MD17G1131600.v1.1

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
11600085 .. 11603198
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1131600.v1.1.491

Sequence Viewer

Length: 2178 bp
ATGGAGGTTGTGCAGTTTCTAATTCAAATTACGCTGTTTTTGTGGTCTTTGAGCAGTGCAATACCAGCAGTAGCCTCGCAGCCCAGTTTAGCAAAGCCAAATTGTCCAGCACATTGTGGTAATGATACGATAAGTATCCCATATCCTTTTGGAATCGGAGCAGATTGTTTCATGAACGCATGGTTCGAAATAACCTGTGACAATTCCACATATAATTCCCCTCGCAGACCCATACCTCGCTTGAACCATCCCAGTCTGAAACAACTTGAAGTGCTGGAGTTATCTATGAATGGCACACTAAGTGTCAGAAACCCGATTACCTTCTTTGGTGATTGCGGAACTAACAGGACACTTGCAGAGCAAGCACCCAACTTGACAGGAAGCCCGTTCGTGTTCTCGAAAAGGAACAGGCTCTTTTCAGTGGGCTGTGGTGGAATTGCCTTGATGAAGTTGATGAATGGCTCGAGTGTTGGAGGGTGCTTGTCGATTTGTGGTGACAAGGGTGATATACTTGAACAATTAAATGAGCCTGATAACTGCAATGGTATTAACTGCTGCCAGACCACCATTCCCGGCAATCTTACAAACTTCAACACTAGCTTTCAAGAAGTGAAAGGTCTCTTGAACGCGAGTGATACCACCTCTGGATCCGGAAGTTGCAAGTATGCATTCTTGGCAGACGAAGCATTTGGGATGGTGACTGGTCTTGACTATATTCATTTGGTAGGCGTCCCTGGAGTGCTCGAATGGAACTGGAGTCAATATACGGAATCCGAGATATTTGGAACAGCATCAACAACCTTTCGGGATGCTAACTCGGGCACGGTCTGCGCAAGTAACAACAGTTGCTCCTGCGGAAACGGCCTTGAAGGAAACCCCTACGTCGTTGATGGATGTCAAGAAATTGATGAATGCAAACATCGGTTTTGGTCGTTTAAATGCCTATCACGGGCTAATGTGGCCATTATAGTTATGAGCTGCATTGTTGGCCTACTGTTTATACACATTGGAGCATGGTGGTCGCACAAAGTCATAATGAAAAGGAAAGACATCAACCGCAAGCGGAAGTTTTTTAAACAAAATGGCGGTTTCTTGTTGGAGCAGCAACTATCTTCCGGTGAAGCTAACGTTGATAATATTAAATTGTTCAGTGCCGAGGAGTTGGAAAAAGCCACGGACCATTTCAGTGTAGAGAGAATTCTTGGTCAGGGAGGCCAAGGTACCGTATACAAAGGAATGTTAGCGAATGGGAAGATCGTTGCTGTGAAGAAGTCGAAAAGTGTAGTTAGTGGGGACGAAGTGAGACAATTCATCAATGAAATTGTCATTCTGTCACAAGTTATTCAAAAGAATGTGGTTAAATTAATGGGTTGCTGTTTGGAGACTGAAGTACCCCTTTTGGTTTACGAGTTTATACACAATGGAACACTCTCTCATTATATTCAGCACCAGAATGAGGAGTTTCCTCTTACATGGGAAAGGCGGTTACGAGTTGCAACCGAAGTTGCAGGTGCACTATCATACTTACACTCGGCAGTTTCCCGTCCTATTTACCACCGAGACATCAAGTCTTCGAACATACTGTTGGATGATAAATACAGAGCCAAAGTGGCAGACTTTGGGACATCAAGATCTGTCGCCATTGACAAAACACACCTTACCATGACACAGGTAAATGGAACATTCGGTTATTTGGACCCGGAGTACTTTCAGACTAGCCAATTTACGGACAAGAGTGACGTTTATAGCTATGGAGTGGTCCTTGTTGAGCTATTGACAGGAAAAAAACCAATTTTTAAGACAGAGTCACAAGAACCCATGAGCCTATCACATTATTTTCTTCTTTCCATGGACGAGAATCGTTTGTTCGATATTCTTGATGCCCGAGTTGTGAAAGATGCCAGGAAGGAAGAGATCATGGTAGTTGCTGATCTTGCAAAACGTTGCTTGAATTTGAATGGAAAAAAGCGTCCTACCATGAAAGAAGTAGAAGTGGAGCTGCAGGGAATTCAATTGCCAGTGAAAGATTTTGATGTCCAACAAAATTTTGACGTTGATCATGTCCAGACTCGAATGAACGAGGTTTGGGATGTTGATTCGGCATCGACCCATGAACCTAGCACATTATTTTCTTCACCATTTGATGAGGAGCAGCTTTTGTTTATCAGGACAGAGTGA

