wall-associated receptor kinase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GUB_WAK_bind | PF13947 | 34 - 99 | 6.2e-12 | Wall-associated receptor kinase galacturonan-binding |
| EGF_CA | PF07645 | 309 - 337 | 6.3e-07 | Calcium-binding EGF domain |
| Pkinase | PF00069 | 420 - 687 | 1.4e-47 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 423 - 690 | 7.5e-47 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 244 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 452 |
| Acc36I | ACCTGC | 1 cut(s) | 244 |
| AccI | GTMKAC | 1 cut(s) | 1302 |
| AccIII | TCCGGA | 1 cut(s) | 1771 |
| AciI | CCGC | 5 cut(s) | 109, 114, 280, 1003, 1053 |
| AclI | AACGTT | 1 cut(s) | 2014 |
| AclWI | GGATC | 2 cut(s) | 1763, 1776 |
| AcoI | YGGCCR | 2 cut(s) | 405, 423 |
| AcsI | RAATTY | 4 cut(s) | 675, 1272, 2023, 2079 |
| AcyI | GRCGYC | 2 cut(s) | 1877, 2041 |
| AfaI | GTAC | 7 cut(s) | 511, 538, 1554, 1746, 1778, 2215, 2229 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 427, 570, 905, 964 |
| AgsI | TTSAA | 8 cut(s) | 149, 275, 992, 1647, 1784, 2029, 2084, 2180 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1639 |
| AhlI | ACTAGT | 2 cut(s) | 335, 533 |
| AjnI | CCWGG | 3 cut(s) | 318, 420, 1656 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 666, 698, 1356, 1388 |
| Alw21I | GWGCWC | 2 cut(s) | 860, 1845 |
| Alw26I | GTCTC | 4 cut(s) | 212, 485, 1448, 2032 |
| AlwI | GGATC | 2 cut(s) | 1763, 1776 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 259 |
| Ama87I | CYCGRG | 2 cut(s) | 236, 1913 |
| Aor13HI | TCCGGA | 1 cut(s) | 1771 |
| AoxI | GGCC | 3 cut(s) | 405, 423, 762 |
| ApeKI | GCWGC | 4 cut(s) | 111, 471, 707, 873 |
| ApoI | RAATTY | 4 cut(s) | 675, 1272, 2023, 2079 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 176, 208, 966, 998 |
| AseI | ATTAAT | 1 cut(s) | 1386 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1501 |
| AspA2I | CCTAGG | 1 cut(s) | 187 |
| AspS9I | GGNCC | 3 cut(s) | 762, 1347, 1924 |
| AsuC2I | CCSGG | 1 cut(s) | 361 |
| AsuHPI | GGTGA | 2 cut(s) | 335, 497 |
| AvaI | CYCGRG | 2 cut(s) | 236, 1913 |
| AvaII | GGWCC | 2 cut(s) | 1347, 1924 |
| AvrII | CCTAGG | 1 cut(s) | 187 |
| BamHI | GGATCC | 1 cut(s) | 1768 |
| BanII | GRGCYC | 1 cut(s) | 1845 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1542, 1574 |
| BauI | CACGAG | 1 cut(s) | 1891 |
| BbsI | GAAGAC | 2 cut(s) | 282, 1635 |
| Bbv12I | GWGCWC | 2 cut(s) | 860, 1845 |
