Rh2CG483300

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
64843654 .. 64863735
20082 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG483300.1

Sequence Viewer

Length: 1269 bp
ATGATCGTCAATATGCTTTACAGCTTCTATAGATCATACTTGTTCCATCTGCTTAGTCCAGAAGAATTAATGATGATGCAAATTCCAGTTCATCAAATGATATTCATTTTGCTGTTATCCATATGCCGCGCAAGTACTGCTGCACTACAGATGGCAATAGGTGATTGCCCAACGGAGTGTGGAGACGTTATCATCCCGTACCCTTTCGGGATTGGACCTAATGCAAGTTGTTACTATGACGAATGGTTTCAGATCGACTGCAACGAATCGACCAAAGGGAAGCCTTTCTTGACGCGTACCAAATTGGAGGTGCTGAATATATCTACCGAAGGAAGGCTTCAGGTGTACAGCCCCGTTACATTCTTCTGCGAGGGAAATGATAGTAGCCAAGCGGCGGATTTAAGGGACAGCCCTTTCGTCTACTCTCAAAGCTACAACATATTCACTGCAGTGAGTTGCAATTCCTTTGCCTCGTTGAGTTCCGCAGACTTTGTTGTTGGCGGATGCAGGTCAGTGTGTGATCAAGATTCTGACTACCTGAGTTGCGATATCGGTATTAACTGTTGTCAGACTAGTATTCCTCCATACCTCACTGTTATTAATGCTACCTTATCTGAGAGTACCACAAATTGCAGTAAGTTTGCCTTCCTGGTTGACAAAGATTGGTTTGGGAACAGCACCACTTCATCATCAACAATTTCTGACATTACAGCTACCATGAAGAGTATGCGCAAGGTTCCTGTAGCACTAGACTGGAGCATAAACAACCACACTAGGCAATTTGATTCATTTAACAAGTTCATTGTTGATCGTCATCAGTATCAACTCAATATGTATAATTACTACATTAATTTCTCAACGATTTGGGACCCGTCTTGCTATATTTACACTTCGCGTGCAGTCGACTGGTCTGAAATTTATTGTTCCTGCAGCAGTGGTTTCGAAGGAAATCCGTATCTCGGAGAAGATTCTTGTTATGACATTGATGAATGCCAGGATGCTTACGCATGCTTTGGCCACACCAAGTGTGTGAACGAGTATGGTTGGTACCGATGTGAGGACGACCGGAGAAAGGCTAAATGGATCCTTGCCGCAGGTTTGAGCTCGAGCCTTGGACTCTTATTGTTGCTTATTGGAAAATTGACAGTGGCTTGTGGTGAAAGAGGTAGAGCAATTGGGCAGCAGTGGCGGTTCGAGGGGGAGGAGGCCTTAGGTACAAGAGGGGAGGGAGACGATGAGGTGGCTCAAGGCGGAGACCTTGGTGCTTGA

Protein Analysis

422

Amino Acids

47.25

Weight (kDa)

4.56

Isoelectric Point (pI)