Protein Analysis

726

Amino Acids

80.68

Weight (kDa)

5.68

Isoelectric Point (pI)

33.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 98 1.6e-08 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 395 - 663 7e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 397 - 666 8.5e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1499
Acc16I TGCGCA 1 cut(s) 832
Acc36I ACCTGC 1 cut(s) 1499
Acc65I GGTACC 1 cut(s) 1220
AccB1I GGYRCC 1 cut(s) 1220
AccI GTMKAC 1 cut(s) 1227
AccII CGCG 1 cut(s) 629
AccIII TCCGGA 1 cut(s) 650
AciI CCGC 6 cut(s) 336, 855, 1057, 1063, 1086, 1483
AclI AACGTT 2 cut(s) 1128, 1942
AclWI GGATC 2 cut(s) 642, 655
AcoI YGGCCR 1 cut(s) 960
AcsI RAATTY 4 cut(s) 1197, 1951, 2007, 2044
AcuI CTGAAG 1 cut(s) 1407
AcyI GRCGYC 1 cut(s) 729
AdeI CACNNNGTG 2 cut(s) 116, 302
AfaI GTAC 3 cut(s) 1222, 1392, 1706
AfiI CCNNNNNNNGG 3 cut(s) 949, 1456, 1726
AhdI GACNNNNNGTC 1 cut(s) 1567
AjnI CCWGG 2 cut(s) 733, 1901
AjuI GAANNNNNNNTTGG 2 cut(s) 1568, 1600
AluBI AGCT 7 cut(s) 600, 978, 1124, 1749, 1771, 1999, 2155
AluI AGCT 7 cut(s) 600, 978, 1124, 1749, 1771, 1999, 2155
Alw21I GWGCWC 2 cut(s) 744, 1516
Alw26I GTCTC 4 cut(s) 623, 1297, 1376, 1554
Alw44I GTGCAC 1 cut(s) 1512
AlwI GGATC 2 cut(s) 642, 655
Ama87I CYCGRG 3 cut(s) 463, 817, 1884
Aor13HI TCCGGA 1 cut(s) 650
AoxI GGCC 4 cut(s) 862, 960, 988, 1213
ApaLI GTGCAC 1 cut(s) 1512
ApeKI GCWGC 6 cut(s) 79, 555, 978, 1102, 1999, 2152
ApoI RAATTY 4 cut(s) 1197, 1951, 2007, 2044
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
AseI ATTAAT 1 cut(s) 1364
Asp718I GGTACC 1 cut(s) 1220
AspLEI GCGC 1 cut(s) 833
AspS9I GGNCC 3 cut(s) 1177, 1696, 1759
AsuC2I CCSGG 2 cut(s) 573, 1700
AsuHPI GGTGA 6 cut(s) 341, 506, 515, 709, 1130, 2127
AsuII TTCGAA 2 cut(s) 186, 1574
AvaI CYCGRG 3 cut(s) 463, 817, 1884
AvaII GGWCC 3 cut(s) 1177, 1696, 1759
BaeGI GKGCMC 2 cut(s) 824, 1516
BaeI ACNNNNGTAYC 2 cut(s) 1374, 1407
BalI TGGCCA 1 cut(s) 962