| BbvI | GCAGC | 4 cut(s) | 98, 483, 694, 860 |
| BccI | CCATC | 5 cut(s) | 320, 1316, 1628, 1635, 1964 |
| BceAI | ACGGC | 2 cut(s) | 410, 1169 |
| BciT130I | CCWGG | 3 cut(s) | 320, 422, 1658 |
| BclI | TGATCA | 1 cut(s) | 1954 |
| BcnI | CCSGG | 1 cut(s) | 361 |
| BcoDI | GTCTC | 4 cut(s) | 212, 485, 1448, 2032 |
| BcuI | ACTAGT | 2 cut(s) | 335, 533 |
| BfaI | CTAG | 7 cut(s) | 188, 336, 534, 755, 822, 1040, 1788 |
| BfmI | CTRYAG | 3 cut(s) | 222, 708, 851 |
| BfuAI | ACCTGC | 1 cut(s) | 244 |
| BglII | AGATCT | 1 cut(s) | 2189 |
| BisI | GCNGC | 5 cut(s) | 112, 472, 708, 874, 1053 |
| BlnI | CCTAGG | 1 cut(s) | 187 |
| BlpI | GCTNAGC | 1 cut(s) | 1839 |
| BlsI | GCNGC | 5 cut(s) | 113, 473, 709, 875, 1054 |
| BmcAI | AGTACT | 1 cut(s) | 1778 |
| Bme1390I | CCNGG | 4 cut(s) | 320, 361, 422, 1658 |
| Bme18I | GGWCC | 2 cut(s) | 1347, 1924 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1639 |
| BmeT110I | CYCGRG | 2 cut(s) | 236, 1913 |
| BmgT120I | GGNCC | 3 cut(s) | 762, 1347, 1924 |
| BmiI | GGNNCC | 3 cut(s) | 744, 911, 1770 |
| BmrFI | CCNGG | 4 cut(s) | 320, 361, 422, 1658 |
| BmsI | GCATC | 3 cut(s) | 33, 98, 1528 |
| BpiI | GAAGAC | 2 cut(s) | 282, 1635 |
| BpmI | CTGGAG | 3 cut(s) | 627, 1602, 2093 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1839 |
| BpuEI | CTTGAG | 1 cut(s) | 1118 |
| BpuMI | CCSGG | 1 cut(s) | 361 |
| BsaAI | YACGTR | 1 cut(s) | 1545 |
| BsaBI | GATNNNNATC | 1 cut(s) | 447 |
| BsaHI | GRCGYC | 2 cut(s) | 1877, 2041 |
| BsaI | GGTCTC | 1 cut(s) | 1448 |
| BsaJI | CCNNGG | 5 cut(s) | 187, 319, 426, 460, 1920 |
| BsaWI | WCCGGW | 2 cut(s) | 1771, 1850 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1111, 1141 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 427, 570, 905, 964 |
| Bse1I | ACTGG | 4 cut(s) | 408, 452, 636, 1792 |
| Bse3DI | GCAATG | 1 cut(s) | 958 |
| Bse8I | GATNNNNATC | 1 cut(s) | 447 |
| BseAI | TCCGGA | 1 cut(s) | 1771 |
| BseBI | CCWGG | 3 cut(s) | 320, 422, 1658 |
| BseDI | CCNNGG | 5 cut(s) | 187, 319, 426, 460, 1920 |
| BseGI | GGATG | 5 cut(s) | 89, 152, 158, 456, 2173 |
| BseJI | GATNNNNATC | 1 cut(s) | 447 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 427, 570, 905, 964 |
| BseMI | GCAATG | 1 cut(s) | 958 |
| BseMII | CTCAG | 3 cut(s) | 395, 489, 1830 |
| BseNI | ACTGG | 4 cut(s) | 408, 452, 636, 1792 |
| BseRI | GAGGAG | 2 cut(s) | 752, 1544 |
| BseXI | GCAGC | 4 cut(s) | 98, 483, 694, 860 |
| BsgI | GTGCAG | 2 cut(s) | 272, 490 |
