RLG00000024331

Wall-associated receptor kinase galacturonan-binding

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
34753607 .. 34770717
17111 bp
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UTR
Exon/CDS
Intron
RLM00000024331

Sequence Viewer

Length: 2301 bp
ATGCAATTGCTAGTTCAGCATATGGTTATGTTCATCATTCTGTTGTTATTTCACTGCCGCATAAGTAGAGCATCATCACCACCGAAGATAGCGAACGAGAATTGTACATCGCGGTGCGGAGGTGTTAACATCCCGTACCCTTTTGGCATTGGACCTAAAAACCATTGTTACTTTGACGAGTGGTACGAAATAGAATGCAACCTTTCTGTTCCAGTAGCGAAGCCGTTCTTGAGGCGTCTACAACTCGAGGTGCTGAGTGTTTCTGTTGAAAACGCCACGCTTCAGGTTACAAGCCCTATCACTTACTTTAGCTGCAAGGGGAAGCAATCTCGGCCAGCGGCAAATCTGACGGGAAGCCCTTTTATGTACTCTCTTCAAATTAACAGTTTCGTTGCAGTTAGTTGTGACTTGTTTGCCTCGCTGCGCACAGGTTCAAAGCATACTGTTGCTGGGTGCACGTCAACTTGTATTTCAGTTGCAATTCTCGATGTTGATATGTGTGAGTACGGCTTTAACTGTTGCCGGACTGCCCTTTCCCAAGATATCAATCATTTCAGCGTCGTACAAGAACCAGATGAAACAAGAAGAAATGCGACAGATTGCGAGGACTATGCATTCCTGGTTGACAAACAGTGGTTTGCAGACAATAAATCAGACTTCACAGCTATCAAGGGTATGGACGTCGTTCCTGTGATGTTAGACTGGAGCTTAAGCTTAGAAAATAATAGGTCATTAATCAAACAATTTGAAGCACTCCCCAGCTCGAAAGACCATAGGAGCCCGCATGACCCAACACCCACATGCGACAAAATGGAGGCTGTTCCGTCTTTCAATCACACATGGTATCGATGTCTTTGTCCGGTAGGCTTTGAAGGAAATCCGTACCTTCTCCAACGTTGTCAAGATAAAGATGAATGCAAGGATAGTAATCCGTGTGCGAGTCCTGACCCTAATATTACTACTGCATGGAATATTAAAGATGCCAAATGTAACAACACTGTCGGGGGTCATACATGCTACTCAGATAGAACAGGGGAAACCTGCGAAGTTTTTGCCATTGACACCGTTGCCAAGTGCTACAGAAGAAGTATGCCTCACTCACAGCTCAAGCCTATTCTCTATGGTATTGGTGCTGGTATTGGACTATTGTTTTTGCTTAGTGCTACATGGTGGGTGTACAAGTTTGTAAAAAAATGGAAAAACATTAAACGTAAGGAGATGTTTTACAAACGAAATGGTGGTTTATTGCTAGAGCAACAATTATCGTCAGGTGACATTAACATCGAGAGAATCAAATTGTTCAAATCGAAGGAGTTACAGAGGTCTACAAACAATTTCAATGCTGATAGAATTATTGGCCAAGGGGGGCAAGGTACTGTTTATAAAGGCATGTTAATGGATGGAAGAATTGTGGCTGTTAAAAAGTCCAAAATTGTAGACGAGGCAAAACTTTCAGAATTCATCAATGAGGTTGTCATTCTTTCTCAAATCAACCATAGAAACATCGTTCAACTCTTGGGTTGTTGTTTGGAGACGGAAGTTCCTCTTTTGGTATATGAATTTATCCCTAATGGAAACTTGTTTCAGTATATTCATGAACAGACCGAAGAGTTTCCACTTACATGGGAGATTCGTTTACGAATTGCTACAGAAATTGCAGGAGCTCTTTCCTACTTACATACATCAGCTTTGTTTCCCATTTATCATAGAGACATCAAGTCCACGAACATACTCTTAGATGACAAATACAGAGCAAAAATTGCAGACTTTGGAACTTCAAGGTTAGTTGCCATTGACCAAACTCACCTGACCACAAATGTACACGGCACATTTGGTTATTTGGATCCTGAGTACTACCAATCCAGCCAATTTACTGAGAAAAGTGACGTCTACAGCTTTGGAGTGGTGATTGTTGAGCTCTTGACCGGAAAAAAACCAGTAACAAGGTCAGCCGAAGACGAAATGTACAAAAGTCTTGCCACATATTTTATGGTTTCACTGCAGGAAGATTCTCTATTTGACATTCTTGATGCTCGAGTAGTGAATGAAGGCCCTAAAGATGGTATTTTGGCAGTCGCTAATCTTGCAAATCGATGCTTAAATTTGAATGGAAGAAAGCGTCCTACGATGAGAGAGGTCACAGCAGAGTTGGAGACCATCCAATTATCTGGGAAACCTATAGGCGCTCAACAAAACTGTGAAAAGGTTGAATTTGACCAAGATTATCAAATTGAGCAGTGGGGTGATGTTGTTTCTAGTTCAACCATGTCAACTTGGGAAGGTGCTCCAACTACATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

767

Amino Acids

86.34

Weight (kDa)

6.03

Isoelectric Point (pI)

43.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 97 3.9e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 447 - 714 4.5e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 448 - 717 1.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1383
AatII GACGTC 2 cut(s) 684, 1890
Acc16I TGCGCA 1 cut(s) 425
Acc36I ACCTGC 1 cut(s) 1049
AccI GTMKAC 4 cut(s) 238, 1325, 1437, 1890
AccII CGCG 1 cut(s) 112
AciI CCGC 5 cut(s) 58, 112, 117, 338, 782
AclI AACGTT 1 cut(s) 895
AclWI GGATC 2 cut(s) 1838, 1851
AcoI YGGCCR 2 cut(s) 332, 1357
AcsI RAATTY 4 cut(s) 1457, 1559, 2101, 2210
AcuI CTGAAG 1 cut(s) 266
AcyI GRCGYC 3 cut(s) 235, 681, 1887
AfiI CCNNNNNNNGG 1 cut(s) 2060
AflII CTTAAG 1 cut(s) 709
AhdI GACNNNNNGTC 1 cut(s) 1717
AjiI CACGTC 1 cut(s) 459
AjnI CCWGG 1 cut(s) 618
Alw21I GWGCWC 4 cut(s) 458, 1666, 1920, 2287
Alw26I GTCTC 3 cut(s) 1526, 1704, 2147
Alw44I GTGCAC 1 cut(s) 454
AlwI GGATC 2 cut(s) 1838, 1851
Ama87I CYCGRG 2 cut(s) 245, 2034
AoxI GGCC 3 cut(s) 332, 1357, 2050
ApaLI GTGCAC 1 cut(s) 454
ApeKI GCWGC 2 cut(s) 312, 421
ApoI RAATTY 4 cut(s) 1457, 1559, 2101, 2210
AseI ATTAAT 1 cut(s) 734
Asp700I GAANNNNTTC 2 cut(s) 224, 1611
AspLEI GCGC 2 cut(s) 426, 2186
AspS9I GGNCC 2 cut(s) 152, 2051
AsuHPI GGTGA 5 cut(s) 69, 1283, 1796, 1918, 2255
AvaI CYCGRG 2 cut(s) 245, 2034
AvaII GGWCC 1 cut(s) 152
BaeGI GKGCMC 1 cut(s) 458
BalI TGGCCA 1 cut(s) 1359
BamHI GGATCC 1 cut(s) 1843
BanII GRGCYC 3 cut(s) 782, 1666, 1920