46.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 56 - 113 1.3e-12 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 731
Acc36I ACCTGC 2 cut(s) 498, 1085
Acc65I GGTACC 1 cut(s) 1047
AccB1I GGYRCC 1 cut(s) 1047
AccI GTMKAC 2 cut(s) 420, 903
AccII CGCG 3 cut(s) 129, 295, 895
AciI CCGC 8 cut(s) 127, 392, 395, 483, 501, 1092, 1189, 1251
AclWI GGATC 2 cut(s) 1078, 1091
AcoI YGGCCR 1 cut(s) 1015
AcsI RAATTY 2 cut(s) 81, 915
AcuI CTGAAG 1 cut(s) 323
AdeI CACNNNGTG 1 cut(s) 1026
AfaI GTAC 7 cut(s) 136, 200, 298, 347, 622, 1049, 1216
AfiI CCNNNNNNNGG 5 cut(s) 333, 394, 959, 1057, 1072
AflIII ACRYGT 1 cut(s) 293
AhlI ACTAGT 1 cut(s) 572
AjnI CCWGG 2 cut(s) 648, 993
AleI CACNNNNGTG 1 cut(s) 449
AluBI AGCT 4 cut(s) 24, 432, 713, 1104
AluI AGCT 4 cut(s) 24, 432, 713, 1104
Alw21I GWGCWC 1 cut(s) 1106
Alw26I GTCTC 3 cut(s) 177, 1224, 1248
AlwI GGATC 2 cut(s) 1078, 1091
Ama87I CYCGRG 1 cut(s) 1105
AoxI GGCC 2 cut(s) 1015, 1206
ApeKI GCWGC 3 cut(s) 140, 930, 1180
ApoI RAATTY 2 cut(s) 81, 915
ArsI GACNNNNNNTTYG 2 cut(s) 398, 430
AseI ATTAAT 3 cut(s) 68, 600, 849
Asp700I GAANNNNTTC 2 cut(s) 246, 284
Asp718I GGTACC 1 cut(s) 1047
AspLEI GCGC 2 cut(s) 131, 732
AspS9I GGNCC 2 cut(s) 215, 868
AsuHPI GGTGA 2 cut(s) 173, 1169
AsuII TTCGAA 1 cut(s) 942
AvaI CYCGRG 1 cut(s) 1105
AvaII GGWCC 2 cut(s) 215, 868
AxyI CCTNAGG 1 cut(s) 1210
BaeI ACNNNNGTAYC 2 cut(s) 1039, 1072
BalI TGGCCA 1 cut(s) 1017
BamHI GGATCC 1 cut(s) 1083
BanI GGYRCC 1 cut(s) 1047
BanII GRGCYC 1 cut(s) 1106
Bbv12I GWGCWC 1 cut(s) 1106
BbvI GCAGC 3 cut(s) 127, 942, 1192
BccI CCATC 2 cut(s) 54, 145
BcgI CGANNNNNNTGC 2 cut(s) 922, 956
BciT130I CCWGG 2 cut(s) 650, 995
BclI TGATCA 1 cut(s) 520
BcoDI GTCTC 3 cut(s) 177, 1224, 1248
BcuI ACTAGT 1 cut(s) 572
BfaI CTAG 3 cut(s) 573, 749, 774
BfmI CTRYAG 5 cut(s) 28, 146, 447, 741, 928
BfuAI ACCTGC 2 cut(s) 498, 1085
BisI GCNGC 6 cut(s) 127, 141, 393, 931, 1092, 1181
BlsI GCNGC 6 cut(s) 128, 142, 394, 932, 1093, 1182
BmcAI AGTACT 1 cut(s) 136
Bme1390I CCNGG 2 cut(s) 650, 995
Bme18I GGWCC 2 cut(s) 215, 868
BmeT110I CYCGRG 1 cut(s) 1105
BmgT120I GGNCC 2 cut(s) 215, 868
BmiI GGNNCC 5 cut(s) 738, 869, 870, 1049, 1085
BmrFI CCNGG 2 cut(s) 650, 995
BmsI GCATC 3 cut(s) 66, 494, 988
BpmI CTGGAG 1 cut(s) 775
Bpu14I TTCGAA 1 cut(s) 942
BpuEI CTTGAG 1 cut(s) 1230
BsaBI GATNNNNATC 1 cut(s) 813