| BshFI | GGCC | 3 cut(s) | 407, 425, 764 |
| BsiHKAI | GWGCWC | 2 cut(s) | 860, 1845 |
| BsiHKCI | CYCGRG | 2 cut(s) | 236, 1913 |
| BsiSI | CCGG | 3 cut(s) | 360, 1772, 1851 |
| BslFI | GGGAC | 2 cut(s) | 376, 1309 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 427, 570, 905, 964 |
| BsmAI | GTCTC | 4 cut(s) | 212, 485, 1448, 2032 |
| BsmBI | CGTCTC | 2 cut(s) | 485, 2032 |
| BsmFI | GGGAC | 2 cut(s) | 376, 1309 |
| BsmI | GAATGC | 1 cut(s) | 941 |
| BsnI | GGCC | 3 cut(s) | 407, 425, 764 |
| Bso31I | GGTCTC | 1 cut(s) | 1448 |
| BsoBI | CYCGRG | 2 cut(s) | 236, 1913 |
| Bsp1286I | GDGCHC | 2 cut(s) | 860, 1845 |
| Bsp13I | TCCGGA | 1 cut(s) | 1771 |
| Bsp1407I | TGTACA | 1 cut(s) | 2227 |
| Bsp143I | GATC | 4 cut(s) | 1703, 1768, 1954, 2189 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1839 |
| Bsp19I | CCATGG | 1 cut(s) | 1920 |
| BspACI | CCGC | 5 cut(s) | 109, 114, 280, 1003, 1053 |
| BspANI | GGCC | 3 cut(s) | 407, 425, 764 |
| BspCNI | CTCAG | 3 cut(s) | 394, 488, 1831 |
| BspEI | TCCGGA | 1 cut(s) | 1771 |
| BspLI | GGNNCC | 3 cut(s) | 744, 911, 1770 |
| BspMAI | CTGCAG | 3 cut(s) | 226, 712, 855 |
| BspMI | ACCTGC | 1 cut(s) | 244 |
| BspPI | GGATC | 2 cut(s) | 1763, 1776 |
| BspTNI | GGTCTC | 1 cut(s) | 1448 |
| BsrDI | GCAATG | 1 cut(s) | 958 |
| BsrGI | TGTACA | 1 cut(s) | 2227 |
| BsrI | ACTGG | 4 cut(s) | 408, 452, 636, 1792 |
| BssECI | CCNNGG | 5 cut(s) | 187, 319, 426, 460, 1920 |
| BssMI | GATC | 4 cut(s) | 1703, 1768, 1954, 2189 |
| BssNI | GRCGYC | 2 cut(s) | 1877, 2041 |
| BssSI | CACGAG | 1 cut(s) | 1891 |
| BssT1I | CCWWGG | 3 cut(s) | 187, 460, 1920 |
| Bst2BI | CACGAG | 1 cut(s) | 1891 |
| Bst2UI | CCWGG | 3 cut(s) | 320, 422, 1658 |
| Bst4CI | ACNGT | 9 cut(s) | 55, 545, 786, 947, 1069, 1127, 1262, 1300, 1664 |
| Bst6I | CTCTTC | 2 cut(s) | 569, 709 |
| BstACI | GRCGYC | 2 cut(s) | 1877, 2041 |
| BstAUI | TGTACA | 1 cut(s) | 2227 |
| BstBAI | YACGTR | 1 cut(s) | 1545 |
| BstC8I | GCNNGC | 2 cut(s) | 883, 970 |
| BstDEI | CTNAG | 6 cut(s) | 11, 181, 381, 475, 1026, 1839 |
| BstDSI | CCRYGG | 2 cut(s) | 426, 1920 |
| BstF5I | GGATG | 5 cut(s) | 89, 152, 158, 456, 2173 |
| BstKTI | GATC | 4 cut(s) | 1706, 1771, 1957, 2192 |
| BstMAI | GTCTC | 4 cut(s) | 212, 485, 1448, 2032 |
| BstMBI | GATC | 4 cut(s) | 1703, 1768, 1954, 2189 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 108, 882, 969, 1682, 2006 |
| BstNI | CCWGG | 3 cut(s) | 320, 422, 1658 |