BbsI GAAGAC 1 cut(s) 1962
Bbv12I GWGCWC 4 cut(s) 458, 1666, 1920, 2287
BbvI GCAGC 2 cut(s) 299, 408
BccI CCATC 3 cut(s) 1394, 2054, 2165
BceAI ACGGC 3 cut(s) 208, 523, 1840
BcgI CGANNNNNNTGC 4 cut(s) 593, 627, 1034, 1068
BciT130I CCWGG 1 cut(s) 620
BcoDI GTCTC 3 cut(s) 1526, 1704, 2147
BfaI CTAG 3 cut(s) 11, 1250, 2256
BfmI CTRYAG 5 cut(s) 1078, 1647, 1891, 2000, 2178
BfoI RGCGCY 1 cut(s) 2187
BfrI CTTAAG 1 cut(s) 709
BfuAI ACCTGC 1 cut(s) 1049
BisI GCNGC 4 cut(s) 58, 313, 339, 422
BlsI GCNGC 4 cut(s) 59, 314, 340, 423
BmcAI AGTACT 1 cut(s) 1853
Bme1390I CCNGG 1 cut(s) 620
Bme18I GGWCC 1 cut(s) 152
BmeRI GACNNNNNGTC 1 cut(s) 1717
BmeT110I CYCGRG 2 cut(s) 245, 2034
BmgBI CACGTC 1 cut(s) 459
BmgT120I GGNCC 2 cut(s) 152, 2051
BmiI GGNNCC 2 cut(s) 779, 1845
BmrFI CCNGG 1 cut(s) 620
BmsI GCATC 4 cut(s) 80, 970, 2020, 2084
BpiI GAAGAC 1 cut(s) 1962
BpmI CTGGAG 1 cut(s) 724
BpuEI CTTGAG 2 cut(s) 250, 1091
Bsa29I ATCGAT 2 cut(s) 847, 2092
BsaBI GATNNNNATC 2 cut(s) 546, 927
BsaHI GRCGYC 3 cut(s) 235, 681, 1887
BsaI GGTCTC 1 cut(s) 2147
BsaJI CCNNGG 1 cut(s) 1360
BsaWI WCCGGW 2 cut(s) 859, 1925
Bsc4I CCNNNNNNNGG 1 cut(s) 2060
Bse1I ACTGG 3 cut(s) 212, 707, 1937
Bse8I GATNNNNATC 2 cut(s) 546, 927
BseBI CCWGG 1 cut(s) 620
BseCI ATCGAT 2 cut(s) 847, 2092
BseDI CCNNGG 1 cut(s) 1360
BseGI GGATG 3 cut(s) 129, 1405, 2157
BseJI GATNNNNATC 2 cut(s) 546, 927
BseLI CCNNNNNNNGG 1 cut(s) 2060
BseMII CTCAG 4 cut(s) 245, 1035, 1839, 1866
BseNI ACTGG 3 cut(s) 212, 707, 1937
BseSI GKGCMC 1 cut(s) 458
BseXI GCAGC 2 cut(s) 299, 408
BseYI CCCAGC 2 cut(s) 449, 758
Bsh1236I CGCG 1 cut(s) 112
BshFI GGCC 3 cut(s) 334, 1359, 2052
BshVI ATCGAT 2 cut(s) 847, 2092
BsiHKAI GWGCWC 4 cut(s) 458, 1666, 1920, 2287
BsiHKCI CYCGRG 2 cut(s) 245, 2034
BsiSI CCGG 3 cut(s) 523, 860, 1926
BslI CCNNNNNNNGG 1 cut(s) 2060
BsmAI GTCTC 3 cut(s) 1526, 1704, 2147
BsmBI CGTCTC 1 cut(s) 1526
BsmI GAATGC 3 cut(s) 200, 614, 920
BsnI GGCC 3 cut(s) 334, 1359, 2052
Bso31I GGTCTC 1 cut(s) 2147
BsoBI CYCGRG 2 cut(s) 245, 2034
Bsp1286I GDGCHC 5 cut(s) 458, 782, 1666, 1920, 2287
Bsp1407I TGTACA 4 cut(s) 104, 1176, 1819, 1965