BamHI GGATCC 1 cut(s) 647
BanI GGYRCC 1 cut(s) 1220
BbsI GAAGAC 1 cut(s) 1563
Bbv12I GWGCWC 2 cut(s) 744, 1516
BbvI GCAGC 6 cut(s) 91, 542, 965, 1114, 1986, 2164
BccI CCATC 3 cut(s) 255, 688, 884
BceAI ACGGC 1 cut(s) 877
BcgI CGANNNNNNTGC 4 cut(s) 57, 91, 1002, 1036
BciT130I CCWGG 2 cut(s) 735, 1903
BciVI GTATCC 1 cut(s) 146
BclI TGATCA 1 cut(s) 2056
BcnI CCSGG 2 cut(s) 573, 1700
BcoDI GTCTC 4 cut(s) 623, 1297, 1376, 1554
BfaI CTAG 3 cut(s) 597, 1716, 2118
BfmI CTRYAG 1 cut(s) 2000
BfuAI ACCTGC 1 cut(s) 1499
BfuI GTATCC 1 cut(s) 146
BglI GCCNNNNNGGC 1 cut(s) 1610
BglII AGATCT 1 cut(s) 1631
BisI GCNGC 6 cut(s) 80, 556, 979, 1103, 2000, 2153
BlsI GCNGC 6 cut(s) 81, 557, 980, 1104, 2001, 2154
BmcAI AGTACT 1 cut(s) 1706
Bme1390I CCNGG 4 cut(s) 573, 735, 1700, 1903
Bme18I GGWCC 3 cut(s) 1177, 1696, 1759
BmeRI GACNNNNNGTC 1 cut(s) 1567
BmeT110I CYCGRG 3 cut(s) 463, 817, 1884
BmgT120I GGNCC 3 cut(s) 1177, 1696, 1759
BmiI GGNNCC 3 cut(s) 649, 1222, 1698
BmrFI CCNGG 4 cut(s) 573, 735, 1700, 1903
BmrI ACTGGG 2 cut(s) 78, 246
BmsI GCATC 5 cut(s) 799, 800, 1870, 1888, 2111
BmuI ACTGGG 2 cut(s) 78, 246
BpiI GAAGAC 1 cut(s) 1563
BpmI CTGGAG 3 cut(s) 296, 756, 775
Bpu14I TTCGAA 2 cut(s) 186, 1574
BpuMI CCSGG 2 cut(s) 573, 1700
BsaBI GATNNNNATC 1 cut(s) 134
BsaHI GRCGYC 1 cut(s) 729
BsaI GGTCTC 1 cut(s) 623
BsaJI CCNNGG 5 cut(s) 733, 1155, 1173, 1216, 1848
BsaWI WCCGGW 2 cut(s) 650, 1115
BsaXI ACNNNNNCTCC 2 cut(s) 833, 863
Bsc4I CCNNNNNNNGG 3 cut(s) 949, 1456, 1726
Bse1I ACTGG 5 cut(s) 84, 252, 706, 758, 2018
Bse3DI GCAATG 1 cut(s) 547
Bse8I GATNNNNATC 1 cut(s) 134
BseAI TCCGGA 1 cut(s) 650
BseBI CCWGG 2 cut(s) 735, 1903
BseDI CCNNGG 5 cut(s) 733, 1155, 1173, 1216, 1848
BseGI GGATG 6 cut(s) 247, 699, 814, 899, 1594, 2095
BseJI GATNNNNATC 1 cut(s) 134
BseLI CCNNNNNNNGG 3 cut(s) 949, 1456, 1726
BseMI GCAATG 1 cut(s) 547
BseNI ACTGG 5 cut(s) 84, 252, 706, 758, 2018
BseRI GAGGAG 3 cut(s) 1172, 1472, 2162
BseSI GKGCMC 2 cut(s) 824, 1516
BseXI GCAGC 6 cut(s) 91, 542, 965, 1114, 1986, 2164
BsgI GTGCAG 1 cut(s) 32
Bsh1236I CGCG 1 cut(s) 629
BshFI GGCC 4 cut(s) 864, 962, 990, 1215
BshNI GGYRCC 1 cut(s) 1220
BsiHKAI GWGCWC 2 cut(s) 744, 1516