BsaI GGTCTC 1 cut(s) 1248
BsaJI CCNNGG 2 cut(s) 1111, 1258
BsaWI WCCGGW 1 cut(s) 1065
Bsc4I CCNNNNNNNGG 5 cut(s) 333, 394, 959, 1057, 1072
Bse1I ACTGG 3 cut(s) 86, 758, 911
Bse21I CCTNAGG 1 cut(s) 1210
Bse8I GATNNNNATC 1 cut(s) 813
BseBI CCWGG 2 cut(s) 650, 995
BseDI CCNNGG 2 cut(s) 1111, 1258
BseGI GGATG 3 cut(s) 192, 509, 1003
BseJI GATNNNNATC 1 cut(s) 813
BseLI CCNNNNNNNGG 5 cut(s) 333, 394, 959, 1057, 1072
BseMII CTCAG 2 cut(s) 530, 606
BseNI ACTGG 3 cut(s) 86, 758, 911
BseRI GAGGAG 1 cut(s) 1217
BseXI GCAGC 3 cut(s) 127, 942, 1192
BsgI GTGCAG 2 cut(s) 126, 918
Bsh1236I CGCG 3 cut(s) 129, 295, 895
Bsh1285I CGRYCG 1 cut(s) 1066
BshFI GGCC 2 cut(s) 1017, 1208
BshNI GGYRCC 1 cut(s) 1047
BsiEI CGRYCG 1 cut(s) 1066
BsiHKAI GWGCWC 1 cut(s) 1106
BsiHKCI CYCGRG 1 cut(s) 1105
BsiSI CCGG 1 cut(s) 1066
BslFI GGGAC 2 cut(s) 419, 881
BslI CCNNNNNNNGG 5 cut(s) 333, 394, 959, 1057, 1072
BsmAI GTCTC 3 cut(s) 177, 1224, 1248
BsmBI CGTCTC 2 cut(s) 177, 1224
BsmFI GGGAC 2 cut(s) 419, 881
BsmI GAATGC 1 cut(s) 995
BsnI GGCC 2 cut(s) 1017, 1208
Bso31I GGTCTC 1 cut(s) 1248
BsoBI CYCGRG 1 cut(s) 1105
Bsp119I TTCGAA 1 cut(s) 942
Bsp1286I GDGCHC 1 cut(s) 1106
Bsp1407I TGTACA 1 cut(s) 345
Bsp143I GATC 6 cut(s) 3, 32, 252, 520, 808, 1083
BspACI CCGC 8 cut(s) 127, 392, 395, 483, 501, 1092, 1189, 1251
BspANI GGCC 2 cut(s) 1017, 1208
BspCNI CTCAG 2 cut(s) 531, 607
BspFNI CGCG 3 cut(s) 129, 295, 895
BspLI GGNNCC 5 cut(s) 738, 869, 870, 1049, 1085
BspMAI CTGCAG 2 cut(s) 451, 932
BspMI ACCTGC 2 cut(s) 498, 1085
BspPI GGATC 2 cut(s) 1078, 1091
BspT104I TTCGAA 1 cut(s) 942
BspT107I GGYRCC 1 cut(s) 1047
BspTNI GGTCTC 1 cut(s) 1248
BsrGI TGTACA 1 cut(s) 345
BsrI ACTGG 3 cut(s) 86, 758, 911
BssECI CCNNGG 2 cut(s) 1111, 1258
BssMI GATC 6 cut(s) 3, 32, 252, 520, 808, 1083
BssT1I CCWWGG 2 cut(s) 1111, 1258
Bst2UI CCWGG 2 cut(s) 650, 995
Bst4CI ACNGT 3 cut(s) 563, 595, 1147
Bst6I CTCTTC 1 cut(s) 716
BstAPI GCANNNNNTGC 1 cut(s) 137
BstAUI TGTACA 1 cut(s) 345
BstBI TTCGAA 1 cut(s) 942
BstC8I GCNNGC 2 cut(s) 897, 1009
BstDEI CTNAG 4 cut(s) 53, 539, 615, 1210
BstF5I GGATG 3 cut(s) 192, 509, 1003
BstFNI CGCG 3 cut(s) 129, 295, 895
BstHHI GCGC 2 cut(s) 131, 732
BstKTI GATC 6 cut(s) 6, 35, 255, 523, 811, 1086
BstMAI GTCTC 3 cut(s) 177, 1224, 1248
BstMBI GATC 6 cut(s) 3, 32, 252, 520, 808, 1083
BstMCI CGRYCG 1 cut(s) 1066