Bsp143I GATC 1 cut(s) 1843
BspACI CCGC 5 cut(s) 58, 112, 117, 338, 782
BspANI GGCC 3 cut(s) 334, 1359, 2052
BspCNI CTCAG 4 cut(s) 246, 1034, 1840, 1867
BspDI ATCGAT 2 cut(s) 847, 2092
BspFNI CGCG 1 cut(s) 112
BspHI TCATGA 2 cut(s) 1594, 2297
BspLI GGNNCC 2 cut(s) 779, 1845
BspMAI CTGCAG 1 cut(s) 2004
BspMI ACCTGC 1 cut(s) 1049
BspPI GGATC 2 cut(s) 1838, 1851
BspTI CTTAAG 1 cut(s) 709
BspTNI GGTCTC 1 cut(s) 2147
BsrGI TGTACA 4 cut(s) 104, 1176, 1819, 1965
BsrI ACTGG 3 cut(s) 212, 707, 1937
BssECI CCNNGG 1 cut(s) 1360
BssMI GATC 1 cut(s) 1843
BssNI GRCGYC 3 cut(s) 235, 681, 1887
BssT1I CCWWGG 1 cut(s) 1360
Bst2UI CCWGG 1 cut(s) 620
Bst4CI ACNGT 8 cut(s) 386, 445, 518, 633, 1000, 1066, 1378, 2198
Bst6I CTCTTC 2 cut(s) 378, 1602
BstACI GRCGYC 3 cut(s) 235, 681, 1887
BstAFI CTTAAG 1 cut(s) 709
BstAPI GCANNNNNTGC 1 cut(s) 1760
BstAUI TGTACA 4 cut(s) 104, 1176, 1819, 1965
BstC8I GCNNGC 2 cut(s) 336, 782
BstDEI CTNAG 7 cut(s) 254, 715, 1021, 1157, 1735, 1848, 1875
BstF5I GGATG 3 cut(s) 129, 1405, 2157
BstFNI CGCG 1 cut(s) 112
BstH2I RGCGCY 1 cut(s) 2187
BstHHI GCGC 2 cut(s) 426, 2186
BstKTI GATC 1 cut(s) 1846
BstMAI GTCTC 3 cut(s) 1526, 1704, 2147
BstMBI GATC 1 cut(s) 1843
BstMWI GCNNNNNNNGC 4 cut(s) 16, 331, 1760, 2084
BstNI CCWGG 1 cut(s) 620
BstNSI RCATGY 3 cut(s) 804, 1017, 1393
BstSCI CCNGG 1 cut(s) 618
BstSFI CTRYAG 5 cut(s) 1078, 1647, 1891, 2000, 2178
BstSLI GKGCMC 1 cut(s) 458
BstUI CGCG 1 cut(s) 112
BstV1I GCAGC 2 cut(s) 299, 408
BstV2I GAAGAC 1 cut(s) 1962
BstX2I RGATCY 1 cut(s) 1843
BstXI CCANNNNNNTGG 2 cut(s) 1623, 2168
BstYI RGATCY 1 cut(s) 1843
Bsu15I ATCGAT 2 cut(s) 847, 2092
BsuRI GGCC 3 cut(s) 334, 1359, 2052
BsuTUI ATCGAT 2 cut(s) 847, 2092
BtgZI GCGATG 1 cut(s) 93
BtrI CACGTC 1 cut(s) 459
BtsCI GGATG 3 cut(s) 129, 1405, 2157
BtsI GCAGTG 3 cut(s) 52, 1997, 2243
BtsIMutI CAGTG 5 cut(s) 52, 638, 996, 1997, 2243
BveI ACCTGC 1 cut(s) 1049
Cac8I GCNNGC 2 cut(s) 336, 782
CciI TCATGA 2 cut(s) 1594, 2297
CfoI GCGC 2 cut(s) 426, 2186
Cfr13I GGNCC 2 cut(s) 152, 2051
ClaI ATCGAT 2 cut(s) 847, 2092
CseI GACGC 3 cut(s) 224, 547, 2108