| BstNSI | RCATGY | 1 cut(s) | 659 |
| BstSCI | CCNGG | 4 cut(s) | 318, 359, 420, 1656 |
| BstSFI | CTRYAG | 3 cut(s) | 222, 708, 851 |
| BstV1I | GCAGC | 4 cut(s) | 98, 483, 694, 860 |
| BstV2I | GAAGAC | 2 cut(s) | 282, 1635 |
| BstX2I | RGATCY | 2 cut(s) | 1768, 2189 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 326 |
| BstYI | RGATCY | 2 cut(s) | 1768, 2189 |
| BsuRI | GGCC | 3 cut(s) | 407, 425, 764 |
| BtgI | CCRYGG | 2 cut(s) | 426, 1920 |
| BtsCI | GGATG | 5 cut(s) | 89, 152, 158, 456, 2173 |
| BtsI | GCAGTG | 3 cut(s) | 231, 600, 2070 |
| BtsIMutI | CAGTG | 3 cut(s) | 231, 600, 2070 |
| BveI | ACCTGC | 1 cut(s) | 244 |
| Cac8I | GCNNGC | 2 cut(s) | 883, 970 |
| CaiI | CAGNNNCTG | 1 cut(s) | 259 |
| Cfr13I | GGNCC | 3 cut(s) | 762, 1347, 1924 |
| CseI | GACGC | 2 cut(s) | 1885, 2049 |
| Csp6I | GTAC | 7 cut(s) | 510, 537, 1553, 1745, 1777, 2214, 2228 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1879, 1914 |
| CviAII | CATG | 4 cut(s) | 28, 656, 1735, 1921 |
| CviQI | GTAC | 7 cut(s) | 510, 537, 1553, 1745, 1777, 2214, 2228 |
| DdeI | CTNAG | 6 cut(s) | 11, 181, 381, 475, 1026, 1839 |
| DpnI | GATC | 4 cut(s) | 1705, 1770, 1956, 2191 |
| DpnII | GATC | 4 cut(s) | 1703, 1768, 1954, 2189 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 452 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1639 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 452 |
| EaeI | YGGCCR | 2 cut(s) | 405, 423 |
| Eam1104I | CTCTTC | 2 cut(s) | 569, 709 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1639 |
| EarI | CTCTTC | 2 cut(s) | 569, 709 |
| Ecl136II | GAGCTC | 1 cut(s) | 1843 |
| Eco130I | CCWWGG | 3 cut(s) | 187, 460, 1920 |
| Eco24I | GRGCYC | 1 cut(s) | 1845 |
| Eco31I | GGTCTC | 1 cut(s) | 1448 |
| Eco47I | GGWCC | 2 cut(s) | 1347, 1924 |
| Eco53kI | GAGCTC | 1 cut(s) | 1843 |
| Eco88I | CYCGRG | 2 cut(s) | 236, 1913 |
| EcoICRI | GAGCTC | 1 cut(s) | 1843 |
| EcoRI | GAATTC | 2 cut(s) | 1272, 2079 |
| EcoRII | CCWGG | 3 cut(s) | 318, 420, 1656 |
| EcoT14I | CCWWGG | 3 cut(s) | 187, 460, 1920 |
| EcoT22I | ATGCAT | 1 cut(s) | 661 |
| EcoT38I | GRGCYC | 1 cut(s) | 1845 |
| ErhI | CCWWGG | 3 cut(s) | 187, 460, 1920 |
| Esp3I | CGTCTC | 2 cut(s) | 485, 2032 |
| FaeI | CATG | 4 cut(s) | 31, 659, 1738, 1924 |
| FaqI | GGGAC | 2 cut(s) | 376, 1309 |
| FatI | CATG | 4 cut(s) | 27, 655, 1734, 1920 |
| FauNDI | CATATG | 1 cut(s) | 18 |
| FbaI | TGATCA | 1 cut(s) | 1954 |