BstMWI GCNNNNNNNGC 2 cut(s) 137, 1186
BstNI CCWGG 2 cut(s) 650, 995
BstNSI RCATGY 1 cut(s) 1011
BstSCI CCNGG 2 cut(s) 648, 993
BstSFI CTRYAG 5 cut(s) 28, 146, 447, 741, 928
BstUI CGCG 3 cut(s) 129, 295, 895
BstV1I GCAGC 3 cut(s) 127, 942, 1192
BstX2I RGATCY 1 cut(s) 1083
BstYI RGATCY 1 cut(s) 1083
Bsu36I CCTNAGG 1 cut(s) 1210
BsuRI GGCC 2 cut(s) 1017, 1208
BtsCI GGATG 3 cut(s) 192, 509, 1003
BtsI GCAGTG 4 cut(s) 444, 456, 940, 1190
BtsIMutI CAGTG 7 cut(s) 444, 456, 519, 591, 940, 1152, 1190
BveI ACCTGC 2 cut(s) 498, 1085
Cac8I GCNNGC 2 cut(s) 897, 1009
CfoI GCGC 2 cut(s) 131, 732
Cfr13I GGNCC 2 cut(s) 215, 868
CseI GACGC 1 cut(s) 301
Csp6I GTAC 7 cut(s) 135, 199, 297, 346, 621, 1048, 1215
CviAII CATG 2 cut(s) 718, 1008
CviQI GTAC 7 cut(s) 135, 199, 297, 346, 621, 1048, 1215
DdeI CTNAG 4 cut(s) 53, 539, 615, 1210
DpnI GATC 6 cut(s) 5, 34, 254, 522, 810, 1085
DpnII GATC 6 cut(s) 3, 32, 252, 520, 808, 1083
DraIII CACNNNGTG 1 cut(s) 1026
EaeI YGGCCR 1 cut(s) 1015
Eam1104I CTCTTC 1 cut(s) 716
EarI CTCTTC 1 cut(s) 716
EciI GGCGGA 3 cut(s) 410, 516, 1266
Ecl136II GAGCTC 1 cut(s) 1104
Eco130I CCWWGG 2 cut(s) 1111, 1258
Eco147I AGGCCT 1 cut(s) 1208
Eco24I GRGCYC 1 cut(s) 1106
Eco31I GGTCTC 1 cut(s) 1248
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 2 cut(s) 215, 868
Eco53kI GAGCTC 1 cut(s) 1104
Eco57I CTGAAG 1 cut(s) 323
Eco81I CCTNAGG 1 cut(s) 1210
Eco88I CYCGRG 1 cut(s) 1105
EcoICRI GAGCTC 1 cut(s) 1104
EcoO109I RGGNCCY 1 cut(s) 868
EcoRII CCWGG 2 cut(s) 648, 993
EcoRV GATATC 1 cut(s) 550
EcoT14I CCWWGG 2 cut(s) 1111, 1258
EcoT38I GRGCYC 1 cut(s) 1106
ErhI CCWWGG 2 cut(s) 1111, 1258
Esp3I CGTCTC 2 cut(s) 177, 1224
FaeI CATG 2 cut(s) 721, 1011
FalI AAGNNNNNCTT 6 cut(s) 272, 304, 321, 353, 629, 661
FaqI GGGAC 2 cut(s) 419, 881
FatI CATG 2 cut(s) 717, 1007
FauNDI CATATG 1 cut(s) 122
FbaI TGATCA 1 cut(s) 520
FblI GTMKAC 2 cut(s) 420, 903
Fnu4HI GCNGC 6 cut(s) 127, 141, 393, 931, 1092, 1181
FokI GGATG 3 cut(s) 179, 516, 1010
FriOI GRGCYC 1 cut(s) 1106
Fsp4HI GCNGC 6 cut(s) 127, 141, 393, 931, 1092, 1181
FspBI CTAG 3 cut(s) 573, 749, 774
FspI TGCGCA 1 cut(s) 731
GlaI GCGC 2 cut(s) 130, 731
GluI GCNGC 6 cut(s) 127, 141, 393, 931, 1092, 1181
GsuI CTGGAG 1 cut(s) 775
HaeIII GGCC 2 cut(s) 1017, 1208
HapII CCGG 1 cut(s) 1066
HgaI GACGC 1 cut(s) 301
HhaI GCGC 2 cut(s) 131, 732