DdeI CTNAG 7 cut(s) 254, 715, 1021, 1157, 1735, 1848, 1875
DpnI GATC 1 cut(s) 1845
DpnII GATC 1 cut(s) 1843
DriI GACNNNNNGTC 1 cut(s) 1717
EaeI YGGCCR 2 cut(s) 332, 1357
Eam1104I CTCTTC 2 cut(s) 378, 1602
Eam1105I GACNNNNNGTC 1 cut(s) 1717
EarI CTCTTC 2 cut(s) 378, 1602
Ecl136II GAGCTC 2 cut(s) 1664, 1918
Eco130I CCWWGG 1 cut(s) 1360
Eco24I GRGCYC 3 cut(s) 782, 1666, 1920
Eco31I GGTCTC 1 cut(s) 2147
Eco32I GATATC 1 cut(s) 544
Eco47I GGWCC 1 cut(s) 152
Eco53kI GAGCTC 2 cut(s) 1664, 1918
Eco57I CTGAAG 1 cut(s) 266
Eco88I CYCGRG 2 cut(s) 245, 2034
EcoICRI GAGCTC 2 cut(s) 1664, 1918
EcoO109I RGGNCCY 1 cut(s) 2051
EcoRI GAATTC 1 cut(s) 1457
EcoRII CCWGG 1 cut(s) 618
EcoRV GATATC 1 cut(s) 544
EcoT14I CCWWGG 1 cut(s) 1360
EcoT22I ATGCAT 1 cut(s) 616
EcoT38I GRGCYC 3 cut(s) 782, 1666, 1920
ErhI CCWWGG 1 cut(s) 1360
Esp3I CGTCTC 1 cut(s) 1526
FalI AAGNNNNNCTT 4 cut(s) 212, 244, 1530, 1562
FauI CCCGC 1 cut(s) 789
FauNDI CATATG 1 cut(s) 21
FblI GTMKAC 4 cut(s) 238, 1325, 1437, 1890
Fnu4HI GCNGC 4 cut(s) 58, 313, 339, 422
FokI GGATG 3 cut(s) 116, 1412, 2144
FriOI GRGCYC 3 cut(s) 782, 1666, 1920
Fsp4HI GCNGC 4 cut(s) 58, 313, 339, 422
FspBI CTAG 3 cut(s) 11, 1250, 2256
FspI TGCGCA 1 cut(s) 425
GlaI GCGC 2 cut(s) 425, 2185
GluI GCNGC 4 cut(s) 58, 313, 339, 422
GsaI CCCAGC 2 cut(s) 453, 762
GsuI CTGGAG 1 cut(s) 724
HaeII RGCGCY 1 cut(s) 2187
HaeIII GGCC 3 cut(s) 334, 1359, 2052
HapII CCGG 3 cut(s) 523, 860, 1926
HgaI GACGC 3 cut(s) 224, 547, 2108
HhaI GCGC 2 cut(s) 426, 2186
Hin1I GRCGYC 3 cut(s) 235, 681, 1887
Hin6I GCGC 2 cut(s) 424, 2184
HinP1I GCGC 2 cut(s) 424, 2184
HincII GTYRAC 4 cut(s) 127, 462, 625, 2271
HindII GTYRAC 4 cut(s) 127, 462, 625, 2271
HindIII AAGCTT 1 cut(s) 712
HinfI GANTC 4 cut(s) 940, 1290, 1630, 2009
HpaI GTTAAC 1 cut(s) 127
HpaII CCGG 3 cut(s) 523, 860, 1926
HphI GGTGA 5 cut(s) 69, 1283, 1796, 1918, 2255
Hpy188I TCNGA 4 cut(s) 348, 655, 1024, 1456
Hpy99I CGWCG 2 cut(s) 563, 686
HpyAV CCTTC 5 cut(s) 866, 896, 1303, 2042, 2273
HpyCH4III ACNGT 8 cut(s) 386, 445, 518, 633, 1000, 1066, 1378, 2198
HpyCH4IV ACGT 5 cut(s) 458, 681, 895, 1210, 1887