BsiHKCI CYCGRG 3 cut(s) 463, 817, 1884
BsiSI CCGG 4 cut(s) 573, 651, 1116, 1700
BslFI GGGAC 3 cut(s) 716, 1307, 1636
BslI CCNNNNNNNGG 3 cut(s) 949, 1456, 1726
BsmAI GTCTC 4 cut(s) 623, 1297, 1376, 1554
BsmFI GGGAC 3 cut(s) 716, 1307, 1636
BsmI GAATGC 2 cut(s) 668, 917
BsnI GGCC 4 cut(s) 864, 962, 990, 1215
Bso31I GGTCTC 1 cut(s) 623
BsoBI CYCGRG 3 cut(s) 463, 817, 1884
Bsp119I TTCGAA 2 cut(s) 186, 1574
Bsp1286I GDGCHC 3 cut(s) 744, 824, 1516
Bsp13I TCCGGA 1 cut(s) 650
Bsp143I GATC 6 cut(s) 647, 1254, 1631, 1914, 1930, 2056
Bsp19I CCATGG 1 cut(s) 1848
BspACI CCGC 6 cut(s) 336, 855, 1057, 1063, 1086, 1483
BspANI GGCC 4 cut(s) 864, 962, 990, 1215
BspEI TCCGGA 1 cut(s) 650
BspFNI CGCG 1 cut(s) 629
BspHI TCATGA 1 cut(s) 171
BspLI GGNNCC 3 cut(s) 649, 1222, 1698
BspMAI CTGCAG 1 cut(s) 2004
BspMI ACCTGC 1 cut(s) 1499
BspPI GGATC 2 cut(s) 642, 655
BspT104I TTCGAA 2 cut(s) 186, 1574
BspT107I GGYRCC 1 cut(s) 1220
BspTNI GGTCTC 1 cut(s) 623
BsrDI GCAATG 1 cut(s) 547
BsrI ACTGG 5 cut(s) 84, 252, 706, 758, 2018
BssECI CCNNGG 5 cut(s) 733, 1155, 1173, 1216, 1848
BssMI GATC 6 cut(s) 647, 1254, 1631, 1914, 1930, 2056
BssNAI GTATAC 1 cut(s) 1228
BssNI GRCGYC 1 cut(s) 729
BssT1I CCWWGG 2 cut(s) 1216, 1848
Bst1107I GTATAC 1 cut(s) 1228
Bst2UI CCWGG 2 cut(s) 735, 1903
Bst4CI ACNGT 5 cut(s) 826, 845, 996, 1225, 1584
Bst6I CTCTTC 1 cut(s) 1905
BstACI GRCGYC 1 cut(s) 729
BstAPI GCANNNNNTGC 1 cut(s) 828
BstBI TTCGAA 2 cut(s) 186, 1574
BstC8I GCNNGC 2 cut(s) 363, 1061
BstDEI CTNAG 1 cut(s) 299
BstDSI CCRYGG 2 cut(s) 1173, 1848
BstF5I GGATG 6 cut(s) 247, 699, 814, 899, 1594, 2095
BstFNI CGCG 1 cut(s) 629
BstHHI GCGC 1 cut(s) 833
BstKTI GATC 6 cut(s) 650, 1257, 1634, 1917, 1933, 2059
BstMAI GTCTC 4 cut(s) 623, 1297, 1376, 1554
BstMBI GATC 6 cut(s) 647, 1254, 1631, 1914, 1930, 2056
BstNI CCWGG 2 cut(s) 735, 1903
BstSCI CCNGG 4 cut(s) 571, 733, 1698, 1901
BstSFI CTRYAG 1 cut(s) 2000
BstSLI GKGCMC 2 cut(s) 824, 1516
BstUI CGCG 1 cut(s) 629
BstV1I GCAGC 6 cut(s) 91, 542, 965, 1114, 1986, 2164
BstV2I GAAGAC 1 cut(s) 1563
BstX2I RGATCY 2 cut(s) 647, 1631
BstYI RGATCY 2 cut(s) 647, 1631
BstZ17I GTATAC 1 cut(s) 1228
BsuI GTATCC 1 cut(s) 146