Hin1II CATG 2 cut(s) 721, 1011
Hin6I GCGC 2 cut(s) 129, 730
HinP1I GCGC 2 cut(s) 129, 730
HincII GTYRAC 2 cut(s) 655, 904
HindII GTYRAC 2 cut(s) 655, 904
HinfI GANTC 5 cut(s) 266, 527, 785, 968, 1116
HpaII CCGG 1 cut(s) 1066
HphI GGTGA 2 cut(s) 173, 1169
Hpy166II GTNNAC 5 cut(s) 346, 421, 655, 904, 1033
Hpy188I TCNGA 7 cut(s) 252, 532, 570, 616, 703, 913, 962
Hpy188III TCNNGA 4 cut(s) 59, 208, 289, 524
Hpy8I GTNNAC 5 cut(s) 346, 421, 655, 904, 1033
HpyAV CCTTC 4 cut(s) 323, 327, 655, 938
HpyCH4III ACNGT 3 cut(s) 563, 595, 1147
HpyCH4IV ACGT 1 cut(s) 186
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 1186
HpyF3I CTNAG 4 cut(s) 53, 539, 615, 1210
HpySE526I ACGT 1 cut(s) 186
Hsp92II CATG 2 cut(s) 721, 1011
HspAI GCGC 2 cut(s) 129, 730
KflI GGGWCCC 1 cut(s) 868
KpnI GGTACC 1 cut(s) 1051
Ksp22I TGATCA 1 cut(s) 520
Kzo9I GATC 6 cut(s) 3, 32, 252, 520, 808, 1083
LmnI GCTCC 1 cut(s) 756
Lsp1109I GCAGC 3 cut(s) 127, 942, 1192
LweI GCATC 3 cut(s) 66, 494, 988
MaeI CTAG 3 cut(s) 573, 749, 774
MaeII ACGT 1 cut(s) 186
MaeIII GTNAC 2 cut(s) 230, 355
MalI GATC 6 cut(s) 5, 34, 254, 522, 810, 1085
MboI GATC 6 cut(s) 3, 32, 252, 520, 808, 1083
MboII GAAGA 4 cut(s) 74, 355, 733, 977
MfeI CAATTG 1 cut(s) 1173
MflI RGATCY 1 cut(s) 1083
MhlI GDGCHC 1 cut(s) 1106
MlsI TGGCCA 1 cut(s) 1017
MluI ACGCGT 1 cut(s) 293
MluNI TGGCCA 1 cut(s) 1017
MlyI GAGTC 1 cut(s) 1110
Mox20I TGGCCA 1 cut(s) 1017
MroXI GAANNNNTTC 2 cut(s) 246, 284
MscI TGGCCA 1 cut(s) 1017
MseI TTAA 6 cut(s) 68, 401, 558, 600, 792, 849
MslI CAYNNNNRTG 1 cut(s) 449
Msp20I TGGCCA 1 cut(s) 1017
MspI CCGG 1 cut(s) 1066
MspR9I CCNGG 2 cut(s) 650, 995
MunI CAATTG 1 cut(s) 1173
Mva1269I GAATGC 1 cut(s) 995
MvaI CCWGG 2 cut(s) 650, 995
MvnI CGCG 3 cut(s) 129, 295, 895
MwoI GCNNNNNNNGC 2 cut(s) 137, 1186
NdeI CATATG 1 cut(s) 122
NdeII GATC 6 cut(s) 3, 32, 252, 520, 808, 1083
NlaIII CATG 2 cut(s) 721, 1011
NlaIV GGNNCC 5 cut(s) 738, 869, 870, 1049, 1085
NsbI TGCGCA 1 cut(s) 731
NspI RCATGY 1 cut(s) 1011
NspV TTCGAA 1 cut(s) 942
OliI CACNNNNGTG 1 cut(s) 449
PaeI GCATGC 1 cut(s) 1011
PaeR7I CTCGAG 1 cut(s) 1105
PceI AGGCCT 1 cut(s) 1208
PcsI WCGNNNNNNNCGW 1 cut(s) 261
PctI GAATGC 1 cut(s) 995
PdmI GAANNNNTTC 2 cut(s) 246, 284
PfeI GAWTC 4 cut(s) 266, 527, 785, 968
PkrI GCNGC 6 cut(s) 128, 142, 394, 932, 1093, 1182
PleI GAGTC 1 cut(s) 1110