| FblI | GTMKAC | 1 cut(s) | 1302 |
| Fnu4HI | GCNGC | 5 cut(s) | 112, 472, 708, 874, 1053 |
| FokI | GGATG | 5 cut(s) | 76, 139, 145, 443, 2180 |
| FriOI | GRGCYC | 1 cut(s) | 1845 |
| Fsp4HI | GCNGC | 5 cut(s) | 112, 472, 708, 874, 1053 |
| FspBI | CTAG | 7 cut(s) | 188, 336, 534, 755, 822, 1040, 1788 |
| GluI | GCNGC | 5 cut(s) | 112, 472, 708, 874, 1053 |
| GsuI | CTGGAG | 3 cut(s) | 627, 1602, 2093 |
| HaeIII | GGCC | 3 cut(s) | 407, 425, 764 |
| HapII | CCGG | 3 cut(s) | 360, 1772, 1851 |
| HgaI | GACGC | 2 cut(s) | 1885, 2049 |
| Hin1I | GRCGYC | 2 cut(s) | 1877, 2041 |
| Hin1II | CATG | 4 cut(s) | 31, 659, 1738, 1924 |
| HincII | GTYRAC | 3 cut(s) | 295, 670, 985 |
| HindII | GTYRAC | 3 cut(s) | 295, 670, 985 |
| HindIII | AAGCTT | 1 cut(s) | 2160 |
| HpaI | GTTAAC | 1 cut(s) | 295 |
| HpaII | CCGG | 3 cut(s) | 360, 1772, 1851 |
| HphI | GGTGA | 2 cut(s) | 335, 497 |
| Hpy166II | GTNNAC | 9 cut(s) | 295, 641, 670, 985, 1248, 1303, 1797, 1966, 2113 |
| Hpy188I | TCNGA | 9 cut(s) | 143, 384, 442, 687, 925, 1694, 1872, 1942, 2125 |
| Hpy188III | TCNNGA | 7 cut(s) | 66, 1265, 1631, 1701, 1772, 1846, 1949 |
| Hpy8I | GTNNAC | 9 cut(s) | 295, 641, 670, 985, 1248, 1303, 1797, 1966, 2113 |
| HpyAV | CCTTC | 6 cut(s) | 721, 826, 884, 986, 1358, 2028 |
| HpyCH4III | ACNGT | 9 cut(s) | 55, 545, 786, 947, 1069, 1127, 1262, 1300, 1664 |
| HpyCH4IV | ACGT | 3 cut(s) | 1544, 1812, 2014 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 108, 882, 969, 1682, 2006 |
| HpyF3I | CTNAG | 6 cut(s) | 11, 181, 381, 475, 1026, 1839 |
| HpySE526I | ACGT | 3 cut(s) | 1544, 1812, 2014 |
| Hsp92I | GRCGYC | 2 cut(s) | 1877, 2041 |
| Hsp92II | CATG | 4 cut(s) | 31, 659, 1738, 1924 |
| Kpn2I | TCCGGA | 1 cut(s) | 1771 |
| Ksp22I | TGATCA | 1 cut(s) | 1954 |
| KspAI | GTTAAC | 1 cut(s) | 295 |
| Kzo9I | GATC | 4 cut(s) | 1703, 1768, 1954, 2189 |
| LmnI | GCTCC | 7 cut(s) | 68, 167, 629, 909, 996, 1583, 2068 |
| Lsp1109I | GCAGC | 4 cut(s) | 98, 483, 694, 860 |
| LweI | GCATC | 3 cut(s) | 33, 98, 1528 |
| MaeI | CTAG | 7 cut(s) | 188, 336, 534, 755, 822, 1040, 1788 |
| MaeII | ACGT | 3 cut(s) | 1544, 1812, 2014 |
| MaeIII | GTNAC | 6 cut(s) | 485, 515, 1097, 1121, 1631, 1808 |
| MalI | GATC | 4 cut(s) | 1705, 1770, 1956, 2191 |
| MboI | GATC | 4 cut(s) | 1703, 1768, 1954, 2189 |
| MboII | GAAGA | 6 cut(s) | 287, 586, 726, 1338, 1635, 1994 |
| MfeI | CAATTG | 3 cut(s) | 5, 1181, 2084 |
| MflI | RGATCY | 2 cut(s) | 1768, 2189 |