BsuRI GGCC 4 cut(s) 864, 962, 990, 1215
BtgI CCRYGG 2 cut(s) 1173, 1848
BtsCI GGATG 6 cut(s) 247, 699, 814, 899, 1594, 2095
BtsI GCAGTG 1 cut(s) 61
BtsIMutI CAGTG 5 cut(s) 61, 426, 1156, 1192, 2025
BveI ACCTGC 1 cut(s) 1499
Cac8I GCNNGC 2 cut(s) 363, 1061
CciI TCATGA 1 cut(s) 171
CfoI GCGC 1 cut(s) 833
Cfr13I GGNCC 3 cut(s) 1177, 1696, 1759
CseI GACGC 2 cut(s) 718, 1958
Csp6I GTAC 3 cut(s) 1221, 1391, 1705
CviQI GTAC 3 cut(s) 1221, 1391, 1705
DdeI CTNAG 1 cut(s) 299
DpnI GATC 6 cut(s) 649, 1256, 1633, 1916, 1932, 2058
DpnII GATC 6 cut(s) 647, 1254, 1631, 1914, 1930, 2056
DraI TTTAAA 2 cut(s) 937, 1075
DraIII CACNNNGTG 2 cut(s) 116, 302
DriI GACNNNNNGTC 1 cut(s) 1567
EaeI YGGCCR 1 cut(s) 960
Eam1104I CTCTTC 1 cut(s) 1905
Eam1105I GACNNNNNGTC 1 cut(s) 1567
EarI CTCTTC 1 cut(s) 1905
Eco130I CCWWGG 2 cut(s) 1216, 1848
Eco31I GGTCTC 1 cut(s) 623
Eco47I GGWCC 3 cut(s) 1177, 1696, 1759
Eco57I CTGAAG 1 cut(s) 1407
Eco88I CYCGRG 3 cut(s) 463, 817, 1884
EcoRI GAATTC 2 cut(s) 1197, 2007
EcoRII CCWGG 2 cut(s) 733, 1901
EcoT14I CCWWGG 2 cut(s) 1216, 1848
EcoT22I ATGCAT 1 cut(s) 670
ErhI CCWWGG 2 cut(s) 1216, 1848
FalI AAGNNNNNCTT 2 cut(s) 1380, 1412
FaqI GGGAC 3 cut(s) 716, 1307, 1636
FbaI TGATCA 1 cut(s) 2056
FblI GTMKAC 1 cut(s) 1227
Fnu4HI GCNGC 6 cut(s) 80, 556, 979, 1103, 2000, 2153
FokI GGATG 6 cut(s) 234, 706, 821, 906, 1601, 2102
Fsp4HI GCNGC 6 cut(s) 80, 556, 979, 1103, 2000, 2153
FspBI CTAG 3 cut(s) 597, 1716, 2118
FspI TGCGCA 1 cut(s) 832
GlaI GCGC 1 cut(s) 832
GluI GCNGC 6 cut(s) 80, 556, 979, 1103, 2000, 2153
GsuI CTGGAG 3 cut(s) 296, 756, 775
HaeIII GGCC 4 cut(s) 864, 962, 990, 1215
HapII CCGG 4 cut(s) 573, 651, 1116, 1700
HgaI GACGC 2 cut(s) 718, 1958
HhaI GCGC 1 cut(s) 833
Hin1I GRCGYC 1 cut(s) 729
Hin6I GCGC 1 cut(s) 831
HinP1I GCGC 1 cut(s) 831
HinfI GANTC 7 cut(s) 153, 757, 770, 1805, 1858, 2068, 2096
HpaII CCGG 4 cut(s) 573, 651, 1116, 1700
HphI GGTGA 6 cut(s) 341, 506, 515, 709, 1130, 2127
Hpy166II GTNNAC 3 cut(s) 1228, 1405, 1514
Hpy188I TCNGA 5 cut(s) 158, 258, 308, 775, 1713
Hpy8I GTNNAC 3 cut(s) 1228, 1405, 1514
Hpy99I CGWCG 1 cut(s) 887
HpyAV CCTTC 3 cut(s) 331, 863, 1900
HpyCH4III ACNGT 5 cut(s) 826, 845, 996, 1225, 1584