PpsI GAGTC 1 cut(s) 1110
PpuMI RGGWCCY 1 cut(s) 868
PshBI ATTAAT 3 cut(s) 68, 600, 849
Psp124BI GAGCTC 1 cut(s) 1106
Psp5II RGGWCCY 1 cut(s) 868
Psp6I CCWGG 2 cut(s) 648, 993
PspGI CCWGG 2 cut(s) 648, 993
PspN4I GGNNCC 5 cut(s) 738, 869, 870, 1049, 1085
PspPI GGNCC 2 cut(s) 215, 868
PspPPI RGGWCCY 1 cut(s) 868
PspXI VCTCGAGB 1 cut(s) 1105
PstI CTGCAG 2 cut(s) 451, 932
PsuI RGATCY 1 cut(s) 1083
RsaI GTAC 7 cut(s) 136, 200, 298, 347, 622, 1049, 1216
RsaNI GTAC 7 cut(s) 135, 199, 297, 346, 621, 1048, 1215
RseI CAYNNNNRTG 1 cut(s) 449
SacI GAGCTC 1 cut(s) 1106
SalI GTCGAC 1 cut(s) 902
SaqAI TTAA 6 cut(s) 68, 401, 558, 600, 792, 849
SatI GCNGC 6 cut(s) 127, 141, 393, 931, 1092, 1181
Sau3AI GATC 6 cut(s) 3, 32, 252, 520, 808, 1083
Sau96I GGNCC 2 cut(s) 215, 868
ScaI AGTACT 1 cut(s) 136
SchI GAGTC 1 cut(s) 1110
ScrFI CCNGG 2 cut(s) 650, 995
SduI GDGCHC 1 cut(s) 1106
SfaNI GCATC 3 cut(s) 66, 494, 988
SfcI CTRYAG 5 cut(s) 28, 146, 447, 741, 928
Sfr274I CTCGAG 1 cut(s) 1105
SfuI TTCGAA 1 cut(s) 942
SinI GGWCC 2 cut(s) 215, 868
SlaI CTCGAG 1 cut(s) 1105
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 2 cut(s) 1105, 1245
SmoI CTYRAG 2 cut(s) 1105, 1245
SpeI ACTAGT 1 cut(s) 572
SphI GCATGC 1 cut(s) 1011
SseBI AGGCCT 1 cut(s) 1208
SsiI CCGC 8 cut(s) 127, 392, 395, 483, 501, 1092, 1189, 1251
SspMI CTAG 3 cut(s) 573, 749, 774
SstI GAGCTC 1 cut(s) 1106
StuI AGGCCT 1 cut(s) 1208
StyD4I CCNGG 2 cut(s) 648, 993
StyI CCWWGG 2 cut(s) 1111, 1258
TaaI ACNGT 3 cut(s) 563, 595, 1147
TaiI ACGT 1 cut(s) 189
TaqI TCGA 6 cut(s) 255, 269, 903, 942, 1106, 1194
TatI WGTACW 2 cut(s) 134, 345
TauI GCSGC 3 cut(s) 129, 395, 1094
TfiI GAWTC 4 cut(s) 266, 527, 785, 968
Tru1I TTAA 6 cut(s) 68, 401, 558, 600, 792, 849
Tru9I TTAA 6 cut(s) 68, 401, 558, 600, 792, 849
TscAI CASTG 7 cut(s) 451, 456, 519, 598, 940, 1152, 1190
TseI GCWGC 3 cut(s) 140, 930, 1180
TspDTI ATGAA 7 cut(s) 80, 94, 675, 734, 777, 790, 1002
TspGWI ACGGA 2 cut(s) 188, 942
TspRI CASTG 7 cut(s) 451, 456, 519, 598, 940, 1152, 1190
VpaK11BI GGWCC 2 cut(s) 215, 868
VspI ATTAAT 3 cut(s) 68, 600, 849
XapI RAATTY 2 cut(s) 81, 915
XceI RCATGY 1 cut(s) 1011
XhoI CTCGAG 1 cut(s) 1105
XmiI GTMKAC 2 cut(s) 420, 903
XmnI GAANNNNTTC 2 cut(s) 246, 284
XspI CTAG 3 cut(s) 573, 749, 774
ZrmI AGTACT 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.