HpyF10VI GCNNNNNNNGC 4 cut(s) 16, 331, 1760, 2084
HpyF3I CTNAG 7 cut(s) 254, 715, 1021, 1157, 1735, 1848, 1875
HpySE526I ACGT 5 cut(s) 458, 681, 895, 1210, 1887
Hsp92I GRCGYC 3 cut(s) 235, 681, 1887
HspAI GCGC 2 cut(s) 424, 2184
KspAI GTTAAC 1 cut(s) 127
Kzo9I GATC 1 cut(s) 1843
LmnI GCTCC 4 cut(s) 705, 777, 1661, 2290
Lsp1109I GCAGC 2 cut(s) 299, 408
LweI GCATC 4 cut(s) 80, 970, 2020, 2084
MaeI CTAG 3 cut(s) 11, 1250, 2256
MaeII ACGT 5 cut(s) 458, 681, 895, 1210, 1887
MaeIII GTNAC 9 cut(s) 167, 286, 404, 989, 1271, 1314, 1883, 1939, 2137
MalI GATC 1 cut(s) 1845
MboI GATC 1 cut(s) 1843
MboII GAAGA 9 cut(s) 97, 365, 597, 1095, 1416, 1619, 1967, 2018, 2124
MfeI CAATTG 1 cut(s) 5
MflI RGATCY 1 cut(s) 1843
MhlI GDGCHC 5 cut(s) 458, 782, 1666, 1920, 2287
MlsI TGGCCA 1 cut(s) 1359
MluNI TGGCCA 1 cut(s) 1359
MlyI GAGTC 1 cut(s) 949
MmeI TCCRAC 2 cut(s) 916, 2130
Mox20I TGGCCA 1 cut(s) 1359
Mph1103I ATGCAT 1 cut(s) 616
MroXI GAANNNNTTC 2 cut(s) 224, 1611
MscI TGGCCA 1 cut(s) 1359
MslI CAYNNNNRTG 4 cut(s) 112, 799, 1394, 1621
Msp20I TGGCCA 1 cut(s) 1359
MspA1I CMGCKG 1 cut(s) 338
MspCI CTTAAG 1 cut(s) 709
MspI CCGG 3 cut(s) 523, 860, 1926
MspR9I CCNGG 1 cut(s) 620
MunI CAATTG 1 cut(s) 5
Mva1269I GAATGC 3 cut(s) 200, 614, 920
MvaI CCWGG 1 cut(s) 620
MvnI CGCG 1 cut(s) 112
MwoI GCNNNNNNNGC 4 cut(s) 16, 331, 1760, 2084
NdeI CATATG 1 cut(s) 21
NdeII GATC 1 cut(s) 1843
NlaIV GGNNCC 2 cut(s) 779, 1845
NmeAIII GCCGAG 1 cut(s) 310
NmuCI GTSAC 4 cut(s) 404, 1271, 1883, 2137
NsbI TGCGCA 1 cut(s) 425
NsiI ATGCAT 1 cut(s) 616
NspI RCATGY 3 cut(s) 804, 1017, 1393
PaeR7I CTCGAG 2 cut(s) 245, 2034
PagI TCATGA 2 cut(s) 1594, 2297
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 3 cut(s) 200, 614, 920
PdmI GAANNNNTTC 2 cut(s) 224, 1611
PfeI GAWTC 3 cut(s) 1290, 1630, 2009
PkrI GCNGC 4 cut(s) 59, 314, 340, 423
PleI GAGTC 1 cut(s) 948
PpsI GAGTC 1 cut(s) 948
PshBI ATTAAT 1 cut(s) 734
PsiI TTATAA 1 cut(s) 1383
Psp124BI GAGCTC 2 cut(s) 1666, 1920
Psp1406I AACGTT 1 cut(s) 895
Psp6I CCWGG 1 cut(s) 618
PspFI CCCAGC 2 cut(s) 449, 758
PspGI CCWGG 1 cut(s) 618