HpyCH4IV ACGT 5 cut(s) 882, 1128, 1740, 1942, 2052
HpyF3I CTNAG 1 cut(s) 299
HpySE526I ACGT 5 cut(s) 882, 1128, 1740, 1942, 2052
Hsp92I GRCGYC 1 cut(s) 729
HspAI GCGC 1 cut(s) 831
Kpn2I TCCGGA 1 cut(s) 650
KpnI GGTACC 1 cut(s) 1224
Ksp22I TGATCA 1 cut(s) 2056
Kzo9I GATC 6 cut(s) 647, 1254, 1631, 1914, 1930, 2056
LmnI GCTCC 6 cut(s) 158, 854, 1010, 1099, 1996, 2149
Lsp1109I GCAGC 6 cut(s) 91, 542, 965, 1114, 1986, 2164
LweI GCATC 5 cut(s) 799, 800, 1870, 1888, 2111
MaeI CTAG 3 cut(s) 597, 1716, 2118
MaeII ACGT 5 cut(s) 882, 1128, 1740, 1942, 2052
MaeIII GTNAC 8 cut(s) 197, 494, 697, 836, 1332, 1485, 1736, 1806
MalI GATC 6 cut(s) 649, 1256, 1633, 1916, 1932, 2058
MboI GATC 6 cut(s) 647, 1254, 1631, 1914, 1930, 2056
MboII GAAGA 7 cut(s) 1104, 1264, 1279, 1563, 1832, 1922, 2124
MfeI CAATTG 1 cut(s) 2012
MflI RGATCY 2 cut(s) 647, 1631
MhlI GDGCHC 3 cut(s) 744, 824, 1516
MlsI TGGCCA 1 cut(s) 962
MluNI TGGCCA 1 cut(s) 962
MlyI GAGTC 3 cut(s) 766, 1814, 2062
MmeI TCCRAC 5 cut(s) 451, 1077, 1143, 1566, 2062
Mox20I TGGCCA 1 cut(s) 962
Mph1103I ATGCAT 1 cut(s) 670
MroI TCCGGA 1 cut(s) 650
MscI TGGCCA 1 cut(s) 962
MseI TTAA 8 cut(s) 521, 549, 936, 1074, 1140, 1359, 1364, 1797
MslI CAYNNNNRTG 2 cut(s) 1185, 1452
Msp20I TGGCCA 1 cut(s) 962
MspI CCGG 4 cut(s) 573, 651, 1116, 1700
MspR9I CCNGG 4 cut(s) 573, 735, 1700, 1903
MunI CAATTG 1 cut(s) 2012
Mva1269I GAATGC 2 cut(s) 668, 917
MvaI CCWGG 2 cut(s) 735, 1903
MvnI CGCG 1 cut(s) 629
NciI CCSGG 2 cut(s) 573, 1700
NcoI CCATGG 1 cut(s) 1848
NdeII GATC 6 cut(s) 647, 1254, 1631, 1914, 1930, 2056
NlaIV GGNNCC 3 cut(s) 649, 1222, 1698
NmeAIII GCCGAG 2 cut(s) 1180, 1511
NmuCI GTSAC 6 cut(s) 197, 494, 697, 1332, 1736, 1806
NsbI TGCGCA 1 cut(s) 832
NsiI ATGCAT 1 cut(s) 670
NspV TTCGAA 2 cut(s) 186, 1574
PaeR7I CTCGAG 1 cut(s) 463
PagI TCATGA 1 cut(s) 171
PaqCI CACCTGC 1 cut(s) 1499
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 2 cut(s) 668, 917
PfeI GAWTC 4 cut(s) 153, 770, 1858, 2096
PflFI GACNNNGTC 1 cut(s) 1804
PkrI GCNGC 6 cut(s) 81, 557, 980, 1104, 2001, 2154
PleI GAGTC 3 cut(s) 765, 1813, 2062
PpsI GAGTC 3 cut(s) 765, 1813, 2062
PshBI ATTAAT 1 cut(s) 1364