| MhlI | GDGCHC | 2 cut(s) | 860, 1845 |
| MlyI | GAGTC | 6 cut(s) | 446, 490, 726, 1235, 1903, 1925 |
| MmeI | TCCRAC | 5 cut(s) | 1066, 1152, 1354, 1374, 2165 |
| Mph1103I | ATGCAT | 1 cut(s) | 661 |
| MroI | TCCGGA | 1 cut(s) | 1771 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1501 |
| MseI | TTAA | 9 cut(s) | 294, 789, 1200, 1215, 1386, 1431, 1638, 2021, 2202 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1422, 1524 |
| MspA1I | CMGCKG | 3 cut(s) | 111, 707, 1005 |
| MspI | CCGG | 3 cut(s) | 360, 1772, 1851 |
| MspR9I | CCNGG | 4 cut(s) | 320, 361, 422, 1658 |
| MunI | CAATTG | 3 cut(s) | 5, 1181, 2084 |
| Mva1269I | GAATGC | 1 cut(s) | 941 |
| MvaI | CCWGG | 3 cut(s) | 320, 422, 1658 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 108, 882, 969, 1682, 2006 |
| NciI | CCSGG | 1 cut(s) | 361 |
| NcoI | CCATGG | 1 cut(s) | 1920 |
| NdeI | CATATG | 1 cut(s) | 18 |
| NdeII | GATC | 4 cut(s) | 1703, 1768, 1954, 2189 |
| NlaIII | CATG | 4 cut(s) | 31, 659, 1738, 1924 |
| NlaIV | GGNNCC | 3 cut(s) | 744, 911, 1770 |
| NmeAIII | GCCGAG | 2 cut(s) | 857, 944 |
| NmuCI | GTSAC | 4 cut(s) | 485, 1121, 1631, 1808 |
| NsiI | ATGCAT | 1 cut(s) | 661 |
| NspI | RCATGY | 1 cut(s) | 659 |
| PaeR7I | CTCGAG | 2 cut(s) | 236, 1913 |
| PaqCI | CACCTGC | 1 cut(s) | 244 |
| PctI | GAATGC | 1 cut(s) | 941 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1501 |
| PfeI | GAWTC | 8 cut(s) | 127, 149, 286, 773, 794, 815, 1329, 2180 |
| PfoI | TCCNGGA | 2 cut(s) | 359, 1656 |
| PkrI | GCNGC | 5 cut(s) | 113, 473, 709, 875, 1054 |
| PleI | GAGTC | 6 cut(s) | 445, 490, 725, 1234, 1902, 1924 |
| PpsI | GAGTC | 6 cut(s) | 445, 490, 725, 1234, 1902, 1924 |
| Ppu21I | YACGTR | 1 cut(s) | 1545 |
| PshBI | ATTAAT | 1 cut(s) | 1386 |
| Psp124BI | GAGCTC | 1 cut(s) | 1845 |
| Psp1406I | AACGTT | 1 cut(s) | 2014 |
| Psp6I | CCWGG | 3 cut(s) | 318, 420, 1656 |
| PspGI | CCWGG | 3 cut(s) | 318, 420, 1656 |
| PspN4I | GGNNCC | 3 cut(s) | 744, 911, 1770 |
| PspPI | GGNCC | 3 cut(s) | 762, 1347, 1924 |
| PspXI | VCTCGAGB | 2 cut(s) | 236, 1913 |
| PstI | CTGCAG | 3 cut(s) | 226, 712, 855 |
| PstNI | CAGNNNCTG | 1 cut(s) | 259 |
| PsuI | RGATCY | 2 cut(s) | 1768, 2189 |
| PvuII | CAGCTG | 1 cut(s) | 707 |
| RsaI | GTAC | 7 cut(s) | 511, 538, 1554, 1746, 1778, 2215, 2229 |
| RsaNI | GTAC | 7 cut(s) | 510, 537, 1553, 1745, 1777, 2214, 2228 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1422, 1524 |
