cut(s) 1396
PagI TCATGA 1 cut(s) 469
PauI GCGCGC 1 cut(s) 110
PciI ACATGT 1 cut(s) 1055
PctI GAATGC 2 cut(s) 883, 989
PdmI GAANNNNTTC 3 cut(s) 183, 1453, 2223
PfeI GAWTC 1 cut(s) 810
PfoI TCCNGGA 1 cut(s) 1271
PinAI ACCGGT 1 cut(s) 85
PkrI GCNGC 4 cut(s) 64, 376, 536, 1690
PleI GAGTC 3 cut(s) 845, 1007, 2197
PpsI GAGTC 3 cut(s) 845, 1007, 2197
Ppu21I YACGTR 1 cut(s) 1107
PscI ACATGT 1 cut(s) 1055
Psp124BI GAGCTC 2 cut(s) 1669, 1923
Psp1406I AACGTT 1 cut(s) 1284
Psp6I CCWGG 3 cut(s) 675, 1069, 1141
PspGI CCWGG 3 cut(s) 675, 1069, 1141
PspN4I GGNNCC 3 cut(s) 487, 1140, 1848
PspOMI GGGCCC 1 cut(s) 1138
PspPI GGNCC 4 cut(s) 517, 1138, 1139, 2297
PsuI RGATCY 2 cut(s) 1846, 1958
PteI GCGCGC 1 cut(s) 110
RsaI GTAC 1 cut(s) 36
RsaNI GTAC 1 cut(s) 35
RseI CAYNNNNRTG 3 cut(s) 431, 1624, 2171
Rsr2I CGGWCCG 1 cut(s) 517
RsrII CGGWCCG 1 cut(s) 517
SacI GAGCTC 2 cut(s) 1669, 1923
SalI GTCGAC 1 cut(s) 1327
SaqAI TTAA 5 cut(s) 324, 767, 1281, 1305, 1341
SatI GCNGC 4 cut(s) 63, 375, 535, 1689
Sau96I GGNCC 4 cut(s) 517, 1138, 1139, 2297
ScaI AGTACT 1 cut(s) 36
SchI GAGTC 3 cut(s) 845, 1007, 2197
ScrFI CCNGG 4 cut(s) 677, 1071, 1143, 1273
SduI GDGCHC 5 cut(s) 464, 1142, 1669, 1923, 2250
SfaNI GCATC 7 cut(s) 74, 138, 607, 616, 2016, 2047, 2111
SinI GGWCC 2 cut(s) 517, 2297
SmiMI CAYNNNNRTG 3 cut(s) 431, 1624, 2171
SmlI CTYRAG 5 cut(s) 611, 766, 853, 995, 1309
SmoI CTYRAG 5 cut(s) 611, 766, 853, 995, 1309
SpeI ACTAGT 1 cut(s) 1156
SphI GCATGC 1 cut(s) 1396
SsiI CCGC 4 cut(s) 300, 374, 431, 1418
SspI AATATT 5 cut(s) 250, 274, 295, 1042, 1507
SspMI CTAG 7 cut(s) 5, 11, 236, 1157, 1358, 1397, 1532
SstI GAGCTC 2 cut(s) 1669, 1923
StyD4I CCNGG 4 cut(s) 675, 1069, 1141, 1271
TaaI ACNGT 5 cut(s) 554, 586, 596, 1898, 2101
TaiI ACGT 4 cut(s) 480, 1109, 1287, 2262
TaqI TCGA 7 cut(s) 155, 367, 832, 970, 1328, 1430, 2024
TaqII GACCGA 2 cut(s) 534, 650
TatI WGTACW 1 cut(s) 34
TauI GCSGC 1 cut(s) 377
TfiI GAWTC 1 cut(s) 810
Tru1I TTAA 5 cut(s) 324, 767, 1281, 1305, 1341
Tru9I TTAA 5 cut(s) 324, 767, 1281, 1305, 1341
TscAI CASTG 4 cut(s) 262, 636, 1007, 2255
TseFI GTSAC 4 cut(s) 334, 631, 2095, 2164
TseI GCWGC 3 cut(s) 62, 534, 1688
Tsp45I GTSAC 4 cut(s) 334, 631, 2095, 2164
TspGWI ACGGA 4 cut(s) 445, 479, 1590, 1892
TspRI CASTG 4 cut(s) 262, 636, 1007, 2255
Vha464I CTTAAG 1 cut(s) 766
VpaK11BI GGWCC 2 cut(s) 517, 2297
XapI RAATTY 5 cut(s) 713, 869, 1562, 2128, 2219
XbaI TCTAGA 1 cut(s) 1531
XceI RCATGY 2 cut(s) 1059, 1396
XcmI CCANNNNNNNNNTGG 1 cut(s) 2247
XmiI GTMKAC 4 cut(s) 507, 681, 1328, 1893
XmnI GAANNNNTTC 3 cut(s) 183, 1453, 2223
XspI CTAG 7 cut(s) 5, 11, 236, 1157, 1358, 1397, 1532
ZraI GACGTC 1 cut(s) 2260
ZrmI AGTACT 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.