PspN4I GGNNCC 2 cut(s) 779, 1845
PspPI GGNCC 2 cut(s) 152, 2051
PspXI VCTCGAGB 2 cut(s) 245, 2034
PstI CTGCAG 1 cut(s) 2004
PsuI RGATCY 1 cut(s) 1843
RseI CAYNNNNRTG 4 cut(s) 112, 799, 1394, 1621
SacI GAGCTC 2 cut(s) 1666, 1920
SatI GCNGC 4 cut(s) 58, 313, 339, 422
Sau3AI GATC 1 cut(s) 1843
Sau96I GGNCC 2 cut(s) 152, 2051
ScaI AGTACT 1 cut(s) 1853
SchI GAGTC 1 cut(s) 949
ScrFI CCNGG 1 cut(s) 620
SduI GDGCHC 5 cut(s) 458, 782, 1666, 1920, 2287
SfaNI GCATC 4 cut(s) 80, 970, 2020, 2084
SfcI CTRYAG 5 cut(s) 1078, 1647, 1891, 2000, 2178
Sfr274I CTCGAG 2 cut(s) 245, 2034
SinI GGWCC 1 cut(s) 152
SlaI CTCGAG 2 cut(s) 245, 2034
SmiMI CAYNNNNRTG 4 cut(s) 112, 799, 1394, 1621
SmlI CTYRAG 5 cut(s) 229, 245, 709, 1106, 2034
SmoI CTYRAG 5 cut(s) 229, 245, 709, 1106, 2034
SsiI CCGC 5 cut(s) 58, 112, 117, 338, 782
SspI AATATT 2 cut(s) 955, 973
SspMI CTAG 3 cut(s) 11, 1250, 2256
SstI GAGCTC 2 cut(s) 1666, 1920
StyD4I CCNGG 1 cut(s) 618
StyI CCWWGG 1 cut(s) 1360
TaaI ACNGT 8 cut(s) 386, 445, 518, 633, 1000, 1066, 1378, 2198
TaiI ACGT 5 cut(s) 461, 684, 898, 1213, 1890
TaqI TCGA 8 cut(s) 246, 486, 764, 847, 1284, 1307, 2035, 2092
TaqII GACCGA 1 cut(s) 1619
TatI WGTACW 6 cut(s) 104, 366, 1176, 1819, 1851, 1965
TauI GCSGC 2 cut(s) 60, 341
TfiI GAWTC 3 cut(s) 1290, 1630, 2009
TscAI CASTG 5 cut(s) 59, 638, 1003, 2004, 2243
TseFI GTSAC 4 cut(s) 404, 1271, 1883, 2137
TseI GCWGC 2 cut(s) 312, 421
Tsp45I GTSAC 4 cut(s) 404, 1271, 1883, 2137
TspDTI ATGAA 8 cut(s) 22, 591, 927, 1450, 1572, 1583, 1611, 2061
TspGWI ACGGA 4 cut(s) 813, 870, 921, 1550
TspRI CASTG 5 cut(s) 59, 638, 1003, 2004, 2243
Vha464I CTTAAG 1 cut(s) 709
VneI GTGCAC 1 cut(s) 454
VpaK11BI GGWCC 1 cut(s) 152
VspI ATTAAT 1 cut(s) 734
XapI RAATTY 4 cut(s) 1457, 1559, 2101, 2210
XceI RCATGY 3 cut(s) 804, 1017, 1393
XcmI CCANNNNNNNNNTGG 1 cut(s) 1987
XhoI CTCGAG 2 cut(s) 245, 2034
XmiI GTMKAC 4 cut(s) 238, 1325, 1437, 1890
XmnI GAANNNNTTC 2 cut(s) 224, 1611
XspI CTAG 3 cut(s) 11, 1250, 2256
ZraI GACGTC 2 cut(s) 682, 1888
ZrmI AGTACT 1 cut(s) 1853
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.