| SacI | GAGCTC | 1 cut(s) | 1845 |
| SaqAI | TTAA | 9 cut(s) | 294, 789, 1200, 1215, 1386, 1431, 1638, 2021, 2202 |
| SatI | GCNGC | 5 cut(s) | 112, 472, 708, 874, 1053 |
| Sau3AI | GATC | 4 cut(s) | 1703, 1768, 1954, 2189 |
| Sau96I | GGNCC | 3 cut(s) | 762, 1347, 1924 |
| ScaI | AGTACT | 1 cut(s) | 1778 |
| SchI | GAGTC | 6 cut(s) | 446, 490, 726, 1235, 1903, 1925 |
| ScrFI | CCNGG | 4 cut(s) | 320, 361, 422, 1658 |
| SduI | GDGCHC | 2 cut(s) | 860, 1845 |
| SfaNI | GCATC | 3 cut(s) | 33, 98, 1528 |
| SfcI | CTRYAG | 3 cut(s) | 222, 708, 851 |
| Sfr274I | CTCGAG | 2 cut(s) | 236, 1913 |
| SinI | GGWCC | 2 cut(s) | 1347, 1924 |
| SlaI | CTCGAG | 2 cut(s) | 236, 1913 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1422, 1524 |
| SmlI | CTYRAG | 3 cut(s) | 236, 1133, 1913 |
| SmoI | CTYRAG | 3 cut(s) | 236, 1133, 1913 |
| SpeI | ACTAGT | 2 cut(s) | 335, 533 |
| SsiI | CCGC | 5 cut(s) | 109, 114, 280, 1003, 1053 |
| SspMI | CTAG | 7 cut(s) | 188, 336, 534, 755, 822, 1040, 1788 |
| SstI | GAGCTC | 1 cut(s) | 1845 |
| StyD4I | CCNGG | 4 cut(s) | 318, 359, 420, 1656 |
| StyI | CCWWGG | 3 cut(s) | 187, 460, 1920 |
| TaaI | ACNGT | 9 cut(s) | 55, 545, 786, 947, 1069, 1127, 1262, 1300, 1664 |
| TaiI | ACGT | 3 cut(s) | 1547, 1815, 2017 |
| TaqI | TCGA | 5 cut(s) | 237, 1229, 1264, 1729, 1914 |
| TatI | WGTACW | 3 cut(s) | 1776, 2213, 2227 |
| TauI | GCSGC | 1 cut(s) | 1055 |
| TfiI | GAWTC | 8 cut(s) | 127, 149, 286, 773, 794, 815, 1329, 2180 |
| Tru1I | TTAA | 9 cut(s) | 294, 789, 1200, 1215, 1386, 1431, 1638, 2021, 2202 |
| Tru9I | TTAA | 9 cut(s) | 294, 789, 1200, 1215, 1386, 1431, 1638, 2021, 2202 |
| TscAI | CASTG | 3 cut(s) | 231, 607, 2070 |
| TseFI | GTSAC | 4 cut(s) | 485, 1121, 1631, 1808 |
| TseI | GCWGC | 4 cut(s) | 111, 471, 707, 873 |
| Tsp45I | GTSAC | 4 cut(s) | 485, 1121, 1631, 1808 |
| TspGWI | ACGGA | 2 cut(s) | 1173, 2130 |
| TspRI | CASTG | 3 cut(s) | 231, 607, 2070 |
| VpaK11BI | GGWCC | 2 cut(s) | 1347, 1924 |
| VspI | ATTAAT | 1 cut(s) | 1386 |
| XapI | RAATTY | 4 cut(s) | 675, 1272, 2023, 2079 |
| XceI | RCATGY | 1 cut(s) | 659 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 965 |
| XhoI | CTCGAG | 2 cut(s) | 236, 1913 |
| XmaJI | CCTAGG | 1 cut(s) | 187 |
| XmiI | GTMKAC | 1 cut(s) | 1302 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1501 |
| XspI | CTAG | 7 cut(s) | 188, 336, 534, 755, 822, 1040, 1788 |
| ZrmI | AGTACT | 1 cut(s) | 1778 |
| Zsp2I | ATGCAT | 1 cut(s) | 661 |