Psp1406I AACGTT 2 cut(s) 1128, 1942
Psp6I CCWGG 2 cut(s) 733, 1901
PspGI CCWGG 2 cut(s) 733, 1901
PspN4I GGNNCC 3 cut(s) 649, 1222, 1698
PspPI GGNCC 3 cut(s) 1177, 1696, 1759
PspXI VCTCGAGB 1 cut(s) 463
PstI CTGCAG 1 cut(s) 2004
PsuI RGATCY 2 cut(s) 647, 1631
PsyI GACNNNGTC 1 cut(s) 1804
RsaI GTAC 3 cut(s) 1222, 1392, 1706
RsaNI GTAC 3 cut(s) 1221, 1391, 1705
RseI CAYNNNNRTG 2 cut(s) 1185, 1452
SaqAI TTAA 8 cut(s) 521, 549, 936, 1074, 1140, 1359, 1364, 1797
SatI GCNGC 6 cut(s) 80, 556, 979, 1103, 2000, 2153
Sau3AI GATC 6 cut(s) 647, 1254, 1631, 1914, 1930, 2056
Sau96I GGNCC 3 cut(s) 1177, 1696, 1759
ScaI AGTACT 1 cut(s) 1706
SchI GAGTC 3 cut(s) 766, 1814, 2062
ScrFI CCNGG 4 cut(s) 573, 735, 1700, 1903
SduI GDGCHC 3 cut(s) 744, 824, 1516
SfaNI GCATC 5 cut(s) 799, 800, 1870, 1888, 2111
SfcI CTRYAG 1 cut(s) 2000
Sfr274I CTCGAG 1 cut(s) 463
SfuI TTCGAA 2 cut(s) 186, 1574
SinI GGWCC 3 cut(s) 1177, 1696, 1759
SlaI CTCGAG 1 cut(s) 463
SmiMI CAYNNNNRTG 2 cut(s) 1185, 1452
SmlI CTYRAG 1 cut(s) 463
SmoI CTYRAG 1 cut(s) 463
SsiI CCGC 6 cut(s) 336, 855, 1057, 1063, 1086, 1483
SspI AATATT 1 cut(s) 1138
SspMI CTAG 3 cut(s) 597, 1716, 2118
StyD4I CCNGG 4 cut(s) 571, 733, 1698, 1901
StyI CCWWGG 2 cut(s) 1216, 1848
TaaI ACNGT 5 cut(s) 826, 845, 996, 1225, 1584
TaiI ACGT 5 cut(s) 885, 1131, 1743, 1945, 2055
TatI WGTACW 1 cut(s) 1704
TfiI GAWTC 4 cut(s) 153, 770, 1858, 2096
Tru1I TTAA 8 cut(s) 521, 549, 936, 1074, 1140, 1359, 1364, 1797
Tru9I TTAA 8 cut(s) 521, 549, 936, 1074, 1140, 1359, 1364, 1797
TscAI CASTG 5 cut(s) 61, 426, 1156, 1192, 2025
TseFI GTSAC 6 cut(s) 197, 494, 697, 1332, 1736, 1806
TseI GCWGC 6 cut(s) 79, 555, 978, 1102, 1999, 2152
Tsp45I GTSAC 6 cut(s) 197, 494, 697, 1332, 1736, 1806
TspGWI ACGGA 3 cut(s) 782, 1190, 1742
TspRI CASTG 5 cut(s) 61, 426, 1156, 1192, 2025
Tth111I GACNNNGTC 1 cut(s) 1804
VneI GTGCAC 1 cut(s) 1512
VpaK11BI GGWCC 3 cut(s) 1177, 1696, 1759
VspI ATTAAT 1 cut(s) 1364
XapI RAATTY 4 cut(s) 1197, 1951, 2007, 2044
XhoI CTCGAG 1 cut(s) 463
XmiI GTMKAC 1 cut(s) 1227
XspI CTAG 3 cut(s) 597, 1716, 2118
ZrmI AGTACT 1 cut(s) 1706
Zsp2I ATGCAT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.